MU54309 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU54309
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNo hit
Locationchr6 : 5157375 .. 5157865 (+)
Sequence length492
The following sequences are available for this feature:

transcribed_cluster sequence

GATCACACAAATCCATGCCTCCTTCATCCTTCTTCATATCAACCAACTCCCAGCAAAATTAACAAAACCGTACCAAATAATTATAATGAATCCTGATAATAATCCCAATAACTCCAGATCATCAGCTTTTGATCCGGCCTCCACGACCGGCGGAATTCAACCGGCAGAGAAAAACCCAAACTCAAAAGCCGCCACGGCCTCCAATAATATGGGGAAGGCTTTGGCAGAGAGAGCAGTTTATGGAACCCAACAGCGGCGGACAGGAAGAAGAAGAAGAAACCTCATCCATGAACATGGTGCCATTCGGTTGCTTCCAAGTAGGCTTAGCAGAGTTTCTTTAGCTGATCATCATTATAATTCCCCACCCTCTGATTAATATTTTGTTCATTACATATATAATATAAAGTTCGTTAATTTATAATGTGTAATTCCTCACACTAGTTAATTAATTAATTAATCTTATAGTTTGAATATAGTATGCGTATTATGTCG
BLAST of MU54309 vs. TrEMBL
Match: A0A0A0L5C0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165670 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-18
Identity = 58/97 (59.79%), Postives = 61/97 (62.89%), Query Frame = 2

Query: 113 SRSSAFDPASTTGGIQP---AEKNPNSKAAT-------ASNNMGKALAERAVYXXXXXXX 172
           SRSSAFDPA+TTGGIQP   AEKNPNSKA+T       ASNN+GKALAERAVY       
Sbjct: 10  SRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRT 69

Query: 173 XXXXXNLIHEHGAIXXXXXXXXXXXXADHHYNSPPSD 232
                NLIHEHGA             ADHHYNS PSD
Sbjct: 70  GRRRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

Query: 233 292
           
Sbjct: 130 106

Query: 293 352
           
Sbjct: 190 106

Query: 353 374
           
Sbjct: 250 106

BLAST of MU54309 vs. NCBI nr
Match: gi|700202017|gb|KGN57150.1| (hypothetical protein Csa_3G165670 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 58/97 (59.79%), Postives = 61/97 (62.89%), Query Frame = 2

Query: 113 SRSSAFDPASTTGGIQP---AEKNPNSKAATA-------SNNMGKALAERAVYXXXXXXX 172
           SRSSAFDPA+TTGGIQP   AEKNPNSKA+TA       SNN+GKALAERAVY       
Sbjct: 10  SRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRT 69

Query: 173 XXXXXNLIHEHGAIXXXXXXXXXXXXADHHYNSPPSD 232
                NLIHEHGA             ADHHYNS PSD
Sbjct: 70  GRRRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

Query: 233 292
           
Sbjct: 130 106

Query: 293 352
           
Sbjct: 190 106

Query: 353 374
           
Sbjct: 250 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L5C0_CUCSA1.2e-1859.79Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202017|gb|KGN57150.1|1.1e-1759.79hypothetical protein Csa_3G165670 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C006699MELO3C006699gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D07C0615D07C06EST
15D08C0615D08C06EST
PH15A7PH15A7EST
PH18G4PH18G4EST
PH9E3PH9E3EST