MELO3C007447.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007447.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Protein tapetum determinant 1
Location	chr08 : 2841212 .. 2842756 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCAAAGGAAAACAACGTATACACACTGATCGAATTTTAAAAAAGATGGAGTTCGGGATGAAAAATTAGACCTTTTCTTGTAAGAACGCTTTTGGCGAGTCCACGTGGATGCTGATCTGGAGGATAAAACTCTACAACGTTCTTCTCCCTTCTACTGATTTAGTGTCTGAAGTTCAAATTTCGAATGATTTTATCATTTTTTTTAACGATTTAGTAGGTAACATTTGAATTCATATAATTATAAGATACACTTAAATTTTCAAAACTGGCTTTTGGTGTCTGGGTAGGTATAGGAGTTTCCTTTCTTCCGACCAAATAAACACCAATTGCCAAGTTCAATTACTCTTCTCCCACCAACGACTATGAGAAGAAGATTCAATCTGAACCCACAGACAAGTAAATAAATAACGCCGCACATCAAAAGCCGACATCCCCTGTTTTTGGCGGCGGCTCTGTAAATTGCACCAAAAAGGATAAACCTTTCCCCTTCCCCACCCTCCCTCTTTCTGATCTTGATCCACCCAGTTTGAGCAATCCATATCCCCTCTTACACCTTACGCCCTCCCCTTTAATGGCGGCCATCCCCACTTCACTTTGCTTTTACATCTCTACTCCTCTCCATGTTTTCTTACTCCTCCTCTTCTTCATCGAATTCTGCACCGACTTCATACAATATCCCCAAACTTAGTCAACCAGCTACCAGACTAACTATTCTTTGACTCATATAAACCATTTTGTTTACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTCGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTAAGCTAATTCAGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGGTAATACTCTTCTTTTCTTTTGATCTATTCATCTCTAATCTGTTAATCTACTGCATCTTCTTCCCCATCTGACTTACTTTTATACCCATCTTTTTCTTTTTCTTTTTTCGTTTTGGGTGGATTCAGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGTAAGAAATTCATTCTTACCTATGAAAATTAGATTGTTGTTCTTTACGTATATACCATGAATCTCTGATCTAAATAGGTAAAGAGATGAATCGTATTGGTTCGGAATGTTCAAAAAAAGATATCATTATATTTCAAGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

mRNA sequence

AACCAAAGGAAAACAACGTATACACACTGATCGAATTTTAAAAAAGATGGAGTTCGGGATGAAAAATTAGACCTTTTCTTGTAAGAACGCTTTTGGCGAGTCCACGTGGATGCTGATCTGGAGGATAAAACTCTACAACGTTCTTCTCCCTTCTACTGATTTAGTGTCTGAAGTTCAAATTTCGAATGATTTTATCATTTTTTTTAACGATTTAGTAGGTAACATTTGAATTCATATAATTATAAGATACACTTAAATTTTCAAAACTGGCTTTTGGTGTCTGGGTAGGTATAGGAGTTTCCTTTCTTCCGACCAAATAAACACCAATTGCCAAGTTCAATTACTCTTCTCCCACCAACGACTATGAGAAGAAGATTCAATCTGAACCCACAGACAAGTAAATAAATAACGCCGCACATCAAAAGCCGACATCCCCTGTTTTTGGCGGCGGCTCTGTAAATTGCACCAAAAAGGATAAACCTTTCCCCTTCCCCACCCTCCCTCTTTCTGATCTTGATCCACCCAGTTTGAGCAATCCATATCCCCTCTTACACCTTACGCCCTCCCCTTTAATGGCGGCCATCCCCACTTCACTTTGCTTTTACATCTCTACTCCTCTCCATGTTTTCTTACTCCTCCTCTTCTTCATCGAATTCTGCACCGACTTCATACAATATCCCCAAACTTAGTCAACCAGCTACCAGACTAACTATTCTTTGACTCATATAAACCATTTTGTTTACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTCGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTAAGCTAATTCAGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

Coding sequence (CDS)

ATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

Protein sequence

MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF

Homology

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BLAST of MELO3C007447.2 vs. NCBI nr
Match: XP_008440085.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 1.4e-73
Identity = 144/164 (87.80%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 164

[Close]

BLAST of MELO3C007447.2 vs. NCBI nr
Match: XP_004134986.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus] >KGN49042.1 hypothetical protein Csa_6G511090 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71
Identity = 141/163 (86.50%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCL FLL IFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of MELO3C007447.2 vs. NCBI nr
Match: XP_008440086.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 142/164 (86.59%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of MELO3C007447.2 vs. NCBI nr
Match: XP_011658115.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 2.3e-68
Identity = 139/163 (85.28%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCL FLL IFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLWFLLTIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of MELO3C007447.2 vs. NCBI nr
Match: XP_022949891.1 (TPD1 protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 7.7e-48
Identity = 105/159 (66.04%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 5   GAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS----------- 64
           GAF  F LCF  ++FL   FKLV L V+QAAARE  +GIS MSLQSS +           
Sbjct: 4   GAFRSFFLCF--SLFLA--FKLVRLSVVQAAAREKNSGISWMSLQSSKTGRGMNRVGSEC 63

Query: 65  ---------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRV 124
                    G   PLP GIP++IVQILNSC+S CSISNIH+KCGWFSSARLVNPRIF+RV
Sbjct: 64  SKDEVVVFQGQTAPLPDGIPSFIVQILNSCSSGCSISNIHMKCGWFSSARLVNPRIFRRV 123

Query: 125 SYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
            YDDCL+NDG+ALGPG+TLSFQYANTFPYPLSVSS TCS
Sbjct: 124 KYDDCLINDGKALGPGQTLSFQYANTFPYPLSVSSVTCS 158

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BLAST of MELO3C007447.2 vs. TAIR10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 147.5 bits (371), Expect = 6.3e-36
Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           G   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVND
Sbjct: 90  GSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVND 149

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G+ LGPG++LSFQYAN+F YPLSV+S +C
Sbjct: 150 GQPLGPGQSLSFQYANSFSYPLSVASVSC 178

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BLAST of MELO3C007447.2 vs. TAIR10
Match: AT4G24972.1 (tapetum determinant 1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-31
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 52  NSGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLV 111
           N     P+P GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+FKR+ YDDCLV
Sbjct: 85  NQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLV 144

Query: 112 NDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           N+G+ L  G TLSF YANTFPY LSV+  TC+
Sbjct: 145 NNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA 176

[Close]

BLAST of MELO3C007447.2 vs. TAIR10
Match: AT1G05835.1 (PHD finger protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 68  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSF 127
           V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 128 QYANTFPYPL 136
            Y+NT  + L
Sbjct: 110 NYSNTHQFAL 117

[Close]

BLAST of MELO3C007447.2 vs. Swiss-Prot
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-34
Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           G   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVND
Sbjct: 90  GSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVND 149

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G+ LGPG++LSFQYAN+F YPLSV+S +C
Sbjct: 150 GQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C007447.2 vs. Swiss-Prot
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.8e-30
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 52  NSGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLV 111
           N     P+P GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+FKR+ YDDCLV
Sbjct: 85  NQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLV 144

Query: 112 NDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           N+G+ L  G TLSF YANTFPY LSV+  TC+
Sbjct: 145 NNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA 176

[Close]

BLAST of MELO3C007447.2 vs. Swiss-Prot
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 55/95 (57.89%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCA------SDCSISNIHVKCGWFSSARLVNPRIFKRVSYD 113
           G ATPLP G+P Y V ++N CA       +C+I+ IHV+CGWFSS  LV+PR+F+R+ +D
Sbjct: 125 GRATPLPSGVPAYTVDVMNRCAGXXXXDEECAIAGIHVRCGWFSSVSLVDPRVFRRLGHD 184

Query: 114 DCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATC 143
           DCL+NDGR L  G T+SF+Y N+FPY LSVS ATC
Sbjct: 185 DCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of MELO3C007447.2 vs. Swiss-Prot
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-21
Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 56  ATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGR 115
           A  LP GIPTY V+I+N C + C++ ++H+ CG F+SA LV+P  F+R+ ++DCLV  G 
Sbjct: 83  AEHLPSGIPTYSVEIINVCTA-CTVYDVHISCGEFASAELVDPSQFQRIGFNDCLVKGGG 142

Query: 116 ALGPGRTLSFQYANTFPYPLSVSSATC 143
            LGP   +SFQY+N+F YPL+V++  C
Sbjct: 143 RLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of MELO3C007447.2 vs. Swiss-Prot
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 68  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSF 127
           V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 128 QYANTFPYPL 136
            Y+NT  + L
Sbjct: 110 NYSNTHQFAL 117

[Close]

BLAST of MELO3C007447.2 vs. TrEMBL
Match: tr|A0A1S3AZV4|A0A1S3AZV4_CUCME (TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 9.2e-74
Identity = 144/164 (87.80%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 164

[Close]

BLAST of MELO3C007447.2 vs. TrEMBL
Match: tr|A0A0A0KL27|A0A0A0KL27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 141/163 (86.50%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCL FLL IFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of MELO3C007447.2 vs. TrEMBL
Match: tr|A0A1S3B0B6|A0A1S3B0B6_CUCME (TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.3e-71
Identity = 142/164 (86.59%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of MELO3C007447.2 vs. TrEMBL
Match: tr|A0A218XEX6|A0A218XEX6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012781 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.8e-35
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           GP  PLP G+PTY VQILN CASDCSIS+IHV CGWFSSARLVNP +F+R+ YDDCLVND
Sbjct: 18  GPTEPLPDGVPTYTVQILNVCASDCSISDIHVSCGWFSSARLVNPSVFRRIYYDDCLVND 77

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G ALGPG  +SFQYAN+FPYPLSVS+ +C
Sbjct: 78  GNALGPGDGISFQYANSFPYPLSVSAVSC 106

[Close]

BLAST of MELO3C007447.2 vs. TrEMBL
Match: tr|A0A2I0GK22|A0A2I0GK22_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_050232 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.2e-34
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           GP  PLP G+PTY VQILN CASDCSIS+IHV CGWFSSA LVNP +F+R+ YDDCLVND
Sbjct: 18  GPTEPLPDGVPTYTVQILNVCASDCSISDIHVSCGWFSSAWLVNPSVFRRIYYDDCLVND 77

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G ALGPG  +SFQYAN+FPYPLSVS+ +C
Sbjct: 78  GNALGPGDGISFQYANSFPYPLSVSAVSC 106

The following BLAST results are available for this feature:

BLAST of MELO3C007447.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440085.1	1.4e-73	87.80	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo]	[more]
XP_004134986.1	2.9e-71	86.50	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus] >KGN49042.1 ...	[more]
XP_008440086.1	1.1e-70	86.59	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]	[more]
XP_011658115.1	2.3e-68	85.28	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus]	[more]
XP_022949891.1	7.7e-48	66.04	TPD1 protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of MELO3C007447.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32583.1	6.3e-36	68.54	FUNCTIONS IN: molecular_function unknown	[more]
AT4G24972.1	2.1e-31	61.96	tapetum determinant 1	[more]
AT1G05835.1	1.2e-07	40.00	PHD finger protein	[more]

BLAST of MELO3C007447.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1G3T1\|TDL1_ARATH	1.1e-34	68.54	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
sp\|Q6TLJ2\|TPD1_ARATH	3.8e-30	61.96	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
sp\|Q2QR54\|TDL1A_ORYSJ	1.6e-28	57.89	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
sp\|Q8S6P9\|TDL1B_ORYSJ	4.2e-21	49.43	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
sp\|A8MS78\|Y1583_ARATH	2.2e-06	40.00	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of MELO3C007447.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZV4\|A0A1S3AZV4_CUCME	9.2e-74	87.80	TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
tr\|A0A0A0KL27\|A0A0A0KL27_CUCSA	1.9e-71	86.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1	[more]
tr\|A0A1S3B0B6\|A0A1S3B0B6_CUCME	7.3e-71	86.59	TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
tr\|A0A218XEX6\|A0A218XEX6_PUNGR	3.8e-35	76.40	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012781 PE=4 SV=1	[more]
tr\|A0A2I0GK22\|A0A2I0GK22_PUNGR	3.2e-34	75.28	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_050232 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009408	response to heat
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007447.2.1	MELO3C007447.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF26	TPD1 PROTEIN HOMOLOG 1	coord: 52..143
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 52..143

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007447.2	Csa6G511090	Cucumber (Chinese Long) v2	cumedB486
MELO3C007447.2	CSPI06G32890	Wild cucumber (PI 183967)	cpimedB496
MELO3C007447.2	Cucsa.044660	Cucumber (Gy14) v1	cgymedB025
MELO3C007447.2	CmaCh03G005840	Cucurbita maxima (Rimu)	cmamedB694
MELO3C007447.2	CmoCh03G006100	Cucurbita moschata (Rifu)	cmomedB686
MELO3C007447.2	Lsi01G004920	Bottle gourd (USVL1VR-Ls)	lsimedB156
MELO3C007447.2	Cla014393	Watermelon (97103) v1	medwmB561
MELO3C007447.2	ClCG01G021330	Watermelon (Charleston Gray)	medwcgB510
MELO3C007447.2	Cla97C01G020910	Watermelon (97103) v2	medwmbB507
MELO3C007447.2	Carg00505	Silver-seed gourd	carmedB0417
MELO3C007447.2	CsaV3_6G048340	Cucumber (Chinese Long) v3	cucmedB508

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007447.2	Cucumber (Gy14) v2	cgybmedB442
MELO3C007447.2	Cucurbita maxima (Rimu)	cmamedB897
MELO3C007447.2	Cucurbita moschata (Rifu)	cmomedB886
MELO3C007447.2	Cucurbita pepo (Zucchini)	cpemedB091
MELO3C007447.2	Cucurbita pepo (Zucchini)	cpemedB540
MELO3C007447.2	Silver-seed gourd	carmedB0652
MELO3C007447.2	Wax gourd	medwgoB641