MELO3C006125 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCCTGACATTTAAACAAATTAACCCGCAAAGCTCGCAAGAACTGATCGCGGGTCATCACCAAGGTTTCTTCTTCTTTACTTCTTCCCGGCCTTGCTCGGCAGGTGCAGAGTGAACACAGCCATGGTGACGTCGCCGGTGGTGAACACGTATCCACTTTCCAGCTATACCTTCGGTACCAAAGAGCCGAAGCTCGAGAAGGACACCTCTGTCGCTGATCGTCTTGCTCGCATGAAAGTCAAGTACTGCCAATTTTCTCGATTCCTTAAACCCTAATTTTTGTTGCTTTTTAACGTCTTAGGGATTTATTGTTCTTGAAAGTTAGGAACTCTGGCCGTTTCCTGTTGTGGATTCGTGGTCATTTTACGTTTGATGTGTATACCACTACATTGAATCGTGGGAAATGATGTATGTTTATGATTATACTAGGCCATTTGTTGGGAGATTTGATCTTAGAGTTTTATAAAATAACATGACACGAAGTATAGAACTGAGTTTGTAGCGTGTTTCTGATTTCAGGAAAACGACTGAGCCTGGTATGGAGGGCTTTTTTCCTTGGGGGGGGGGGGTAATAATGTCGTGAATTAAATTCTTCGAAACACAGTTTTGGATTAAAGTGTATTATGTATATCATATTCAAGCCGGTGCTTCATTGGCGAATTTAATGCATTCTTCTTGTTGTTTTTTATTTTTATTTTTTATATTCCATTTATTGGCTTTGGAGGAAGTTGAATGATTAACATGTACTGGTGTTTGGTTCACAGCTATATGAAGGAAGGCATGAGAACAAGTGTTGAAGCAATTCTGCTGGTTAGTATGTACCTTCTTCACGTTTCATCTTAATGTACTCAGGGCCGTGCTTTGTTATTTCTTTCTTTCTTTCTTTTTTTAAATAGCACTTAAATAGATCATTAGAACGTAGGGTTACTAGCTGGATGTCAGGGTATATGTCTCTTTTTCTTATAAAAAAAATGAATACACTTTAACATGCTGAAGTTCTGTTTCTTATATAAAAGAAACATGTTGAATCCTTTATTCTCCTATTTTTTCTTTACCTGAGTGGTACACATTGAATAGAAAGTCAAGGATTACTAGAAGTCTAAATTGCAACATTGATCATTGTCATCTTTACCAAAAGTAAGCATCCGATGAAATATTTGTATATTTTAACATGGGATCTCCCCGCTTCTATTTGCTTCCTACTGGAAAATTTTGACGCTTAGGGATGCCTCATTCTCTCTAAAGCTGGTAGGGTGGCCCTTGCCCGACCCAATCCCTCCCCAATAGCTTCCCTTGATATCACTTTTCTTTCCTAAGAGCTCCCAAGAACATTACAATTTCTATGGAAATATTTAACAAAGATCGTGTGGGATGGTGGTGTAATGGTAGTTACGAGTATAATAGTAACTTAGTTATATGAGCTTGGACAACACCCCCAATCGCCCTTGGGGTTTGGGGGTGGGCTCCCTTGAACATTGAAATACCTCTCTTCTCACCAAATGGATTTGGAGATTTACTCAAGACAAGAGTTCGTTCTGGCACAAGGTTATTTCTAGCATTTTTGTGTCAAACTCATGGGTTGGATGGTTGCTGACTTAAGAAACGAAAAAAAGAAACAAGCCTTGAATGGATATTTTAGGAATTTCCCCTTCTTTGCTTGTTTTTCCAAATTCAAGGCAAGTTATGGTAGGAACATTCGCCTTTGGCATGATATTTGGGTCAATCAAGATCCTCTGAAAGACTACTTTTCTGACATGCACGCTGTATCTTTTAAAAAGGAGCCCAATGTCTTTGATTCTTGGCACGACAATTACCAGGTGTGTGGCTATGGCCTTAAATAGGGCTTTTAGATTGTGAGATGTATAGTTTATCATTATTATTATTTTTCTATTTTTATATCTACGAGTGTTTGGGCCAGCTCATGCACATGTCAATTATTCTCAAATCATAGATAGGTGGTTCCACACCCTGGTTGTACTAATATCTACACACACTAAAAAAATTATAGGTAGGTGGCCAACATGAAATAAACTTGTGATCCCTTAGCCCTTCAGCTCTTTTATGTTCCTTCATCTACCACTCGATCAACCCATGATGGTTGATTGTGAGATGGATAGTTGTGTTGGCCTTGTGGCAAACCTTAACTCCATTTAGCTAGGAGAGGGTGTGGATTAATTCTTTGGTACCTTGAAGGCTTTGGTATATACTCTAGTAATTCGACCTTTCAAAACCTTGCTACTAAGTGTCCTAGGGCCAATACAACTCTAACAAGCAGAATTTGGAAGCCTAAATCCCTGAAAAAGATCAAAATCCTTGGTTTTTAGAAGTCTAAATATTGACGACAAGCTTCAAAGAAAATTTAGAAGGCTGTCTCCTATGCCTTTGAGTTGTAGGATGTGCTTGCATATGGTGGAAAACCCGGATCAACTTTTCCTCAATTGTTTAACTTTGTCTCAAGATGGTGGAGTTACTTGGTTGGGATTTAGGTGTCTTCTTGTTTCCCTAAGGAAGTGGATGATTGGCTTATGGAAGGTATTCACACGTGTAACTTGAAAGGAAAAGCCAAGTTTTTCGGAGGTGGCCACTAGGGGGAAAGCATCAATCATTTCAATTGGCATCAGTTTTGGCCTCAATCAGTTTTGTTCGAATTAATGAGAACTGTACTGTGCTAAGTGGAATGCTGGATATGATTACAGCCTACAACCAGGTTTTTCTAGTCGTTAACATAATAAGAAACGCCATCAAGATTAATCAATTGTAATATGCTGATGATATCTCTATTTAATGTGCCTACTATAATGCTGATGTTGAAGAATCTGAGTAAGGTGCTGTACCATTTGAAGCCAGCATTAATCTGGACTGTTTGCTGTTATCTCAGTCGTGCTTCAGTCCCTTGTTGCCAAGCTGGAGATTGACTAGGACTTCGATTCCTTGTGATGTAGAAATATGGATTCAATCAGGGAGGTGAAATGCAACTAGGAGAGATAATACAATCAATTGGAAATGGAGGGTCTCTAGAAGCTCGATTTTAAAAGAAATCTGTTGAATGCTGAAATACAGGGGGCAAGTGGCCTGTGGCTGGCAGGCAGCTTGACCTTTCAAATTTTGATAAGAAAGAAACATGTTGATGAATCAAAAGGAGCCCAGAAACAGGAGGGTGAGCAGTCCAATCCCAAAGCTAAAGCAGTTTGCAGAATAGGACATCAATTATACAAGCCACACTATGATTACAACAAACATCGCTCTTAGGGTATATTGCAGGGGATTAACATGCAGGATGCTACCCCACTTTGCACCCCTTAGACTTATTTTTTAAGATACAATAGTTTCTCCAGCCTATAATTTCAAAACCGTGGTTTCAATAGAATTAGACAAGAGATTTCTAGCTTTCTGCCTTTTTTTTTTTTTGAGTTGGGCACTGAATGTTTCTTAGTCATAAACATTCTCCTTGGTGCAATTTAGTAACTGATATTCAACAGTGGCATCACTTTATCTTTTCTTATTTTCCCCTTTCTATTCCACAGGTGCAAGAACATAAACATCCCCACATTCTACTATTGCAAATAGGCAATACCTTTTGCAAGCTCCCTGGAGGACGGTTGAAGCCAGGAGAAAATGGTAACATTTTGTGTACAATTGAAGCCCCGGACATTCCATTGAGTAAAATCTCTCTCTCATGTTTATTTTAACATCTGCAGAAATTGAAGGTTTAAAGAGGAAGCTCACAAGCAAACTGGGTGCAAACTCGCCCTCACTCCAGCCTGATTGGCAGGTTCAAATCATTTCTTCTATTTTTATGTTCAAATCTAACTAATGAAACTATATATGTTCCTACGAGGAATTAGCTTCTTCATTTTTAATTTCCTGCAGATTGGTGAATGTGTGGCGATTTGGTGGAGACCAAACTTTGAAACTGTCATGTATCCTTATTGCCCCCCTCATATTACGAAACCCAAGGTATGTGGACACCCTCCCACTACAGTTTTTTTTTGGGTGGTAACTTTGATCAAAGTTTAAATGATAGATATTTCTGGAAAACTTATAATAAAGAAAAGTTACTTAAATTAATAAACTAAACATTTTACACTTCTCAAATAAATTAGAAAGGTTTATTGTTTATATTATGTAATGCACATCAACATTTTGTTACTTTAAATATGTTTCATCAATTTTTTTATTGCTATAGTGGAAATGTTGTTTTGCCCCCTATGTATTGAGCTCTCGATCATGTGTATGGAAATTTAACACACTGACTTTGATAGGGAAGAATATAGGTATCATATATATATATTAATACGTATCTTTCTTTTTTAAATGGATTCTGCTTGTTGCTTTTTTCGACCTTCATTGTGTGAGGATTGTAGAAAATTCCCATAGTTCATTATACAAGCTGATCTACGGCCTCCCTATTCTCCCGTTCCTTCCATCTTATTTCAATTAGGATTGTTCAGAGAGCACCAATCCTATTAAAAATAAGCTTTTTATCTTTTCTTTATACTTGACTCTTACCGAATACTTTCTTTTTCCATTTCCATACGGAAAAAGATAAAATCTTAATCAAGGTTTTGGATGATCCAGGAATGCAAAAAACTTTTCATTGTTCACTTGTCTGAAAGAGAGTACTTCGCCGTTCCCAAAAATTTGAAGCTGCTTGCAGTTCCCTTGTTTGAGCTCTATGACAATGTGCAGGTATGTTACATTTTTTCTTAGTATAAACAAATTTAGTGCCTATTGATTAATTTTATCGTATTGGACAATGTGGAAAACCTGTTGATCTATAAGCAATTAGTGTGTGGTGAGTATGTGGTCTGGTTGATATCAAGGGAAAAATAAATTATAGATTGATTTTCTGGATGCTCGATGAAAATGATAGTTCCTGTGAATCCCATTAGCCTTTTGTCATGCTATCTATAAGCTAAATAATAGTTTTTGGTTTTTTGCACTTGATCACAGAGATATGGACCAGTTATCTCGACGATACCGCAGCAGCTTTCCAGGTTTCAGTTCAACATGATCACCACATGAGGTTACAGTACAAGAGCCCCTTAAATTTGTAGCAGGAATTGACTTCGATTTGCTTGAGATAGTTAGAAAAGAAACTTAGAGGACATTATCAACCTTGCTTGAGATAGATTAGCATACTTGTGATAGACTTTCTTGTTCTTGACCTTTTTGTCGATGTGTTTGCGAGGCAAAATTATGTTGCTTGTAACAAGATTCAACTGAGTTTGTGTATCATTTTAGCACAATTAAAGTTTTAGAAGTGTAATGTATGTCTATCGAATCAATTCTTAAAAGCCAAAAGCAAGATTGCTAAATGGTTATTGGCATGATCTTCTTGAGATGTAGGAGGTTCGAACCCGCGTCCCCAGACGTTTTGGTTTCCAGCTTCCGAGACGATGATAGTATTAGCTCTTTGTATCTCTAGTTTAATGCTATTTCAGTCATTCTTGTGGGATAAC ATCGCCTGACATTTAAACAAATTAACCCGCAAAGCTCGCAAGAACTGATCGCGGGTCATCACCAAGGTTTCTTCTTCTTTACTTCTTCCCGGCCTTGCTCGGCAGGTGCAGAGTGAACACAGCCATGGTGACGTCGCCGGTGGTGAACACGTATCCACTTTCCAGCTATACCTTCGGTACCAAAGAGCCGAAGCTCGAGAAGGACACCTCTGTCGCTGATCGTCTTGCTCGCATGAAAGTCAACTATATGAAGGAAGGCATGAGAACAAGTGTTGAAGCAATTCTGCTGGTGCAAGAACATAAACATCCCCACATTCTACTATTGCAAATAGGCAATACCTTTTGCAAGCTCCCTGGAGGACGGTTGAAGCCAGGAGAAAATGAAATTGAAGGTTTAAAGAGGAAGCTCACAAGCAAACTGGGTGCAAACTCGCCCTCACTCCAGCCTGATTGGCAGATTGGTGAATGTGTGGCGATTTGGTGGAGACCAAACTTTGAAACTGTCATGTATCCTTATTGCCCCCCTCATATTACGAAACCCAAGGAATGCAAAAAACTTTTCATTGTTCACTTGTCTGAAAGAGAGTACTTCGCCGTTCCCAAAAATTTGAAGCTGCTTGCAGTTCCCTTGTTTGAGCTCTATGACAATGTGCAGAGATATGGACCAGTTATCTCGACGATACCGCAGCAGCTTTCCAGGTTTCAGTTCAACATGATCACCACATGAGGTTACAGTACAAGAGCCCCTTAAATTTGTAGCAGGAATTGACTTCGATTTGCTTGAGATAGTTAGAAAAGAAACTTAGAGGACATTATCAACCTTGCTTGAGATAGATTAGCATACTTGTGATAGACTTTCTTGTTCTTGACCTTTTTGTCGATGTGTTTGCGAGGCAAAATTATGTTGCTTGTAACAAGATTCAACTGAGTTTGTGTATCATTTTAGCACAATTAAAGTTTTAGAAGTGTAATGTATGTCTATCGAATCAATTCTTAAAAGCCAAAAGCAAGATTGCTAAATGGTTATTGGCATGATCTTCTTGAGATGTAGGAGGTTCGAACCCGCGTCCCCAGACGTTTTGGTTTCCAGCTTCCGAGACGATGATAGTATTAGCTCTTTGTATCTCTAGTTTAATGCTATTTCAGTCATTCTTGTGGGATAAC ATGGTGACGTCGCCGGTGGTGAACACGTATCCACTTTCCAGCTATACCTTCGGTACCAAAGAGCCGAAGCTCGAGAAGGACACCTCTGTCGCTGATCGTCTTGCTCGCATGAAAGTCAACTATATGAAGGAAGGCATGAGAACAAGTGTTGAAGCAATTCTGCTGGTGCAAGAACATAAACATCCCCACATTCTACTATTGCAAATAGGCAATACCTTTTGCAAGCTCCCTGGAGGACGGTTGAAGCCAGGAGAAAATGAAATTGAAGGTTTAAAGAGGAAGCTCACAAGCAAACTGGGTGCAAACTCGCCCTCACTCCAGCCTGATTGGCAGATTGGTGAATGTGTGGCGATTTGGTGGAGACCAAACTTTGAAACTGTCATGTATCCTTATTGCCCCCCTCATATTACGAAACCCAAGGAATGCAAAAAACTTTTCATTGTTCACTTGTCTGAAAGAGAGTACTTCGCCGTTCCCAAAAATTTGAAGCTGCTTGCAGTTCCCTTGTTTGAGCTCTATGACAATGTGCAGAGATATGGACCAGTTATCTCGACGATACCGCAGCAGCTTTCCAGGTTTCAGTTCAACATGATCACCACATGA MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT*
BLAST of MELO3C006125 vs. Swiss-Prot
Match: CFIS2_ARATH (Pre-mRNA cleavage factor Im 25 kDa subunit 2 OS=Arabidopsis thaliana GN=CFIS2 PE=1 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 5.2e-70 Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 1
BLAST of MELO3C006125 vs. Swiss-Prot
Match: CPSF5_BOVIN (Cleavage and polyadenylation specificity factor subunit 5 OS=Bos taurus GN=NUDT21 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.3e-43 Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 1
BLAST of MELO3C006125 vs. Swiss-Prot
Match: CPSF5_HUMAN (Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens GN=NUDT21 PE=1 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.3e-43 Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 1
BLAST of MELO3C006125 vs. Swiss-Prot
Match: CPSF5_MOUSE (Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus GN=Nudt21 PE=1 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.3e-43 Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 1
BLAST of MELO3C006125 vs. Swiss-Prot
Match: CPSF5_PONAB (Cleavage and polyadenylation specificity factor subunit 5 OS=Pongo abelii GN=NUDT21 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.3e-43 Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 1
BLAST of MELO3C006125 vs. TrEMBL
Match: A0A0A0L8Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122550 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.1e-77 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of MELO3C006125 vs. TrEMBL
Match: A0A061G0V3_THECC (Cleavage/polyadenylation specificity factor, 25kDa subunit OS=Theobroma cacao GN=TCM_015155 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 3.7e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of MELO3C006125 vs. TrEMBL
Match: V4U7E9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005929mg PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 3.7e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of MELO3C006125 vs. TrEMBL
Match: A0A067F1N4_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039176mg PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 3.7e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of MELO3C006125 vs. TrEMBL
Match: A0A0D2PAK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G119000 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 1.9e-74 Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1
BLAST of MELO3C006125 vs. TAIR10
Match: AT4G25550.1 (AT4G25550.1 Cleavage/polyadenylation specificity factor, 25kDa subunit) HSP 1 Score: 265.0 bits (676), Expect = 2.9e-71 Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 1
BLAST of MELO3C006125 vs. TAIR10
Match: AT4G29820.1 (AT4G29820.1 homolog of CFIM-25) HSP 1 Score: 171.0 bits (432), Expect = 5.8e-43 Identity = 78/135 (57.78%), Postives = 99/135 (73.33%), Query Frame = 1
BLAST of MELO3C006125 vs. NCBI nr
Match: gi|449432171|ref|XP_004133873.1| (PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis sativus]) HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of MELO3C006125 vs. NCBI nr
Match: gi|641841106|gb|KDO60020.1| (hypothetical protein CISIN_1g039176mg, partial [Citrus sinensis]) HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of MELO3C006125 vs. NCBI nr
Match: gi|567858442|ref|XP_006421904.1| (hypothetical protein CICLE_v10005929mg [Citrus clementina]) HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of MELO3C006125 vs. NCBI nr
Match: gi|1009122478|ref|XP_015878023.1| (PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Ziziphus jujuba]) HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of MELO3C006125 vs. NCBI nr
Match: gi|590672648|ref|XP_007038670.1| (Cleavage/polyadenylation specificity factor, 25kDa subunit [Theobroma cacao]) HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75 Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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