CSPI06G33180 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G33180
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RING/U-box superfamily protein
Location	Chr6 : 27662590 .. 27663567 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTTCTCAGTGTCATCTTACAGGAAGCCGCCAGGCGAGAAAGAGAGGCTAGGACCATTTGGGGATTTCTTACCGATCAAATGGACGGCATCGATGGTGGAGGAAGGCGGCGACCCAGTTTAAAGCAACGGCTGGGATTTAAGGTCATGGGCTGTTGTGGTGCCACTTGGGGTTTCCGACCGCCGTCTGTTAGCGTCAGAGACGGCGGCGGAGAAGACGATGACCGGAGAGTACCGGATTTGGAGGTGATGAACACGCGCCGGGAGGAAAGGGAGTTGAATCGGAGTTGCTTGAGTCCGTTGTCCGTTCAGTCGCCGGGACCGTCCGGGATGAATTTGGCTACAGCTCTAGCGGCAGAGCGTCGTTTAAGAGCATCGCCACGTGGAGCGGAAGGGGACATTGTGGAATTTAATAACAACGATTTTGACTCAGCGGTTGGAATGATGGAAACCGGAACGCCGTTGAGAGTGTCGTTGTTGCGGTTACTGGAAGAAACAGATGGCGGTTGTGACGACGGTGGTGGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGACGAAACAAGGAATGATTCGATGTGTTGCGTGTGCATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGATTTGTTCGAGAGAGCTGTGGCTTAATCGAGGATCTTGCCCCCTTTGCAACCGTCCGATTATAGAGATTCTTGATATATTTTGATGGAACCATGCTAAGTAACGATGAGGATGAGAACAGACGATTGTTGGTGACGGAAAGAGGTTAGTGGTTTTGCCTCAAGATTCGCGACAGACTGTTTTCATTGGACGGCACTGAACGATGGCCGTATATTGGTGACATGTGGATGCGCTGCGGGTGAGGAAACTTTTTCACGTCCAATAATAAAGTTTAATAGATAAATTAATATTTTCGATGTAACTCATAATTTCAAACTTTTTATACAATGGG

mRNA sequence

ATGAGTCTTCTCAGTGTCATCTTACAGGAAGCCGCCAGGCGAGAAAGAGAGGCTAGGACCATTTGGGGATTTCTTACCGATCAAATGGACGGCATCGATGGTGGAGGAAGGCGGCGACCCAGTTTAAAGCAACGGCTGGGATTTAAGGTCATGGGCTGTTGTGGTGCCACTTGGGGTTTCCGACCGCCGTCTGTTAGCGTCAGAGACGGCGGCGGAGAAGACGATGACCGGAGAGTACCGGATTTGGAGGTGATGAACACGCGCCGGGAGGAAAGGGAGTTGAATCGGAGTTGCTTGAGTCCGTTGTCCGTTCAGTCGCCGGGACCGTCCGGGATGAATTTGGCTACAGCTCTAGCGGCAGAGCGTCGTTTAAGAGCATCGCCACGTGGAGCGGAAGGGGACATTGTGGAATTTAATAACAACGATTTTGACTCAGCGGTTGGAATGATGGAAACCGGAACGCCGTTGAGAGTGTCGTTGTTGCGGTTACTGGAAGAAACAGATGGCGGTTGTGACGACGGTGGTGGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGACGAAACAAGGAATGATTCGATGTGTTGCGTGTGCATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGATTTGTTCGAGAGAGCTGTGGCTTAATCGAGGATCTTGCCCCCTTTGCAACCGTCCGATTATAGAGATTCTTGATATATTTTGA

Coding sequence (CDS)

ATGAGTCTTCTCAGTGTCATCTTACAGGAAGCCGCCAGGCGAGAAAGAGAGGCTAGGACCATTTGGGGATTTCTTACCGATCAAATGGACGGCATCGATGGTGGAGGAAGGCGGCGACCCAGTTTAAAGCAACGGCTGGGATTTAAGGTCATGGGCTGTTGTGGTGCCACTTGGGGTTTCCGACCGCCGTCTGTTAGCGTCAGAGACGGCGGCGGAGAAGACGATGACCGGAGAGTACCGGATTTGGAGGTGATGAACACGCGCCGGGAGGAAAGGGAGTTGAATCGGAGTTGCTTGAGTCCGTTGTCCGTTCAGTCGCCGGGACCGTCCGGGATGAATTTGGCTACAGCTCTAGCGGCAGAGCGTCGTTTAAGAGCATCGCCACGTGGAGCGGAAGGGGACATTGTGGAATTTAATAACAACGATTTTGACTCAGCGGTTGGAATGATGGAAACCGGAACGCCGTTGAGAGTGTCGTTGTTGCGGTTACTGGAAGAAACAGATGGCGGTTGTGACGACGGTGGTGGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGACGAAACAAGGAATGATTCGATGTGTTGCGTGTGCATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGATTTGTTCGAGAGAGCTGTGGCTTAATCGAGGATCTTGCCCCCTTTGCAACCGTCCGATTATAGAGATTCTTGATATATTTTGA

Homology

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BLAST of CSPI06G33180 vs. Swiss-Prot
Match: IAP4_OSHVF (Putative apoptosis inhibitor ORF106 OS=Ostreid herpesvirus 1 (isolate France) GN=ORF106 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.7e-07
Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 1


Query: 148 GMMETGTPLRVSLLRLLEETDGGCD---DGGGGNLGVAE----KKRDETRNDSMCCVCMG 207
           G +E        +LR +++ +GG D   DGGGG  GV E     K  E      C  C  
Sbjct: 354 GWLEFNPDKIPKVLRYIDD-EGGEDKEEDGGGG--GVIEFPKNNKEVENPKRGSCKACYE 413

Query: 208 RKKGAAFIPCGHTF-CRICSRELWLN---RGSCPLCNRPIIEILDIF 244
           RK   AFIPCGH F C IC+ E++ +   +  CP+C   + ++  IF
Sbjct: 414 RKADIAFIPCGHVFSCNICTMEMFASYKKKKRCPMCRVHVEKVQKIF 457

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BLAST of CSPI06G33180 vs. Swiss-Prot
Match: LUL4_ARATH (Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 28/80 (35.00%), Postives = 39/80 (48.75%), Query Frame = 1


Query: 164 LEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHT-FCRICSREL 223
           L E  G    G    L       DE+ + + C +CM   K  A +PC H   C  C++EL
Sbjct: 278 LRELYGSTTQGAASGL-------DESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKEL 337

Query: 224 WLNRGSCPLCNRPIIEILDI 243
            L    CP+C +PI E+L+I
Sbjct: 338 RLQSNKCPICRQPIEELLEI 350

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BLAST of CSPI06G33180 vs. TrEMBL
Match: A0A0A0KMY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 3.4e-139
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF
Sbjct: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60

Query: 61  RPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120
           RPPS SVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA
Sbjct: 61  RPPSDSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120

Query: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180
           ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG
Sbjct: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180

Query: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240
           VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL
Sbjct: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240

Query: 241 DIF 244
           DIF
Sbjct: 241 DIF 243

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BLAST of CSPI06G33180 vs. TrEMBL
Match: W9RJS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014139 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.0e-60
Identity = 139/254 (54.72%), Postives = 163/254 (64.17%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MS L VILQE+ RREREARTI  FL +QMD  D    R+ SLK+RLG   MGCCGATWGF
Sbjct: 1   MSQLGVILQESVRREREARTILCFLREQMDVADEERGRKRSLKERLGLTGMGCCGATWGF 60

Query: 61  RPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQS----PGPSGMNLAT 120
           RP ++SV D    ++ ++          +EE  L+ +  +P  + S    PGPS MNLA 
Sbjct: 61  RPTTISVLDDDEIEEQQQ----------QEEHHLDPTANNPGPICSDPDPPGPS-MNLAA 120

Query: 121 ALAAERRLRAS---PRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCD- 180
           ALAAER+LR S    RG  GD    +        G    GTP+RVSL+RLLEETDG    
Sbjct: 121 ALAAERQLRTSNDNERGNTGDETTGSRTR-----GSTAPGTPMRVSLMRLLEETDGRDAM 180

Query: 181 ---DGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSC 240
               G GG +G           DS+CCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRG+C
Sbjct: 181 TERSGAGGGVGSC---------DSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGAC 229

Query: 241 PLCNRPIIEILDIF 244
           PLCNRPI+EILDIF
Sbjct: 241 PLCNRPILEILDIF 229

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BLAST of CSPI06G33180 vs. TrEMBL
Match: V4W9T1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 134/249 (53.82%), Postives = 162/249 (65.06%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRP---SLKQRLGFKVMGCCGAT 60
           MS L VILQE+  RERE  TI   L ++MDG+D   R R    SLK+RLG K MGCCGAT
Sbjct: 1   MSQLRVILQESLDRERETITILALLREKMDGVDSIRRERGRGRSLKERLGLKSMGCCGAT 60

Query: 61  WGFRPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRS---CLSPLSVQSPGPSGMNL 120
           WGFRP ++++ D  GE+  +R  + E   +  + +  N +   C+S + + S   SGMNL
Sbjct: 61  WGFRPNTINLSDSEGEEQQQRHLNQERSTSSAQNQPDNETVPVCMSRIPLIS---SGMNL 120

Query: 121 ATALAAERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDG 180
           A ALAAER LR S  GA        NND +      + GTPLRVSL+RLL ET+ GCD  
Sbjct: 121 AAALAAERHLR-SADGANPAGPTVINNDHNVGPTGTKRGTPLRVSLMRLLAETE-GCDG- 180

Query: 181 GGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNR 240
                       ++  NDSMCCVCMGRKKGAAFIPCGHTFCR+CSRE+WLNRGSCPLCNR
Sbjct: 181 -----------EEKAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNR 232

Query: 241 PIIEILDIF 244
            I+EILDIF
Sbjct: 241 SILEILDIF 232

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BLAST of CSPI06G33180 vs. TrEMBL
Match: I1KNH8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G264100 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 129/243 (53.09%), Postives = 157/243 (64.61%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MS L +ILQE+ R ERE RTI G LT+QMDG+D   RRR +LK+RL F  +GCCGATW F
Sbjct: 1   MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIGCCGATWVF 60

Query: 61  RPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120
           RP  +   +GGG    +     +  N  ++    +   +SP    SP  + MNLA ALAA
Sbjct: 61  RP--IVREEGGGAQAHQ-----QQTNAAQDPNPNDPKYVSP----SPSGTSMNLAAALAA 120

Query: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180
           ER+LR      EG+              ++  GTPLRVSL+RLLEET+GG  + GGG +G
Sbjct: 121 ERQLR----DGEGE-----------GRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVG 180

Query: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240
                     ND +CCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRG+CPLCNR I+EIL
Sbjct: 181 ----------NDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEIL 207

Query: 241 DIF 244
           DIF
Sbjct: 241 DIF 207

[Close]

BLAST of CSPI06G33180 vs. TrEMBL
Match: A0A067GSG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026976mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-57
Identity = 131/247 (53.04%), Postives = 160/247 (64.78%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRP-SLKQRLGFKVMGCCGATWG 60
           MS L VILQE+  RERE  TI   L ++MDG+D   R R  +LK+RLG K MGCCGAT G
Sbjct: 1   MSQLRVILQESLDRERETITILALLREKMDGVDSIRRGRGRNLKERLGLKSMGCCGATCG 60

Query: 61  FRPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRS---CLSPLSVQSPGPSGMNLAT 120
           FRP ++++ D  GE+  +R  + E   +  + +  N +   C+S + + S   SGMNLA 
Sbjct: 61  FRPNTINLSDSEGEEQQQRHLNQERSTSSAQNQPDNETVPVCMSRIPLIS---SGMNLAA 120

Query: 121 ALAAERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGG 180
           ALAAER LR S  G         NND +      + GTPLRVSL+RLL ET+ GCD    
Sbjct: 121 ALAAERHLR-SADGTNPAGPTVINNDHNVGPTGTKRGTPLRVSLMRLLAETE-GCDG--- 180

Query: 181 GNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPI 240
                     ++  NDSMCCVCMGRKKGAAFIPCGHTFCR+CSRE+WLNRGSCPLCNR I
Sbjct: 181 ---------EEKAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNRSI 230

Query: 241 IEILDIF 244
           +EILDIF
Sbjct: 241 LEILDIF 230

[Close]

BLAST of CSPI06G33180 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-50
Identity = 119/255 (46.67%), Postives = 136/255 (53.33%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MS L V   +A     ++ T    L  QMDG+D   RR+ +LK+RLGFK +GCCG TWG 
Sbjct: 1   MSQLGVETSQAQPETPQSTTFLDLLRLQMDGLDRSRRRKRTLKERLGFKRIGCCGPTWGL 60

Query: 61  RPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120
           R  S +     GEDDD              E   NR       V  P   GMNLATALAA
Sbjct: 61  RLTSNT-----GEDDD--------------EPFENRLVSGSDHVTGPLNQGMNLATALAA 120

Query: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180
           ER  R     A G +                  TPL+VSL+RLLEET             
Sbjct: 121 ERNYRTEETEASGSL------------------TPLKVSLMRLLEET---------AERV 180

Query: 181 VAEKKRDE------------TRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGS 240
           V E+   E              NDS+CCVCMGRKKGAAFIPCGHTFCR+CSRE+WLNRGS
Sbjct: 181 VVEENETERVTASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGS 209

Query: 241 CPLCNRPIIEILDIF 244
           CPLCNRPIIEILDI+
Sbjct: 241 CPLCNRPIIEILDIY 209

[Close]

BLAST of CSPI06G33180 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 5.6e-45
Identity = 111/236 (47.03%), Postives = 124/236 (52.54%), Query Frame = 1


Query: 9   QEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVR 68
           Q      R   T    L  QM G D   RR+ +LK+RL FK +GCCG TW  R  + +  
Sbjct: 11  QRMTETHRTTTTFLDLLRRQMSGHDLT-RRKRTLKERLRFKCIGCCGPTWNLRLTNNTTL 70

Query: 69  DGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASP 128
                 DD             E  EL       L       +GMNLATAL AER  R   
Sbjct: 71  HSPTSRDD-------------EIEELQIETGLVLESDHGSGTGMNLATALEAERYNRGES 130

Query: 129 RGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEET-DGGCDDGGGGNLGVAEKKRD 188
             AE D+                  TP RVSL+RLLEET +   DD G     +      
Sbjct: 131 TEAEADM------------------TPRRVSLMRLLEETAEKIVDDDGKETEILTASIGT 190

Query: 189 ETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 244
            T NDS+CCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 191 LTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214

[Close]

BLAST of CSPI06G33180 vs. TAIR10
Match: AT1G62370.1 (AT1G62370.1 RING/U-box superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 93/246 (37.80%), Postives = 126/246 (51.22%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGR---RRPSLKQRLGFKVMGCCGAT 60
           MS L  +L+E+    R  RT+   L ++ D I+GG R   +  +LKQRL F  +GCCG  
Sbjct: 1   MSQLGDLLRESEDGTRSERTMMMSLLEE-DQINGGDRTMSKWTTLKQRLRFDWVGCCGKP 60

Query: 61  WGFRPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATA 120
              R           +DDD      +V++           CL+  S +       NLA A
Sbjct: 61  LTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCLTRGSTR-------NLAEA 120

Query: 121 LAAERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGG 180
           LA ER    +                ++AV         +V L+RLL E+DG CD     
Sbjct: 121 LAEERLAHVTEE--------------ETAV--------TKVPLMRLLAESDG-CDSTTTW 180

Query: 181 NLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPII 240
            LG          ND +CCVCMGR+KGAAFIPCGHT+CR+CSRE+W+NRG+CPLCNR I 
Sbjct: 181 -LG----------NDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIF 204

Query: 241 EILDIF 244
           ++LD++
Sbjct: 241 DVLDLY 204

[Close]

BLAST of CSPI06G33180 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 9.3e-24
Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 1


Query: 155 PLRVSLLRLLEETDGGCD----DGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPC 214
           P R+SL+ LLEE +G       DG        E+    T  +  CCVCM R KGAAFIPC
Sbjct: 163 PARMSLMELLEENEGQMSFVSVDGEA-----EEEVAAVTAAEISCCVCMVRSKGAAFIPC 222

Query: 215 GHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 244
           GHTFCR+CSRELW+ RG+CPLCN  I+E+LD+F
Sbjct: 223 GHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of CSPI06G33180 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 55/108 (50.93%), Postives = 64/108 (59.26%), Query Frame = 1


Query: 155 PLRVSLLRLLEETDG-----------------GCDDGGGGNL--GVAEKKRDETRNDSMC 214
           P R+SL+ LLE+ DG                 GCD GG      G AE           C
Sbjct: 167 PPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELG---------C 226

Query: 215 CVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 244
           CVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN  I+++LDIF
Sbjct: 227 CVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265

[Close]

BLAST of CSPI06G33180 vs. NCBI nr
Match: gi|700193867|gb|KGN49071.1| (hypothetical protein Csa_6G512860 [Cucumis sativus])

HSP 1 Score: 502.3 bits (1292), Expect = 4.8e-139
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF
Sbjct: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60

Query: 61  RPPSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120
           RPPS SVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA
Sbjct: 61  RPPSDSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120

Query: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180
           ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG
Sbjct: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180

Query: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240
           VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL
Sbjct: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240

Query: 241 DIF 244
           DIF
Sbjct: 241 DIF 243

[Close]

BLAST of CSPI06G33180 vs. NCBI nr
Match: gi|778720231|ref|XP_004134982.2| (PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 4.8e-123
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 1


Query: 29  MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 88
           MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPS SVRDGGGEDDDRRVPDLEVMNTR
Sbjct: 1   MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDDRRVPDLEVMNTR 60

Query: 89  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 148
           REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG
Sbjct: 61  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 120

Query: 149 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 208
           MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI
Sbjct: 121 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 180

Query: 209 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 244
           PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 181 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 215

[Close]

BLAST of CSPI06G33180 vs. NCBI nr
Match: gi|659079058|ref|XP_008440052.1| (PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 1.0e-117
Identity = 206/215 (95.81%), Postives = 211/215 (98.14%), Query Frame = 1


Query: 29  MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 88
           MDG+DGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR
Sbjct: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60

Query: 89  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 148
           REEREL+RSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEG IVEFNNNDFDSAVG
Sbjct: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120

Query: 149 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 208
           MMETGTPLRVSLLRLLEET+GGCD  GGGNLGVAEKKR+ET NDSMCCVCMGRKKGAAFI
Sbjct: 121 MMETGTPLRVSLLRLLEETEGGCD--GGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFI 180

Query: 209 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 244
           PCGHTFCR+CSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 181 PCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 213

[Close]

BLAST of CSPI06G33180 vs. NCBI nr
Match: gi|1009181356|ref|XP_015872124.1| (PREDICTED: death-associated inhibitor of apoptosis 1-like [Ziziphus jujuba])

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 147/271 (54.24%), Postives = 171/271 (63.10%), Query Frame = 1


Query: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGG--GRRRPSLKQRLGFKVMGCCGATW 60
           MS LSVILQE+ RREREA TI GFL +QMD +DG   GRRR +LK+RLG K MGCCGA W
Sbjct: 1   MSQLSVILQESVRREREAGTILGFLREQMDDVDGERVGRRRITLKERLGLKGMGCCGAAW 60

Query: 61  GFRPPSVSVRDGGGEDDD------------------RRVPDLEVMNTRREERELNR--SC 120
           GFRP ++SVRD   +++D                  R+  + E +N  +   E N   SC
Sbjct: 61  GFRPTAISVRDNDDDNEDDEEQHQQQQQQQQQQRQRRQGQETETVNAGQAPTENNTDPSC 120

Query: 121 LSPLSVQSPGPSGMNLATALAAERRLRAS--PRGAEGDIVEFNNNDFDSAVGMMET-GTP 180
             P++  S    GMNLA ALAAER+ RA+    G        NN     +V      GTP
Sbjct: 121 TDPVNTGS----GMNLAAALAAERQFRATNETEGVSAGSTSNNNRSVSGSVAAETAPGTP 180

Query: 181 LRVSLLRLLEETDGGC---DDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGH 240
           LRVSL+RLLEETDGG     +G G  LG          NDS+CCVCMGRKKGAAFIPCGH
Sbjct: 181 LRVSLMRLLEETDGGDATEKEGVGTTLG----------NDSVCCVCMGRKKGAAFIPCGH 240

Query: 241 TFCRICSRELWLNRGSCPLCNRPIIEILDIF 244
           TFCR+CSRELWLNRGSCPLCNR I+EILDIF
Sbjct: 241 TFCRVCSRELWLNRGSCPLCNRSILEILDIF 257

[Close]

BLAST of CSPI06G33180 vs. NCBI nr
Match: gi|747096202|ref|XP_011096011.1| (PREDICTED: uncharacterized protein LOC105175305 isoform X1 [Sesamum indicum])

HSP 1 Score: 240.4 bits (612), Expect = 3.4e-60
Identity = 132/247 (53.44%), Postives = 161/247 (65.18%), Query Frame = 1


Query: 3   LLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRP 62
           +L + LQ     ER A T+   L ++MDG+ G   RRPSLK+RLG K +GCCGATWG  P
Sbjct: 7   ILGLRLQARVELERGATTLVELLAERMDGV-GRSLRRPSLKERLGLKGLGCCGATWGVGP 66

Query: 63  PSVSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAAER 122
            ++SVRDG  ED     P  EV+N  +E  E   +    + VQSP P+GMNLA ALAAER
Sbjct: 67  TTISVRDGDEEDGGPLSPPTEVINVAQEPIENAPAPPCVVVVQSPVPAGMNLAAALAAER 126

Query: 123 RLRASPRGAEGDIV---EFNNNDFDS---AVGMMETGTPLRVSLLRLLEETDGGCDDGGG 182
           +LRA      G  +     N+N   S   A  +   GTP RVSL+RLLEETDG       
Sbjct: 127 QLRAVVDSDNGGAILTPRPNSNGERSPTPAPAITAPGTPSRVSLMRLLEETDGY-----D 186

Query: 183 GNLGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPI 242
           G +   +++     +DS+CCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRGSCPLCNRPI
Sbjct: 187 GEMNKKQEEDHREGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPI 246

Query: 243 IEILDIF 244
           +EILDI+
Sbjct: 247 LEILDIY 247

The following BLAST results are available for this feature:

BLAST of CSPI06G33180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IAP4_OSHVF	5.7e-07	35.51	Putative apoptosis inhibitor ORF106 OS=Ostreid herpesvirus 1 (isolate France) GN...	[more]
LUL4_ARATH	1.7e-06	35.00	Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 S...	[more]

BLAST of CSPI06G33180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMY7_CUCSA	3.4e-139	99.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1	[more]
W9RJS4_9ROSA	9.0e-60	54.72	Uncharacterized protein OS=Morus notabilis GN=L484_014139 PE=4 SV=1	[more]
V4W9T1_9ROSI	1.2e-59	53.82	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1	[more]
I1KNH8_SOYBN	1.9e-57	53.09	Uncharacterized protein OS=Glycine max GN=GLYMA_07G264100 PE=4 SV=1	[more]
A0A067GSG4_CITSI	2.5e-57	53.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026976mg PE=4 SV=1	[more]

BLAST of CSPI06G33180 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03965.1	2.0e-50	46.67	RING/U-box superfamily protein	[more]
AT4G22250.1	5.6e-45	47.03	RING/U-box superfamily protein	[more]
AT1G62370.1	1.4e-32	37.80	RING/U-box superfamily protein	[more]
AT3G25030.1	9.3e-24	54.84	RING/U-box superfamily protein	[more]
AT4G13100.2	1.6e-23	50.93	RING/U-box superfamily protein	[more]

BLAST of CSPI06G33180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193867\|gb\|KGN49071.1\|	4.8e-139	99.59	hypothetical protein Csa_6G512860 [Cucumis sativus]	[more]
gi\|778720231\|ref\|XP_004134982.2\|	4.8e-123	99.53	PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus]	[more]
gi\|659079058\|ref\|XP_008440052.1\|	1.0e-117	95.81	PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo]	[more]
gi\|1009181356\|ref\|XP_015872124.1\|	1.3e-64	54.24	PREDICTED: death-associated inhibitor of apoptosis 1-like [Ziziphus jujuba]	[more]
gi\|747096202\|ref\|XP_011096011.1\|	3.4e-60	53.44	PREDICTED: uncharacterized protein LOC105175305 isoform X1 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G33180.1	CSPI06G33180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 195..232 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 195..233 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 183..237 score: 1.2
None	No IPR available	PANTHER	PTHR12183	UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN	coord: 145..243 score: 4.8E-30coord: 15..102 score: 4.8
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 192..238 score: 3.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 188..240 score: 4.48

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G33180	Cla014415	Watermelon (97103) v1	cpiwmB519
CSPI06G33180	Csa6G512860	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G33180	MELO3C007424	Melon (DHL92) v3.5.1	cpimeB512
CSPI06G33180	ClCG01G021600	Watermelon (Charleston Gray)	cpiwcgB453
CSPI06G33180	Lsi01G004640	Bottle gourd (USVL1VR-Ls)	cpilsiB439
CSPI06G33180	MELO3C007424.2	Melon (DHL92) v3.6.1	cpimedB496
CSPI06G33180	CsaV3_6G048640	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G33180	Cla97C01G021190	Watermelon (97103) v2	cpiwmbB433
CSPI06G33180	Bhi03G000481	Wax gourd	cpiwgoB634
CSPI06G33180	Cucsa.044890	Cucumber (Gy14) v1	cgycpiB028
CSPI06G33180	CmaCh07G003360	Cucurbita maxima (Rimu)	cmacpiB893
CSPI06G33180	CmaCh03G005610	Cucurbita maxima (Rimu)	cmacpiB689
CSPI06G33180	CmoCh03G005870	Cucurbita moschata (Rifu)	cmocpiB681
CSPI06G33180	CmoCh07G003250	Cucurbita moschata (Rifu)	cmocpiB873
CSPI06G33180	Cp4.1LG19g08010	Cucurbita pepo (Zucchini)	cpecpiB503
CSPI06G33180	Cp4.1LG10g09770	Cucurbita pepo (Zucchini)	cpecpiB080
CSPI06G33180	CsGy6G032750	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G33180	Carg13668	Silver-seed gourd	carcpiB0971
CSPI06G33180	Carg07864	Silver-seed gourd	carcpiB0672

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G33180	Cucumber (Chinese Long) v3	cpicucB318
CSPI06G33180	Watermelon (97103) v2	cpiwmbB436
CSPI06G33180	Cucurbita maxima (Rimu)	cmacpiB428
CSPI06G33180	Melon (DHL92) v3.5.1	cpimeB451
CSPI06G33180	Cucurbita pepo (Zucchini)	cpecpiB528
CSPI06G33180	Bottle gourd (USVL1VR-Ls)	cpilsiB447