CmaCh18G013270 (gene) Cucurbita maxima (Rimu)

NameCmaCh18G013270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRWP-RK domain-containing transcription factor
LocationCma_Chr18 : 10140319 .. 10141305 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGGATGGCCATATCACCAACATCTTTTCCCCTTCGACCACGAGTAAGAACAAACCATCTAAATTGATAGATACAGTTCAATTTGTTAACACAAGTCTAAAGGATTCAACTTTACGTGATGGGTTCATTTTAAATTGATTTGTCTTTGATGGGTCTTGCTTAATTTTGGTTTTTTTCATTTCCCACAGAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTTTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGTCTGAAATTTTGTCGTTGGACAAACACATGATACCGGTTACACCACTTTACGAGGAGGACATGGTGGCCGTCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAATTGGAAAGAAGAAGAAGAAGAGTGTGAAAAGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAAAGAGTTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAGTGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTAATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGTTTGTATGTATACACATCCATCATTCTAAATGTCTATTGATTCAAGTTCTTAGGACGCTCAACTCGGTGTAATTTGGAAGTGCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAAATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGTTCTTCACTAA

mRNA sequence

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGGATGGCCATATCACCAACATCTTTTCCCCTTCGACCACGAAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTTTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGTCTGAAATTTTGTCGTTGGACAAACACATGATACCGGTTACACCACTTTACGAGGAGGACATGGTGGCCGTCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAATTGGAAAGAAGAAGAAGAAGAGTGTGAAAAGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAAAGAGTTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAGTGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTAATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAAATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGTTCTTCACTAA

Coding sequence (CDS)

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGGATGGCCATATCACCAACATCTTTTCCCCTTCGACCACGAAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTTTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGTCTGAAATTTTGTCGTTGGACAAACACATGATACCGGTTACACCACTTTACGAGGAGGACATGGTGGCCGTCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAATTGGAAAGAAGAAGAAGAAGAGTGTGAAAAGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAAAGAGTTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAGTGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTAATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAAATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGTTCTTCACTAA

Protein sequence

MEPSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELESEILSLDKHMIPVTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRRSNVAVLH
BLAST of CmaCh18G013270 vs. Swiss-Prot
Match: RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 80/222 (36.04%), Postives = 126/222 (56.76%), Query Frame = 1

Query: 31  ELPPLD----VDGSFDFNSLSLPFHWDDISELESEI-----LSLDKHMIPVTPLYEEDMV 90
           +LPPLD    ++       L   FH++   +    I     +  D H++   P +  D  
Sbjct: 52  KLPPLDSLLDMEDLKPNAGLHFQFHYNSFEDFFENIEVDNTIPSDIHLLTQEPYFSSD-- 111

Query: 91  AVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRKSSV 150
               +     + +++D +              +SN K E+   +K+  L     +++   
Sbjct: 112 ----SSSSSPLAIQNDGL--------------ISNVKVEKVTVKKKRNL----KKKRQDK 171

Query: 151 LGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGL 210
           L + EI++ F  PI +AAK ++VGLTVLK+RCREL I RWPHRKLKSLNSLI N++ +G+
Sbjct: 172 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 231

Query: 211 TNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
             E+K LEEH+ L+E+ P+ +L+  T++LRQACFKANYK+++
Sbjct: 232 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRK 249

BLAST of CmaCh18G013270 vs. Swiss-Prot
Match: RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.7e-27
Identity = 84/231 (36.36%), Postives = 131/231 (56.71%), Query Frame = 1

Query: 40  SFDFNSLSLP-FHWD-DISELE----SEILSLDKHMIPVT---PLYEEDMVAVDETKPER 99
           SFD +SLS P F W+ D+  L+    S+        +P+    PL E+ + +        
Sbjct: 20  SFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSEDVLNSYSSASWNE 79

Query: 100 MVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRKSS----VLGLEE 159
             + + D  S E +     ++      K  E   E  VR+I       +S     L  E 
Sbjct: 80  TEQNRGDGASSEKKRENGTVKETTKKRKINERHREHSVRIISDITTYTTSSAPTTLSKET 139

Query: 160 IQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEM------- 219
           + ++F++PIT+AA A++VGLT+LKRRCREL I RWPHRKL SLN+LI+NV+E+       
Sbjct: 140 VSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQKMEGEE 199

Query: 220 ---GLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRRSNV 248
               L + ++ LE+ KR +E+LP+++   +T+RLRQACFKAN+K+K++ ++
Sbjct: 200 NAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSL 250

BLAST of CmaCh18G013270 vs. Swiss-Prot
Match: RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.3e-26
Identity = 59/120 (49.17%), Postives = 86/120 (71.67%), Query Frame = 1

Query: 139 SSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQE 198
           S  L  E I  +F++PIT+AA+ +++GLT+LK+RCREL I RWPHRKL SL  LI+NV+E
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 199 M----------GLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRRSNVA 249
           +           L N ++ LE+ K+ +E+LP++    +T+RLRQACFKAN+K+KRRS ++
Sbjct: 185 LEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRRSGMS 244

BLAST of CmaCh18G013270 vs. Swiss-Prot
Match: RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 63/169 (37.28%), Postives = 107/169 (63.31%), Query Frame = 1

Query: 96  DDDMSRELQEVTRMIETGLSNWKE-------EEEECEKRVRLIMRNGRRKSSVLG---LE 155
           ++ +   L E++R    G  N ++         +E   + R+IM+   R+  V+     E
Sbjct: 103 NNQVEPNLDEISRTNTMGDPNMEQILHEDVNTMKEKTSQKRIIMKRRYREDGVINNMSRE 162

Query: 156 EIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEM------ 215
            ++++F++PIT+AAK +++G+T+LK+RCREL I RWPHRKL SLN+LI N++++      
Sbjct: 163 MMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKG 222

Query: 216 -----GLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
                 L N ++ LE  K+++EE+P+++   +T+RLRQACFKA YK++R
Sbjct: 223 RTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRR 271

BLAST of CmaCh18G013270 vs. Swiss-Prot
Match: RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-16
Identity = 66/221 (29.86%), Postives = 112/221 (50.68%), Query Frame = 1

Query: 53  DDISELESEILSLDKHMIPVTPLYEEDMVAV--------DETKPERMVKLKD-----DDM 112
           +DI  L +E+  + +  +  + +YEE+  +         D  KP ++V  +D     D  
Sbjct: 138 EDIPNLANELKFISE--LKPSKIYEEEQCSSSTEGYYNSDLPKPRKLVLKQDLNCLPDSE 197

Query: 113 SRELQEVTRMIE-TGLSNWKEEEEECEKRVRLIMRNGRRKS---SVLGLEEIQKHFHIPI 172
           +   + V    E +   N K E+ E + +  ++ +  R  S   + L LEE+ K+F + I
Sbjct: 198 TESEESVNEKTEHSEFENDKTEQSESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTI 257

Query: 173 TEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQE-------------MGLT 232
            EA++ + VGLTVLK++CRE  I RWPHRK+KSL+ LI ++Q              M + 
Sbjct: 258 VEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVA 317

Query: 233 NEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
            + + LE  KR + + P M++   T++ RQ  FK  ++  R
Sbjct: 318 KKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

BLAST of CmaCh18G013270 vs. TrEMBL
Match: A0A0A0L6Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 9.0e-55
Identity = 141/280 (50.36%), Postives = 173/280 (61.79%), Query Frame = 1

Query: 3   PSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLS--LPFHWDD--ISEL 62
           P T  +   FDF W  H+ LFPF +E  ELPPLD D   D NS    L FH  D  + E 
Sbjct: 5   PQTFHNIPQFDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 64

Query: 63  ESEILSLDKHMIPVTPL--------------------YEEDMVAVDETKPERMVKLKDDD 122
           ESE LS +   I    L                     EE+    +E + E   + ++++
Sbjct: 65  ESEFLSREMDEIERKGLPSSTWKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 124

Query: 123 MSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNG----RRKSSVLGLEEIQKHFHIP 182
              E +E     E      +EEEEE EKR+RL+  N     R++S VLGLEEI+K++HIP
Sbjct: 125 EEEEEEEEEEEEEEEEEEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIKKYYHIP 184

Query: 183 ITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRL 242
           I+EAAK M+VGLTVLKRRCR+LNIMRWPHRKLKS NSLI NV+EMGLTNE+KGLEE KRL
Sbjct: 185 ISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRL 244

Query: 243 VEELPNMDLTHRTRRLRQACFKANYKKKRR---SNVAVLH 252
           + E PNMDLTH T+RLRQACFK  Y+K RR   +N+A LH
Sbjct: 245 LVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLH 283

BLAST of CmaCh18G013270 vs. TrEMBL
Match: E5GBA6_CUCME (Transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.6e-54
Identity = 136/252 (53.97%), Postives = 162/252 (64.29%), Query Frame = 1

Query: 12  FDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELESEILSLDKHMIP 71
           FDF W  H+ LFP  +E  ELPPLD D   D NS S                        
Sbjct: 15  FDFEW-LHEDLFPLHNELDELPPLDNDELLDVNSRS------------------------ 74

Query: 72  VTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEE-----CEK 131
           + P + +D           +++   + +SREL+ V        S WKEEEEE      EK
Sbjct: 75  LLPFHLDD---------NDVLEFDSEFLSRELEMVEIERNGFSSTWKEEEEEEEEEEGEK 134

Query: 132 RVRLIMRNG---RRKSS-VLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWP 191
           R+RL+  N    RRK S VLGLEEI+K+FHIPI++AAK M+VGLTVLKRRCR+LNIMRWP
Sbjct: 135 RLRLMGNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWP 194

Query: 192 HRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKK 251
           HRK KSLNSLI NV+EMGLTNE+KGLEEHKRL+EE+PNMDLTH  +RLRQACFKANYKK 
Sbjct: 195 HRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKN 232

BLAST of CmaCh18G013270 vs. TrEMBL
Match: B9IDP6_POPTR (RWP-RK domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s01410g PE=4 SV=2)

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-38
Identity = 87/132 (65.91%), Postives = 112/132 (84.85%), Query Frame = 1

Query: 115 SNWKEEEEECEKRVRLIMRNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCR 174
           S+ KEEEEE E+  ++   +GR++S  LGLEEIQKHF++PIT+AA+ M VGLTVLK+RCR
Sbjct: 124 SSVKEEEEEEEESRKM---SGRKRSVALGLEEIQKHFNMPITQAAREMKVGLTVLKKRCR 183

Query: 175 ELNIMRWPHRKLKSLNSLITNVQEMGLTN-EIKGLEEHKRLVEELPNMDLTHRTRRLRQA 234
           EL IMRWPHRK+KSLNSLI NV+EMGL+  +   LEEHKRL+E+LP+++LT RT++LRQA
Sbjct: 184 ELKIMRWPHRKIKSLNSLINNVKEMGLSEYDTIMLEEHKRLIEKLPDLELTERTKKLRQA 243

Query: 235 CFKANYKKKRRS 246
           CFKANYK++R S
Sbjct: 244 CFKANYKRRRLS 252

BLAST of CmaCh18G013270 vs. TrEMBL
Match: A0A067JSK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23923 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38
Identity = 105/210 (50.00%), Postives = 136/210 (64.76%), Query Frame = 1

Query: 40  SFDFNSLSLPFHWDDISELESEILSLDKHMIPVTPLYEEDMVAVDETKPERM-----VKL 99
           SFD + L+L   +  +SE             P+   +E D + +   K         + L
Sbjct: 20  SFDTDWLNLDDTFQKVSEFP-----------PLESFFELDSLTLPHYKNYGFEGFEEINL 79

Query: 100 KDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRKSSVLGLEEIQKHFHIP 159
             DD S    + T +++     + E  EE E+R    +RNGR+ S  L +EEI+K+F +P
Sbjct: 80  DIDDYS--FLDSTLLLDNPYDRYCENVEE-ERR----LRNGRKMSVPLEMEEIKKYFDLP 139

Query: 160 ITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRL 219
           IT+AAK M+VGLTVLK+RCRELNIMRWPHRKLKSLNSLI NV+EMGL NEI  LEE KRL
Sbjct: 140 ITKAAKEMNVGLTVLKKRCRELNIMRWPHRKLKSLNSLINNVKEMGLNNEIAMLEEDKRL 199

Query: 220 VEELPNMDLTHRTRRLRQACFKANYKKKRR 245
           VE++P+ +LT RT+RLRQACFKANYKKKR+
Sbjct: 200 VEDVPDTELTERTKRLRQACFKANYKKKRK 211

BLAST of CmaCh18G013270 vs. TrEMBL
Match: A0A022PTG4_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a025452mg PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 1

Query: 133 RNG--RRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLN 192
           RNG  R KSS L LEEI+KHFHIPIT+AAK ++VGLTVLK+RCRELNI RWPHRK+KSL 
Sbjct: 150 RNGATRYKSSSLKLEEIKKHFHIPITKAAKELNVGLTVLKKRCRELNITRWPHRKIKSLK 209

Query: 193 SLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
            LI NV+E+GLT+EI+ LEEHKR+VE LP M+LT RT++LRQACFKANYKK+R
Sbjct: 210 CLIRNVRELGLTSEIEMLEEHKRMVEMLPEMELTERTKKLRQACFKANYKKRR 262

BLAST of CmaCh18G013270 vs. TAIR10
Match: AT5G53040.1 (AT5G53040.1 RWP-RK domain-containing protein)

HSP 1 Score: 128.3 bits (321), Expect = 6.9e-30
Identity = 80/222 (36.04%), Postives = 126/222 (56.76%), Query Frame = 1

Query: 31  ELPPLD----VDGSFDFNSLSLPFHWDDISELESEI-----LSLDKHMIPVTPLYEEDMV 90
           +LPPLD    ++       L   FH++   +    I     +  D H++   P +  D  
Sbjct: 52  KLPPLDSLLDMEDLKPNAGLHFQFHYNSFEDFFENIEVDNTIPSDIHLLTQEPYFSSD-- 111

Query: 91  AVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRKSSV 150
               +     + +++D +              +SN K E+   +K+  L     +++   
Sbjct: 112 ----SSSSSPLAIQNDGL--------------ISNVKVEKVTVKKKRNL----KKKRQDK 171

Query: 151 LGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGL 210
           L + EI++ F  PI +AAK ++VGLTVLK+RCREL I RWPHRKLKSLNSLI N++ +G+
Sbjct: 172 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 231

Query: 211 TNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
             E+K LEEH+ L+E+ P+ +L+  T++LRQACFKANYK+++
Sbjct: 232 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRK 249

BLAST of CmaCh18G013270 vs. TAIR10
Match: AT1G74480.1 (AT1G74480.1 RWP-RK domain-containing protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-28
Identity = 84/231 (36.36%), Postives = 131/231 (56.71%), Query Frame = 1

Query: 40  SFDFNSLSLP-FHWD-DISELE----SEILSLDKHMIPVT---PLYEEDMVAVDETKPER 99
           SFD +SLS P F W+ D+  L+    S+        +P+    PL E+ + +        
Sbjct: 20  SFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSEDVLNSYSSASWNE 79

Query: 100 MVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRKSS----VLGLEE 159
             + + D  S E +     ++      K  E   E  VR+I       +S     L  E 
Sbjct: 80  TEQNRGDGASSEKKRENGTVKETTKKRKINERHREHSVRIISDITTYTTSSAPTTLSKET 139

Query: 160 IQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEM------- 219
           + ++F++PIT+AA A++VGLT+LKRRCREL I RWPHRKL SLN+LI+NV+E+       
Sbjct: 140 VSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQKMEGEE 199

Query: 220 ---GLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRRSNV 248
               L + ++ LE+ KR +E+LP+++   +T+RLRQACFKAN+K+K++ ++
Sbjct: 200 NAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSL 250

BLAST of CmaCh18G013270 vs. TAIR10
Match: AT1G18790.1 (AT1G18790.1 RWP-RK domain-containing protein)

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 59/120 (49.17%), Postives = 86/120 (71.67%), Query Frame = 1

Query: 139 SSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQE 198
           S  L  E I  +F++PIT+AA+ +++GLT+LK+RCREL I RWPHRKL SL  LI+NV+E
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 199 M----------GLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRRSNVA 249
           +           L N ++ LE+ K+ +E+LP++    +T+RLRQACFKAN+K+KRRS ++
Sbjct: 185 LEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRRSGMS 244

BLAST of CmaCh18G013270 vs. TAIR10
Match: AT5G66990.1 (AT5G66990.1 RWP-RK domain-containing protein)

HSP 1 Score: 111.7 bits (278), Expect = 6.6e-25
Identity = 63/169 (37.28%), Postives = 107/169 (63.31%), Query Frame = 1

Query: 96  DDDMSRELQEVTRMIETGLSNWKE-------EEEECEKRVRLIMRNGRRKSSVLG---LE 155
           ++ +   L E++R    G  N ++         +E   + R+IM+   R+  V+     E
Sbjct: 103 NNQVEPNLDEISRTNTMGDPNMEQILHEDVNTMKEKTSQKRIIMKRRYREDGVINNMSRE 162

Query: 156 EIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEM------ 215
            ++++F++PIT+AAK +++G+T+LK+RCREL I RWPHRKL SLN+LI N++++      
Sbjct: 163 MMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKG 222

Query: 216 -----GLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
                 L N ++ LE  K+++EE+P+++   +T+RLRQACFKA YK++R
Sbjct: 223 RTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRR 271

BLAST of CmaCh18G013270 vs. TAIR10
Match: AT4G35590.1 (AT4G35590.1 RWP-RK domain-containing protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-17
Identity = 66/221 (29.86%), Postives = 112/221 (50.68%), Query Frame = 1

Query: 53  DDISELESEILSLDKHMIPVTPLYEEDMVAV--------DETKPERMVKLKD-----DDM 112
           +DI  L +E+  + +  +  + +YEE+  +         D  KP ++V  +D     D  
Sbjct: 138 EDIPNLANELKFISE--LKPSKIYEEEQCSSSTEGYYNSDLPKPRKLVLKQDLNCLPDSE 197

Query: 113 SRELQEVTRMIE-TGLSNWKEEEEECEKRVRLIMRNGRRKS---SVLGLEEIQKHFHIPI 172
           +   + V    E +   N K E+ E + +  ++ +  R  S   + L LEE+ K+F + I
Sbjct: 198 TESEESVNEKTEHSEFENDKTEQSESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTI 257

Query: 173 TEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQE-------------MGLT 232
            EA++ + VGLTVLK++CRE  I RWPHRK+KSL+ LI ++Q              M + 
Sbjct: 258 VEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVA 317

Query: 233 NEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
            + + LE  KR + + P M++   T++ RQ  FK  ++  R
Sbjct: 318 KKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

BLAST of CmaCh18G013270 vs. NCBI nr
Match: gi|700202527|gb|KGN57660.1| (hypothetical protein Csa_3G239240 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-54
Identity = 141/280 (50.36%), Postives = 173/280 (61.79%), Query Frame = 1

Query: 3   PSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLS--LPFHWDD--ISEL 62
           P T  +   FDF W  H+ LFPF +E  ELPPLD D   D NS    L FH  D  + E 
Sbjct: 5   PQTFHNIPQFDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 64

Query: 63  ESEILSLDKHMIPVTPL--------------------YEEDMVAVDETKPERMVKLKDDD 122
           ESE LS +   I    L                     EE+    +E + E   + ++++
Sbjct: 65  ESEFLSREMDEIERKGLPSSTWKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 124

Query: 123 MSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNG----RRKSSVLGLEEIQKHFHIP 182
              E +E     E      +EEEEE EKR+RL+  N     R++S VLGLEEI+K++HIP
Sbjct: 125 EEEEEEEEEEEEEEEEEEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIKKYYHIP 184

Query: 183 ITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRL 242
           I+EAAK M+VGLTVLKRRCR+LNIMRWPHRKLKS NSLI NV+EMGLTNE+KGLEE KRL
Sbjct: 185 ISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRL 244

Query: 243 VEELPNMDLTHRTRRLRQACFKANYKKKRR---SNVAVLH 252
           + E PNMDLTH T+RLRQACFK  Y+K RR   +N+A LH
Sbjct: 245 LVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLH 283

BLAST of CmaCh18G013270 vs. NCBI nr
Match: gi|659133656|ref|XP_008466842.1| (PREDICTED: protein RKD4 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 136/252 (53.97%), Postives = 162/252 (64.29%), Query Frame = 1

Query: 12  FDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELESEILSLDKHMIP 71
           FDF W  H+ LFP  +E  ELPPLD D   D NS S                        
Sbjct: 15  FDFEW-LHEDLFPLHNELDELPPLDNDELLDVNSRS------------------------ 74

Query: 72  VTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEE-----CEK 131
           + P + +D           +++   + +SREL+ V        S WKEEEEE      EK
Sbjct: 75  LLPFHLDD---------NDVLEFDSEFLSRELEMVEIERNGFSSTWKEEEEEEEEEEGEK 134

Query: 132 RVRLIMRNG---RRKSS-VLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWP 191
           R+RL+  N    RRK S VLGLEEI+K+FHIPI++AAK M+VGLTVLKRRCR+LNIMRWP
Sbjct: 135 RLRLMGNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWP 194

Query: 192 HRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKK 251
           HRK KSLNSLI NV+EMGLTNE+KGLEEHKRL+EE+PNMDLTH  +RLRQACFKANYKK 
Sbjct: 195 HRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKN 232

BLAST of CmaCh18G013270 vs. NCBI nr
Match: gi|694321765|ref|XP_009352035.1| (PREDICTED: protein RKD4-like [Pyrus x bretschneideri])

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 112/257 (43.58%), Postives = 155/257 (60.31%), Query Frame = 1

Query: 3   PSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLSLPFHWD--------- 62
           P  +  PH+F+   PY+Q   P   ++  L  L ++    F S  LP  ++         
Sbjct: 12  PKIETDPHEFNSSIPYYQD--PCQDQSAALESLRLENFSQFTSPPLPLQYNPNQLPQMGS 71

Query: 63  -DISELESEILSLDKHMIPVTPLYEEDMVAVDETKPERMVK--LKDDDMSRELQEVTRMI 122
            D  +L      LD   +P    YE     VDE     M +  +  + +S +  +V RM+
Sbjct: 72  QDFEDLGIWDYILDDAALPSPFDYE----VVDENPLTTMAESIVCSNSVSGDSGDVFRML 131

Query: 123 ETGLSNWKEEEEECEKRVRLIMRNG----RRKSSVLGLEEIQKHFHIPITEAAKAMSVGL 182
           + G+ +W + + E       + +NG    R  ++ L L+EIQK+F +PIT+AAK + VGL
Sbjct: 132 DWGMESWGKYDGEG------MTKNGSCSKRMSAAPLELDEIQKYFDVPITQAAKELKVGL 191

Query: 183 TVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHR 242
           TVLKRRCRELNIMRWPHRKL+SLN+LI NV+ MGLTNE++ LEEHKRL+E+LP+M+L  R
Sbjct: 192 TVLKRRCRELNIMRWPHRKLRSLNALIENVKGMGLTNELRMLEEHKRLLEQLPDMELPER 251

Query: 243 TRRLRQACFKANYKKKR 244
            +RLRQACFKANYKKKR
Sbjct: 252 AKRLRQACFKANYKKKR 256

BLAST of CmaCh18G013270 vs. NCBI nr
Match: gi|566205376|ref|XP_002321399.2| (RWP-RK domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 167.9 bits (424), Expect = 2.2e-38
Identity = 87/132 (65.91%), Postives = 112/132 (84.85%), Query Frame = 1

Query: 115 SNWKEEEEECEKRVRLIMRNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCR 174
           S+ KEEEEE E+  ++   +GR++S  LGLEEIQKHF++PIT+AA+ M VGLTVLK+RCR
Sbjct: 124 SSVKEEEEEEEESRKM---SGRKRSVALGLEEIQKHFNMPITQAAREMKVGLTVLKKRCR 183

Query: 175 ELNIMRWPHRKLKSLNSLITNVQEMGLTN-EIKGLEEHKRLVEELPNMDLTHRTRRLRQA 234
           EL IMRWPHRK+KSLNSLI NV+EMGL+  +   LEEHKRL+E+LP+++LT RT++LRQA
Sbjct: 184 ELKIMRWPHRKIKSLNSLINNVKEMGLSEYDTIMLEEHKRLIEKLPDLELTERTKKLRQA 243

Query: 235 CFKANYKKKRRS 246
           CFKANYK++R S
Sbjct: 244 CFKANYKRRRLS 252

BLAST of CmaCh18G013270 vs. NCBI nr
Match: gi|747075416|ref|XP_011084743.1| (PREDICTED: protein RKD4 [Sesamum indicum])

HSP 1 Score: 167.2 bits (422), Expect = 3.8e-38
Identity = 81/111 (72.97%), Postives = 99/111 (89.19%), Query Frame = 1

Query: 133 RNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSL 192
           R+GR KSS L LEEIQK+F +PIT AA+ ++VGLTVLK+RCRELNI RWPHRK+KSL SL
Sbjct: 79  RSGRHKSSGLKLEEIQKYFDVPITVAARELNVGLTVLKKRCRELNITRWPHRKIKSLKSL 138

Query: 193 ITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKR 244
           I NV+E+GLTNEI+ LEEHKR+VE++P M+LT RT++LRQACFKANYKK+R
Sbjct: 139 IHNVKELGLTNEIEMLEEHKRMVEKIPEMELTERTKKLRQACFKANYKKRR 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RKD4_ARATH1.2e-2836.04Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1[more]
RKD2_ARATH6.7e-2736.36Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1[more]
RKD1_ARATH4.3e-2649.17Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1[more]
RKD3_ARATH1.2e-2337.28Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1[more]
RKD5_ARATH3.1e-1629.86Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L6Q6_CUCSA9.0e-5550.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239240 PE=4 SV=1[more]
E5GBA6_CUCME7.6e-5453.97Transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B9IDP6_POPTR1.5e-3865.91RWP-RK domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s014... [more]
A0A067JSK1_JATCU3.4e-3850.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23923 PE=4 SV=1[more]
A0A022PTG4_ERYGU3.4e-3874.34Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a025452mg... [more]
Match NameE-valueIdentityDescription
AT5G53040.16.9e-3036.04 RWP-RK domain-containing protein[more]
AT1G74480.13.8e-2836.36 RWP-RK domain-containing protein[more]
AT1G18790.12.4e-2749.17 RWP-RK domain-containing protein[more]
AT5G66990.16.6e-2537.28 RWP-RK domain-containing protein[more]
AT4G35590.11.8e-1729.86 RWP-RK domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|700202527|gb|KGN57660.1|1.3e-5450.36hypothetical protein Csa_3G239240 [Cucumis sativus][more]
gi|659133656|ref|XP_008466842.1|1.1e-5353.97PREDICTED: protein RKD4 [Cucumis melo][more]
gi|694321765|ref|XP_009352035.1|2.1e-4143.58PREDICTED: protein RKD4-like [Pyrus x bretschneideri][more]
gi|566205376|ref|XP_002321399.2|2.2e-3865.91RWP-RK domain-containing family protein [Populus trichocarpa][more]
gi|747075416|ref|XP_011084743.1|3.8e-3872.97PREDICTED: protein RKD4 [Sesamum indicum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009790 embryo development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G013270.1CmaCh18G013270.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 142..189
score: 1.8
IPR003035RWP-RK domainPROFILEPS51519RWP_RKcoord: 127..211
score: 17
NoneNo IPR availableunknownCoilCoilcoord: 114..134
scor
NoneNo IPR availablePANTHERPTHR10270SOX TRANSCRIPTION FACTORcoord: 94..245
score: 2.2
NoneNo IPR availablePANTHERPTHR10270:SF230SUBFAMILY NOT NAMEDcoord: 94..245
score: 2.2

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G013270Watermelon (97103) v2cmawmbB400
CmaCh18G013270Watermelon (97103) v2cmawmbB424
CmaCh18G013270Wax gourdcmawgoB0500
CmaCh18G013270Wax gourdcmawgoB0505
CmaCh18G013270Cucurbita maxima (Rimu)cmacmaB306
CmaCh18G013270Cucurbita maxima (Rimu)cmacmaB337
CmaCh18G013270Cucurbita maxima (Rimu)cmacmaB338
CmaCh18G013270Cucurbita maxima (Rimu)cmacmaB396
CmaCh18G013270Cucumber (Gy14) v1cgycmaB0009
CmaCh18G013270Cucumber (Gy14) v1cgycmaB0601
CmaCh18G013270Cucurbita moschata (Rifu)cmacmoB403
CmaCh18G013270Cucurbita moschata (Rifu)cmacmoB404
CmaCh18G013270Cucurbita moschata (Rifu)cmacmoB405
CmaCh18G013270Cucurbita moschata (Rifu)cmacmoB416
CmaCh18G013270Wild cucumber (PI 183967)cmacpiB417
CmaCh18G013270Wild cucumber (PI 183967)cmacpiB425
CmaCh18G013270Cucumber (Chinese Long) v2cmacuB412
CmaCh18G013270Cucumber (Chinese Long) v2cmacuB419
CmaCh18G013270Melon (DHL92) v3.5.1cmameB349
CmaCh18G013270Melon (DHL92) v3.5.1cmameB375
CmaCh18G013270Watermelon (Charleston Gray)cmawcgB347
CmaCh18G013270Watermelon (Charleston Gray)cmawcgB365
CmaCh18G013270Watermelon (97103) v1cmawmB377
CmaCh18G013270Watermelon (97103) v1cmawmB388
CmaCh18G013270Cucurbita pepo (Zucchini)cmacpeB423
CmaCh18G013270Cucurbita pepo (Zucchini)cmacpeB424
CmaCh18G013270Cucurbita pepo (Zucchini)cmacpeB425
CmaCh18G013270Cucurbita pepo (Zucchini)cmacpeB453
CmaCh18G013270Bottle gourd (USVL1VR-Ls)cmalsiB363
CmaCh18G013270Bottle gourd (USVL1VR-Ls)cmalsiB385
CmaCh18G013270Bottle gourd (USVL1VR-Ls)cmalsiB388
CmaCh18G013270Cucumber (Gy14) v2cgybcmaB354
CmaCh18G013270Cucumber (Gy14) v2cgybcmaB628
CmaCh18G013270Melon (DHL92) v3.6.1cmamedB403
CmaCh18G013270Melon (DHL92) v3.6.1cmamedB433
CmaCh18G013270Silver-seed gourdcarcmaB0714
CmaCh18G013270Silver-seed gourdcarcmaB1367
CmaCh18G013270Silver-seed gourdcarcmaB1368
CmaCh18G013270Cucumber (Chinese Long) v3cmacucB0491
CmaCh18G013270Cucumber (Chinese Long) v3cmacucB0500