MELO3C006699 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006699
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBET1P/SFT1P-like protein 14A
Locationchr6 : 5157375 .. 5157864 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCACACAAATCCATGCCTCCTTCATCCTTCTTCATATCAACCAACTCCCAGCAAAATTAACAAAACCGTACCAAATAATTATAATGAATCCTGATAATAATCCCAATAACTCCAGATCATCAGCTTTTGATCCGGCCTCCACGACCGGCGGAATTCAACCGGCAGAGAAAAACCCAAACTCAAAAGCCGCCACGGCCTCCAATAATATGGGGAAGGCTTTGGCAGAGAGAGCAGTTTATGGAACCCAACAGCGGCGGACAGGAAGAAGAAGAAGAAACCTCATCCATGAACATGGTGCCATTCGGTTGCTTCCAAGTAGGCTTAGCAGAGTTTCTTTAGCTGATCATCATTATAATTCCCCACCCTCTGATTAATATTTTGTTCATTACATATATAATATAAAGTTCGTTAATTTATAATGTGTAATTCCTCACACTAGTTAATTAATTAATTAATCTTATAGTTTGAATATAGTATGCGTATTATGT

mRNA sequence

GATCACACAAATCCATGCCTCCTTCATCCTTCTTCATATCAACCAACTCCCAGCAAAATTAACAAAACCGTACCAAATAATTATAATGAATCCTGATAATAATCCCAATAACTCCAGATCATCAGCTTTTGATCCGGCCTCCACGACCGGCGGAATTCAACCGGCAGAGAAAAACCCAAACTCAAAAGCCGCCACGGCCTCCAATAATATGGGGAAGGCTTTGGCAGAGAGAGCAGTTTATGGAACCCAACAGCGGCGGACAGGAAGAAGAAGAAGAAACCTCATCCATGAACATGGTGCCATTCGGTTGCTTCCAAGTAGGCTTAGCAGAGTTTCTTTAGCTGATCATCATTATAATTCCCCACCCTCTGATTAATATTTTGTTCATTACATATATAATATAAAGTTCGTTAATTTATAATGTGTAATTCCTCACACTAGTTAATTAATTAATTAATCTTATAGTTTGAATATAGTATGCGTATTATGT

Coding sequence (CDS)

ATGAATCCTGATAATAATCCCAATAACTCCAGATCATCAGCTTTTGATCCGGCCTCCACGACCGGCGGAATTCAACCGGCAGAGAAAAACCCAAACTCAAAAGCCGCCACGGCCTCCAATAATATGGGGAAGGCTTTGGCAGAGAGAGCAGTTTATGGAACCCAACAGCGGCGGACAGGAAGAAGAAGAAGAAACCTCATCCATGAACATGGTGCCATTCGGTTGCTTCCAAGTAGGCTTAGCAGAGTTTCTTTAGCTGATCATCATTATAATTCCCCACCCTCTGATTAA

Protein sequence

MNPDNNPNNSRSSAFDPASTTGGIQPAEKNPNSKAATASNNMGKALAERAVYGTQQRRTGRRRRNLIHEHGAIRLLPSRLSRVSLADHHYNSPPSD*
Homology
[Close]
BLAST of MELO3C006699 vs. TrEMBL
Match: A0A0A0L5C0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165670 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-40
Identity = 89/106 (83.96%), Postives = 94/106 (88.68%), Query Frame = 1 

Query: 1   MNPDNNPNNSRSSAFDPASTTGGIQP---AEKNPNSKAATA-------SNNMGKALAERA 60
           MNPDNNPNNSRSSAFDPA+TTGGIQP   AEKNPNSKA+TA       SNN+GKALAERA
Sbjct: 1   MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERA 60

Query: 61  VYGTQQRRTGRRRRNLIHEHGAIRLLPSRLSRVSLADHHYNSPPSD 97
           VYG+QQRRTGRRRRNLIHEHGA RLLPSRLS+VSLADHHYNS PSD
Sbjct: 61  VYGSQQRRTGRRRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

[Close]
BLAST of MELO3C006699 vs. NCBI nr
Match: gi|700202017|gb|KGN57150.1| (hypothetical protein Csa_3G165670 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40
Identity = 89/106 (83.96%), Postives = 94/106 (88.68%), Query Frame = 1 

Query: 1   MNPDNNPNNSRSSAFDPASTTGGIQP---AEKNPNSKAATA-------SNNMGKALAERA 60
           MNPDNNPNNSRSSAFDPA+TTGGIQP   AEKNPNSKA+TA       SNN+GKALAERA
Sbjct: 1   MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERA 60

Query: 61  VYGTQQRRTGRRRRNLIHEHGAIRLLPSRLSRVSLADHHYNSPPSD 97
           VYG+QQRRTGRRRRNLIHEHGA RLLPSRLS+VSLADHHYNS PSD
Sbjct: 61  VYGSQQRRTGRRRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

The following BLAST results are available for this feature:
BLAST of MELO3C006699 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5C0_CUCSA1.1e-4083.96Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165670 PE=4 SV=1[more]
BLAST of MELO3C006699 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202017|gb|KGN57150.1|1.6e-4083.96hypothetical protein Csa_3G165670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54309melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006699T1MELO3C006699T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54309MU54309transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006699Csa3G165670Cucumber (Chinese Long) v2cumeB236
MELO3C006699Cla97C05G088000Watermelon (97103) v2mewmbB434
MELO3C006699Bhi01G000765Wax gourdmewgoB529
MELO3C006699CSPI03G14830Wild cucumber (PI 183967)cpimeB230
MELO3C006699CsGy3G014940Cucumber (Gy14) v2cgybmeB200
MELO3C006699CsaV3_3G015030Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006699Silver-seed gourdcarmeB0074
MELO3C006699Silver-seed gourdcarmeB0280
MELO3C006699Silver-seed gourdcarmeB0701
MELO3C006699Silver-seed gourdcarmeB0934
MELO3C006699Cucumber (Chinese Long) v3cucmeB509
MELO3C006699Watermelon (97103) v2mewmbB448
MELO3C006699Wax gourdmewgoB519
MELO3C006699Melon (DHL92) v3.5.1memeB051
MELO3C006699Melon (DHL92) v3.5.1memeB113
MELO3C006699Cucumber (Gy14) v1cgymeB070
MELO3C006699Cucumber (Gy14) v1cgymeB439
MELO3C006699Cucurbita maxima (Rimu)cmameB001
MELO3C006699Cucurbita maxima (Rimu)cmameB242
MELO3C006699Cucurbita maxima (Rimu)cmameB342
MELO3C006699Cucurbita maxima (Rimu)cmameB763
MELO3C006699Cucurbita maxima (Rimu)cmameB850
MELO3C006699Cucurbita moschata (Rifu)cmomeB230
MELO3C006699Cucurbita moschata (Rifu)cmomeB335
MELO3C006699Cucurbita moschata (Rifu)cmomeB832
MELO3C006699Cucurbita moschata (Rifu)cmomeB755
MELO3C006699Wild cucumber (PI 183967)cpimeB500
MELO3C006699Cucumber (Chinese Long) v2cumeB497
MELO3C006699Watermelon (Charleston Gray)mewcgB427
MELO3C006699Watermelon (Charleston Gray)mewcgB442
MELO3C006699Watermelon (97103) v1mewmB486
MELO3C006699Watermelon (97103) v1mewmB461
MELO3C006699Cucurbita pepo (Zucchini)cpemeB140
MELO3C006699Cucurbita pepo (Zucchini)cpemeB314
MELO3C006699Cucurbita pepo (Zucchini)cpemeB585
MELO3C006699Cucurbita pepo (Zucchini)cpemeB813
MELO3C006699Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006699Bottle gourd (USVL1VR-Ls)lsimeB369
MELO3C006699Cucumber (Gy14) v2cgybmeB438