ClCG01G021330 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G021330
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	TPD1
Location	CG_Chr01 : 35191549 .. 35192196 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGGTAATGGTAACTCTTTTTTTCTTTGATCTATATAATCTATTCTACTGCATCTTCTTGCCCATTTCATTTAGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAGAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAGAAACTCAATTCTTACTATGAAAATGTTGTTCTTTACTTATCCACGATGAATCTCATTCTAAACAGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

mRNA sequence

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAGAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

Coding sequence (CDS)

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAGAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

Protein sequence

MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

Homology

[Close]

BLAST of ClCG01G021330 vs. Swiss-Prot
Match: TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.6e-45
Identity = 82/125 (65.60%), Postives = 95/125 (76.00%), Query Frame = 1


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           C+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ LGPGQ+LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 162 SFVIC 167
           + V C
Sbjct: 174 ASVSC 178

[Close]

BLAST of ClCG01G021330 vs. Swiss-Prot
Match: TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.8e-35
Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 50  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSI 109
           M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 110 SNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFV 168
           S IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+FV
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of ClCG01G021330 vs. Swiss-Prot
Match: TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.9e-31
Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 1


Query: 47  ISGMSLQSSNSGKEMNRIGSECS-KDDIIIFQGQKTPLPDGIPTYIVQILNSCAS----- 106
           +SG        G    R+   C+  DDI I+QG+ TPLP G+P Y V ++N CA      
Sbjct: 93  VSGSGGGGGGDGVRTRRVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGD 152

Query: 107 -DCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPL 166
            +C+I+ IHV+CGWFSS  LV+PR+FRR+ +DDCL+NDG+ L  G+T+SF+Y N+FPY L
Sbjct: 153 EECAIAGIHVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKL 212

[Close]

BLAST of ClCG01G021330 vs. Swiss-Prot
Match: TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.6e-24
Identity = 51/115 (44.35%), Postives = 79/115 (68.70%), Query Frame = 1


Query: 54  SSNSGKE-MNRIGSE-CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKC 113
           S N G+  M R+  + CS+ +++++Q     LP GIPTY V+I+N C + C++ ++H+ C
Sbjct: 55  SPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVCTA-CTVYDVHISC 114

Query: 114 GWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVIC 167
           G F+SA LV+P  F+R+ ++DCLV  G  LGP + +SFQY+N+F YPL+V+ V C
Sbjct: 115 GEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of ClCG01G021330 vs. Swiss-Prot
Match: Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.7e-07
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 1


Query: 92  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSF 151
           V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 152 QYANTFPY---PLSVSF 164
            Y+NT  +   PLS SF
Sbjct: 110 NYSNTHQFALRPLSWSF 124

[Close]

BLAST of ClCG01G021330 vs. TrEMBL
Match: A0A0A0KL27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511090 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.4e-74
Identity = 141/166 (84.94%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCL F LT FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLWFLLTIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 164

[Close]

BLAST of ClCG01G021330 vs. TrEMBL
Match: A0A078GK28_BRANA (BnaA05g18070D protein OS=Brassica napus GN=BnaA05g18070D PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.3e-45
Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = 1


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           E RNG+S   L S + G    RIG ECSKDD+++FQG   PLP+G+P + V+ILN+CASD
Sbjct: 51  ENRNGLSRKLLLSPDIGDGTKRIGEECSKDDVVVFQGSTVPLPNGVPAFTVEILNACASD 110

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           CS++ IHV CGWFSS RLVNPR+FRR+SYDDCLVNDGQ L PGQTLSFQYAN+F YPLSV
Sbjct: 111 CSVAEIHVSCGWFSSVRLVNPRVFRRLSYDDCLVNDGQPLAPGQTLSFQYANSFAYPLSV 170

Query: 162 SFVIC 167
           S V C
Sbjct: 171 SSVSC 175

[Close]

BLAST of ClCG01G021330 vs. TrEMBL
Match: M4D124_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.3e-45
Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = 1


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           E RNG+S   L S + G    RIG ECSKDD+++FQG   PLP+G+P + V+ILN+CASD
Sbjct: 51  ENRNGLSRKLLLSPDIGDGTKRIGEECSKDDVVVFQGSTVPLPNGVPAFTVEILNACASD 110

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           CS++ IHV CGWFSS RLVNPR+FRR+SYDDCLVNDGQ L PGQTLSFQYAN+F YPLSV
Sbjct: 111 CSVAEIHVSCGWFSSVRLVNPRVFRRLSYDDCLVNDGQPLAPGQTLSFQYANSFAYPLSV 170

Query: 162 SFVIC 167
           S V C
Sbjct: 171 SSVSC 175

[Close]

BLAST of ClCG01G021330 vs. TrEMBL
Match: A0A078C858_BRANA (BnaC05g28500D protein OS=Brassica napus GN=BnaC05g28500D PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43
Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           + R G+S   L S + G    RIG ECSKDD+++FQG   PLP+G+P + V+I+N+CASD
Sbjct: 51  KNRTGVSRKLLLSPDIGDGTKRIGEECSKDDLVVFQGSTVPLPNGVPAFTVEIINACASD 110

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           CS++ IHV CGWFSS RLVNPR+FRR+SYDDCLVNDGQ L PGQTLSFQYAN+F YPLSV
Sbjct: 111 CSVTEIHVSCGWFSSVRLVNPRVFRRLSYDDCLVNDGQPLSPGQTLSFQYANSFSYPLSV 170

Query: 162 SFVIC 167
           S V C
Sbjct: 171 SSVSC 175

[Close]

BLAST of ClCG01G021330 vs. TrEMBL
Match: A0A0D3CGN2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43
Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           + R G+S   L S + G    RIG ECSKDD+++FQG   PLP+G+P + V+I+N+CASD
Sbjct: 51  KNRTGVSRKLLLSPDIGDGTKRIGEECSKDDLVVFQGSTVPLPNGVPAFTVEIINACASD 110

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           CS++ IHV CGWFSS RLVNPR+FRR+SYDDCLVNDGQ L PGQTLSFQYAN+F YPLSV
Sbjct: 111 CSVTEIHVSCGWFSSVRLVNPRVFRRLSYDDCLVNDGQPLSPGQTLSFQYANSFSYPLSV 170

Query: 162 SFVIC 167
           S V C
Sbjct: 171 SSVSC 175

[Close]

BLAST of ClCG01G021330 vs. TAIR10
Match: AT1G32583.1 (AT1G32583.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-46
Identity = 82/125 (65.60%), Postives = 95/125 (76.00%), Query Frame = 1


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           C+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ LGPGQ+LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 162 SFVIC 167
           + V C
Sbjct: 174 ASVSC 178

[Close]

BLAST of ClCG01G021330 vs. TAIR10
Match: AT4G24972.1 (AT4G24972.1 tapetum determinant 1)

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-36
Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 50  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSI 109
           M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 110 SNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFV 168
           S IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+FV
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of ClCG01G021330 vs. TAIR10
Match: AT1G05835.1 (AT1G05835.1 PHD finger protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-08
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 1


Query: 92  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSF 151
           V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 152 QYANTFPY---PLSVSF 164
            Y+NT  +   PLS SF
Sbjct: 110 NYSNTHQFALRPLSWSF 124

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: gi|659079118|ref|XP_008440085.1| (PREDICTED: uncharacterized protein LOC103484668 isoform X1 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 2.9e-74
Identity = 141/165 (85.45%), Postives = 147/165 (89.09%), Query Frame = 1


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: gi|659079120|ref|XP_008440086.1| (PREDICTED: uncharacterized protein LOC103484668 isoform X2 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 4.9e-74
Identity = 141/165 (85.45%), Postives = 146/165 (88.48%), Query Frame = 1


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFL-------EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: gi|449434404|ref|XP_004134986.1| (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 6.4e-74
Identity = 141/166 (84.94%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCL F LT FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLWFLLTIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 164

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: gi|778720136|ref|XP_011658115.1| (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73
Identity = 141/166 (84.94%), Postives = 147/166 (88.55%), Query Frame = 1


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCL F LT FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLWFLLTIFL-------EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 162

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: gi|657958863|ref|XP_008370972.1| (PREDICTED: uncharacterized protein LOC103434408 [Malus domestica])

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-46
Identity = 98/157 (62.42%), Postives = 113/157 (71.97%), Query Frame = 1


Query: 25  FSEFKLVHLRVVRAAA---------RERRNGISGMSLQSSNSGKE------MNRIGSECS 84
           F   +L+HL  V  AA          E      G  LQ S+ G +      MNRIG+ CS
Sbjct: 27  FFAVELIHLGSVGEAAAGINRQVFSNENHTTGLGRKLQQSDEGGDGGPGGDMNRIGTSCS 86

Query: 85  KDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVS 144
           KDDI+IFQGQ  PLP+GIPTY VQILN+C S CSIS+IHV+CGWFSSARLVNPR+FRR  
Sbjct: 87  KDDIVIFQGQTAPLPNGIPTYTVQILNACVSGCSISDIHVRCGWFSSARLVNPRVFRRND 146

Query: 145 YDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVIC 167
           YDDCLVNDG+ALGPG+TLSFQYAN+F YPLSVS V+C
Sbjct: 147 YDDCLVNDGEALGPGETLSFQYANSFRYPLSVSSVVC 183

The following BLAST results are available for this feature:

BLAST of ClCG01G021330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TDL1_ARATH	3.6e-45	65.60	TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1	[more]
TPD1_ARATH	5.8e-35	56.10	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1	[more]
TDL1A_ORYSJ	3.9e-31	48.82	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1	[more]
TDL1B_ORYSJ	4.6e-24	44.35	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1	[more]
Y1583_ARATH	6.7e-07	44.16	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1	[more]

BLAST of ClCG01G021330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL27_CUCSA	4.4e-74	84.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511090 PE=4 SV=1	[more]
A0A078GK28_BRANA	4.3e-45	68.00	BnaA05g18070D protein OS=Brassica napus GN=BnaA05g18070D PE=4 SV=1	[more]
M4D124_BRARP	4.3e-45	68.00	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078C858_BRANA	1.1e-43	65.60	BnaC05g28500D protein OS=Brassica napus GN=BnaC05g28500D PE=4 SV=1	[more]
A0A0D3CGN2_BRAOL	1.1e-43	65.60	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of ClCG01G021330 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32583.1	2.0e-46	65.60	FUNCTIONS IN: molecular_function unknown	[more]
AT4G24972.1	3.3e-36	56.10	tapetum determinant 1	[more]
AT1G05835.1	3.8e-08	44.16	PHD finger protein	[more]

BLAST of ClCG01G021330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079118\|ref\|XP_008440085.1\|	2.9e-74	85.45	PREDICTED: uncharacterized protein LOC103484668 isoform X1 [Cucumis melo]	[more]
gi\|659079120\|ref\|XP_008440086.1\|	4.9e-74	85.45	PREDICTED: uncharacterized protein LOC103484668 isoform X2 [Cucumis melo]	[more]
gi\|449434404\|ref\|XP_004134986.1\|	6.4e-74	84.94	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis sativus]	[more]
gi\|778720136\|ref\|XP_011658115.1\|	1.1e-73	84.94	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis sativus]	[more]
gi\|657958863\|ref\|XP_008370972.1\|	3.3e-46	62.42	PREDICTED: uncharacterized protein LOC103434408 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009408	response to heat
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G021330.1	ClCG01G021330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 52..166 score: 3.6
None	No IPR available	PANTHER	PTHR33184:SF2	TPD1	coord: 52..166 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G021330	Csa6G511090	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G021330	MELO3C007447	Melon (DHL92) v3.5.1	mewcgB515
ClCG01G021330	Cla014393	Watermelon (97103) v1	wcgwmB141
ClCG01G021330	Cla97C01G020910	Watermelon (97103) v2	wcgwmbB089
ClCG01G021330	CSPI06G32890	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G021330	Cucsa.044660	Cucumber (Gy14) v1	cgywcgB022
ClCG01G021330	CmaCh03G005840	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G021330	CmoCh03G006100	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G021330	Lsi01G004920	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G021330	MELO3C007447.2	Melon (DHL92) v3.6.1	medwcgB510
ClCG01G021330	Carg00505	Silver-seed gourd	carwcgB0397
ClCG01G021330	CsaV3_6G048340	Cucumber (Chinese Long) v3	cucwcgB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G021330	Cucumber (Chinese Long) v3	cucwcgB029
ClCG01G021330	Watermelon (97103) v2	wcgwmbB091
ClCG01G021330	Wax gourd	wcgwgoB227
ClCG01G021330	Cucurbita maxima (Rimu)	cmawcgB349
ClCG01G021330	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G021330	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G021330	Wild cucumber (PI 183967)	cpiwcgB022
ClCG01G021330	Wild cucumber (PI 183967)	cpiwcgB030
ClCG01G021330	Cucumber (Chinese Long) v2	cuwcgB019
ClCG01G021330	Melon (DHL92) v3.5.1	mewcgB136
ClCG01G021330	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G021330	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G021330	Cucurbita pepo (Zucchini)	cpewcgB460
ClCG01G021330	Bottle gourd (USVL1VR-Ls)	lsiwcgB175
ClCG01G021330	Cucumber (Gy14) v2	cgybwcgB018
ClCG01G021330	Cucumber (Gy14) v2	cgybwcgB026
ClCG01G021330	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G021330	Silver-seed gourd	carwcgB0623