Cla97C01G020910 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G020910
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	protein TAPETUM DETERMINANT 1-like
Location	Cla97Chr01 : 33352105 .. 33352752 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGGTAATGGTAACTCTTTTTTTCTTTGATCTATATAATCTATTCTACTGCATCTTCTTGCCCATTTCATTTAGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAGAAACTCAATTCTTACTATGAAAATGTTGTTCTTTACTTATACACGATGAATCTCATTCTAAACAGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

mRNA sequence

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

Coding sequence (CDS)

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

Protein sequence

MKGGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

Homology

[Close]

BLAST of Cla97C01G020910 vs. NCBI nr
Match: XP_008440085.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 4.0e-77
Identity = 143/160 (89.38%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCLCF L  FLGNEFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSE
Sbjct: 4   GGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSE 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           CSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 163
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of Cla97C01G020910 vs. NCBI nr
Match: XP_004134986.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus] >KGN49042.1 hypothetical protein Csa_6G511090 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 8.9e-77
Identity = 143/161 (88.82%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCL F LT FLGNEFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGS 
Sbjct: 4   GGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSR 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 164
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 164

[Close]

BLAST of Cla97C01G020910 vs. NCBI nr
Match: XP_008440086.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 4.1e-74
Identity = 141/160 (88.12%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCLCF L  FL  EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSE
Sbjct: 4   GGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSE 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           CSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 163
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of Cla97C01G020910 vs. NCBI nr
Match: XP_011658115.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 9.2e-74
Identity = 141/161 (87.58%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCL F LT FL  EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGS 
Sbjct: 4   GGAFHRFCLWFLLTIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSR 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 164
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 162

[Close]

BLAST of Cla97C01G020910 vs. NCBI nr
Match: XP_023544807.1 (TPD1 protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 126/163 (77.30%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MKGGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIG 60
           MKGGAF  F LCF L  FL   FKLV L VV+AAAREK +GIS MSLQSS +G+ MNR+G
Sbjct: 1   MKGGAFRSFFLCFSL--FLA--FKLVRLSVVQAAAREKNSGISWMSLQSSKTGRGMNRVG 60

Query: 61  SECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF 120
           SECSKD++++FQGQ  PLPDGIP++IVQILNSC+S CSISNIH+KCGWFSSARLVNPRIF
Sbjct: 61  SECSKDEVVVFQGQTAPLPDGIPSFIVQILNSCSSGCSISNIHMKCGWFSSARLVNPRIF 120

Query: 121 RRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 164
           RRV YDDCL+NDG+AL PGQTLSFQYANTFPYPLSVS V CSS
Sbjct: 121 RRVKYDDCLINDGKALAPGQTLSFQYANTFPYPLSVSSVTCSS 159

[Close]

BLAST of Cla97C01G020910 vs. TrEMBL
Match: tr|A0A1S3AZV4|A0A1S3AZV4_CUCME (TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.6e-77
Identity = 143/160 (89.38%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCLCF L  FLGNEFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSE
Sbjct: 4   GGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSE 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           CSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 163
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of Cla97C01G020910 vs. TrEMBL
Match: tr|A0A0A0KL27|A0A0A0KL27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 5.9e-77
Identity = 143/161 (88.82%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCL F LT FLGNEFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGS 
Sbjct: 4   GGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSR 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 164
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 164

[Close]

BLAST of Cla97C01G020910 vs. TrEMBL
Match: tr|A0A1S3B0B6|A0A1S3B0B6_CUCME (TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.7e-74
Identity = 141/160 (88.12%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLGNEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSE 62
           GGAFHRFCLCF L  FL  EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSE
Sbjct: 4   GGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSE 63

Query: 63  CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRR 122
           CSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIF+R
Sbjct: 64  CSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKR 123

Query: 123 VSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 163
           VSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 VSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of Cla97C01G020910 vs. TrEMBL
Match: tr|M4D124|M4D124_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.5e-45
Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 37  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 96
           E RNG+S   L S + G    RIG ECSKDD+++FQG   PLP+G+P + V+ILN+CASD
Sbjct: 51  ENRNGLSRKLLLSPDIGDGTKRIGEECSKDDVVVFQGSTVPLPNGVPAFTVEILNACASD 110

Query: 97  CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 156
           CS++ IHV CGWFSS RLVNPR+FRR+SYDDCLVNDGQ L PGQTLSFQYAN+F YPLSV
Sbjct: 111 CSVAEIHVSCGWFSSVRLVNPRVFRRLSYDDCLVNDGQPLAPGQTLSFQYANSFAYPLSV 170

Query: 157 SFVIC 162
           S V C
Sbjct: 171 SSVSC 175

[Close]

BLAST of Cla97C01G020910 vs. TrEMBL
Match: tr|A0A078GK28|A0A078GK28_BRANA (BnaA05g18070D protein OS=Brassica napus OX=3708 GN=BnaA05g18070D PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.5e-45
Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 37  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 96
           E RNG+S   L S + G    RIG ECSKDD+++FQG   PLP+G+P + V+ILN+CASD
Sbjct: 51  ENRNGLSRKLLLSPDIGDGTKRIGEECSKDDVVVFQGSTVPLPNGVPAFTVEILNACASD 110

Query: 97  CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 156
           CS++ IHV CGWFSS RLVNPR+FRR+SYDDCLVNDGQ L PGQTLSFQYAN+F YPLSV
Sbjct: 111 CSVAEIHVSCGWFSSVRLVNPRVFRRLSYDDCLVNDGQPLAPGQTLSFQYANSFAYPLSV 170

Query: 157 SFVIC 162
           S V C
Sbjct: 171 SSVSC 175

[Close]

BLAST of Cla97C01G020910 vs. Swiss-Prot
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 37  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 96
           E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 97  CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 156
           C+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ LGPGQ+LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 157 SFVIC 162
           + V C
Sbjct: 174 ASVSC 178

[Close]

BLAST of Cla97C01G020910 vs. Swiss-Prot
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-35
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 45  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSI 104
           M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 105 SNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFV 163
           S IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+FV
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of Cla97C01G020910 vs. Swiss-Prot
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.0e-31
Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 58  RIGSECS-KDDIIIFQGQKTPLPDGIPTYIVQILNSCA------SDCSISNIHVKCGWFS 117
           R+   C+  DDI I+QG+ TPLP G+P Y V ++N CA       +C+I+ IHV+CGWFS
Sbjct: 109 RVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGXXXXDEECAIAGIHVRCGWFS 168

Query: 118 SARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVIC 162
           S  LV+PR+FRR+ +DDCL+NDG+ L  G+T+SF+Y N+FPY LSVS   C
Sbjct: 169 SVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of Cla97C01G020910 vs. Swiss-Prot
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 51/115 (44.35%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 49  SSNSGKE-MNRIGSE-CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKC 108
           S N G+  M R+  + CS+ +++++Q     LP GIPTY V+I+N C + C++ ++H+ C
Sbjct: 55  SPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVCTA-CTVYDVHISC 114

Query: 109 GWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVIC 162
           G F+SA LV+P  F+R+ ++DCLV  G  LGP + +SFQY+N+F YPL+V+ V C
Sbjct: 115 GEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of Cla97C01G020910 vs. Swiss-Prot
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 87  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSF 146
           V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 147 QYANTFPY---PLSVSF 159
            Y+NT  +   PLS SF
Sbjct: 110 NYSNTHQFALRPLSWSF 124

[Close]

BLAST of Cla97C01G020910 vs. TAIR10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 183.7 bits (465), Expect = 8.9e-47
Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 37  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 96
           E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 97  CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 156
           C+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ LGPGQ+LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 157 SFVIC 162
           + V C
Sbjct: 174 ASVSC 178

[Close]

BLAST of Cla97C01G020910 vs. TAIR10
Match: AT4G24972.1 (tapetum determinant 1)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-36
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 45  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSI 104
           M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 105 SNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFV 163
           S IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+FV
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of Cla97C01G020910 vs. TAIR10
Match: AT1G05835.1 (PHD finger protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.4e-09
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 87  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSF 146
           V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 147 QYANTFPY---PLSVSF 159
            Y+NT  +   PLS SF
Sbjct: 110 NYSNTHQFALRPLSWSF 124

The following BLAST results are available for this feature:

BLAST of Cla97C01G020910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440085.1	4.0e-77	89.38	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo]	[more]
XP_004134986.1	8.9e-77	88.82	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus] >KGN49042.1 ...	[more]
XP_008440086.1	4.1e-74	88.13	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]	[more]
XP_011658115.1	9.2e-74	87.58	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus]	[more]
XP_023544807.1	7.8e-65	77.30	TPD1 protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G020910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZV4\|A0A1S3AZV4_CUCME	2.6e-77	89.38	TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
tr\|A0A0A0KL27\|A0A0A0KL27_CUCSA	5.9e-77	88.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1	[more]
tr\|A0A1S3B0B6\|A0A1S3B0B6_CUCME	2.7e-74	88.13	TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
tr\|M4D124\|M4D124_BRARP	3.5e-45	68.00	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1	[more]
tr\|A0A078GK28\|A0A078GK28_BRANA	3.5e-45	68.00	BnaA05g18070D protein OS=Brassica napus OX=3708 GN=BnaA05g18070D PE=4 SV=1	[more]

BLAST of Cla97C01G020910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1G3T1\|TDL1_ARATH	1.6e-45	65.60	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
sp\|Q6TLJ2\|TPD1_ARATH	2.0e-35	56.10	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
sp\|Q2QR54\|TDL1A_ORYSJ	5.0e-31	53.15	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
sp\|Q8S6P9\|TDL1B_ORYSJ	1.6e-24	44.35	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
sp\|A8MS78\|Y1583_ARATH	1.3e-07	44.16	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Cla97C01G020910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32583.1	8.9e-47	65.60	FUNCTIONS IN: molecular_function unknown	[more]
AT4G24972.1	1.1e-36	56.10	tapetum determinant 1	[more]
AT1G05835.1	7.4e-09	44.16	PHD finger protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009408	response to heat
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G020910.1	Cla97C01G020910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF26	TPD1 PROTEIN HOMOLOG 1	coord: 32..162
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 32..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G020910	Cla014393	Watermelon (97103) v1	wmwmbB234
Cla97C01G020910	Csa6G511090	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G020910	MELO3C007447	Melon (DHL92) v3.5.1	mewmbB515
Cla97C01G020910	ClCG01G021330	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G020910	CSPI06G32890	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G020910	Cucsa.044660	Cucumber (Gy14) v1	cgywmbB017
Cla97C01G020910	CmaCh03G005840	Cucurbita maxima (Rimu)	cmawmbB670
Cla97C01G020910	CmoCh03G006100	Cucurbita moschata (Rifu)	cmowmbB642
Cla97C01G020910	Lsi01G004920	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G020910	MELO3C007447.2	Melon (DHL92) v3.6.1	medwmbB507
Cla97C01G020910	Carg00505	Silver-seed gourd	carwmbB0426
Cla97C01G020910	CsaV3_6G048340	Cucumber (Chinese Long) v3	cucwmbB430

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G020910	Watermelon (97103) v2	wmbwmbB000
Cla97C01G020910	Silver-seed gourd	carwmbB0669
Cla97C01G020910	Cucumber (Gy14) v2	cgybwmbB006
Cla97C01G020910	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G020910	Cucurbita maxima (Rimu)	cmawmbB402
Cla97C01G020910	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G020910	Cucurbita moschata (Rifu)	cmowmbB849
Cla97C01G020910	Wild cucumber (PI 183967)	cpiwmbB005
Cla97C01G020910	Cucumber (Chinese Long) v2	cuwmbB005
Cla97C01G020910	Bottle gourd (USVL1VR-Ls)	lsiwmbB160
Cla97C01G020910	Melon (DHL92) v3.5.1	mewmbB139
Cla97C01G020910	Wax gourd	wgowmbB402