MELO3C004756 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004756
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Family of Uncharacterized protein function (DUF662)
Location	chr12 : 10826943 .. 10830238 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATACATACATACATACCTTTAAAGCCATTGCGGCGGGTTAGGGTTTGGCCACCTAACAGAGAAAGAAAATCATCATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGTAAGTTAAGCTTGAAATCCACCATTTGATGAACATAATAAGATGATTGATGCATTGCATGGTTGGTTCCATTGATTAGGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGTCACAATTTCAATTTTCAAATTACTTCCTCTCTTCAATCAATCTCTCATAGTAACGCTACTTTTTTTTTCTCTTCTTTTTAATCACCTTTCATTTCATTTCATTTCAAAATCCATGGAATTTTATTATTTGATTTGAATTTTATTTAAATTCAACAATTGACATTTTTAACTTTTGGATTTTCGTCAAACGTCCACCATTTTGTTTTGTTTTTGTTTTTGTTTTTTTTTTTTTTGTTAATTGTAATGAAAAATAATCAAACTTAATAAATTATATTATTTAAATTAATTTTATACATCTTCCCTTAAAAAAAAAAATCTATATTTAGTGAAATATCTAAGTTAAAAAGGTATATCCTGAAACATATGAATTTAAATTTATAACCATTTCAACTCAAAACTAAATAATAAAGTTTATATTTTAAATTTTAGAACAAAATAGAAACTAAATTCACTTAGGTAAAAATGTATTTTTGTTTTTTTCTCATAAATAAATAAATAAATACTCAGGGTTACAATTTTATCCTTAAAAAAACATTTGGATTGCAAATATATTCTTTCATGGGTATAAATATTAAATATTTGAATGTCTTTTTGAATAATTAATGTTTGTATGTGAATTGTATGATAATTATTGTACGAAGGTCGAATATTTGTGTTCAAATTCTATAACTTGTATATAAAAACTAAAATCAAATAACTAGATAATCAACTAAAGAGTTATTTACAAAATGAAACTATTTACAAAATATAATAATATATATGGATGAATTTTACTATATTTTATAATTAATTTCAATATTATAAATATTTTCATATTGGGTTATTTTTCAAAATATCCAATAATGTAACAGATAATTAAATTTAACATCAATTAATTTATCATTATATTAATTAATAAAAGAAATAAAAATATATAATTACTTTTTAGTTAAACGTAATAACTAAAATAATTAAACTAATCTAAATTAATTAGAATATTGATAACTAACTACAATAGTTTATCTTAAATAAATAGTTTAGGTAGATGAAAAAAATATACTAGTTGAAATCTATTAAGTTTAAATAATATATTTATATTTAAAAATTAATTTAAATTAAAATAGTAATGAATATTTGATTTTAATTTATTAAGTAATTAAGCTATATTTTTTAATATTCTTCTTCCATATATAAAATTCCATACACTTTTGTAAGTTACTAAAAACCTATGTGAGATTGGGTTTTAAAGTTTGTAGATAATAATATCTTGGAGTAAAATGAATACTAAACATCTATAAGAGATTTTATTGAAAAACATAGGGAGCTAAATTAAGTTTTGGTGGTACCATAGTCCCTTCATCAAATTTTTCATTTTACACATAGACTATGAAATTTTTGTTTCATATTCAATTTTTATTTGATGAAGGGACTAAAAACAAATTTAGCTCTCTATGTTTTTCCTCAAGCTTGAAATCTCAAAATTTACATTTTTTAAGAGTTAAACTTTAACATATAAGAACTTTTAATTTTGTTGTAGATTCACTCTAAGTTTCAAATTTTGTATTAATGTGTTAAAAACCTATTAGGGTACATATGATATAAATATATAATAAAAAATATATGGAGTTGTTATTTTTTTAGAGCTCATAAATTAATACATTACATTTTTTTTTTGAAGGTAATACATGAATGTCATATTAAAAAACACACCACAATTTATAAACTATAATAATAATACAAAAAAATGTTTTAAATGACAACACTATTAAAAATATTTATAAATATAACAAAATTTTATAGTTCATTAATGATATATATAGAGATAGATAACTATTAGTATCTATTATCATCTATTAGTGATAAATTATAGATTTTGTTATATTTGTAAACATTCTAGTTCATTTTACAATATTTGGAAGAAAAAAACTAGATATTAAAAGATTAATAATCCGAAAAGATTTGTGATTTCAAAATTTTTAAAAGACTTAAACAAGTCTATACCCATTATAGCCCTTGGTGACATGATAAAATAAAAATGATATACATATACTTGTTTTGTTTATTTTTGTGTGTGGGAGAGAGTTGAAGAAGTATATTAGTGTGCATAACTAATATTTTGATTTATTTGGTCTCTATCAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGGTGACTTTTATTTCTTTCCTTTCCATAACCGTTTATTTGTGGTCGAAGTTATTAATTTTAGTATTCTTTTCAAAAATAACAAAATAAATTAAAAAATATTTATAAATATAATAACATATCATTATTTATCATCGATACATATTATCATTTATCGTTGATGGATGTCTAACAATTTGAATAACTTGTTGGTCAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAAGAAGTGTTCTTCTAAGTTCTAACTTGAATTAATCACCAACAACTTTGTTTGTATTTCCACATTTTTTTCTCCTCAACTCTCATATACATATCTTTTCTTTTTCGAAGTTTCCCATCAGAAGAAAAAAAAGAGAGAGGAGGGAGAAAAAAATGGAATTAACTTTGCCAACAAATGGGAATGACGTTTGCTTGTATTAATAAGTTTGATCACAACCACGTGAATACTGTGTTGATAGTGTGATGCATGTTTGACAATGATATTTTTCCATTTCT

mRNA sequence

ACATACATACATACATACCTTTAAAGCCATTGCGGCGGGTTAGGGTTTGGCCACCTAACAGAGAAAGAAAATCATCATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAAGAAGTGTTCTTCTAAGTTCTAACTTGAATTAATCACCAACAACTTTGTTTGTATTTCCACATTTTTTTCTCCTCAACTCTCATATACATATCTTTTCTTTTTCGAAGTTTCCCATCAGAAGAAAAAAAAGAGAGAGGAGGGAGAAAAAAATGGAATTAACTTTGCCAACAAATGGGAATGACGTTTGCTTGTATTAATAAGTTTGATCACAACCACGTGAATACTGTGTTGATAGTGTGATGCATGTTTGACAATGATATTTTTCCATTTCT

Coding sequence (CDS)

ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAA

Protein sequence

MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH*

Homology

[Close]

BLAST of MELO3C004756 vs. Swiss-Prot
Match: GORAB_RAT (RAB6-interacting golgin OS=Rattus norvegicus GN=Gorab PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08
Identity = 33/123 (26.83%), Postives = 58/123 (47.15%), Query Frame = 1


Query: 51  RAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLV 110
           R  EE+ +RKK  + + +  R  R +  T +L  I++EL+ + D +  ++  +R +ID  
Sbjct: 154 RLMEEKNKRKKALLAQAIAERSRRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 213

Query: 111 NKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKN 170
           + E         + E EY         K   K QL   L  ++ ++E  + +KLEEL + 
Sbjct: 214 SLEYSYARKRFDRAEAEYVTAKLDLQRKTETKEQLTEHLCTIIQQNELRKAQKLEELMRQ 273

Query: 171 IDI 174
           +D+
Sbjct: 274 LDV 276

[Close]

BLAST of MELO3C004756 vs. TrEMBL
Match: A0A0A0LY59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153510 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.4e-86
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 1


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGI-GSPLKEDQEEEISRSALALFRAKEEEIER 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIER
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIER 60

Query: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120
           KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL
Sbjct: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120

Query: 121 TCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 175
           TCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Sbjct: 121 TCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of MELO3C004756 vs. TrEMBL
Match: C6TK18_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G188000 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-64
Identity = 131/180 (72.78%), Postives = 156/180 (86.67%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ-----MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEE 60
           M T KQS+E QQ     +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKEE
Sbjct: 1   MATPKQSYEQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKEE 60

Query: 61  EIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELK 120
           EIER+KME+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKELK
Sbjct: 61  EIERRKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKELK 120

Query: 121 PLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           PLG TCQ+KEREYKE L++FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D LH
Sbjct: 121 PLGQTCQRKEREYKEALEVFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNLDTLH 175

[Close]

BLAST of MELO3C004756 vs. TrEMBL
Match: A0A0B2S1V7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008207 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-64
Identity = 131/180 (72.78%), Postives = 156/180 (86.67%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ-----MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEE 60
           M T KQS+E QQ     +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKEE
Sbjct: 1   MATPKQSYEQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKEE 60

Query: 61  EIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELK 120
           EIER+KME+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKELK
Sbjct: 61  EIERRKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKELK 120

Query: 121 PLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           PLG TCQ+KEREYKE L++FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D LH
Sbjct: 121 PLGQTCQRKEREYKEALEVFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNLDTLH 175

[Close]

BLAST of MELO3C004756 vs. TrEMBL
Match: I1LRD5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G086500 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-64
Identity = 131/181 (72.38%), Postives = 155/181 (85.64%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ------MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKE 60
           M T KQS+E QQ      +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKE
Sbjct: 1   MATPKQSYEQQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKE 60

Query: 61  EEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKEL 120
           EEIER+K+E+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKEL
Sbjct: 61  EEIERRKVEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKEL 120

Query: 121 KPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 176
           KPLG TCQ+KEREYKE LD FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D L
Sbjct: 121 KPLGQTCQRKEREYKEALDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTL 176

[Close]

BLAST of MELO3C004756 vs. TrEMBL
Match: A0A0B2QHZ0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_006600 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-64
Identity = 131/181 (72.38%), Postives = 155/181 (85.64%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ------MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKE 60
           M T KQS+E QQ      +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKE
Sbjct: 1   MATPKQSYEQQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKE 60

Query: 61  EEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKEL 120
           EEIER+K+E+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKEL
Sbjct: 61  EEIERRKVEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKEL 120

Query: 121 KPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 176
           KPLG TCQ+KEREYKE LD FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D L
Sbjct: 121 KPLGQTCQRKEREYKEALDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTL 176

[Close]

BLAST of MELO3C004756 vs. TAIR10
Match: AT2G27740.1 (AT2G27740.1 Family of unknown function (DUF662) )

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-56
Identity = 110/176 (62.50%), Postives = 144/176 (81.82%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEI 60
           M T +Q  E  Q   +QR+K+SG IS N     GSP+ +++EEE+S+SA ALF+AKE+EI
Sbjct: 1   MATTRQILEQPQSPFIQRIKSSGNISMN-----GSPMIDEKEEELSQSAFALFKAKEDEI 60

Query: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120
           ER+KME++++V+ +LG AEEAT+RLAEIREELE +TDPMRKE+S IRK++D +N+ELKPL
Sbjct: 61  ERRKMEVKDRVQKKLGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPL 120

Query: 121 GLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDI 174
           G +CQ+KERE+KE L+ +NEKN+EK+  VSKL+ELV ESEKLRM KLEELSK+I+I
Sbjct: 121 GQSCQRKEREFKEALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIEI 171

[Close]

BLAST of MELO3C004756 vs. TAIR10
Match: AT3G09980.1 (AT3G09980.1 Family of unknown function (DUF662) )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 104/138 (75.36%), Postives = 122/138 (88.41%), Query Frame = 1


Query: 38  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR 97
           ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+A+LGR EE TKRLA IREELEG+ DPMR
Sbjct: 41  EDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMR 100

Query: 98  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESE 157
           KEV+ +RKKID VNKELKPLG T QKKEREYKE L+ FNEKNREK QL+++LMELV ESE
Sbjct: 101 KEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESE 160

Query: 158 KLRMRKLEELSKNIDILH 176
           K+RM+KLEELSKNID +H
Sbjct: 161 KMRMKKLEELSKNIDSIH 178

[Close]

BLAST of MELO3C004756 vs. TAIR10
Match: AT3G52920.1 (AT3G52920.1 Family of unknown function (DUF662) )

HSP 1 Score: 195.7 bits (496), Expect = 2.5e-50
Identity = 99/138 (71.74%), Postives = 120/138 (86.96%), Query Frame = 1


Query: 38  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR 97
           ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMR
Sbjct: 27  EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86

Query: 98  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLME---LVN 157
           KEV+++RKKID VNKELKPLG T QKKEREYKE LD FNEKNREK QL++KLME   LV 
Sbjct: 87  KEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMGQLVG 146

Query: 158 ESEKLRMRKLEELSKNID 173
           ESEKLR++KL+ELS++ID
Sbjct: 147 ESEKLRLKKLDELSRSID 164

[Close]

BLAST of MELO3C004756 vs. TAIR10
Match: AT2G36410.1 (AT2G36410.1 Family of unknown function (DUF662) )

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-50
Identity = 107/172 (62.21%), Postives = 130/172 (75.58%), Query Frame = 1


Query: 4   QKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKME 63
           Q QS    Q Q+  N  ++ +   +      +ED  EE++RSAL+ FRAKE+EIE+++ME
Sbjct: 24  QPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSRED--EEMTRSALSAFRAKEDEIEKRRME 83

Query: 64  MREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQK 123
           +RE+++A+LGR E+ TKRL+ IREELE M DPMRKEVS +RKKID VNKELKPLG T QK
Sbjct: 84  VRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQK 143

Query: 124 KEREYKEVLDLFNEKNREKSQLVSKLME---LVNESEKLRMRKLEELSKNID 173
           KEREYKE LD FNEKNREK QL++KLME   LV ESEKLRM KLEELSK+I+
Sbjct: 144 KEREYKEALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIE 193

[Close]

BLAST of MELO3C004756 vs. TAIR10
Match: AT5G03660.1 (AT5G03660.1 Family of unknown function (DUF662) )

HSP 1 Score: 185.7 bits (470), Expect = 2.5e-47
Identity = 98/172 (56.98%), Postives = 131/172 (76.16%), Query Frame = 1


Query: 2   TTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKK 61
           T   Q   + Q +R+K+   +S +++    S +K++ ++E+S  AL+ F+AKEEEIE+KK
Sbjct: 4   TETSQPAPSDQGRRLKDQ--LSESMS--FSSQMKKE-DDELSMKALSAFKAKEEEIEKKK 63

Query: 62  MEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTC 121
           ME+RE+V+A+LGR E+ +KRLA IREELEG  DPMRKEV+ +RKKID ++KELKPLG T 
Sbjct: 64  MEIRERVQAQLGRVEDESKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTV 123

Query: 122 QKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDI 174
           QKKE EYK+ L+ FNEKN+EK +L++KL EL  ESEK R +KLEELSKNID+
Sbjct: 124 QKKETEYKDALEAFNEKNKEKVELITKLQELEGESEKFRFKKLEELSKNIDL 170

[Close]

BLAST of MELO3C004756 vs. NCBI nr
Match: gi|659071754|ref|XP_008461743.1| (PREDICTED: RAB6-interacting golgin [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 1.9e-89
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60

Query: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120
           KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT
Sbjct: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120

Query: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Sbjct: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of MELO3C004756 vs. NCBI nr
Match: gi|449443426|ref|XP_004139478.1| (PREDICTED: uncharacterized protein LOC101203874 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.0e-86
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 1


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGI-GSPLKEDQEEEISRSALALFRAKEEEIER 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIER
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIER 60

Query: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120
           KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL
Sbjct: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120

Query: 121 TCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 175
           TCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Sbjct: 121 TCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of MELO3C004756 vs. NCBI nr
Match: gi|359807315|ref|NP_001241375.1| (uncharacterized protein LOC100796368 [Glycine max])

HSP 1 Score: 253.8 bits (647), Expect = 2.2e-64
Identity = 131/180 (72.78%), Postives = 156/180 (86.67%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ-----MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEE 60
           M T KQS+E QQ     +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKEE
Sbjct: 1   MATPKQSYEQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKEE 60

Query: 61  EIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELK 120
           EIER+KME+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKELK
Sbjct: 61  EIERRKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKELK 120

Query: 121 PLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           PLG TCQ+KEREYKE L++FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D LH
Sbjct: 121 PLGQTCQRKEREYKEALEVFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNLDTLH 175

[Close]

BLAST of MELO3C004756 vs. NCBI nr
Match: gi|734375883|gb|KHN21121.1| (hypothetical protein glysoja_006600 [Glycine soja])

HSP 1 Score: 253.1 bits (645), Expect = 3.7e-64
Identity = 131/181 (72.38%), Postives = 155/181 (85.64%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ------MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKE 60
           M T KQS+E QQ      +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKE
Sbjct: 1   MATPKQSYEQQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKE 60

Query: 61  EEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKEL 120
           EEIER+K+E+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKEL
Sbjct: 61  EEIERRKVEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKEL 120

Query: 121 KPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 176
           KPLG TCQ+KEREYKE LD FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D L
Sbjct: 121 KPLGQTCQRKEREYKEALDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTL 176

[Close]

BLAST of MELO3C004756 vs. NCBI nr
Match: gi|351723169|ref|NP_001238549.1| (uncharacterized protein LOC100499699 [Glycine max])

HSP 1 Score: 251.9 bits (642), Expect = 8.2e-64
Identity = 130/181 (71.82%), Postives = 155/181 (85.64%), Query Frame = 1


Query: 1   MTTQKQSWEAQQ------MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKE 60
           M T KQS+E QQ      +QRV+NSGMI+SN      SP+++D+EEE+SRSALA+FRAKE
Sbjct: 1   MATPKQSYEQQQQQQQPNVQRVRNSGMINSNQ-----SPMRDDKEEEMSRSALAMFRAKE 60

Query: 61  EEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKEL 120
           EEIER+K+E+R+KV A LGR EE TKRLAEIREELEG+TDP+RKEV+ +RKKID VNKEL
Sbjct: 61  EEIERRKVEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKEL 120

Query: 121 KPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 176
           KPLG TCQ++EREYKE LD FNEKN+EK+QLV+KLMELV ESEKLRM+KLEELSKN+D L
Sbjct: 121 KPLGQTCQRREREYKEALDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTL 176

The following BLAST results are available for this feature:

BLAST of MELO3C004756 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GORAB_RAT	2.2e-08	26.83	RAB6-interacting golgin OS=Rattus norvegicus GN=Gorab PE=2 SV=2	[more]

BLAST of MELO3C004756 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY59_CUCSA	1.4e-86	98.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153510 PE=4 SV=1	[more]
C6TK18_SOYBN	1.5e-64	72.78	Uncharacterized protein OS=Glycine max GN=GLYMA_11G188000 PE=2 SV=1	[more]
A0A0B2S1V7_GLYSO	1.5e-64	72.78	Uncharacterized protein OS=Glycine soja GN=glysoja_008207 PE=4 SV=1	[more]
I1LRD5_SOYBN	2.6e-64	72.38	Uncharacterized protein OS=Glycine max GN=GLYMA_12G086500 PE=4 SV=1	[more]
A0A0B2QHZ0_GLYSO	2.6e-64	72.38	Uncharacterized protein OS=Glycine soja GN=glysoja_006600 PE=4 SV=1	[more]

BLAST of MELO3C004756 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27740.1	2.3e-56	62.50	Family of unknown function (DUF662)	[more]
AT3G09980.1	1.3e-54	75.36	Family of unknown function (DUF662)	[more]
AT3G52920.1	2.5e-50	71.74	Family of unknown function (DUF662)	[more]
AT2G36410.1	3.2e-50	62.21	Family of unknown function (DUF662)	[more]
AT5G03660.1	2.5e-47	56.98	Family of unknown function (DUF662)	[more]

BLAST of MELO3C004756 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071754\|ref\|XP_008461743.1\|	1.9e-89	100.00	PREDICTED: RAB6-interacting golgin [Cucumis melo]	[more]
gi\|449443426\|ref\|XP_004139478.1\|	2.0e-86	98.29	PREDICTED: uncharacterized protein LOC101203874 [Cucumis sativus]	[more]
gi\|359807315\|ref\|NP_001241375.1\|	2.2e-64	72.78	uncharacterized protein LOC100796368 [Glycine max]	[more]
gi\|734375883\|gb\|KHN21121.1\|	3.7e-64	72.38	hypothetical protein glysoja_006600 [Glycine soja]	[more]
gi\|351723169\|ref\|NP_001238549.1\|	8.2e-64	71.82	uncharacterized protein LOC100499699 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007033	GORAB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0045492	xylan biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU61513	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004756T1	MELO3C004756T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU61513	MU61513	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 20..172 score: 7.6
None	No IPR available	unknown	Coil	Coil	coord: 121..155 score: -coord: 47..88 scor
None	No IPR available	PANTHER	PTHR21470	NTKL-BINDING PROTEIN 1	coord: 1..175 score: 1.1
None	No IPR available	PANTHER	PTHR21470:SF4	SUBFAMILY NOT NAMED	coord: 1..175 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004756	Csa1G153510	Cucumber (Chinese Long) v2	cumeB015
MELO3C004756	Cla003550	Watermelon (97103) v1	mewmB159
MELO3C004756	ClCG01G012520	Watermelon (Charleston Gray)	mewcgB141
MELO3C004756	Cla97C01G011740	Watermelon (97103) v2	mewmbB143
MELO3C004756	Bhi08G000068	Wax gourd	mewgoB174
MELO3C004756	CSPI01G14440	Wild cucumber (PI 183967)	cpimeB011
MELO3C004756	Cucsa.199940	Cucumber (Gy14) v1	cgymeB365
MELO3C004756	CmaCh13G002850	Cucurbita maxima (Rimu)	cmameB196
MELO3C004756	Lsi03G001020	Bottle gourd (USVL1VR-Ls)	lsimeB244
MELO3C004756	CsGy1G014370	Cucumber (Gy14) v2	cgybmeB010
MELO3C004756	CsaV3_1G014610	Cucumber (Chinese Long) v3	cucmeB010

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None