MELO3C007424 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007424
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ubiquitin-protein ligase, putative
Location	chr8 : 2707722 .. 2708975 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACCCTCACGACTCTCGTATTTTTGTTCTTGGGGCCTGGTCTTTTTCGAATTTCGTCCCCTTATGGGGCTCCGAGAATAATTAAGAACACAGAGGTGAGTTTCATCAAAATCTTTCATCGAACTCACGAGATCTCCGTGGCCATGGCTAAAGGTAATCGATCCTAATCCTAAATATTTGCATTTCCCCTCAACGGTTTAAATTCATTTTCAAGTTTTACCGATTTTCTTCACAAAATTTTTTGTTTCGGGATCGGAAAAATGAGTCTTCTCAGTGTCATTTTACAGGAAGCCGCCAGGCGAGAAAGAGAGGCTAGGACCATTTGGGGATTTCTTACCGATCAAATGGACGGCGTCGATGGCGGAGGAAGGCGGCGACCCAGTTTAAAACAAAGGCTAGGATTTAAAGTCATGGGCTGTTGTGGTGCCACTTGGGGTTTCCGGCCGCCGTCTGTTAGCGTCAGAGACGGCGGCGGAGAAGACGATGACCGGAGAGTACCGGATTTGGAAGTGATGAACACGCGCCGGGAGGAAAGGGAGTTGGATCGGAGTTGCTTGAGTCCGTTGTCGGTACAGTCGCCGGGGCCGTCCGGGATGAATTTGGCTACAGCTCTAGCGGCGGAGCGTCGTTTAAGAGCATCGCCACGTGGAGCGGAAGGGGGCATTGTGGAATTTAATAACAACGATTTTGACTCAGCGGTTGGAATGATGGAAACTGGAACGCCGTTGAGGGTGTCGTTGTTGCGGTTGCTGGAAGAAACAGAAGGCGGTTGCGACGGTGGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAAACGGGAAATGATTCGATGTGTTGCGTGTGCATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACCTTTTGTAGGGTTTGTTCGAGAGAGCTGTGGCTAAATCGAGGATCTTGCCCGCTCTGCAACCGTCCGATTATAGAGATACTCGATATATTTTGAAGGAGCATGCTAAGTAACGATGGGGAATGAGAACAGAGGATTGTTGGTGACCGGAAGGGGTTAGTGGTTTTTGCCTCAAGATTCGCGACAGACTGTTTTCATTGGACGGCACTGAACGACGGCCGTATCTGAGTGACATGTGGATGCGGGTGAGAAAACCTTTTCACCTCCGATAATAAAGTTTAATTAATAAGTTAATATGTTCGATGTTATTCATATAATTTTAAACTTTTATACAATGGGATCGAGAAACTCTTCTCTTCTCTT

mRNA sequence

AAGACCCTCACGACTCTCGTATTTTTGTTCTTGGGGCCTGGTCTTTTTCGAATTTCGTCCCCTTATGGGGCTCCGAGAATAATTAAGAACACAGAGGTGAGTTTCATCAAAATCTTTCATCGAACTCACGAGATCTCCGTGGCCATGGCTAAAGTGTCATTTTACAGGAAGCCGCCAGGCGAGAAAGAGAGGCTAGGACCATTTGGGGATTTCTTACCGATCAAATGGACGGCGTCGATGGCGGAGGAAGGCGGCGACCCAGTTTAAAACAAAGGCTAGGATTTAAAGTCATGGGCTGTTGTGGTGCCACTTGGGGTTTCCGGCCGCCGTCTGTTAGCGTCAGAGACGGCGGCGGAGAAGACGATGACCGGAGAGTACCGGATTTGGAAGTGATGAACACGCGCCGGGAGGAAAGGGAGTTGGATCGGAGTTGCTTGAGTCCGTTGTCGGTACAGTCGCCGGGGCCGTCCGGGATGAATTTGGCTACAGCTCTAGCGGCGGAGCGTCGTTTAAGAGCATCGCCACGTGGAGCGGAAGGGGGCATTGTGGAATTTAATAACAACGATTTTGACTCAGCGGTTGGAATGATGGAAACTGGAACGCCGTTGAGGGTGTCGTTGTTGCGGTTGCTGGAAGAAACAGAAGGCGGTTGCGACGGTGGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAAACGGGAAATGATTCGATGTGTTGCGTGTGCATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACCTTTTGTAGGGTTTGTTCGAGAGAGCTGTGGCTAAATCGAGGATCTTGCCCGCTCTGCAACCGTCCGATTATAGAGATACTCGATATATTTTGAAGGAGCATGCTAAGTAACGATGGGGAATGAGAACAGAGGATTGTTGGTGACCGGAAGGGGTTAGTGGTTTTTGCCTCAAGATTCGCGACAGACTGTTTTCATTGGACGGCACTGAACGACGGCCGTATCTGAGTGACATGTGGATGCGGGTGAGAAAACCTTTTCACCTCCGATAATAAAGTTTAATTAATAAGTTAATATGTTCGATGTTATTCATATAATTTTAAACTTTTATACAATGGGATCGAGAAACTCTTCTCTTCTCTT

Coding sequence (CDS)

ATGGACGGCGTCGATGGCGGAGGAAGGCGGCGACCCAGTTTAAAACAAAGGCTAGGATTTAAAGTCATGGGCTGTTGTGGTGCCACTTGGGGTTTCCGGCCGCCGTCTGTTAGCGTCAGAGACGGCGGCGGAGAAGACGATGACCGGAGAGTACCGGATTTGGAAGTGATGAACACGCGCCGGGAGGAAAGGGAGTTGGATCGGAGTTGCTTGAGTCCGTTGTCGGTACAGTCGCCGGGGCCGTCCGGGATGAATTTGGCTACAGCTCTAGCGGCGGAGCGTCGTTTAAGAGCATCGCCACGTGGAGCGGAAGGGGGCATTGTGGAATTTAATAACAACGATTTTGACTCAGCGGTTGGAATGATGGAAACTGGAACGCCGTTGAGGGTGTCGTTGTTGCGGTTGCTGGAAGAAACAGAAGGCGGTTGCGACGGTGGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAAACGGGAAATGATTCGATGTGTTGCGTGTGCATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACCTTTTGTAGGGTTTGTTCGAGAGAGCTGTGGCTAAATCGAGGATCTTGCCCGCTCTGCAACCGTCCGATTATAGAGATACTCGATATATTTTGA

Protein sequence

MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF*

Homology

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BLAST of MELO3C007424 vs. TrEMBL
Match: A0A0A0KMY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 7.0e-117
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDG+DGGGRRRPSLKQRLGFKVMGCCGATWGFRPPS SVRDGGGEDDDRRVPDLEVMNTR
Sbjct: 29  MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDDRRVPDLEVMNTR 88

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120
           REEREL+RSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEG IVEFNNNDFDSAVG
Sbjct: 89  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 148

Query: 121 MMETGTPLRVSLLRLLEETEGGCD--GGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFI 180
           MMETGTPLRVSLLRLLEET+GGCD  GGGNLGVAEKKR+ET NDSMCCVCMGRKKGAAFI
Sbjct: 149 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 208

Query: 181 PCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           PCGHTFCR+CSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 209 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 243

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BLAST of MELO3C007424 vs. TrEMBL
Match: A0A061GHE7_THECC (RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030318 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 127/220 (57.73%), Postives = 147/220 (66.82%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDGVD   RRR S K+RLGFK++GCCGATWG    ++SVRD    DD+  V + E  + +
Sbjct: 1   MDGVDRERRRR-SFKERLGFKIVGCCGATWGLGSTTISVRD----DDEVEVVEEEEADQQ 60

Query: 61  REEREL-------DRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNN 120
           RE+ E        D  C++P    SP  SGMNLA ALAAER  RA+     G       +
Sbjct: 61  REQVEATHSGHNPDPGCINP----SPVSSGMNLAAALAAERHFRAAQEPEGGNAAP--TS 120

Query: 121 DFDSAVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKK 180
           D  S  G+   GTPLRVSL+RLLEE +G C GG      EK   E G+DSMCCVCMG+KK
Sbjct: 121 DGQSNAGLRSPGTPLRVSLMRLLEEADGFCGGGEQ----EKGGVEMGSDSMCCVCMGKKK 180

Query: 181 GAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           GAAFIPCGHTFCRVCSRELWLNRGSCPLCNR I+EILDIF
Sbjct: 181 GAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 205

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BLAST of MELO3C007424 vs. TrEMBL
Match: V4W9T1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.7e-55
Identity = 123/219 (56.16%), Postives = 145/219 (66.21%), Query Frame = 1


Query: 1   MDGVDGGGRRRP---SLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVM 60
           MDGVD   R R    SLK+RLG K MGCCGATWGFRP ++++ D  GE+  +R  + E  
Sbjct: 29  MDGVDSIRRERGRGRSLKERLGLKSMGCCGATWGFRPNTINLSDSEGEEQQQRHLNQERS 88

Query: 61  NTRRE---ERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNND 120
            +  +   + E    C+S + + S   SGMNLA ALAAER LR++      G    NN+ 
Sbjct: 89  TSSAQNQPDNETVPVCMSRIPLIS---SGMNLAAALAAERHLRSADGANPAGPTVINNDH 148

Query: 121 FDSAVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKG 180
                G  + GTPLRVSL+RLL ETEG CDG           E+ GNDSMCCVCMGRKKG
Sbjct: 149 NVGPTGT-KRGTPLRVSLMRLLAETEG-CDG----------EEKAGNDSMCCVCMGRKKG 208

Query: 181 AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           AAFIPCGHTFCRVCSRE+WLNRGSCPLCNR I+EILDIF
Sbjct: 209 AAFIPCGHTFCRVCSREMWLNRGSCPLCNRSILEILDIF 232

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BLAST of MELO3C007424 vs. TrEMBL
Match: A0A022QG81_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013644mg PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.2e-53
Identity = 116/221 (52.49%), Postives = 144/221 (65.16%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDD-------DRRVPD 60
           MDG D   R RPSLK+RLG K  GCCG+TWG  P ++SVRD   E++       D   P+
Sbjct: 1   MDGEDRTVRSRPSLKERLGLKAFGCCGSTWGLGPTTISVRDDDQEEEEEEEGTADTMSPE 60

Query: 61  LEVMNTRREERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGI-VEFNN 120
            +V+N  +   E   S   P   QSP  +GMNLA ALAAER++RA+     GG  +  + 
Sbjct: 61  TDVVNVDQNPTETGAS--PPCVFQSPATTGMNLAAALAAERQMRAALDSDNGGASLSPSP 120

Query: 121 NDFDSAVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRK 180
              +  V +   GTP RVSL+RLLEET+G      +L +  +   E G DS+CCVCMGRK
Sbjct: 121 PRHNRVVSVTAPGTPSRVSLMRLLEETDGY-----DLEMRREVDGEGGCDSVCCVCMGRK 180

Query: 181 KGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           +GAAFIPCGHTFCRVCSRELWLNRG+CPLCNR I+EILDI+
Sbjct: 181 RGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIY 214

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BLAST of MELO3C007424 vs. TrEMBL
Match: A0A067GSG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026976mg PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.4e-53
Identity = 121/217 (55.76%), Postives = 144/217 (66.36%), Query Frame = 1


Query: 1   MDGVDGGGRRRP-SLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNT 60
           MDGVD   R R  +LK+RLG K MGCCGAT GFRP ++++ D  GE+  +R  + E   +
Sbjct: 29  MDGVDSIRRGRGRNLKERLGLKSMGCCGATCGFRPNTINLSDSEGEEQQQRHLNQERSTS 88

Query: 61  RRE---ERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFD 120
             +   + E    C+S + + S   SGMNLA ALAAER LR++      G    NN+   
Sbjct: 89  SAQNQPDNETVPVCMSRIPLIS---SGMNLAAALAAERHLRSADGTNPAGPTVINNDHNV 148

Query: 121 SAVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAA 180
              G  + GTPLRVSL+RLL ETEG CDG           E+ GNDSMCCVCMGRKKGAA
Sbjct: 149 GPTGT-KRGTPLRVSLMRLLAETEG-CDG----------EEKAGNDSMCCVCMGRKKGAA 208

Query: 181 FIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           FIPCGHTFCRVCSRE+WLNRGSCPLCNR I+EILDIF
Sbjct: 209 FIPCGHTFCRVCSREMWLNRGSCPLCNRSILEILDIF 230

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BLAST of MELO3C007424 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-47
Identity = 110/224 (49.11%), Postives = 124/224 (55.36%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDG+D   RR+ +LK+RLGFK +GCCG TWG R  S +     GEDDD    +  V  + 
Sbjct: 29  MDGLDRSRRRKRTLKERLGFKRIGCCGPTWGLRLTSNT-----GEDDDEPFENRLVSGSD 88

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120
                          V  P   GMNLATALAAER  R     A G +             
Sbjct: 89  H--------------VTGPLNQGMNLATALAAERNYRTEETEASGSL------------- 148

Query: 121 MMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREET-----------GNDSMCCVCM 180
                TPL+VSL+RLLEET         + V E + E              NDS+CCVCM
Sbjct: 149 -----TPLKVSLMRLLEET------AERVVVEENETERVTASASSTVRGVNNDSVCCVCM 208

Query: 181 GRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           GRKKGAAFIPCGHTFCRVCSRE+WLNRGSCPLCNRPIIEILDI+
Sbjct: 209 GRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209

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BLAST of MELO3C007424 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 7.9e-43
Identity = 102/208 (49.04%), Postives = 115/208 (55.29%), Query Frame = 1


Query: 9   RRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELDR 68
           RR+ +LK+RL FK +GCCG TW  R  + +        DD             EE +++ 
Sbjct: 38  RRKRTLKERLRFKCIGCCGPTWNLRLTNNTTLHSPTSRDDEI-----------EELQIET 97

Query: 69  SCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVGMMETGTPL 128
             +  L       +GMNLATAL AER  R     AE  +                  TP 
Sbjct: 98  GLV--LESDHGSGTGMNLATALEAERYNRGESTEAEADM------------------TPR 157

Query: 129 RVSLLRLLEETEGGC---DGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFIPCGHTFC 188
           RVSL+RLLEET       DG     +       TGNDS+CCVCMGRKKGAAFIPCGHTFC
Sbjct: 158 RVSLMRLLEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFC 214

Query: 189 RVCSRELWLNRGSCPLCNRPIIEILDIF 214
           RVCSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 218 RVCSRELWLNRGSCPLCNRPIIEILDIF 214

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BLAST of MELO3C007424 vs. TAIR10
Match: AT1G62370.1 (AT1G62370.1 RING/U-box superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 4.0e-31
Identity = 82/215 (38.14%), Postives = 109/215 (50.70%), Query Frame = 1


Query: 2   DGVDGGGR---RRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMN 61
           D ++GG R   +  +LKQRL F  +GCCG     R           +DDD      +V++
Sbjct: 29  DQINGGDRTMSKWTTLKQRLRFDWVGCCGKPLTLRLRQAETPIVVDDDDDEEESQNQVVD 88

Query: 62  TRREERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSA 121
                   +  CL+  S +       NLA ALA ER    +                ++A
Sbjct: 89  FSDPGTGTELDCLTRGSTR-------NLAEALAEERLAHVTEE--------------ETA 148

Query: 122 VGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFI 181
           V         +V L+RLL E++G CD               GND +CCVCMGR+KGAAFI
Sbjct: 149 V--------TKVPLMRLLAESDG-CDSTTTW---------LGNDPLCCVCMGREKGAAFI 204

Query: 182 PCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           PCGHT+CRVCSRE+W+NRG+CPLCNR I ++LD++
Sbjct: 209 PCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204

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BLAST of MELO3C007424 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 9.7e-25
Identity = 56/104 (53.85%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 127 PLRVSLLRLLEETEG-----------------GCDGGGNLGVAEKKREETGNDSMCCVCM 186
           P R+SL+ LLE+ +G                 GCDGGG   VA     E G    CCVCM
Sbjct: 167 PPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGE-AVAVTGAAELG----CCVCM 226

Query: 187 GRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
            R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN  I+++LDIF
Sbjct: 227 VRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265

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BLAST of MELO3C007424 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 1


Query: 127 PLRVSLLRLLEETEGGCDGGGNLGVAEKK-REETGNDSMCCVCMGRKKGAAFIPCGHTFC 186
           P R+SL+ LLEE EG        G AE++    T  +  CCVCM R KGAAFIPCGHTFC
Sbjct: 163 PARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFC 222

Query: 187 RVCSRELWLNRGSCPLCNRPIIEILDIF 214
           R+CSRELW+ RG+CPLCN  I+E+LD+F
Sbjct: 223 RLCSRELWVQRGNCPLCNTTILEVLDLF 250

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BLAST of MELO3C007424 vs. NCBI nr
Match: gi|659079058|ref|XP_008440052.1| (PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-122
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR
Sbjct: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120
           REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG
Sbjct: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120

Query: 121 MMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFIPC 180
           MMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFIPC
Sbjct: 121 MMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFIPC 180

Query: 181 GHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           GHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 181 GHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 213

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BLAST of MELO3C007424 vs. NCBI nr
Match: gi|700193867|gb|KGN49071.1| (hypothetical protein Csa_6G512860 [Cucumis sativus])

HSP 1 Score: 427.9 bits (1099), Expect = 1.0e-116
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDG+DGGGRRRPSLKQRLGFKVMGCCGATWGFRPPS SVRDGGGEDDDRRVPDLEVMNTR
Sbjct: 29  MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDDRRVPDLEVMNTR 88

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120
           REEREL+RSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEG IVEFNNNDFDSAVG
Sbjct: 89  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 148

Query: 121 MMETGTPLRVSLLRLLEETEGGCD--GGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFI 180
           MMETGTPLRVSLLRLLEET+GGCD  GGGNLGVAEKKR+ET NDSMCCVCMGRKKGAAFI
Sbjct: 149 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 208

Query: 181 PCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           PCGHTFCR+CSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 209 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 243

[Close]

BLAST of MELO3C007424 vs. NCBI nr
Match: gi|778720231|ref|XP_004134982.2| (PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus])

HSP 1 Score: 427.9 bits (1099), Expect = 1.0e-116
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDG+DGGGRRRPSLKQRLGFKVMGCCGATWGFRPPS SVRDGGGEDDDRRVPDLEVMNTR
Sbjct: 1   MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDDRRVPDLEVMNTR 60

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120
           REEREL+RSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEG IVEFNNNDFDSAVG
Sbjct: 61  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 120

Query: 121 MMETGTPLRVSLLRLLEETEGGCD--GGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFI 180
           MMETGTPLRVSLLRLLEET+GGCD  GGGNLGVAEKKR+ET NDSMCCVCMGRKKGAAFI
Sbjct: 121 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 180

Query: 181 PCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           PCGHTFCR+CSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 181 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 215

[Close]

BLAST of MELO3C007424 vs. NCBI nr
Match: gi|747096202|ref|XP_011096011.1| (PREDICTED: uncharacterized protein LOC105175305 isoform X1 [Sesamum indicum])

HSP 1 Score: 235.3 bits (599), Expect = 9.6e-59
Identity = 132/219 (60.27%), Postives = 151/219 (68.95%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDGV G   RRPSLK+RLG K +GCCGATWG  P ++SVRDG  ED     P  EV+N  
Sbjct: 33  MDGV-GRSLRRPSLKERLGLKGLGCCGATWGVGPTTISVRDGDEEDGGPLSPPTEVINVA 92

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIV---EFNNNDFDS 120
           +E  E   +    + VQSP P+GMNLA ALAAER+LRA      GG +     N+N   S
Sbjct: 93  QEPIENAPAPPCVVVVQSPVPAGMNLAAALAAERQLRAVVDSDNGGAILTPRPNSNGERS 152

Query: 121 ---AVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKG 180
              A  +   GTP RVSL+RLLEET+G  DG  N    E  RE  G+DS+CCVCMGRKKG
Sbjct: 153 PTPAPAITAPGTPSRVSLMRLLEETDG-YDGEMNKKQEEDHRE--GSDSVCCVCMGRKKG 212

Query: 181 AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPI+EILDI+
Sbjct: 213 AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPILEILDIY 247

[Close]

BLAST of MELO3C007424 vs. NCBI nr
Match: gi|747096204|ref|XP_011096012.1| (PREDICTED: uncharacterized protein LOC105175305 isoform X2 [Sesamum indicum])

HSP 1 Score: 235.3 bits (599), Expect = 9.6e-59
Identity = 132/219 (60.27%), Postives = 151/219 (68.95%), Query Frame = 1


Query: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60
           MDGV G   RRPSLK+RLG K +GCCGATWG  P ++SVRDG  ED     P  EV+N  
Sbjct: 1   MDGV-GRSLRRPSLKERLGLKGLGCCGATWGVGPTTISVRDGDEEDGGPLSPPTEVINVA 60

Query: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIV---EFNNNDFDS 120
           +E  E   +    + VQSP P+GMNLA ALAAER+LRA      GG +     N+N   S
Sbjct: 61  QEPIENAPAPPCVVVVQSPVPAGMNLAAALAAERQLRAVVDSDNGGAILTPRPNSNGERS 120

Query: 121 ---AVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKG 180
              A  +   GTP RVSL+RLLEET+G  DG  N    E  RE  G+DS+CCVCMGRKKG
Sbjct: 121 PTPAPAITAPGTPSRVSLMRLLEETDG-YDGEMNKKQEEDHRE--GSDSVCCVCMGRKKG 180

Query: 181 AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
           AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPI+EILDI+
Sbjct: 181 AAFIPCGHTFCRVCSRELWLNRGSCPLCNRPILEILDIY 215

The following BLAST results are available for this feature:

BLAST of MELO3C007424 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMY7_CUCSA	7.0e-117	95.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1	[more]
A0A061GHE7_THECC	1.3e-57	57.73	RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030...	[more]
V4W9T1_9ROSI	7.7e-55	56.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1	[more]
A0A022QG81_ERYGU	7.2e-53	52.49	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013644mg PE=4 SV=1	[more]
A0A067GSG4_CITSI	9.4e-53	55.76	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026976mg PE=4 SV=1	[more]

BLAST of MELO3C007424 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03965.1	1.4e-47	49.11	RING/U-box superfamily protein	[more]
AT4G22250.1	7.9e-43	49.04	RING/U-box superfamily protein	[more]
AT1G62370.1	4.0e-31	38.14	RING/U-box superfamily protein	[more]
AT4G13100.2	9.7e-25	53.85	RING/U-box superfamily protein	[more]
AT3G25030.1	1.3e-24	59.09	RING/U-box superfamily protein	[more]

BLAST of MELO3C007424 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079058\|ref\|XP_008440052.1\|	2.7e-122	100.00	PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo]	[more]
gi\|700193867\|gb\|KGN49071.1\|	1.0e-116	95.35	hypothetical protein Csa_6G512860 [Cucumis sativus]	[more]
gi\|778720231\|ref\|XP_004134982.2\|	1.0e-116	95.35	PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus]	[more]
gi\|747096202\|ref\|XP_011096011.1\|	9.6e-59	60.27	PREDICTED: uncharacterized protein LOC105175305 isoform X1 [Sesamum indicum]	[more]
gi\|747096204\|ref\|XP_011096012.1\|	9.6e-59	60.27	PREDICTED: uncharacterized protein LOC105175305 isoform X2 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007424T1	MELO3C007424T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 165..202 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 165..203 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 153..207 score: 7.6
None	No IPR available	PANTHER	PTHR12183	UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN	coord: 117..213 score: 1.0E-30coord: 1..74 score: 1.0
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 162..208 score: 1.5
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 157..210 score: 3.06

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007424	Csa6G512860	Cucumber (Chinese Long) v2	cumeB507
MELO3C007424	Cla014415	Watermelon (97103) v1	mewmB572
MELO3C007424	ClCG01G021600	Watermelon (Charleston Gray)	mewcgB515
MELO3C007424	Cla97C01G021190	Watermelon (97103) v2	mewmbB515
MELO3C007424	Bhi03G000481	Wax gourd	mewgoB635
MELO3C007424	CSPI06G33180	Wild cucumber (PI 183967)	cpimeB512
MELO3C007424	Cucsa.044890	Cucumber (Gy14) v1	cgymeB027
MELO3C007424	CmaCh03G005610	Cucurbita maxima (Rimu)	cmameB611
MELO3C007424	CmaCh07G003360	Cucurbita maxima (Rimu)	cmameB798
MELO3C007424	CmoCh07G003250	Cucurbita moschata (Rifu)	cmomeB782
MELO3C007424	CmoCh03G005870	Cucurbita moschata (Rifu)	cmomeB600
MELO3C007424	Lsi01G004640	Bottle gourd (USVL1VR-Ls)	lsimeB149
MELO3C007424	Cp4.1LG10g09770	Cucurbita pepo (Zucchini)	cpemeB071
MELO3C007424	Cp4.1LG19g08010	Cucurbita pepo (Zucchini)	cpemeB457
MELO3C007424	CsGy6G032750	Cucumber (Gy14) v2	cgybmeB445
MELO3C007424	Carg13668	Silver-seed gourd	carmeB0918
MELO3C007424	Carg07864	Silver-seed gourd	carmeB0642
MELO3C007424	CsaV3_6G048640	Cucumber (Chinese Long) v3	cucmeB520

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007424	Watermelon (97103) v2	mewmbB514
MELO3C007424	Bottle gourd (USVL1VR-Ls)	lsimeB227