MELO3C007447.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007447.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Protein tapetum determinant 1
Location	chr08 : 2841212 .. 2842756 (-)
Sequence length	1282

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCAAAGGAAAACAACGTATACACACTGATCGAATTTTAAAAAAGATGGAGTTCGGGATGAAAAATTAGACCTTTTCTTGTAAGAACGCTTTTGGCGAGTCCACGTGGATGCTGATCTGGAGGATAAAACTCTACAACGTTCTTCTCCCTTCTACTGATTTAGTGTCTGAAGTTCAAATTTCGAATGATTTTATCATTTTTTTTAACGATTTAGTAGGTAACATTTGAATTCATATAATTATAAGATACACTTAAATTTTCAAAACTGGCTTTTGGTGTCTGGGTAGGTATAGGAGTTTCCTTTCTTCCGACCAAATAAACACCAATTGCCAAGTTCAATTACTCTTCTCCCACCAACGACTATGAGAAGAAGATTCAATCTGAACCCACAGACAAGTAAATAAATAACGCCGCACATCAAAAGCCGACATCCCCTGTTTTTGGCGGCGGCTCTGTAAATTGCACCAAAAAGGATAAACCTTTCCCCTTCCCCACCCTCCCTCTTTCTGATCTTGATCCACCCAGTTTGAGCAATCCATATCCCCTCTTACACCTTACGCCCTCCCCTTTAATGGCGGCCATCCCCACTTCACTTTGCTTTTACATCTCTACTCCTCTCCATGTTTTCTTACTCCTCCTCTTCTTCATCGAATTCTGCACCGACTTCATACAATATCCCCAAACTTAGTCAACCAGCTACCAGACTAACTATTCTTTGACTCATATAAACCATTTTGTTTACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTCGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTAAGCTAATTCAGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGGTAATACTCTTCTTTTCTTTTGATCTATTCATCTCTAATCTGTTAATCTACTGCATCTTCTTCCCCATCTGACTTACTTTTATACCCATCTTTTTCTTTTTCTTTTTTCGTTTTGGGTGGATTCAGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGTAAGAAATTCATTCTTACCTATGAAAATTAGATTGTTGTTCTTTACGTATATACCATGAATCTCTGATCTAAATAGGTAAAGAGATGAATCGTATTGGTTCGGAATGTTCAAAAAAAGATATCATTATATTTCAAGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

mRNA sequence

AACCAAAGGAAAACAACGTATACACACTGATCGAATTTTAAAAAAGATGGAGTTCGGGATGAAAAATTAGACCTTTTCTTGTAAGAACGCTTTTGGCGAGTCCACGTGGATGCTGATCTGGAGGATAAAACTCTACAACGTTCTTCTCCCTTCTACTGATTTAGTGTCTGAAGTTCAAATTTCGAATGATTTTATCATTTTTTTTAACGATTTAGTAGGTAACATTTGAATTCATATAATTATAAGATACACTTAAATTTTCAAAACTGGCTTTTGGTGTCTGGGTAGGTATAGGAGTTTCCTTTCTTCCGACCAAATAAACACCAATTGCCAAGTTCAATTACTCTTCTCCCACCAACGACTATGAGAAGAAGATTCAATCTGAACCCACAGACAAGTAAATAAATAACGCCGCACATCAAAAGCCGACATCCCCTGTTTTTGGCGGCGGCTCTGTAAATTGCACCAAAAAGGATAAACCTTTCCCCTTCCCCACCCTCCCTCTTTCTGATCTTGATCCACCCAGTTTGAGCAATCCATATCCCCTCTTACACCTTACGCCCTCCCCTTTAATGGCGGCCATCCCCACTTCACTTTGCTTTTACATCTCTACTCCTCTCCATGTTTTCTTACTCCTCCTCTTCTTCATCGAATTCTGCACCGACTTCATACAATATCCCCAAACTTAGTCAACCAGCTACCAGACTAACTATTCTTTGACTCATATAAACCATTTTGTTTACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTCGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTAAGCTAATTCAGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

Coding sequence (CDS)

ATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

Protein sequence

MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF

Homology

[Close]

BLAST of MELO3C007447.2.1 vs. NCBI nr
Match: XP_008440085.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 1.4e-73
Identity = 144/164 (87.80%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 164

[Close]

BLAST of MELO3C007447.2.1 vs. NCBI nr
Match: XP_004134986.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus] >KGN49042.1 hypothetical protein Csa_6G511090 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71
Identity = 141/163 (86.50%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCL FLL IFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of MELO3C007447.2.1 vs. NCBI nr
Match: XP_008440086.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 142/164 (86.59%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of MELO3C007447.2.1 vs. NCBI nr
Match: XP_011658115.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 2.3e-68
Identity = 139/163 (85.28%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCL FLL IFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLWFLLTIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of MELO3C007447.2.1 vs. NCBI nr
Match: XP_022949891.1 (TPD1 protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 7.7e-48
Identity = 105/159 (66.04%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 5   GAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS----------- 64
           GAF  F LCF  ++FL   FKLV L V+QAAARE  +GIS MSLQSS +           
Sbjct: 4   GAFRSFFLCF--SLFLA--FKLVRLSVVQAAAREKNSGISWMSLQSSKTGRGMNRVGSEC 63

Query: 65  ---------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRV 124
                    G   PLP GIP++IVQILNSC+S CSISNIH+KCGWFSSARLVNPRIF+RV
Sbjct: 64  SKDEVVVFQGQTAPLPDGIPSFIVQILNSCSSGCSISNIHMKCGWFSSARLVNPRIFRRV 123

Query: 125 SYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
            YDDCL+NDG+ALGPG+TLSFQYANTFPYPLSVSS TCS
Sbjct: 124 KYDDCLINDGKALGPGQTLSFQYANTFPYPLSVSSVTCS 158

[Close]

BLAST of MELO3C007447.2.1 vs. TAIR10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 147.5 bits (371), Expect = 6.3e-36
Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           G   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVND
Sbjct: 90  GSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVND 149

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G+ LGPG++LSFQYAN+F YPLSV+S +C
Sbjct: 150 GQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C007447.2.1 vs. TAIR10
Match: AT4G24972.1 (tapetum determinant 1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-31
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 52  NSGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLV 111
           N     P+P GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+FKR+ YDDCLV
Sbjct: 85  NQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLV 144

Query: 112 NDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           N+G+ L  G TLSF YANTFPY LSV+  TC+
Sbjct: 145 NNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA 176

[Close]

BLAST of MELO3C007447.2.1 vs. TAIR10
Match: AT1G05835.1 (PHD finger protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 68  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSF 127
           V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 128 QYANTFPYPL 136
            Y+NT  + L
Sbjct: 110 NYSNTHQFAL 117

[Close]

BLAST of MELO3C007447.2.1 vs. Swiss-Prot
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-34
Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           G   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVND
Sbjct: 90  GSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVND 149

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G+ LGPG++LSFQYAN+F YPLSV+S +C
Sbjct: 150 GQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C007447.2.1 vs. Swiss-Prot
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.8e-30
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 52  NSGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLV 111
           N     P+P GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+FKR+ YDDCLV
Sbjct: 85  NQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLV 144

Query: 112 NDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           N+G+ L  G TLSF YANTFPY LSV+  TC+
Sbjct: 145 NNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA 176

[Close]

BLAST of MELO3C007447.2.1 vs. Swiss-Prot
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 55/95 (57.89%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCA------SDCSISNIHVKCGWFSSARLVNPRIFKRVSYD 113
           G ATPLP G+P Y V ++N CA       +C+I+ IHV+CGWFSS  LV+PR+F+R+ +D
Sbjct: 125 GRATPLPSGVPAYTVDVMNRCAGXXXXDEECAIAGIHVRCGWFSSVSLVDPRVFRRLGHD 184

Query: 114 DCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATC 143
           DCL+NDGR L  G T+SF+Y N+FPY LSVS ATC
Sbjct: 185 DCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of MELO3C007447.2.1 vs. Swiss-Prot
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-21
Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 56  ATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGR 115
           A  LP GIPTY V+I+N C + C++ ++H+ CG F+SA LV+P  F+R+ ++DCLV  G 
Sbjct: 83  AEHLPSGIPTYSVEIINVCTA-CTVYDVHISCGEFASAELVDPSQFQRIGFNDCLVKGGG 142

Query: 116 ALGPGRTLSFQYANTFPYPLSVSSATC 143
            LGP   +SFQY+N+F YPL+V++  C
Sbjct: 143 RLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of MELO3C007447.2.1 vs. Swiss-Prot
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 68  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSF 127
           V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 128 QYANTFPYPL 136
            Y+NT  + L
Sbjct: 110 NYSNTHQFAL 117

[Close]

BLAST of MELO3C007447.2.1 vs. TrEMBL
Match: tr|A0A1S3AZV4|A0A1S3AZV4_CUCME (TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 9.2e-74
Identity = 144/164 (87.80%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 164

[Close]

BLAST of MELO3C007447.2.1 vs. TrEMBL
Match: tr|A0A0A0KL27|A0A0A0KL27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 141/163 (86.50%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCL FLL IFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 144
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of MELO3C007447.2.1 vs. TrEMBL
Match: tr|A0A1S3B0B6|A0A1S3B0B6_CUCME (TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.3e-71
Identity = 142/164 (86.59%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNS------- 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNS       
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  -------------GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
                        GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 145
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of MELO3C007447.2.1 vs. TrEMBL
Match: tr|A0A218XEX6|A0A218XEX6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012781 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.8e-35
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           GP  PLP G+PTY VQILN CASDCSIS+IHV CGWFSSARLVNP +F+R+ YDDCLVND
Sbjct: 18  GPTEPLPDGVPTYTVQILNVCASDCSISDIHVSCGWFSSARLVNPSVFRRIYYDDCLVND 77

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G ALGPG  +SFQYAN+FPYPLSVS+ +C
Sbjct: 78  GNALGPGDGISFQYANSFPYPLSVSAVSC 106

[Close]

BLAST of MELO3C007447.2.1 vs. TrEMBL
Match: tr|A0A2I0GK22|A0A2I0GK22_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_050232 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.2e-34
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 54  GPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVND 113
           GP  PLP G+PTY VQILN CASDCSIS+IHV CGWFSSA LVNP +F+R+ YDDCLVND
Sbjct: 18  GPTEPLPDGVPTYTVQILNVCASDCSISDIHVSCGWFSSAWLVNPSVFRRIYYDDCLVND 77

Query: 114 GRALGPGRTLSFQYANTFPYPLSVSSATC 143
           G ALGPG  +SFQYAN+FPYPLSVS+ +C
Sbjct: 78  GNALGPGDGISFQYANSFPYPLSVSAVSC 106

The following BLAST results are available for this feature:

BLAST of MELO3C007447.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440085.1	1.4e-73	87.80	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo]	[more]
XP_004134986.1	2.9e-71	86.50	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus] >KGN49042.1 ...	[more]
XP_008440086.1	1.1e-70	86.59	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]	[more]
XP_011658115.1	2.3e-68	85.28	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus]	[more]
XP_022949891.1	7.7e-48	66.04	TPD1 protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of MELO3C007447.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32583.1	6.3e-36	68.54	FUNCTIONS IN: molecular_function unknown	[more]
AT4G24972.1	2.1e-31	61.96	tapetum determinant 1	[more]
AT1G05835.1	1.2e-07	40.00	PHD finger protein	[more]

BLAST of MELO3C007447.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1G3T1\|TDL1_ARATH	1.1e-34	68.54	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
sp\|Q6TLJ2\|TPD1_ARATH	3.8e-30	61.96	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
sp\|Q2QR54\|TDL1A_ORYSJ	1.6e-28	57.89	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
sp\|Q8S6P9\|TDL1B_ORYSJ	4.2e-21	49.43	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
sp\|A8MS78\|Y1583_ARATH	2.2e-06	40.00	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of MELO3C007447.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZV4\|A0A1S3AZV4_CUCME	9.2e-74	87.80	TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
tr\|A0A0A0KL27\|A0A0A0KL27_CUCSA	1.9e-71	86.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1	[more]
tr\|A0A1S3B0B6\|A0A1S3B0B6_CUCME	7.3e-71	86.59	TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
tr\|A0A218XEX6\|A0A218XEX6_PUNGR	3.8e-35	76.40	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012781 PE=4 SV=1	[more]
tr\|A0A2I0GK22\|A0A2I0GK22_PUNGR	3.2e-34	75.28	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_050232 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007447.2	MELO3C007447.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C007447.2.1	MELO3C007447.2.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C007447.2.1.five_prime_UTR.1	MELO3C007447.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C007447.2.1.exon.3	MELO3C007447.2.1.exon.3	exon
MELO3C007447.2.1.exon.2	MELO3C007447.2.1.exon.2	exon
MELO3C007447.2.1.exon.1	MELO3C007447.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C007447.2.1.CDS.3	MELO3C007447.2.1.CDS.3	CDS
MELO3C007447.2.1.CDS.2	MELO3C007447.2.1.CDS.2	CDS
MELO3C007447.2.1.CDS.1	MELO3C007447.2.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF26	TPD1 PROTEIN HOMOLOG 1	coord: 52..143
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 52..143