Cla014415 (gene) Watermelon (97103) v1

Overview
NameCla014415
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRING/U-box domain-containing protein (AHRD V1 ***- Q5XV87_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
LocationChr1 : 30608204 .. 30608923 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTTCTCAGTATGATTTTACAGGAAGCCGCCAGGCGAGAAAGGGAGGCTAGGACCATTTGGGGATTTTTGACCGATCAAATGGACGGTGTCGATGGAGGAGGAAGGCGGCGGCCCAGTTTAAAGCAACGGCTAGGATTTAAGGTTATGGGCTGTTGTGGTGCTACTTGGGGTTTCCGGCCGCCGACTGTGAGCGTTAGAGAAGGCGGCGATGACGATGACCGGAGAGTACCGGATGTGGAGGTGATGAACACGCGCCGTTTTCCGGAGCTGGATCGGAGTTGCTTGAGTCCGTTGTCTGTTCAGTCGCCGGGGCCGTCCGGGATGAACTTAGCCACAGCACTGGCGGCGGAGCGTCGTTTAAGAGCGTCCCCACGTGGAGCAGAAGGGGGATTTTTGGAATCTGATAACAATGATTTTGATACACTGGGCGGAATGATGGGAACGGGAACGCCGTTGAGGGTGTCGTTGATGCGGCTGCTGGAAGAAACAGACGGTGGTGCTGGCGGTTGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCTGGAAATGATTCGATGTGTTGCGTGTGCATGGGAAGGAAAAAGGGAGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGGGAGCTGTGGTTAAACCGAGGATCTTGCCCGCTTTGCAACCGTCCGATTATTGAGATTCTTGATATATTTTGA

mRNA sequence

ATGAGTCTTCTCAGTATGATTTTACAGGAAGCCGCCAGGCGAGAAAGGGAGGCTAGGACCATTTGGGGATTTTTGACCGATCAAATGGACGGTGTCGATGGAGGAGGAAGGCGGCGGCCCAGTTTAAAGCAACGGCTAGGATTTAAGGTTATGGGCTGTTGTGGTGCTACTTGGGGTTTCCGGCCGCCGACTGTGAGCGTTAGAGAAGGCGGCGATGACGATGACCGGAGAGTACCGGATGTGGAGGTGATGAACACGCGCCGTTTTCCGGAGCTGGATCGGAGTTGCTTGAGTCCGTTGTCTGTTCAGTCGCCGGGGCCGTCCGGGATGAACTTAGCCACAGCACTGGCGGCGGAGCGTCGTTTAAGAGCGTCCCCACGTGGAGCAGAAGGGGGATTTTTGGAATCTGATAACAATGATTTTGATACACTGGGCGGAATGATGGGAACGGGAACGCCGTTGAGGGTGTCGTTGATGCGGCTGCTGGAAGAAACAGACGGTGGTGCTGGCGGTTGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCTGGAAATGATTCGATGTGTTGCGTGTGCATGGGAAGGAAAAAGGGAGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGGGAGCTGTGGTTAAACCGAGGATCTTGCCCGCTTTGCAACCGTCCGATTATTGAGATTCTTGATATATTTTGA

Coding sequence (CDS)

ATGAGTCTTCTCAGTATGATTTTACAGGAAGCCGCCAGGCGAGAAAGGGAGGCTAGGACCATTTGGGGATTTTTGACCGATCAAATGGACGGTGTCGATGGAGGAGGAAGGCGGCGGCCCAGTTTAAAGCAACGGCTAGGATTTAAGGTTATGGGCTGTTGTGGTGCTACTTGGGGTTTCCGGCCGCCGACTGTGAGCGTTAGAGAAGGCGGCGATGACGATGACCGGAGAGTACCGGATGTGGAGGTGATGAACACGCGCCGTTTTCCGGAGCTGGATCGGAGTTGCTTGAGTCCGTTGTCTGTTCAGTCGCCGGGGCCGTCCGGGATGAACTTAGCCACAGCACTGGCGGCGGAGCGTCGTTTAAGAGCGTCCCCACGTGGAGCAGAAGGGGGATTTTTGGAATCTGATAACAATGATTTTGATACACTGGGCGGAATGATGGGAACGGGAACGCCGTTGAGGGTGTCGTTGATGCGGCTGCTGGAAGAAACAGACGGTGGTGCTGGCGGTTGTGGGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCTGGAAATGATTCGATGTGTTGCGTGTGCATGGGAAGGAAAAAGGGAGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGGGAGCTGTGGTTAAACCGAGGATCTTGCCCGCTTTGCAACCGTCCGATTATTGAGATTCTTGATATATTTTGA

Protein sequence

MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPTVSVREGGDDDDRRVPDVEVMNTRRFPELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDGGAGGCGNLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF
Homology
[Close]
BLAST of Cla014415 vs. Swiss-Prot
Match: LUL4_ARATH (Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.5e-07
Identity = 23/57 (40.35%), Postives = 34/57 (59.65%), Query Frame = 1 

Query: 183 EEAGNDSMCCVCMGRKKGAAFIPCGHT-FCRVCSRELWLNRGSCPLCNRPIIEILDI 239
           +E+G+ + C +CM   K  A +PC H   C  C++EL L    CP+C +PI E+L+I
Sbjct: 294 DESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350

[Close]
BLAST of Cla014415 vs. TrEMBL
Match: A0A0A0KMY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 7.1e-118
Identity = 213/243 (87.65%), Postives = 226/243 (93.00%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MSLLS+ILQEAARREREARTIWGFLTDQMDG+DGGGRRRPSLKQRLGFKVMGCCGATWGF
Sbjct: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60

Query: 61  RPPTVSVRE-GGDDDDRRVPDVEVMNTRRFP-ELDRSCLSPLSVQSPGPSGMNLATALAA 120
           RPP+ SVR+ GG+DDDRRVPD+EVMNTRR   EL+RSCLSPLSVQSPGPSGMNLATALAA
Sbjct: 61  RPPSDSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120

Query: 121 ERRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDGGA--GGCGNLG 180
           ERRLRASPRGAEG  +E +NNDFD+  GMM TGTPLRVSL+RLLEETDGG   GG GNLG
Sbjct: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180

Query: 181 VAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEIL 240
           VAEKKR+E  NDSMCCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRGSCPLCNRPIIEIL
Sbjct: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240

[Close]
BLAST of Cla014415 vs. TrEMBL
Match: W9RJS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014139 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.4e-60
Identity = 143/251 (56.97%), Postives = 160/251 (63.75%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MS L +ILQE+ RREREARTI  FL +QMD  D    R+ SLK+RLG   MGCCGATWGF
Sbjct: 1   MSQLGVILQESVRREREARTILCFLREQMDVADEERGRKRSLKERLGLTGMGCCGATWGF 60

Query: 61  RPPTVSVREGGDDDDRRVPDVEVMNTRRFPELDRSCLSPLSVQS----PGPSGMNLATAL 120
           RP T+SV    DDD+     +E    +    LD +  +P  + S    PGPS MNLA AL
Sbjct: 61  RPTTISVL---DDDE-----IEEQQQQEEHHLDPTANNPGPICSDPDPPGPS-MNLAAAL 120

Query: 121 AAERRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDG--------G 180
           AAER+LR S     G     D        G    GTP+RVSLMRLLEETDG        G
Sbjct: 121 AAERQLRTSNDNERGN--TGDETTGSRTRGSTAPGTPMRVSLMRLLEETDGRDAMTERSG 180

Query: 181 AGGCGNLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLC 240
           AGG    GV          DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLC
Sbjct: 181 AGG----GVGSC-------DSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGACPLC 229

[Close]
BLAST of Cla014415 vs. TrEMBL
Match: V4W9T1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-58
Identity = 139/249 (55.82%), Postives = 164/249 (65.86%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRRRP---SLKQRLGFKVMGCCGAT 60
           MS L +ILQE+  RERE  TI   L ++MDGVD   R R    SLK+RLG K MGCCGAT
Sbjct: 1   MSQLRVILQESLDRERETITILALLREKMDGVDSIRRERGRGRSLKERLGLKSMGCCGAT 60

Query: 61  WGFRPPTVSVREG-GDDDDRRVPDVEVMNTRRFPELDRS----CLSPLSVQSPGPSGMNL 120
           WGFRP T+++ +  G++  +R  + E   +    + D      C+S + + S   SGMNL
Sbjct: 61  WGFRPNTINLSDSEGEEQQQRHLNQERSTSSAQNQPDNETVPVCMSRIPLIS---SGMNL 120

Query: 121 ATALAAERRLRASPRGAEGGFLESDNNDFDTLGGMMGT--GTPLRVSLMRLLEETDGGAG 180
           A ALAAER LR++  GA        NND +   G  GT  GTPLRVSLMRLL ET+G  G
Sbjct: 121 AAALAAERHLRSAD-GANPAGPTVINNDHNV--GPTGTKRGTPLRVSLMRLLAETEGCDG 180

Query: 181 GCGNLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNR 240
                       E+AGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRGSCPLCNR
Sbjct: 181 -----------EEKAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNR 232

[Close]
BLAST of Cla014415 vs. TrEMBL
Match: I1MFL5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G112600 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.7e-58
Identity = 136/242 (56.20%), Postives = 153/242 (63.22%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREAR-TIWGFLTDQMDGVDGGGRRRPSLKQRLGFKVMGCCGATWG 60
           MS L + LQE+ R +REAR TI G L +QMDGVDGG RRR SLK+R GF  MGCCGA+WG
Sbjct: 1   MSQLGVALQESLRTQREARSTILGLLREQMDGVDGGTRRRRSLKERFGFIGMGCCGASWG 60

Query: 61  FRPPTVSVREGGDDDDRRVPDVEVMNTRRFPELDRSCLSPLSVQSPGPSGMNLATALAAE 120
           FR   +SV +G  +  +      V      PE    C+ P        SGMNLA ALAAE
Sbjct: 61  FRSDALSVNQGEQEQQQETDPGRVAA----PE----CVGPAG----SGSGMNLAAALAAE 120

Query: 121 RRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDGGAGGCGNLGVAE 180
           R+LR      EGG                G   P RVSLMRLLEET+GG          E
Sbjct: 121 RQLRVPQE--EGG----------------GVRAPWRVSLMRLLEETEGGDAATAE---KE 180

Query: 181 KKREE--AGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILD 240
           K++EE   GNDS+CCVCMGRKKGAA IPCGHTFCRVCSRELWLNRGSCPLCNR I+EILD
Sbjct: 181 KEKEENVLGNDSVCCVCMGRKKGAALIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILD 209

[Close]
BLAST of Cla014415 vs. TrEMBL
Match: A0A0S3S3U7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G089000 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.4e-57
Identity = 130/241 (53.94%), Postives = 148/241 (61.41%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MS L ++LQE+   +RE RTI G L+DQMDGV+ G RRR S K+R GF  +GCCGATWGF
Sbjct: 1   MSQLGVVLQESL--QREPRTILGLLSDQMDGVESGARRRKSFKERFGFMGIGCCGATWGF 60

Query: 61  RPPTVSVREGGDDDDRRVPDVEVMNTRRFPELDRSCLSPLSVQSPGP--SGMNLATALAA 120
           R   +S  +G           E        E D    S L     G   SGMNLA ALAA
Sbjct: 61  RSDALSFTQG-----------EQQQQANHQETDPGQGSGLDCVDQGAAGSGMNLAAALAA 120

Query: 121 ERRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDGGAGGCGNLGVA 180
           ER++R  P+   G                   GTP RVSLMRLLEE++GG          
Sbjct: 121 ERQIRG-PQEEVG----------------RAPGTPWRVSLMRLLEESEGGESAAVEKEKE 180

Query: 181 EKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDI 240
           E+K +  GNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNR I+EILDI
Sbjct: 181 EEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDI 211

[Close]
BLAST of Cla014415 vs. NCBI nr
Match: gi|700193867|gb|KGN49071.1| (hypothetical protein Csa_6G512860 [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 1.0e-117
Identity = 213/243 (87.65%), Postives = 226/243 (93.00%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRRRPSLKQRLGFKVMGCCGATWGF 60
           MSLLS+ILQEAARREREARTIWGFLTDQMDG+DGGGRRRPSLKQRLGFKVMGCCGATWGF
Sbjct: 1   MSLLSVILQEAARREREARTIWGFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGF 60

Query: 61  RPPTVSVRE-GGDDDDRRVPDVEVMNTRRFP-ELDRSCLSPLSVQSPGPSGMNLATALAA 120
           RPP+ SVR+ GG+DDDRRVPD+EVMNTRR   EL+RSCLSPLSVQSPGPSGMNLATALAA
Sbjct: 61  RPPSDSVRDGGGEDDDRRVPDLEVMNTRREERELNRSCLSPLSVQSPGPSGMNLATALAA 120

Query: 121 ERRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDGGA--GGCGNLG 180
           ERRLRASPRGAEG  +E +NNDFD+  GMM TGTPLRVSL+RLLEETDGG   GG GNLG
Sbjct: 121 ERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLG 180

Query: 181 VAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEIL 240
           VAEKKR+E  NDSMCCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRGSCPLCNRPIIEIL
Sbjct: 181 VAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEIL 240

[Close]
BLAST of Cla014415 vs. NCBI nr
Match: gi|659079058|ref|XP_008440052.1| (PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 4.0e-106
Identity = 191/213 (89.67%), Postives = 200/213 (93.90%), Query Frame = 1 

Query: 29  MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPTVSVREGG-DDDDRRVPDVEVMNTR 88
           MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPP+VSVR+GG +DDDRRVPD+EVMNTR
Sbjct: 1   MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDDRRVPDLEVMNTR 60

Query: 89  RFP-ELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGFLESDNNDFDTLGG 148
           R   ELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGG +E +NNDFD+  G
Sbjct: 61  REERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFNNNDFDSAVG 120

Query: 149 MMGTGTPLRVSLMRLLEETDGGAGGCGNLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPC 208
           MM TGTPLRVSL+RLLEET+GG  G GNLGVAEKKREE GNDSMCCVCMGRKKGAAFIPC
Sbjct: 121 MMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGRKKGAAFIPC 180

Query: 209 GHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 240
           GHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 181 GHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 213

[Close]
BLAST of Cla014415 vs. NCBI nr
Match: gi|778720231|ref|XP_004134982.2| (PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 3.5e-102
Identity = 186/215 (86.51%), Postives = 198/215 (92.09%), Query Frame = 1 

Query: 29  MDGVDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPTVSVREGG-DDDDRRVPDVEVMNTR 88
           MDG+DGGGRRRPSLKQRLGFKVMGCCGATWGFRPP+ SVR+GG +DDDRRVPD+EVMNTR
Sbjct: 1   MDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDDRRVPDLEVMNTR 60

Query: 89  RFP-ELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGFLESDNNDFDTLGG 148
           R   EL+RSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEG  +E +NNDFD+  G
Sbjct: 61  REERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFNNNDFDSAVG 120

Query: 149 MMGTGTPLRVSLMRLLEETDGGA--GGCGNLGVAEKKREEAGNDSMCCVCMGRKKGAAFI 208
           MM TGTPLRVSL+RLLEETDGG   GG GNLGVAEKKR+E  NDSMCCVCMGRKKGAAFI
Sbjct: 121 MMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCMGRKKGAAFI 180

Query: 209 PCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 240
           PCGHTFCR+CSRELWLNRGSCPLCNRPIIEILDIF
Sbjct: 181 PCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 215

[Close]
BLAST of Cla014415 vs. NCBI nr
Match: gi|1009181356|ref|XP_015872124.1| (PREDICTED: death-associated inhibitor of apoptosis 1-like [Ziziphus jujuba])

HSP 1 Score: 257.3 bits (656), Expect = 2.6e-65
Identity = 148/267 (55.43%), Postives = 173/267 (64.79%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGG--GRRRPSLKQRLGFKVMGCCGATW 60
           MS LS+ILQE+ RREREA TI GFL +QMD VDG   GRRR +LK+RLG K MGCCGA W
Sbjct: 1   MSQLSVILQESVRREREAGTILGFLREQMDDVDGERVGRRRITLKERLGLKGMGCCGAAW 60

Query: 61  GFRPPTVSVREGGDDDD-------------------RRVPDVEVMNTRRFP---ELDRSC 120
           GFRP  +SVR+  DD++                   R+  + E +N  + P     D SC
Sbjct: 61  GFRPTAISVRDNDDDNEDDEEQHQQQQQQQQQQRQRRQGQETETVNAGQAPTENNTDPSC 120

Query: 121 LSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGFLESDNNDFDTLGGMMGT----GT 180
             P++  S    GMNLA ALAAER+ RA+    EG    S +N+  ++ G +      GT
Sbjct: 121 TDPVNTGS----GMNLAAALAAERQFRATNE-TEGVSAGSTSNNNRSVSGSVAAETAPGT 180

Query: 181 PLRVSLMRLLEETDGGAGGCGNLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCR 240
           PLRVSLMRLLEETDGG     +    E      GNDS+CCVCMGRKKGAAFIPCGHTFCR
Sbjct: 181 PLRVSLMRLLEETDGG-----DATEKEGVGTTLGNDSVCCVCMGRKKGAAFIPCGHTFCR 240

[Close]
BLAST of Cla014415 vs. NCBI nr
Match: gi|802778942|ref|XP_012091278.1| (PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas])

HSP 1 Score: 246.1 bits (627), Expect = 6.1e-62
Identity = 137/240 (57.08%), Postives = 164/240 (68.33%), Query Frame = 1 

Query: 1   MSLLSMILQEAARREREARTIWGFLTDQMDGVDGGGRR-RPSLKQRLGFKVMGCCGATWG 60
           MS LS+ILQE+ARRERE  TI G L  QMD VDG  R  R  LK+RLG + + CCGATWG
Sbjct: 1   MSQLSVILQESARREREVITIIGLLRQQMDTVDGRRRTTRMGLKERLGLRGLACCGATWG 60

Query: 61  FRPPTVSVREGGDDDDRRVPDVEVMNTRRFPELDRSCLSPLSVQSPGPSGMNLATALAAE 120
           FRP T+SVR+  D+++ R    EV+NT   P  + S   P  +  P  SGMNLA ALAAE
Sbjct: 61  FRPTTISVRD--DEEEPREQQTEVVNTGPTPSQEIS--DPDCLPIPASSGMNLAAALAAE 120

Query: 121 RRLRASPRGAEGGFLESDNNDFDTLGGMMGTGTPLRVSLMRLLEETDGGAGGCGNLGVAE 180
           R+ R      E   +   N + D+   M   GTPLRVSLMRLLEE++ G G    +G  E
Sbjct: 121 RQFR------EASSMNGSNGNADS---MTAPGTPLRVSLMRLLEESEVGDG---EIGGGE 180

Query: 181 KKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 240
           K+    G+D++CCVCM RKKGAAFIPCGHT+CRVCSRE+WLNRGSCPLCNR I+EILDIF
Sbjct: 181 KEGGGVGSDTVCCVCMVRKKGAAFIPCGHTYCRVCSREVWLNRGSCPLCNRLILEILDIF 224

The following BLAST results are available for this feature:
BLAST of Cla014415 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LUL4_ARATH9.5e-0740.35Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 S... [more]
BLAST of Cla014415 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMY7_CUCSA7.1e-11887.65Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1[more]
W9RJS4_9ROSA1.4e-6056.97Uncharacterized protein OS=Morus notabilis GN=L484_014139 PE=4 SV=1[more]
V4W9T1_9ROSI1.3e-5855.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1[more]
I1MFL5_SOYBN1.7e-5856.20Uncharacterized protein OS=Glycine max GN=GLYMA_15G112600 PE=4 SV=1[more]
A0A0S3S3U7_PHAAN2.4e-5753.94Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G089000 PE=... [more]
BLAST of Cla014415 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193867|gb|KGN49071.1|1.0e-11787.65hypothetical protein Csa_6G512860 [Cucumis sativus][more]
gi|659079058|ref|XP_008440052.1|4.0e-10689.67PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo][more]
gi|778720231|ref|XP_004134982.2|3.5e-10286.51PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus][more]
gi|1009181356|ref|XP_015872124.1|2.6e-6555.43PREDICTED: death-associated inhibitor of apoptosis 1-like [Ziziphus jujuba][more]
gi|802778942|ref|XP_012091278.1|6.1e-6257.08PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014415Cla014415.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 191..228
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 191..229
score: 10
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 179..233
score: 8.2
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 143..239
score: 2.1E-30coord: 15..104
score: 2.1
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 188..234
score: 1.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 182..236
score: 2.83