Lsi09G000420 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G000420
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEthylene-responsive transcription factor, putative
Locationchr09 : 380446 .. 381270 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTCCGAACATGATTTGCCGGAAACCCATGTCGGAACCGCCGGGAAACTTAGCCGGCCGGAGCTTTACCGGTTCAAGAATTGTTCGGATTTCAATGACTGACCCGGATGCTACGGACTCGTCATCCAGTGACGAAGATGCCGTGAATTTCATGCGCCGCCGTGTGAAGAGGTACGAAGTTGAGTTTACCATTGGAAGGGCGGCGGGGGGCGGGGGTGGTGGTTCCCGGAAGTTAAAGAGGAAGAGAAAGGTGATGGGTAATATGAGGAAATTTCGCGGTGTCCGACAGCGACCGTGGGGGAAATGGGCGGCGGAGATACGGGACTCCAGCCGCCGTGTACGACTGTGGTTGGGGACTTACGACACGGCGGAGGAGGCCGCAATGGTGTACGACAGCGCCGCCGTGAAGCTTCAAGGACCGGGGGCTTTAACAAACTTCCCCACTCATCCGCCACCGCCATTTACCGGCGAAGAACCGTCGTCTCCGACGAACATCTCTTCTCCAACGTCGGTCCTTTACAGAACCCAATTCACCGAATGCTCGCCGTCTAACCGGGCCACCGAAACCGGCTGTGCCGTCGACGAATCGCCGGTGGTCGACTGCCCCTTCTCCGACGACATATTCAAATCGATTCTTTTCGAAACGCCTCTGTTTTCAGAGTACCAATCAACTCTCATACCAGAAATACCATGGATCGGCGGGGTCAGCGGCGCTGGCTCCGGCGATTTGTTGGCGGCGGCGGGGTCCGACGAAAGAGTTGAAGATCATGATTATTTTGAAGAAATTTTGATGGGGTCGGATCCTTTGGTGGTCCTTTGA

mRNA sequence

ATGGAAGTTCCGAACATGATTTGCCGGAAACCCATGTCGGAACCGCCGGGAAACTTAGCCGGCCGGAGCTTTACCGGTTCAAGAATTGTTCGGATTTCAATGACTGACCCGGATGCTACGGACTCGTCATCCAGTGACGAAGATGCCGTGAATTTCATGCGCCGCCGTGTGAAGAGGTACGAAGTTGAGTTTACCATTGGAAGGGCGGCGGGGGGCGGGGGTGGTGGTTCCCGGAAGTTAAAGAGGAAGAGAAAGGTGATGGGTAATATGAGGAAATTTCGCGGTGTCCGACAGCGACCGTGGGGGAAATGGGCGGCGGAGATACGGGACTCCAGCCGCCGTGTACGACTGTGGTTGGGGACTTACGACACGGCGGAGGAGGCCGCAATGGTGTACGACAGCGCCGCCGTGAAGCTTCAAGGACCGGGGGCTTTAACAAACTTCCCCACTCATCCGCCACCGCCATTTACCGGCGAAGAACCGTCGTCTCCGACGAACATCTCTTCTCCAACGTCGGTCCTTTACAGAACCCAATTCACCGAATGCTCGCCGTCTAACCGGGCCACCGAAACCGGCTGTGCCGTCGACGAATCGCCGGTGGTCGACTGCCCCTTCTCCGACGACATATTCAAATCGATTCTTTTCGAAACGCCTCTGTTTTCAGAGTACCAATCAACTCTCATACCAGAAATACCATGGATCGGCGGGGTCAGCGGCGCTGGCTCCGGCGATTTGTTGGCGGCGGCGGGGTCCGACGAAAGAGTTGAAGATCATGATTATTTTGAAGAAATTTTGATGGGGTCGGATCCTTTGGTGGTCCTTTGA

Coding sequence (CDS)

ATGGAAGTTCCGAACATGATTTGCCGGAAACCCATGTCGGAACCGCCGGGAAACTTAGCCGGCCGGAGCTTTACCGGTTCAAGAATTGTTCGGATTTCAATGACTGACCCGGATGCTACGGACTCGTCATCCAGTGACGAAGATGCCGTGAATTTCATGCGCCGCCGTGTGAAGAGGTACGAAGTTGAGTTTACCATTGGAAGGGCGGCGGGGGGCGGGGGTGGTGGTTCCCGGAAGTTAAAGAGGAAGAGAAAGGTGATGGGTAATATGAGGAAATTTCGCGGTGTCCGACAGCGACCGTGGGGGAAATGGGCGGCGGAGATACGGGACTCCAGCCGCCGTGTACGACTGTGGTTGGGGACTTACGACACGGCGGAGGAGGCCGCAATGGTGTACGACAGCGCCGCCGTGAAGCTTCAAGGACCGGGGGCTTTAACAAACTTCCCCACTCATCCGCCACCGCCATTTACCGGCGAAGAACCGTCGTCTCCGACGAACATCTCTTCTCCAACGTCGGTCCTTTACAGAACCCAATTCACCGAATGCTCGCCGTCTAACCGGGCCACCGAAACCGGCTGTGCCGTCGACGAATCGCCGGTGGTCGACTGCCCCTTCTCCGACGACATATTCAAATCGATTCTTTTCGAAACGCCTCTGTTTTCAGAGTACCAATCAACTCTCATACCAGAAATACCATGGATCGGCGGGGTCAGCGGCGCTGGCTCCGGCGATTTGTTGGCGGCGGCGGGGTCCGACGAAAGAGTTGAAGATCATGATTATTTTGAAGAAATTTTGATGGGGTCGGATCCTTTGGTGGTCCTTTGA

Protein sequence

MEVPNMICRKPMSEPPGNLAGRSFTGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKRKVMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGEEPSSPTNISSPTSVLYRTQFTECSPSNRATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQSTLIPEIPWIGGVSGAGSGDLLAAAGSDERVEDHDYFEEILMGSDPLVVL
Homology
[Close]
BLAST of Lsi09G000420 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-34
Identity = 115/286 (40.21%), Postives = 152/286 (53.15%), Query Frame = 1 

Query: 28  RIVRISMTDPDATDSSSSDEDAVNF-----MRRRVKRYEVEFTIGRAAGGGGGGSRKLKR 87
           RI+RIS+TDP ATDSSS +E+ V+F      RRRVK+Y  E  +           +K ++
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKRK 70

Query: 88  KRKVMGNM------RKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSAA 147
           KR V   +      RKFRGVRQRPWGKWAAEIRD SRRVR+WLGT+DTAEEAA+VYD+AA
Sbjct: 71  KRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAA 130

Query: 148 VKLQGPGALTNFPTHPPPPFTGEEPSSPTNIS--------------SPTSVLYRTQFTEC 207
           ++L+GP A  NF   PPPP T     + T +               SP SVL  + F+  
Sbjct: 131 IQLRGPNAELNF---PPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVL-ESPFSGE 190

Query: 208 SPSNRATETGCAVDESPVVDCP-----------FS-DDIFKSILFETPLFSEYQSTLIPE 267
           S + +    G +  E  V   P           FS DD+F    F T +   +   L  +
Sbjct: 191 STAVKEEFVGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFG---FSTSMSESFGGDLFGD 250

Query: 268 IPWIGGVSGAGSGDLLAAAGSDERVEDHDYFEEI--LMGSDPLVVL 275
             +     G+G G    +  S   VEDH  F++I  L GSDP++ +
Sbjct: 251 NLFADMSFGSGFGFGSGSGFSSWHVEDH--FQDIGDLFGSDPVLTV 287

[Close]
BLAST of Lsi09G000420 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.0e-33
Identity = 108/272 (39.71%), Postives = 140/272 (51.47%), Query Frame = 1 

Query: 27  SRIVRISMTDPDATDSSSSDEDAVN----FMRRRVKRY--EVEFTIGRAAGGGGGGSRKL 86
           +RI+RIS+TDPDATDSSS DE+  +      RRRVK++  EV    G    G  G     
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 87  KRKRKVMGNM----------------RKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDT 146
           KR+++ + +                 +KFRGVRQRPWGKWAAEIRD  +RVRLWLGTY+T
Sbjct: 94  KRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153

Query: 147 AEEAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGE-EPSSPTNISSPTSVLYRTQFTECS 206
           AEEAAMVYD+AA++L+GP ALTNF   P      +  P SP       +   +   T  S
Sbjct: 154 AEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASS 213

Query: 207 PSNRATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQSTLIPEIPWIGGVSGAGSG 266
             +R++   C      V+  PF+ D F  I       S   + ++ E P +  VS   S 
Sbjct: 214 SISRSSSNDCLCSPVSVLRSPFAVDEFSGI-----SSSPVAAVVVKEEPSMTTVSETFS- 273

Query: 267 DLLAAAGSDERVEDH------DYFEEILMGSD 270
           D  A   SD+ V D       DY    L G D
Sbjct: 274 DFSAPLFSDDDVFDFRSSVVPDYLGGDLFGED 299

[Close]
BLAST of Lsi09G000420 vs. Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-31
Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 1 

Query: 27  SRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKRK- 86
           +R+VR+SMTD DATD SSSDE+   F RRRVKR   E  +  ++   G  S    + RK 
Sbjct: 40  ARLVRVSMTDRDATD-SSSDEEEFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKR 99

Query: 87  -----------VMG-NMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYD 146
                      V G N +K+RGVRQRPWGKWAAEIRD  +R R+WLGT+ TAEEAA+VYD
Sbjct: 100 INVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYD 159

Query: 147 SAAVKLQGPGALTNFPTHPPPPFTGEEPSSP---------------TNISSPTSVL-YRT 182
           +AA+KL+GP ALTNF   P P    E+   P                ++SSPTSVL Y+T
Sbjct: 160 NAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNYQT 219

[Close]
BLAST of Lsi09G000420 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.0e-29
Identity = 94/240 (39.17%), Postives = 120/240 (50.00%), Query Frame = 1 

Query: 30  VRISMTDPDATDSSS-SDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKR---- 89
           V I  TDPDATDSSS  DE+   F RRRVKR+  E T+  +      G     RKR    
Sbjct: 39  VSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSS 98

Query: 90  ------------------KVMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAE 149
                              V G ++KFRGVRQRPWGKWAAEIRD  +R R+WLGT++TAE
Sbjct: 99  SDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAE 158

Query: 150 EAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGEEPSSPTNISSPTSVLYRTQFTECSPSN 209
           EAA+VYD+AA++L+GP ALTNF     PP   EE   P  +     V+  T  T  + S+
Sbjct: 159 EAAVVYDNAAIRLRGPDALTNFSI---PPQEEEEEEEPEPVIEEKPVIMTTP-TPTTSSS 218

Query: 210 RATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQSTLIPEIPW--IGGVSGAGSGD 245
            +TE       SP        +  + +  + P  S      +   PW   G  +G G  D
Sbjct: 219 ESTEEDLQHLSSPTSVLNHRSEEIQQV--QQPFKSAKPEPGVSNAPWWHTGFNTGLGESD 272

[Close]
BLAST of Lsi09G000420 vs. Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.3e-27
Identity = 78/165 (47.27%), Postives = 96/165 (58.18%), Query Frame = 1 

Query: 28  RIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKRKVM 87
           R+VRI +TD DATDSS  D++  N +RR VKR+  E  +  +    G   R+       +
Sbjct: 36  RVVRIILTDADATDSS--DDEGRNTVRR-VKRHVTEINLMPSTKSIGDRKRRSVSPDSDV 95

Query: 88  GNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSAAVKLQGPGALTN 147
              +KFRGVRQRPWG+WAAEIRD +R  R+WLGTYDT EEAA+VYD AAVKL+GP A+TN
Sbjct: 96  TRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTN 155

Query: 148 FPTHPPPPFT-------------GEEPSSPTNISSPTSVLYRTQF 180
           FP       T             G + S      SPTSVL    F
Sbjct: 156 FPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVLCDNDF 197

[Close]
BLAST of Lsi09G000420 vs. TrEMBL
Match: A0A0A0KJI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139630 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.2e-107
Identity = 214/278 (76.98%), Postives = 230/278 (82.73%), Query Frame = 1 

Query: 1   MEVPNMICRKPMSEPPGNLAGRSFTGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRY 60
           MEVP ++ RKP+SEP G    RS TGSRIVRISM DPDATDSSSSDED +N+  RRVKRY
Sbjct: 1   MEVPTILRRKPISEPHG----RSSTGSRIVRISMADPDATDSSSSDEDTLNYTSRRVKRY 60

Query: 61  EVEFTIGRAAGGGGGGSRKLKRKRK--VMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLW 120
           E+EF+IG A  G G G RKLKRKRK   +GN+ KFRGVR+RPWGKWAAEIRDS  RVRLW
Sbjct: 61  EIEFSIGMAGDGDGCGDRKLKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDSGSRVRLW 120

Query: 121 LGTYDTAEEAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGEEPSSPTNISSPTSVLYRTQ 180
           LGTYDTAEEAAMVYDSAA+KL+GP ALTNFPTHPPPP TG+EPSSPTNISSPTSVL+RT 
Sbjct: 121 LGTYDTAEEAAMVYDSAALKLRGPAALTNFPTHPPPPSTGQEPSSPTNISSPTSVLHRTH 180

Query: 181 FTECSPSNRATETGCAVDESPVVD-CPFSDDIFKSILFETPLFSEYQSTLIPEIPWIGGV 240
           FTECS S R      AV ESPVVD CPFSDDIFKSIL E+PLF EYQSTLI E PWI   
Sbjct: 181 FTECSSSYR------AVIESPVVDYCPFSDDIFKSILLESPLFPEYQSTLITEAPWIDAG 240

Query: 241 SGAGSGDL-LAAAGSDERVEDHDYFEEILMGSDPLVVL 275
            GA SGDL +AAAGSDERVEDHD FEEILMGSDPLVVL
Sbjct: 241 GGARSGDLVVAAAGSDERVEDHDCFEEILMGSDPLVVL 268

[Close]
BLAST of Lsi09G000420 vs. TrEMBL
Match: A5B445_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02400 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 111/199 (55.78%), Postives = 127/199 (63.82%), Query Frame = 1 

Query: 28  RIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTI-----------GRAAGGGGGG 87
           R+VRIS+TDPDATDSSS +ED + F R+RVKRY  E  I           GR  G G G 
Sbjct: 37  RVVRISVTDPDATDSSSDEEDEL-FSRQRVKRYTNEINIATVSKSIAPVAGRKRGAGAGE 96

Query: 88  SRKLKRKRKVMG--NMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDS 147
               +R  KV    N RKFRGVRQRPWGKWAAEIRD +RRVRLWLGTYDTAEEAAMVYD+
Sbjct: 97  MAPCRRPMKVAAPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDN 156

Query: 148 AAVKLQGPGALTNFPTHPPPP--------FTGEEPSSPT-NISSPTSVL-YRTQFT---E 201
           AA+KL+GP ALTNF T PPPP         +G E    + N+SSPTSVL +RT  +   E
Sbjct: 157 AAIKLRGPDALTNFVTPPPPPKPEINLTAVSGYESGDESRNLSSPTSVLHFRTHSSSTDE 216

[Close]
BLAST of Lsi09G000420 vs. TrEMBL
Match: I1JYV5_SOYBN (AP2-EREBP transcription factor OS=Glycine max GN=Glyma04g41740.1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 129/309 (41.75%), Postives = 164/309 (53.07%), Query Frame = 1 

Query: 25  TGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKR 84
           T  RIVRIS TDPDATDSSS DE+    +R+R+KRY  +  I  AA        K+ RKR
Sbjct: 34  TERRIVRISYTDPDATDSSS-DEEGFPLVRKRMKRYVNQIEIETAA-------EKVVRKR 93

Query: 85  KV---------MGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSA 144
                      + + +KFRGVRQRPWGKWAAEIRD +RRVRLWLGTYDTAEEAAMVYD+A
Sbjct: 94  PAGEPCRRPAKLHSGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNA 153

Query: 145 AVKLQGPGALTNFPTHPPPPFTGEEPSSPT----------------------NISSPTSV 204
           A++L+GP ALTNF T P      E PS  T                      N+SSPTSV
Sbjct: 154 AIRLRGPDALTNFLTPP----QRESPSQATTVAVTEEASGSGYDSGDDHCQHNLSSPTSV 213

Query: 205 LYRTQFTECSPSNRATETGC-------AVDESPVVDCPFSDDIFKSILFETP-----LFS 264
           L+    +E    +      C       A+D  P+   P  D++F    FETP     LF 
Sbjct: 214 LHFRSNSESDQKSEQVLRECEGEGEFLALDNMPL---PAWDEVFN---FETPEYPPLLFQ 273

Query: 265 E------YQSTLIPE-IPWIGGVSGAGSGDLLAAAGSD---------ERVEDHDYFEEIL 275
           E      YQS ++ E +P+      + S  +LA +  D            +  D+F++IL
Sbjct: 274 EGNFLHDYQSQMLGETVPFSSDQGFSDSSIVLADSLIDFDKACPPPSTLCQVDDFFQDIL 324

[Close]
BLAST of Lsi09G000420 vs. TrEMBL
Match: A0A151TGX6_CAJCA (Ethylene-responsive transcription factor CRF4 OS=Cajanus cajan GN=KK1_012560 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.4e-37
Identity = 127/303 (41.91%), Postives = 162/303 (53.47%), Query Frame = 1 

Query: 23  SFTGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGG----GGGSR 82
           S T SRIVRIS TDPDATDSSS DE     +R R+KR+  +  I  AA          + 
Sbjct: 21  SQTNSRIVRISYTDPDATDSSSDDE-GTPVLRHRMKRFVNQIQIQTAASNSRKRPAADTS 80

Query: 83  KLKRKRKVMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSAAVK 142
             +R+ K+ G  +KFRGVRQRPWGKWAAEIRD  R+VRLWLGTYDTAEEAAMVYD+AA++
Sbjct: 81  SCRRQVKLHGG-KKFRGVRQRPWGKWAAEIRDPGRKVRLWLGTYDTAEEAAMVYDNAAIR 140

Query: 143 LQGPGALTNFPTHPPPPFTG-------EEPS------------SPTNISSPTSVLY---- 202
           L+GP ALTNF T P     G       EE S               N+SSPTSVL+    
Sbjct: 141 LRGPDALTNFVTAPAREAAGMKMGAVKEEASGCGYEWSEDNCEEQHNLSSPTSVLHFRSE 200

Query: 203 -RTQFTECSPSNRATETGCAVDES----PVVDCPFSDDIFKSILFETPLFSEYQSTLIPE 262
            R++  +C      TE     DE+     V + P  DD+F     + PL  +    L P+
Sbjct: 201 ERSESEKCEQGEGETE-ATLFDETGEFFSVDNMPAWDDVFNFEAPQYPLLFQDDEPLHPD 260

Query: 263 -------IPWIGGVSGAGSGDLLA----------AAGSDERVEDHDYFEEILM--GSDPL 275
                  +P+    +   S  LLA          +  S  +++ +DYF++IL   GSDPL
Sbjct: 261 SHLLDQTLPFSPEQAFTHSSILLADSLIDFDKACSPSSTSQLDPYDYFQDILFASGSDPL 320

[Close]
BLAST of Lsi09G000420 vs. TrEMBL
Match: A0A0A0LB30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357110 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.1e-37
Identity = 108/227 (47.58%), Postives = 131/227 (57.71%), Query Frame = 1 

Query: 27  SRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGG---------GGGS 86
           SR+VRIS+TDPDATDSSS ++D   F R+RVK+Y  E  I                 G  
Sbjct: 31  SRVVRISVTDPDATDSSSDEDDF--FERQRVKKYINEIKIQSGCRNNLLPSCRKRPAGDR 90

Query: 87  RKLKRKRKVMG--NMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSA 146
            + +R+ KV+   N +KFRGVRQRPWGKWAAEIRD +RRVRLWLGTYDTAEEAAMVYD+A
Sbjct: 91  SEFRRQGKVVPPTNGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNA 150

Query: 147 AVKLQGPGALTNFPTHPPPPFTGEEPSSPT----------------NISSPTSVL-YRTQ 206
           A++L+GP ALTNF T PP P   +E  +                  N+SSPTSVL +RT 
Sbjct: 151 AIQLRGPDALTNFATPPPVPMPEKEVETANIPSVSGSYYDSSEESHNLSSPTSVLHFRT- 210

Query: 207 FTECSPSNRATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQS 226
                PS   +E     D+      PF DD F     ET    EY +
Sbjct: 211 -----PSPEESEKPPKSDDLQKPPAPFVDDQFHECQGETSFTEEYHT 249

[Close]
BLAST of Lsi09G000420 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 115/286 (40.21%), Postives = 152/286 (53.15%), Query Frame = 1 

Query: 28  RIVRISMTDPDATDSSSSDEDAVNF-----MRRRVKRYEVEFTIGRAAGGGGGGSRKLKR 87
           RI+RIS+TDP ATDSSS +E+ V+F      RRRVK+Y  E  +           +K ++
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKRK 70

Query: 88  KRKVMGNM------RKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSAA 147
           KR V   +      RKFRGVRQRPWGKWAAEIRD SRRVR+WLGT+DTAEEAA+VYD+AA
Sbjct: 71  KRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAA 130

Query: 148 VKLQGPGALTNFPTHPPPPFTGEEPSSPTNIS--------------SPTSVLYRTQFTEC 207
           ++L+GP A  NF   PPPP T     + T +               SP SVL  + F+  
Sbjct: 131 IQLRGPNAELNF---PPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVL-ESPFSGE 190

Query: 208 SPSNRATETGCAVDESPVVDCP-----------FS-DDIFKSILFETPLFSEYQSTLIPE 267
           S + +    G +  E  V   P           FS DD+F    F T +   +   L  +
Sbjct: 191 STAVKEEFVGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFG---FSTSMSESFGGDLFGD 250

Query: 268 IPWIGGVSGAGSGDLLAAAGSDERVEDHDYFEEI--LMGSDPLVVL 275
             +     G+G G    +  S   VEDH  F++I  L GSDP++ +
Sbjct: 251 NLFADMSFGSGFGFGSGSGFSSWHVEDH--FQDIGDLFGSDPVLTV 287

[Close]
BLAST of Lsi09G000420 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-34
Identity = 108/272 (39.71%), Postives = 140/272 (51.47%), Query Frame = 1 

Query: 27  SRIVRISMTDPDATDSSSSDEDAVN----FMRRRVKRY--EVEFTIGRAAGGGGGGSRKL 86
           +RI+RIS+TDPDATDSSS DE+  +      RRRVK++  EV    G    G  G     
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 87  KRKRKVMGNM----------------RKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDT 146
           KR+++ + +                 +KFRGVRQRPWGKWAAEIRD  +RVRLWLGTY+T
Sbjct: 94  KRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153

Query: 147 AEEAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGE-EPSSPTNISSPTSVLYRTQFTECS 206
           AEEAAMVYD+AA++L+GP ALTNF   P      +  P SP       +   +   T  S
Sbjct: 154 AEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASS 213

Query: 207 PSNRATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQSTLIPEIPWIGGVSGAGSG 266
             +R++   C      V+  PF+ D F  I       S   + ++ E P +  VS   S 
Sbjct: 214 SISRSSSNDCLCSPVSVLRSPFAVDEFSGI-----SSSPVAAVVVKEEPSMTTVSETFS- 273

Query: 267 DLLAAAGSDERVEDH------DYFEEILMGSD 270
           D  A   SD+ V D       DY    L G D
Sbjct: 274 DFSAPLFSDDDVFDFRSSVVPDYLGGDLFGED 299

[Close]
BLAST of Lsi09G000420 vs. TAIR10
Match: AT4G27950.1 (AT4G27950.1 cytokinin response factor 4)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 1 

Query: 27  SRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKRK- 86
           +R+VR+SMTD DATD SSSDE+   F RRRVKR   E  +  ++   G  S    + RK 
Sbjct: 40  ARLVRVSMTDRDATD-SSSDEEEFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKR 99

Query: 87  -----------VMG-NMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYD 146
                      V G N +K+RGVRQRPWGKWAAEIRD  +R R+WLGT+ TAEEAA+VYD
Sbjct: 100 INVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYD 159

Query: 147 SAAVKLQGPGALTNFPTHPPPPFTGEEPSSP---------------TNISSPTSVL-YRT 182
           +AA+KL+GP ALTNF   P P    E+   P                ++SSPTSVL Y+T
Sbjct: 160 NAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNYQT 219

[Close]
BLAST of Lsi09G000420 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 94/240 (39.17%), Postives = 120/240 (50.00%), Query Frame = 1 

Query: 30  VRISMTDPDATDSSS-SDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKR---- 89
           V I  TDPDATDSSS  DE+   F RRRVKR+  E T+  +      G     RKR    
Sbjct: 39  VSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSS 98

Query: 90  ------------------KVMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAE 149
                              V G ++KFRGVRQRPWGKWAAEIRD  +R R+WLGT++TAE
Sbjct: 99  SDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAE 158

Query: 150 EAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGEEPSSPTNISSPTSVLYRTQFTECSPSN 209
           EAA+VYD+AA++L+GP ALTNF     PP   EE   P  +     V+  T  T  + S+
Sbjct: 159 EAAVVYDNAAIRLRGPDALTNFSI---PPQEEEEEEEPEPVIEEKPVIMTTP-TPTTSSS 218

Query: 210 RATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQSTLIPEIPW--IGGVSGAGSGD 245
            +TE       SP        +  + +  + P  S      +   PW   G  +G G  D
Sbjct: 219 ESTEEDLQHLSSPTSVLNHRSEEIQQV--QQPFKSAKPEPGVSNAPWWHTGFNTGLGESD 272

[Close]
BLAST of Lsi09G000420 vs. TAIR10
Match: AT3G61630.1 (AT3G61630.1 cytokinin response factor 6)

HSP 1 Score: 121.7 bits (304), Expect = 7.0e-28
Identity = 88/202 (43.56%), Postives = 114/202 (56.44%), Query Frame = 1 

Query: 18  NLAGRSFTGS-RIVRISMTDPDATDSSSSDEDAVNF-MRRRVKRY--EVEFTIGRAAGGG 77
           N+A     GS R+VRI++TDP ATDSSS D+D  N  +  RVKRY  E+ F  G ++   
Sbjct: 18  NVAATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIRFCQGESSSST 77

Query: 78  GGGSRKLKRKRKVMGN--------MRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTA 137
                K K +  V+           +K+RGVRQRPWGK+AAEIRD S R R+WLGT+ TA
Sbjct: 78  AARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTA 137

Query: 138 EEAAMVYDSAAVKLQGPGALTNFPTHP-PPPFTGEEP--------SSPTNISSPTSVL-- 190
           EEAA+ YD AA+ L+GP ALTNF T P P P    +          S  ++ SPTSVL  
Sbjct: 138 EEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSRQSLHSPTSVLRF 197

[Close]
BLAST of Lsi09G000420 vs. NCBI nr
Match: gi|659074380|ref|XP_008437573.1| (PREDICTED: ethylene-responsive transcription factor CRF1-like [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.9e-113
Identity = 212/274 (77.37%), Postives = 233/274 (85.04%), Query Frame = 1 

Query: 1   MEVPNMICRKPMSEPPGNLAGRSFTGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRY 60
           MEV  ++ RKP+SEPPGN  GRS TGSRIVRISMTDPDATDSSSSDED +N+ RRRVKRY
Sbjct: 1   MEVSTILRRKPISEPPGNFHGRSSTGSRIVRISMTDPDATDSSSSDEDTLNYPRRRVKRY 60

Query: 61  EVEFTIGRAAGGGGGGSRKLKRKRKVMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLG 120
           E+E ++G A  GGG G+RK KRKRK +GN+ KFRGVR+RPWGKWAAEIRD+ RRVRLWLG
Sbjct: 61  EIELSVGTAGDGGGCGARKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDTGRRVRLWLG 120

Query: 121 TYDTAEEAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGEEPSSPTNISSPTSVLYRTQFT 180
           TYDTAEEAAMVYDSAA+KL+GP ALTNFPTH PPP TG+EPSSPTNISSPTSVLYRTQFT
Sbjct: 121 TYDTAEEAAMVYDSAALKLRGPAALTNFPTHTPPPSTGDEPSSPTNISSPTSVLYRTQFT 180

Query: 181 ECSPSNRATETGCAVDESPVVDCPFSDDIFKSILFETPLFSEYQSTLIPEIPWIGGVSGA 240
           ECS S R      AV++SPVVDCPFSDDIFKS + E+PLF EYQSTLI E PWI    GA
Sbjct: 181 ECSSSYR------AVNDSPVVDCPFSDDIFKSSVLESPLFPEYQSTLITEAPWIDADGGA 240

Query: 241 GSGDLLAAAGSDERVEDHDYFEEILMGSDPLVVL 275
            S DL+AAAGS E VEDHDYFEEILMGSDPLVVL
Sbjct: 241 RSSDLVAAAGSVEIVEDHDYFEEILMGSDPLVVL 268

[Close]
BLAST of Lsi09G000420 vs. NCBI nr
Match: gi|449456486|ref|XP_004145980.1| (PREDICTED: ethylene-responsive transcription factor CRF2-like [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 3.2e-107
Identity = 214/278 (76.98%), Postives = 230/278 (82.73%), Query Frame = 1 

Query: 1   MEVPNMICRKPMSEPPGNLAGRSFTGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRY 60
           MEVP ++ RKP+SEP G    RS TGSRIVRISM DPDATDSSSSDED +N+  RRVKRY
Sbjct: 1   MEVPTILRRKPISEPHG----RSSTGSRIVRISMADPDATDSSSSDEDTLNYTSRRVKRY 60

Query: 61  EVEFTIGRAAGGGGGGSRKLKRKRK--VMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLW 120
           E+EF+IG A  G G G RKLKRKRK   +GN+ KFRGVR+RPWGKWAAEIRDS  RVRLW
Sbjct: 61  EIEFSIGMAGDGDGCGDRKLKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDSGSRVRLW 120

Query: 121 LGTYDTAEEAAMVYDSAAVKLQGPGALTNFPTHPPPPFTGEEPSSPTNISSPTSVLYRTQ 180
           LGTYDTAEEAAMVYDSAA+KL+GP ALTNFPTHPPPP TG+EPSSPTNISSPTSVL+RT 
Sbjct: 121 LGTYDTAEEAAMVYDSAALKLRGPAALTNFPTHPPPPSTGQEPSSPTNISSPTSVLHRTH 180

Query: 181 FTECSPSNRATETGCAVDESPVVD-CPFSDDIFKSILFETPLFSEYQSTLIPEIPWIGGV 240
           FTECS S R      AV ESPVVD CPFSDDIFKSIL E+PLF EYQSTLI E PWI   
Sbjct: 181 FTECSSSYR------AVIESPVVDYCPFSDDIFKSILLESPLFPEYQSTLITEAPWIDAG 240

Query: 241 SGAGSGDL-LAAAGSDERVEDHDYFEEILMGSDPLVVL 275
            GA SGDL +AAAGSDERVEDHD FEEILMGSDPLVVL
Sbjct: 241 GGARSGDLVVAAAGSDERVEDHDCFEEILMGSDPLVVL 268

[Close]
BLAST of Lsi09G000420 vs. NCBI nr
Match: gi|225462703|ref|XP_002267400.1| (PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis vinifera])

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40
Identity = 111/199 (55.78%), Postives = 127/199 (63.82%), Query Frame = 1 

Query: 28  RIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTI-----------GRAAGGGGGG 87
           R+VRIS+TDPDATDSSS +ED + F R+RVKRY  E  I           GR  G G G 
Sbjct: 37  RVVRISVTDPDATDSSSDEEDEL-FSRQRVKRYTNEINIATVSKSIAPVAGRKRGAGAGE 96

Query: 88  SRKLKRKRKVMG--NMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDS 147
               +R  KV    N RKFRGVRQRPWGKWAAEIRD +RRVRLWLGTYDTAEEAAMVYD+
Sbjct: 97  MAPCRRPMKVAAPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDN 156

Query: 148 AAVKLQGPGALTNFPTHPPPP--------FTGEEPSSPT-NISSPTSVL-YRTQFT---E 201
           AA+KL+GP ALTNF T PPPP         +G E    + N+SSPTSVL +RT  +   E
Sbjct: 157 AAIKLRGPDALTNFVTPPPPPKPEINLTAVSGYESGDESRNLSSPTSVLHFRTHSSSTDE 216

[Close]
BLAST of Lsi09G000420 vs. NCBI nr
Match: gi|356507594|ref|XP_003522549.1| (PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Glycine max])

HSP 1 Score: 166.8 bits (421), Expect = 5.4e-38
Identity = 129/309 (41.75%), Postives = 164/309 (53.07%), Query Frame = 1 

Query: 25  TGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGGGGGSRKLKRKR 84
           T  RIVRIS TDPDATDSSS DE+    +R+R+KRY  +  I  AA        K+ RKR
Sbjct: 34  TERRIVRISYTDPDATDSSS-DEEGFPLVRKRMKRYVNQIEIETAA-------EKVVRKR 93

Query: 85  KV---------MGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSA 144
                      + + +KFRGVRQRPWGKWAAEIRD +RRVRLWLGTYDTAEEAAMVYD+A
Sbjct: 94  PAGEPCRRPAKLHSGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNA 153

Query: 145 AVKLQGPGALTNFPTHPPPPFTGEEPSSPT----------------------NISSPTSV 204
           A++L+GP ALTNF T P      E PS  T                      N+SSPTSV
Sbjct: 154 AIRLRGPDALTNFLTPP----QRESPSQATTVAVTEEASGSGYDSGDDHCQHNLSSPTSV 213

Query: 205 LYRTQFTECSPSNRATETGC-------AVDESPVVDCPFSDDIFKSILFETP-----LFS 264
           L+    +E    +      C       A+D  P+   P  D++F    FETP     LF 
Sbjct: 214 LHFRSNSESDQKSEQVLRECEGEGEFLALDNMPL---PAWDEVFN---FETPEYPPLLFQ 273

Query: 265 E------YQSTLIPE-IPWIGGVSGAGSGDLLAAAGSD---------ERVEDHDYFEEIL 275
           E      YQS ++ E +P+      + S  +LA +  D            +  D+F++IL
Sbjct: 274 EGNFLHDYQSQMLGETVPFSSDQGFSDSSIVLADSLIDFDKACPPPSTLCQVDDFFQDIL 324

[Close]
BLAST of Lsi09G000420 vs. NCBI nr
Match: gi|1012355086|gb|KYP66273.1| (Ethylene-responsive transcription factor CRF4 [Cajanus cajan])

HSP 1 Score: 164.1 bits (414), Expect = 3.5e-37
Identity = 127/303 (41.91%), Postives = 162/303 (53.47%), Query Frame = 1 

Query: 23  SFTGSRIVRISMTDPDATDSSSSDEDAVNFMRRRVKRYEVEFTIGRAAGGG----GGGSR 82
           S T SRIVRIS TDPDATDSSS DE     +R R+KR+  +  I  AA          + 
Sbjct: 21  SQTNSRIVRISYTDPDATDSSSDDE-GTPVLRHRMKRFVNQIQIQTAASNSRKRPAADTS 80

Query: 83  KLKRKRKVMGNMRKFRGVRQRPWGKWAAEIRDSSRRVRLWLGTYDTAEEAAMVYDSAAVK 142
             +R+ K+ G  +KFRGVRQRPWGKWAAEIRD  R+VRLWLGTYDTAEEAAMVYD+AA++
Sbjct: 81  SCRRQVKLHGG-KKFRGVRQRPWGKWAAEIRDPGRKVRLWLGTYDTAEEAAMVYDNAAIR 140

Query: 143 LQGPGALTNFPTHPPPPFTG-------EEPS------------SPTNISSPTSVLY---- 202
           L+GP ALTNF T P     G       EE S               N+SSPTSVL+    
Sbjct: 141 LRGPDALTNFVTAPAREAAGMKMGAVKEEASGCGYEWSEDNCEEQHNLSSPTSVLHFRSE 200

Query: 203 -RTQFTECSPSNRATETGCAVDES----PVVDCPFSDDIFKSILFETPLFSEYQSTLIPE 262
            R++  +C      TE     DE+     V + P  DD+F     + PL  +    L P+
Sbjct: 201 ERSESEKCEQGEGETE-ATLFDETGEFFSVDNMPAWDDVFNFEAPQYPLLFQDDEPLHPD 260

Query: 263 -------IPWIGGVSGAGSGDLLA----------AAGSDERVEDHDYFEEILM--GSDPL 275
                  +P+    +   S  LLA          +  S  +++ +DYF++IL   GSDPL
Sbjct: 261 SHLLDQTLPFSPEQAFTHSSILLADSLIDFDKACSPSSTSQLDPYDYFQDILFASGSDPL 320

The following BLAST results are available for this feature:
BLAST of Lsi09G000420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CRF1_ARATH2.8e-3440.21Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
CRF2_ARATH4.0e-3339.71Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF4_ARATH2.2e-3148.37Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE... [more]
CRF3_ARATH6.0e-2939.17Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
PTI6_SOLLC7.3e-2747.27Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicu... [more]
BLAST of Lsi09G000420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJI1_CUCSA2.2e-10776.98Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139630 PE=4 SV=1[more]
A5B445_VITVI1.1e-4055.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02400 PE=4 SV=... [more]
I1JYV5_SOYBN3.8e-3841.75AP2-EREBP transcription factor OS=Glycine max GN=Glyma04g41740.1 PE=2 SV=1[more]
A0A151TGX6_CAJCA2.4e-3741.91Ethylene-responsive transcription factor CRF4 OS=Cajanus cajan GN=KK1_012560 PE=... [more]
A0A0A0LB30_CUCSA7.1e-3747.58Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357110 PE=4 SV=1[more]
BLAST of Lsi09G000420 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G11140.11.6e-3540.21 cytokinin response factor 1[more]
AT4G23750.12.2e-3439.71 cytokinin response factor 2[more]
AT4G27950.11.2e-3248.37 cytokinin response factor 4[more]
AT5G53290.13.4e-3039.17 cytokinin response factor 3[more]
AT3G61630.17.0e-2843.56 cytokinin response factor 6[more]
BLAST of Lsi09G000420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074380|ref|XP_008437573.1|3.9e-11377.37PREDICTED: ethylene-responsive transcription factor CRF1-like [Cucumis melo][more]
gi|449456486|ref|XP_004145980.1|3.2e-10776.98PREDICTED: ethylene-responsive transcription factor CRF2-like [Cucumis sativus][more]
gi|225462703|ref|XP_002267400.1|1.5e-4055.78PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis vinifera][more]
gi|356507594|ref|XP_003522549.1|5.4e-3841.75PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Glyci... [more]
gi|1012355086|gb|KYP66273.1|3.5e-3741.91Ethylene-responsive transcription factor CRF4 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR017392AP2/ERF-transcript_factor
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G000420.1Lsi09G000420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 115..131
score: 2.6E-10coord: 93..104
score: 2.6
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 91..150
score: 2.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 92..141
score: 2.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 92..155
score: 1.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 92..149
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 92..150
score: 6.02
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 28..171
score: 7.7
NoneNo IPR availablePANTHERPTHR31194:SF16SUBFAMILY NOT NAMEDcoord: 28..171
score: 7.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G000420Csa5G139630Cucumber (Chinese Long) v2culsiB322
Lsi09G000420CSPI05G03380Wild cucumber (PI 183967)cpilsiB322
Lsi09G000420Cucsa.201950Cucumber (Gy14) v1cgylsiB347
Lsi09G000420CmaCh02G010990Cucurbita maxima (Rimu)cmalsiB536
Lsi09G000420CmaCh18G012940Cucurbita maxima (Rimu)cmalsiB363
Lsi09G000420CmaCh15G010430Cucurbita maxima (Rimu)cmalsiB262
Lsi09G000420CmaCh16G000780Cucurbita maxima (Rimu)cmalsiB298
Lsi09G000420CmoCh15G011020Cucurbita moschata (Rifu)cmolsiB249
Lsi09G000420CmoCh16G000820Cucurbita moschata (Rifu)cmolsiB286
Lsi09G000420CmoCh18G013230Cucurbita moschata (Rifu)cmolsiB351
Lsi09G000420CmoCh02G011250Cucurbita moschata (Rifu)cmolsiB520
Lsi09G000420Cla004912Watermelon (97103) v1lsiwmB027
Lsi09G000420Cla004223Watermelon (97103) v1lsiwmB023
Lsi09G000420MELO3C005867Melon (DHL92) v3.5.1lsimeB012
Lsi09G000420MELO3C006973Melon (DHL92) v3.5.1lsimeB035
Lsi09G000420ClCG01G000610Watermelon (Charleston Gray)lsiwcgB008
Lsi09G000420ClCG05G008650Watermelon (Charleston Gray)lsiwcgB021
Lsi09G000420MELO3C006973.2Melon (DHL92) v3.6.1lsimedB039
Lsi09G000420MELO3C005867.2Melon (DHL92) v3.6.1lsimedB012
Lsi09G000420Cla97C01G000670Watermelon (97103) v2lsiwmbB007
Lsi09G000420Cla97C05G090810Watermelon (97103) v2lsiwmbB019
Lsi09G000420Bhi01G001062Wax gourdlsiwgoB045
Lsi09G000420Bhi12G000538Wax gourdlsiwgoB024
Lsi09G000420Cp4.1LG05g06240Cucurbita pepo (Zucchini)cpelsiB579
Lsi09G000420Cp4.1LG13g03010Cucurbita pepo (Zucchini)cpelsiB134
Lsi09G000420CsGy3G008400Cucumber (Gy14) v2cgyblsiB137
Lsi09G000420CsGy5G000620Cucumber (Gy14) v2cgyblsiB294
Lsi09G000420Carg26221Silver-seed gourdcarlsiB276
Lsi09G000420Carg14033Silver-seed gourdcarlsiB457
Lsi09G000420Carg20360Silver-seed gourdcarlsiB487
Lsi09G000420Carg15088Silver-seed gourdcarlsiB902
Lsi09G000420CsaV3_5G000710Cucumber (Chinese Long) v3cuclsiB345
Lsi09G000420CsaV3_4G006370Cucumber (Chinese Long) v3cuclsiB268
Lsi09G000420CsaV3_3G008400Cucumber (Chinese Long) v3cuclsiB164
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi09G000420Lsi05G000690Bottle gourd (USVL1VR-Ls)lsilsiB013
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G000420Bottle gourd (USVL1VR-Ls)lsilsiB014
Lsi09G000420Cucumber (Gy14) v1cgylsiB413
Lsi09G000420Cucurbita maxima (Rimu)cmalsiB226
Lsi09G000420Cucurbita moschata (Rifu)cmolsiB214
Lsi09G000420Cucurbita pepo (Zucchini)cpelsiB019
Lsi09G000420Cucurbita pepo (Zucchini)cpelsiB163
Lsi09G000420Cucurbita pepo (Zucchini)cpelsiB486
Lsi09G000420Wild cucumber (PI 183967)cpilsiB150
Lsi09G000420Cucumber (Chinese Long) v2culsiB151
Lsi09G000420Melon (DHL92) v3.5.1lsimeB031
Lsi09G000420Watermelon (Charleston Gray)lsiwcgB018
Lsi09G000420Watermelon (97103) v1lsiwmB018
Lsi09G000420Melon (DHL92) v3.6.1lsimedB033