MELO3C006663 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006663
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTranslocator-like protein
Locationchr6 : 4897295 .. 4898015 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCTTCCAATCCCCCGTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTGCGTTCTCTCGCCGTCTCCGTCGCCATTCCCGTTTCCCTAACAATCGCCGTCATCTTCCTCTTTGGCCGCTCCTCTCGCCATTTCCCCAACCGTAACCGTCCGATTTGGATAGGCCCGCTCTGGCTCCTCCAACTTTCCTCCATTGGCTCCTCCTTCCTGGTCGGCCTCGCAGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCACCTTTCTCTCAGCGTCGTTTGGAGTCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCGTTTTTGTTCTGTGTTTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGGCGTTCGAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACGTATGTGTTCATTCATCTTTGATTGAGGTTTTTGATCATTTGGTGATTTTTGAAAAGATTTGTTTATCACATTGTTTTTGTAGTAGGACGTTGTAGAACTTTTTATCAGTAAAAAGAAATTGTTAGGAGATTGAAAGGAAAGGTTGTAGAAGTAGTGGTATATGATTTCGATTCATGAGTTATTGATCAAACATTAGGAGATTTTTATGATGAGTTTCTTGTTT

mRNA sequence

ATGCCTTCTTCCAATCCCCCGTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTGCGTTCTCTCGCCGTCTCCGTCGCCATTCCCGTTTCCCTAACAATCGCCGTCATCTTCCTCTTTGGCCGCTCCTCTCGCCATTTCCCCAACCGTAACCGTCCGATTTGGATAGGCCCGCTCTGGCTCCTCCAACTTTCCTCCATTGGCTCCTCCTTCCTGGTCGGCCTCGCAGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCACCTTTCTCTCAGCGTCGTTTGGAGTCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCGTTTTTGTTCTGTGTTTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGGCGTTCGAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACGTATGTGTTCATTCATCTTTGATTGAGGTTTTTGATCATTTGGTGATTTTTGAAAAGATTTGTTTATCACATTGTTTTTGTAGTAGGACGTTGTAGAACTTTTTATCAGTAAAAAGAAATTGTTAGGAGATTGAAAGGAAAGGTTGTAGAAGTAGTGGTATATGATTTCGATTCATGAGTTATTGATCAAACATTAGGAGATTTTTATGATGAGTTTCTTGTTT

Coding sequence (CDS)

ATGCCTTCTTCCAATCCCCCGTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTGCGTTCTCTCGCCGTCTCCGTCGCCATTCCCGTTTCCCTAACAATCGCCGTCATCTTCCTCTTTGGCCGCTCCTCTCGCCATTTCCCCAACCGTAACCGTCCGATTTGGATAGGCCCGCTCTGGCTCCTCCAACTTTCCTCCATTGGCTCCTCCTTCCTGGTCGGCCTCGCAGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCACCTTTCTCTCAGCGTCGTTTGGAGTCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCGTTTTTGTTCTGTGTTTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGGCGTTCGAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACGTATGTGTTCATTCATCTTTGA

Protein sequence

MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL*
Homology
[Close]
BLAST of MELO3C006663 vs. Swiss-Prot
Match: TSPO_ARATH (Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-32
Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 1 

Query: 9   KSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQL 68
           K + + K   AKR L+SL V+VA PV +T+   +  G S  +        WI PLWLL  
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCV 128
           + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW P+   + S V      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAV 166
                LF CY+AF  ++P A +L+KPCLAW A+++AV
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

[Close]
BLAST of MELO3C006663 vs. TrEMBL
Match: A0A0A0L583_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154290 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 8.6e-89
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 1 

Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIA IFLFGRSSRH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWL+QLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
           VIAFLFCVLD VTLFACY AF+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]
BLAST of MELO3C006663 vs. TrEMBL
Match: A0A061EW61_THECC (TSPO(Outer membrane tryptophan-rich sensory protein)-related, putative OS=Theobroma cacao GN=TCM_021206 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 93/171 (54.39%), Postives = 125/171 (73.10%), Query Frame = 1 

Query: 2   PSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIG 61
           P++ PP ++RPE K  +AKRAL SL  ++AIP+SLT+ VIF FG   R+    ++P W  
Sbjct: 5   PAAPPPVRARPEDKKARAKRALCSLLTAIAIPLSLTLFVIFKFGSGKRYRAMAHKPFWFP 64

Query: 62  PLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVV 121
           PLWL+ L+SIG+S L+ LAAWLVW D GFH  SNALPLY++ +SLS+VW PL LV+ +V 
Sbjct: 65  PLWLIHLASIGTSILMSLAAWLVWVDRGFHVNSNALPLYVSQISLSIVWDPLELVMGAVG 124

Query: 122 IAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
           + FLFC L F T+ ACY  F +VNPFA+DL+KPCL W+ +L+ V+Y  + L
Sbjct: 125 LGFLFCFLHFGTVIACYWTFRKVNPFARDLVKPCLVWSGFLTIVSYKLLTL 175

[Close]
BLAST of MELO3C006663 vs. TrEMBL
Match: W9RVG5_9ROSA (Translocator-like protein OS=Morus notabilis GN=L484_023527 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-49
Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 1 

Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           ++NP   ++ + K  KAKRAL +L ++V++P+SLT+ +I LFG S + + +  +P W  P
Sbjct: 26  TTNPTKMTKRQEKKAKAKRALWTLFIAVSVPLSLTMTIILLFG-SGKRYRSLTKPFWFPP 85

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LW + L+S+GSSFL G AAWL WADGGFH   +ALPLYIA +SLS+VW PLVLVI +  +
Sbjct: 86  LWFVHLASLGSSFLTGFAAWLFWADGGFHAHPDALPLYIAQISLSIVWDPLVLVIGAASL 145

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAV 166
             +FC++ F TLFACYR+F RVNPFAKDLMKPCLAW AYL+ V
Sbjct: 146 GLVFCLVHFGTLFACYRSFRRVNPFAKDLMKPCLAWVAYLTLV 187

[Close]
BLAST of MELO3C006663 vs. TrEMBL
Match: I1L102_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G044900 PE=4 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 6.2e-47
Identity = 87/160 (54.37%), Postives = 121/160 (75.62%), Query Frame = 1 

Query: 13  ESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQLSSIG 72
           ++K ++A+RALRSLA+ +A+P +LT+ +I LFG   ++    ++P W  PLW + LS +G
Sbjct: 8   DTKKSQARRALRSLAIGIAVPFTLTLTIIILFGSGRKYNQIISKPFWFAPLWFIHLSILG 67

Query: 73  SSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCVLDFV 132
           SSF +GLAAWLVWADGGF G ++A+ LYIAH+SLS+VW PLVLV+ +  +A + C+++FV
Sbjct: 68  SSFFMGLAAWLVWADGGFQGETDAMSLYIAHVSLSIVWHPLVLVMGAYWLALISCLVNFV 127

Query: 133 TLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
           TLF CY  F +VNPFAKDL KPCLAW AYL  V++  I +
Sbjct: 128 TLFLCYLRFRKVNPFAKDLAKPCLAWAAYLCLVSFKLIFI 167

[Close]
BLAST of MELO3C006663 vs. TrEMBL
Match: V4RYC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007035mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 88/170 (51.76%), Postives = 126/170 (74.12%), Query Frame = 1 

Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           +++P    +PE+K   AKRA RSLA S+++P+S+T+A+I +FG S +++    +P+W  P
Sbjct: 12  NNSPTTSHKPETKMISAKRAFRSLAFSISVPLSVTLAIICIFG-SGKNYRALPKPLWFPP 71

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LW + L+++ SSF + LAAWLVWADGGFH  S++L LY+A +SLSV+W PLVLV  +  +
Sbjct: 72  LWFIHLATLSSSFFMSLAAWLVWADGGFHARSDSLLLYVAQVSLSVLWDPLVLVTGAAWL 131

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
             +FCV  F TL ACY++FE+VNPFAKDL+KPCLAW  +L+ V Y  I+L
Sbjct: 132 GLVFCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKLIYL 180

[Close]
BLAST of MELO3C006663 vs. TAIR10
Match: AT2G47770.1 (AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related)

HSP 1 Score: 140.6 bits (353), Expect = 9.2e-34
Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 1 

Query: 9   KSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQL 68
           K + + K   AKR L+SL V+VA PV +T+   +  G S  +        WI PLWLL  
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCV 128
           + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW P+   + S V      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAV 166
                LF CY+AF  ++P A +L+KPCLAW A+++AV
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

[Close]
BLAST of MELO3C006663 vs. NCBI nr
Match: gi|449433405|ref|XP_004134488.1| (PREDICTED: translocator protein homolog [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 1 

Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIA IFLFGRSSRH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120
           GPLWL+QLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
           VIAFLFCVLD VTLFACY AF+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]
BLAST of MELO3C006663 vs. NCBI nr
Match: gi|590661109|ref|XP_007035583.1| (TSPO(outer membrane tryptophan-rich sensory protein)-related, putative [Theobroma cacao])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 93/171 (54.39%), Postives = 125/171 (73.10%), Query Frame = 1 

Query: 2   PSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIG 61
           P++ PP ++RPE K  +AKRAL SL  ++AIP+SLT+ VIF FG   R+    ++P W  
Sbjct: 5   PAAPPPVRARPEDKKARAKRALCSLLTAIAIPLSLTLFVIFKFGSGKRYRAMAHKPFWFP 64

Query: 62  PLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVV 121
           PLWL+ L+SIG+S L+ LAAWLVW D GFH  SNALPLY++ +SLS+VW PL LV+ +V 
Sbjct: 65  PLWLIHLASIGTSILMSLAAWLVWVDRGFHVNSNALPLYVSQISLSIVWDPLELVMGAVG 124

Query: 122 IAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
           + FLFC L F T+ ACY  F +VNPFA+DL+KPCL W+ +L+ V+Y  + L
Sbjct: 125 LGFLFCFLHFGTVIACYWTFRKVNPFARDLVKPCLVWSGFLTIVSYKLLTL 175

[Close]
BLAST of MELO3C006663 vs. NCBI nr
Match: gi|703105572|ref|XP_010098281.1| (Translocator-like protein [Morus notabilis])

HSP 1 Score: 202.2 bits (513), Expect = 7.3e-49
Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 1 

Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           ++NP   ++ + K  KAKRAL +L ++V++P+SLT+ +I LFG S + + +  +P W  P
Sbjct: 26  TTNPTKMTKRQEKKAKAKRALWTLFIAVSVPLSLTMTIILLFG-SGKRYRSLTKPFWFPP 85

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LW + L+S+GSSFL G AAWL WADGGFH   +ALPLYIA +SLS+VW PLVLVI +  +
Sbjct: 86  LWFVHLASLGSSFLTGFAAWLFWADGGFHAHPDALPLYIAQISLSIVWDPLVLVIGAASL 145

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAV 166
             +FC++ F TLFACYR+F RVNPFAKDLMKPCLAW AYL+ V
Sbjct: 146 GLVFCLVHFGTLFACYRSFRRVNPFAKDLMKPCLAWVAYLTLV 187

[Close]
BLAST of MELO3C006663 vs. NCBI nr
Match: gi|356532573|ref|XP_003534846.1| (PREDICTED: translocator protein homolog [Glycine max])

HSP 1 Score: 195.3 bits (495), Expect = 8.9e-47
Identity = 87/160 (54.37%), Postives = 121/160 (75.62%), Query Frame = 1 

Query: 13  ESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGPLWLLQLSSIG 72
           ++K ++A+RALRSLA+ +A+P +LT+ +I LFG   ++    ++P W  PLW + LS +G
Sbjct: 8   DTKKSQARRALRSLAIGIAVPFTLTLTIIILFGSGRKYNQIISKPFWFAPLWFIHLSILG 67

Query: 73  SSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVIAFLFCVLDFV 132
           SSF +GLAAWLVWADGGF G ++A+ LYIAH+SLS+VW PLVLV+ +  +A + C+++FV
Sbjct: 68  SSFFMGLAAWLVWADGGFQGETDAMSLYIAHVSLSIVWHPLVLVMGAYWLALISCLVNFV 127

Query: 133 TLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
           TLF CY  F +VNPFAKDL KPCLAW AYL  V++  I +
Sbjct: 128 TLFLCYLRFRKVNPFAKDLAKPCLAWAAYLCLVSFKLIFI 167

[Close]
BLAST of MELO3C006663 vs. NCBI nr
Match: gi|641852783|gb|KDO71642.1| (hypothetical protein CISIN_1g042873mg [Citrus sinensis])

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-46
Identity = 88/170 (51.76%), Postives = 125/170 (73.53%), Query Frame = 1 

Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62
           +++P    +PE+K   AKRA RSLA S+++P+S+T+A+I +FG S +++    +P W  P
Sbjct: 12  NNSPTTSHKPETKMISAKRAFRSLAFSISVPLSVTLAIICIFG-SGKNYRALPKPFWFPP 71

Query: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122
           LW + L+++ SSF + LAAWLVWADGGFH  S++L LY+A +SLSV+W PLVLV  +  +
Sbjct: 72  LWFIHLATLSSSFFMSLAAWLVWADGGFHARSDSLLLYVAQVSLSVLWDPLVLVTGAACL 131

Query: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 173
             +FCV  F TL ACY++FE+VNPFAKDL+KPCLAW  +L+ V Y  I+L
Sbjct: 132 GLVFCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKLIYL 180

The following BLAST results are available for this feature:
BLAST of MELO3C006663 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TSPO_ARATH1.6e-3243.95Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1[more]
BLAST of MELO3C006663 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L583_CUCSA8.6e-8995.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154290 PE=4 SV=1[more]
A0A061EW61_THECC1.7e-4954.39TSPO(Outer membrane tryptophan-rich sensory protein)-related, putative OS=Theobr... [more]
W9RVG5_9ROSA5.1e-4957.06Translocator-like protein OS=Morus notabilis GN=L484_023527 PE=4 SV=1[more]
I1L102_SOYBN6.2e-4754.38Uncharacterized protein OS=Glycine max GN=GLYMA_09G044900 PE=4 SV=2[more]
V4RYC8_9ROSI1.4e-4651.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007035mg PE=4 SV=1[more]
BLAST of MELO3C006663 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47770.19.2e-3443.95 TSPO(outer membrane tryptophan-rich sensory protein)-related[more]
BLAST of MELO3C006663 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433405|ref|XP_004134488.1|1.2e-8895.35PREDICTED: translocator protein homolog [Cucumis sativus][more]
gi|590661109|ref|XP_007035583.1|2.5e-4954.39TSPO(outer membrane tryptophan-rich sensory protein)-related, putative [Theobrom... [more]
gi|703105572|ref|XP_010098281.1|7.3e-4957.06Translocator-like protein [Morus notabilis][more]
gi|356532573|ref|XP_003534846.1|8.9e-4754.38PREDICTED: translocator protein homolog [Glycine max][more]
gi|641852783|gb|KDO71642.1|2.0e-4651.76hypothetical protein CISIN_1g042873mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004307TspO_MBR
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005525 GTP binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006663T1MELO3C006663T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004307TspO/MBR-related proteinPIRPIRSF005859PBRcoord: 15..172
score: 1.1
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 7..167
score: 8.7
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 29..168
score: 1.2
NoneNo IPR availablePANTHERPTHR10057:SF6SUBFAMILY NOT NAMEDcoord: 7..167
score: 8.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006663Csa3G154290Cucumber (Chinese Long) v2cumeB236
MELO3C006663Cla021740Watermelon (97103) v1mewmB461
MELO3C006663Cla97C05G087600Watermelon (97103) v2mewmbB434
MELO3C006663Bhi01G000717Wax gourdmewgoB529
MELO3C006663CSPI03G14400Wild cucumber (PI 183967)cpimeB230
MELO3C006663Cucsa.253100Cucumber (Gy14) v1cgymeB439
MELO3C006663CmaCh06G014990Cucurbita maxima (Rimu)cmameB763
MELO3C006663CmoCh06G014950Cucurbita moschata (Rifu)cmomeB755
MELO3C006663Lsi05G015390Bottle gourd (USVL1VR-Ls)lsimeB369
MELO3C006663Cp4.1LG12g05440Cucurbita pepo (Zucchini)cpemeB144
MELO3C006663Cp4.1LG08g04900Cucurbita pepo (Zucchini)cpemeB813
MELO3C006663CsGy3G014540Cucumber (Gy14) v2cgybmeB200
MELO3C006663Carg17343Silver-seed gourdcarmeB0610
MELO3C006663CsaV3_3G014620Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006663Wild cucumber (PI 183967)cpimeB080
MELO3C006663Watermelon (Charleston Gray)mewcgB427
MELO3C006663Watermelon (Charleston Gray)mewcgB442
MELO3C006663Watermelon (97103) v1mewmB486
MELO3C006663Cucurbita pepo (Zucchini)cpemeB140
MELO3C006663Cucurbita pepo (Zucchini)cpemeB314
MELO3C006663Cucurbita pepo (Zucchini)cpemeB585
MELO3C006663Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006663Cucumber (Gy14) v2cgybmeB070
MELO3C006663Silver-seed gourdcarmeB0074
MELO3C006663Silver-seed gourdcarmeB0701
MELO3C006663Silver-seed gourdcarmeB0828
MELO3C006663Watermelon (97103) v2mewmbB448
MELO3C006663Wax gourdmewgoB521
MELO3C006663Melon (DHL92) v3.5.1memeB051
MELO3C006663Melon (DHL92) v3.5.1memeB113
MELO3C006663Cucurbita maxima (Rimu)cmameB006
MELO3C006663Cucurbita maxima (Rimu)cmameB242
MELO3C006663Cucurbita maxima (Rimu)cmameB342
MELO3C006663Cucurbita maxima (Rimu)cmameB850
MELO3C006663Cucurbita moschata (Rifu)cmomeB230
MELO3C006663Cucurbita moschata (Rifu)cmomeB335
MELO3C006663Cucurbita moschata (Rifu)cmomeB832