CmoCh15G011020 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G011020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor, putative
LocationCmo_Chr15 : 7395292 .. 7396083 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCCGACCATTCTTCGGAAACCCGGAAACTTCGCCGGTCGGACCAACGTAGGTTCGAGAATTGTTCGGATTTCAATGACCGACCCGGACGCTACGGACTCGTCATCCAGTGACGAAGATGCGGTGAATTTCACGCGCCGCCGTGTCAAGCGGTATGTTGGCGAGATCACCATCGGCACGGCGGCGGGCGAGGGTGGCCGGAAGAATAGAAAGAAGAGGAAGATGGCGGGTAACGTGAGGAAGTTTCGCGGCGTCCGGCGGCGGCCGTGGGGGAAATGGGCGGCCGAGATACGAGACTCCGACCGCCGTGTACGGATGTGGTTAGGGACTTACGACACAGCAGAGGAGGCCGCTATAGCGTACGACAGCGCTGCCGTGAAGCTCCGAGGACCAACTGCTTTAACCAACTTTCCCACTCCGCCGCCGCCATTTTCTTGCAACGACCCATCGTCTCCGACAAATCTCTCTTCTCCGACATCGGTCCTCCATTACAGAACCCACCTCGCCGAATGCTTGCCGTCGGACCGGGCCACCGTAAACGGCGGCGGCGCCGCCGACGTATCTCCGGTAGTCGATTTTCTCTTCTCCGACGACATATTCAAATCGATTATGTTGGAACCGTCTTTTTTTCTCGAGTACGAAACAAGTCCCATACCGGAAACTCCATGGGCCGGCGGCGGCGGCTCGGGGGAAACGGTGGGAGCGGCGGAGTGCAATAAAAAAGTAGAAGAAGATGATTATTTTGAAGAAATTTTGATGGGGTCGGATCCTTTGGTGGTCCTATGA

mRNA sequence

ATGGAAGCTCCGACCATTCTTCGGAAACCCGGAAACTTCGCCGGTCGGACCAACGTAGGTTCGAGAATTGTTCGGATTTCAATGACCGACCCGGACGCTACGGACTCGTCATCCAGTGACGAAGATGCGGTGAATTTCACGCGCCGCCGTGTCAAGCGGTATGTTGGCGAGATCACCATCGGCACGGCGGCGGGCGAGGGTGGCCGGAAGAATAGAAAGAAGAGGAAGATGGCGGGTAACGTGAGGAAGTTTCGCGGCGTCCGGCGGCGGCCGTGGGGGAAATGGGCGGCCGAGATACGAGACTCCGACCGCCGTGTACGGATGTGGTTAGGGACTTACGACACAGCAGAGGAGGCCGCTATAGCGTACGACAGCGCTGCCGTGAAGCTCCGAGGACCAACTGCTTTAACCAACTTTCCCACTCCGCCGCCGCCATTTTCTTGCAACGACCCATCGTCTCCGACAAATCTCTCTTCTCCGACATCGGTCCTCCATTACAGAACCCACCTCGCCGAATGCTTGCCGTCGGACCGGGCCACCGTAAACGGCGGCGGCGCCGCCGACGTATCTCCGGTAGTCGATTTTCTCTTCTCCGACGACATATTCAAATCGATTATGTTGGAACCGTCTTTTTTTCTCGAGTACGAAACAAGTCCCATACCGGAAACTCCATGGGCCGGCGGCGGCGGCTCGGGGGAAACGGTGGGAGCGGCGGAGTGCAATAAAAAAGTAGAAGAAGATGATTATTTTGAAGAAATTTTGATGGGGTCGGATCCTTTGGTGGTCCTATGA

Coding sequence (CDS)

ATGGAAGCTCCGACCATTCTTCGGAAACCCGGAAACTTCGCCGGTCGGACCAACGTAGGTTCGAGAATTGTTCGGATTTCAATGACCGACCCGGACGCTACGGACTCGTCATCCAGTGACGAAGATGCGGTGAATTTCACGCGCCGCCGTGTCAAGCGGTATGTTGGCGAGATCACCATCGGCACGGCGGCGGGCGAGGGTGGCCGGAAGAATAGAAAGAAGAGGAAGATGGCGGGTAACGTGAGGAAGTTTCGCGGCGTCCGGCGGCGGCCGTGGGGGAAATGGGCGGCCGAGATACGAGACTCCGACCGCCGTGTACGGATGTGGTTAGGGACTTACGACACAGCAGAGGAGGCCGCTATAGCGTACGACAGCGCTGCCGTGAAGCTCCGAGGACCAACTGCTTTAACCAACTTTCCCACTCCGCCGCCGCCATTTTCTTGCAACGACCCATCGTCTCCGACAAATCTCTCTTCTCCGACATCGGTCCTCCATTACAGAACCCACCTCGCCGAATGCTTGCCGTCGGACCGGGCCACCGTAAACGGCGGCGGCGCCGCCGACGTATCTCCGGTAGTCGATTTTCTCTTCTCCGACGACATATTCAAATCGATTATGTTGGAACCGTCTTTTTTTCTCGAGTACGAAACAAGTCCCATACCGGAAACTCCATGGGCCGGCGGCGGCGGCTCGGGGGAAACGGTGGGAGCGGCGGAGTGCAATAAAAAAGTAGAAGAAGATGATTATTTTGAAGAAATTTTGATGGGGTCGGATCCTTTGGTGGTCCTATGA
Homology
[Close]
BLAST of CmoCh15G011020 vs. Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-33
Identity = 116/290 (40.00%), Postives = 154/290 (53.10%), Query Frame = 1 

Query: 2   EAPTILRK---PGNFAGRTNV--GSRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVG 61
           E  T++RK     +   +T+V   +R+VR+SMTD DATD SSSDE+   F RRRVKR + 
Sbjct: 16  EHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATD-SSSDEEEFLFPRRRVKRLIN 75

Query: 62  EITIGTAAGEGG------RKNRK---------KRKMAG-NVRKFRGVRRRPWGKWAAEIR 121
           EI +  ++   G       K+RK         K  ++G N +K+RGVR+RPWGKWAAEIR
Sbjct: 76  EIRVEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIR 135

Query: 122 DSDRRVRMWLGTYDTAEEAAIAYDSAAVKLRGPTALTNFPTPPPPFSC----NDPSS--- 181
           D ++R R+WLGT+ TAEEAAI YD+AA+KLRGP ALTNF   P P        +P S   
Sbjct: 136 DPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMS 195

Query: 182 ---------PTNLSSPTSVLHYRTHLAECLPSDRATVNGGGAADVSPVVDFLFSDDIFKS 241
                      +LSSPTSVL+Y+T+++E                  P+      D + K 
Sbjct: 196 VSISESMDDSQHLSSPTSVLNYQTYVSE-----------------EPI------DSLIKP 255

Query: 242 IMLEPSFFLEYETSPIPETPWAGGGGSGETVGAAECNKKVEEDDYFEEIL 255
           +  E   FLE E  PI    W  G G+  T   +        D+YF E L
Sbjct: 256 VKQE---FLEPEQEPI---SWHLGEGNTNTNDDSFPLDITFLDNYFNESL 275

[Close]
BLAST of CmoCh15G011020 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-33
Identity = 112/288 (38.89%), Postives = 149/288 (51.74%), Query Frame = 1 

Query: 22  RIVRISMTDPDATDSSSSDEDAVNFT-----RRRVKRYVGEITIGTAAGEGGRKNRKKRK 81
           RI+RIS+TDP ATDSSS +E+ V+F      RRRVK+YV E+ + +   +  +  +KKRK
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKRK 70

Query: 82  ---------MAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIAYDSAA 141
                    +    RKFRGVR+RPWGKWAAEIRD  RRVR+WLGT+DTAEEAAI YD+AA
Sbjct: 71  KRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAA 130

Query: 142 VKLRGPTALTNFPTPPPPFSCNDPSSPTN------------LSSPTSVLH---------- 201
           ++LRGP A  NFP PP   +  + S+               L SP SVL           
Sbjct: 131 IQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPFSGESTAV 190

Query: 202 ----YRTHLAECLPSDRATVNGGGAADVSPVVDFLFSDDI---FKSIMLEPSFFLEYETS 261
                    AE +     + NG   +D S     LFSDD    F + M E      +   
Sbjct: 191 KEEFVGVSTAEIVVKKEPSFNG---SDFSAP---LFSDDDVFGFSTSMSE-----SFGGD 250

Query: 262 PIPETPWAG-GGGSGETVGAAECNKKVEEDDYFEEI--LMGSDPLVVL 264
              +  +A    GSG   G+         +D+F++I  L GSDP++ +
Sbjct: 251 LFGDNLFADMSFGSGFGFGSGSGFSSWHVEDHFQDIGDLFGSDPVLTV 287

[Close]
BLAST of CmoCh15G011020 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30
Identity = 114/314 (36.31%), Postives = 156/314 (49.68%), Query Frame = 1 

Query: 21  SRIVRISMTDPDATDSSSSDEDAVN----FTRRRVKRYVGEITIGTAA---GEGGRKNRK 80
           +RI+RIS+TDPDATDSSS DE+  +      RRRVK++V E+ + + A   G  G+   K
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 81  KRKMAG------------------NVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDT 140
           KR+                       +KFRGVR+RPWGKWAAEIRD  +RVR+WLGTY+T
Sbjct: 94  KRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153

Query: 141 AEEAAIAYDSAAVKLRGPTALTNF---PT------PPPPFSCNDPSSPTNLSSPT---SV 200
           AEEAA+ YD+AA++LRGP ALTNF   PT       PPP          N S  +   S 
Sbjct: 154 AEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASS 213

Query: 201 LHYRTHLAECLPSDRATVNGGGAAD------VSPV-------------VDFLFSDDIFKS 260
              R+   +CL S  + +    A D       SPV             V   FSD  F +
Sbjct: 214 SISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSD--FSA 273

Query: 261 IMLEPSFFLEYETSPIPETPWAGGGGSGETVGAAE-CN------------KKVEEDDYFE 264
            +       ++ +S +P+  + GG   GE +  A+ C                  +D+F+
Sbjct: 274 PLFSDDDVFDFRSSVVPD--YLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHMEDHFQ 333

[Close]
BLAST of CmoCh15G011020 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.8e-30
Identity = 87/197 (44.16%), Postives = 111/197 (56.35%), Query Frame = 1 

Query: 24  VRISMTDPDATDSSS-SDEDAVNFTRRRVKRYVGEITIGTAAGE----GGRKNRK----- 83
           V I  TDPDATDSSS  DE+   F RRRVKR+V EIT+  +          K+RK     
Sbjct: 39  VSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSS 98

Query: 84  ----------------KRKMAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAE 143
                           K  ++G ++KFRGVR+RPWGKWAAEIRD ++R R+WLGT++TAE
Sbjct: 99  SDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAE 158

Query: 144 EAAIAYDSAAVKLRGPTALTNFPTPP---------------PPFSCNDPSSPT------- 169
           EAA+ YD+AA++LRGP ALTNF  PP                P     P+  T       
Sbjct: 159 EAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKPVIMTTPTPTTSSSESTE 218

[Close]
BLAST of CmoCh15G011020 vs. Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 87/177 (49.15%), Postives = 108/177 (61.02%), Query Frame = 1 

Query: 17  TNVGSRIVRISMTDPDATDSSSSDEDAVNFTR-RRVKRYV-------GEITIGTAAGEGG 76
           +N   R+VRI++TDP ATDSSS D+D  N T   RVKRYV       GE +  TAA +G 
Sbjct: 24  SNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIRFCQGESSSSTAARKGK 83

Query: 77  RKNRKKRKMAGNV------RKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIA 136
            K  +   +  +V      +K+RGVR+RPWGK+AAEIRD   R R+WLGT+ TAEEAAIA
Sbjct: 84  HKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIA 143

Query: 137 YDSAAVKLRGPTALTNFPTPPPPFSCND----------PSSPTNLSSPTSVLHYRTH 170
           YD AA+ L+GP ALTNF TPP P    D            S  +L SPTSVL +  +
Sbjct: 144 YDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSRQSLHSPTSVLRFNVN 200

[Close]
BLAST of CmoCh15G011020 vs. TrEMBL
Match: A0A0A0KJI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139630 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.0e-80
Identity = 178/276 (64.49%), Postives = 204/276 (73.91%), Query Frame = 1 

Query: 1   MEAPTILRKP--GNFAGRTNVGSRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEI 60
           ME PTILR+       GR++ GSRIVRISM DPDATDSSSSDED +N+T RRVKRY  E 
Sbjct: 1   MEVPTILRRKPISEPHGRSSTGSRIVRISMADPDATDSSSSDEDTLNYTSRRVKRYEIEF 60

Query: 61  TIGTAA-----GEGGRKNRKKRKMAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTY 120
           +IG A      G+   K ++KRK  GNV KFRGVRRRPWGKWAAEIRDS  RVR+WLGTY
Sbjct: 61  SIGMAGDGDGCGDRKLKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDSGSRVRLWLGTY 120

Query: 121 DTAEEAAIAYDSAAVKLRGPTALTNFPT-PPPPFSCNDPSSPTNLSSPTSVLHYRTHLAE 180
           DTAEEAA+ YDSAA+KLRGP ALTNFPT PPPP +  +PSSPTN+SSPTSVLH RTH  E
Sbjct: 121 DTAEEAAMVYDSAALKLRGPAALTNFPTHPPPPSTGQEPSSPTNISSPTSVLH-RTHFTE 180

Query: 181 CLPSDRATVNGGGAADVSPVVDFL-FSDDIFKSIMLEPSFFLEYETSPIPETPW--AGGG 240
           C  S RA +        SPVVD+  FSDDIFKSI+LE   F EY+++ I E PW  AGGG
Sbjct: 181 CSSSYRAVIE-------SPVVDYCPFSDDIFKSILLESPLFPEYQSTLITEAPWIDAGGG 240

Query: 241 G-SGE-TVGAAECNKKVEEDDYFEEILMGSDPLVVL 264
             SG+  V AA  +++VE+ D FEEILMGSDPLVVL
Sbjct: 241 ARSGDLVVAAAGSDERVEDHDCFEEILMGSDPLVVL 268

[Close]
BLAST of CmoCh15G011020 vs. TrEMBL
Match: A5B445_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02400 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 109/189 (57.67%), Postives = 127/189 (67.20%), Query Frame = 1 

Query: 22  RIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITIGTA----AGEGGRKN------ 81
           R+VRIS+TDPDATDSSS +ED + F+R+RVKRY  EI I T     A   GRK       
Sbjct: 37  RVVRISVTDPDATDSSSDEEDEL-FSRQRVKRYTNEINIATVSKSIAPVAGRKRGAGAGE 96

Query: 82  ----RKKRKMAG--NVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIAYDS 141
               R+  K+A   N RKFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEAA+ YD+
Sbjct: 97  MAPCRRPMKVAAPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDN 156

Query: 142 AAVKLRGPTALTNFPTPPPP------------FSCNDPSSPTNLSSPTSVLHYRTHLA-- 180
           AA+KLRGP ALTNF TPPPP            +   D S   NLSSPTSVLH+RTH +  
Sbjct: 157 AAIKLRGPDALTNFVTPPPPPKPEINLTAVSGYESGDES--RNLSSPTSVLHFRTHSSST 216

[Close]
BLAST of CmoCh15G011020 vs. TrEMBL
Match: A0A0A0LB30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357110 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.5e-41
Identity = 132/306 (43.14%), Postives = 161/306 (52.61%), Query Frame = 1 

Query: 21  SRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITIGTAAGEGGRKNRKKRKMAG- 80
           SR+VRIS+TDPDATDSSS ++D   F R+RVK+Y+ EI I +        + +KR     
Sbjct: 31  SRVVRISVTDPDATDSSSDEDDF--FERQRVKKYINEIKIQSGCRNNLLPSCRKRPAGDR 90

Query: 81  -------------NVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIAYDSA 140
                        N +KFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEAA+ YD+A
Sbjct: 91  SEFRRQGKVVPPTNGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNA 150

Query: 141 AVKLRGPTALTNFPTPPP-PF------SCNDPS----------SPTNLSSPTSVLHYRTH 200
           A++LRGP ALTNF TPPP P       + N PS             NLSSPTSVLH+RT 
Sbjct: 151 AIQLRGPDALTNFATPPPVPMPEKEVETANIPSVSGSYYDSSEESHNLSSPTSVLHFRT- 210

Query: 201 LAECLPSDRATVNGGGAADV-SPVVDFLFSDDIFKSIMLEPSFFLEYETS---------- 260
                PS   +     + D+  P   F+  DD F     E SF  EY T           
Sbjct: 211 -----PSPEESEKPPKSDDLQKPPAPFV--DDQFHECQGETSFTEEYHTEFPRFDYDFKF 270

Query: 261 PIPETP--------------WAGGGGS-----GETVGAAECNKKVEE--DDYFEEILMGS 264
           P PE P              W            E  G+   +  + +  DDYF++ILMGS
Sbjct: 271 PSPEAPIFLDDQPLFFEDSIWNDDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDILMGS 326

[Close]
BLAST of CmoCh15G011020 vs. TrEMBL
Match: A0A061G219_THECC (Ethylene-responsive transcription factor, putative OS=Theobroma cacao GN=TCM_015336 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.6e-40
Identity = 135/323 (41.80%), Postives = 163/323 (50.46%), Query Frame = 1 

Query: 22  RIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITI-----GTAAGEGGRKNRKKRK 81
           RIVR+S+TDPDATDSSS DE+A  F R+RVKRYV EI I      TA       NRK+  
Sbjct: 48  RIVRVSVTDPDATDSSS-DEEADFFGRQRVKRYVNEINIEATCKNTATTTISNTNRKRTA 107

Query: 82  MA-----------------GNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEA 141
            A                 GN RKFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEA
Sbjct: 108 AAADVTTACRRPLKLSSSNGNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEA 167

Query: 142 AIAYDSAAVKLRGPTALTNFPTPPPPFSCNDP---------------SSPTNLSSPTSVL 201
           A+ YD+AA+KLRGP ALTNF TPP   +   P                S  NLSSPTSVL
Sbjct: 168 AMVYDNAAIKLRGPDALTNFVTPPAKENKEKPEIINVASVSGYESGDESSHNLSSPTSVL 227

Query: 202 HYRTHLAE--------------------------CLPSDRATVNGGGAADVSP---VVDF 261
           ++RT  +E                           +PS+     G    D S     +DF
Sbjct: 228 NFRTQSSEETAVEPEKPVQELQEEESKPPPVQEQVVPSECQGETGTNLPDDSGDYLPLDF 287

Query: 262 LFSDDIFK-------------SIMLEPSFFLEYETSPIPETPWAGGGGSGETVGAAECNK 264
            F D+ F              +I+ E S F E  ++ + +TP   G  S  ++       
Sbjct: 288 PFLDEFFNIPVPGLSLFDDTATILPESSVFSEDFSNMLLDTPQDFGCSSSSSIS------ 347

[Close]
BLAST of CmoCh15G011020 vs. TrEMBL
Match: A0A0D2RZF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G200400 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.7e-38
Identity = 100/187 (53.48%), Postives = 119/187 (63.64%), Query Frame = 1 

Query: 21  SRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITIGTA----------------- 80
           ++IVR+S+TDPDATDSSS +ED     RRRVKRYV EI+I  A                 
Sbjct: 29  TKIVRVSVTDPDATDSSSDEEDYFFVPRRRVKRYVNEISIEPAPCKSTASTTVPNNNSNR 88

Query: 81  ---AGEGGRKNRKKRKMAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAA 140
              A +    NR+  K++ + RKFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEAA
Sbjct: 89  KRTATDVADSNRRPLKLSSSGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAA 148

Query: 141 IAYDSAAVKLRGPTALTNFPTPP------PPFSCNDPS---------SPTNLSSPTSVLH 173
           + YD+AA+KLRGP ALTNF TPP       P + N PS         SP NLSSPTSV +
Sbjct: 149 MVYDNAAIKLRGPDALTNFITPPAKESIGKPDNINVPSVSGYQSGDDSPRNLSSPTSVFN 208

[Close]
BLAST of CmoCh15G011020 vs. TAIR10
Match: AT4G27950.1 (AT4G27950.1 cytokinin response factor 4)

HSP 1 Score: 145.2 bits (365), Expect = 5.7e-35
Identity = 116/290 (40.00%), Postives = 154/290 (53.10%), Query Frame = 1 

Query: 2   EAPTILRK---PGNFAGRTNV--GSRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVG 61
           E  T++RK     +   +T+V   +R+VR+SMTD DATD SSSDE+   F RRRVKR + 
Sbjct: 16  EHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATD-SSSDEEEFLFPRRRVKRLIN 75

Query: 62  EITIGTAAGEGG------RKNRK---------KRKMAG-NVRKFRGVRRRPWGKWAAEIR 121
           EI +  ++   G       K+RK         K  ++G N +K+RGVR+RPWGKWAAEIR
Sbjct: 76  EIRVEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIR 135

Query: 122 DSDRRVRMWLGTYDTAEEAAIAYDSAAVKLRGPTALTNFPTPPPPFSC----NDPSS--- 181
           D ++R R+WLGT+ TAEEAAI YD+AA+KLRGP ALTNF   P P        +P S   
Sbjct: 136 DPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMS 195

Query: 182 ---------PTNLSSPTSVLHYRTHLAECLPSDRATVNGGGAADVSPVVDFLFSDDIFKS 241
                      +LSSPTSVL+Y+T+++E                  P+      D + K 
Sbjct: 196 VSISESMDDSQHLSSPTSVLNYQTYVSE-----------------EPI------DSLIKP 255

Query: 242 IMLEPSFFLEYETSPIPETPWAGGGGSGETVGAAECNKKVEEDDYFEEIL 255
           +  E   FLE E  PI    W  G G+  T   +        D+YF E L
Sbjct: 256 VKQE---FLEPEQEPI---SWHLGEGNTNTNDDSFPLDITFLDNYFNESL 275

[Close]
BLAST of CmoCh15G011020 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 112/288 (38.89%), Postives = 149/288 (51.74%), Query Frame = 1 

Query: 22  RIVRISMTDPDATDSSSSDEDAVNFT-----RRRVKRYVGEITIGTAAGEGGRKNRKKRK 81
           RI+RIS+TDP ATDSSS +E+ V+F      RRRVK+YV E+ + +   +  +  +KKRK
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKRK 70

Query: 82  ---------MAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIAYDSAA 141
                    +    RKFRGVR+RPWGKWAAEIRD  RRVR+WLGT+DTAEEAAI YD+AA
Sbjct: 71  KRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAA 130

Query: 142 VKLRGPTALTNFPTPPPPFSCNDPSSPTN------------LSSPTSVLH---------- 201
           ++LRGP A  NFP PP   +  + S+               L SP SVL           
Sbjct: 131 IQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPFSGESTAV 190

Query: 202 ----YRTHLAECLPSDRATVNGGGAADVSPVVDFLFSDDI---FKSIMLEPSFFLEYETS 261
                    AE +     + NG   +D S     LFSDD    F + M E      +   
Sbjct: 191 KEEFVGVSTAEIVVKKEPSFNG---SDFSAP---LFSDDDVFGFSTSMSE-----SFGGD 250

Query: 262 PIPETPWAG-GGGSGETVGAAECNKKVEEDDYFEEI--LMGSDPLVVL 264
              +  +A    GSG   G+         +D+F++I  L GSDP++ +
Sbjct: 251 LFGDNLFADMSFGSGFGFGSGSGFSSWHVEDHFQDIGDLFGSDPVLTV 287

[Close]
BLAST of CmoCh15G011020 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31
Identity = 114/314 (36.31%), Postives = 156/314 (49.68%), Query Frame = 1 

Query: 21  SRIVRISMTDPDATDSSSSDEDAVN----FTRRRVKRYVGEITIGTAA---GEGGRKNRK 80
           +RI+RIS+TDPDATDSSS DE+  +      RRRVK++V E+ + + A   G  G+   K
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 81  KRKMAG------------------NVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDT 140
           KR+                       +KFRGVR+RPWGKWAAEIRD  +RVR+WLGTY+T
Sbjct: 94  KRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153

Query: 141 AEEAAIAYDSAAVKLRGPTALTNF---PT------PPPPFSCNDPSSPTNLSSPT---SV 200
           AEEAA+ YD+AA++LRGP ALTNF   PT       PPP          N S  +   S 
Sbjct: 154 AEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASS 213

Query: 201 LHYRTHLAECLPSDRATVNGGGAAD------VSPV-------------VDFLFSDDIFKS 260
              R+   +CL S  + +    A D       SPV             V   FSD  F +
Sbjct: 214 SISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSD--FSA 273

Query: 261 IMLEPSFFLEYETSPIPETPWAGGGGSGETVGAAE-CN------------KKVEEDDYFE 264
            +       ++ +S +P+  + GG   GE +  A+ C                  +D+F+
Sbjct: 274 PLFSDDDVFDFRSSVVPD--YLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHMEDHFQ 333

[Close]
BLAST of CmoCh15G011020 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 132.5 bits (332), Expect = 3.8e-31
Identity = 87/197 (44.16%), Postives = 111/197 (56.35%), Query Frame = 1 

Query: 24  VRISMTDPDATDSSS-SDEDAVNFTRRRVKRYVGEITIGTAAGE----GGRKNRK----- 83
           V I  TDPDATDSSS  DE+   F RRRVKR+V EIT+  +          K+RK     
Sbjct: 39  VSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSS 98

Query: 84  ----------------KRKMAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAE 143
                           K  ++G ++KFRGVR+RPWGKWAAEIRD ++R R+WLGT++TAE
Sbjct: 99  SDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAE 158

Query: 144 EAAIAYDSAAVKLRGPTALTNFPTPP---------------PPFSCNDPSSPT------- 169
           EAA+ YD+AA++LRGP ALTNF  PP                P     P+  T       
Sbjct: 159 EAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKPVIMTTPTPTTSSSESTE 218

[Close]
BLAST of CmoCh15G011020 vs. TAIR10
Match: AT3G61630.1 (AT3G61630.1 cytokinin response factor 6)

HSP 1 Score: 131.7 bits (330), Expect = 6.5e-31
Identity = 87/177 (49.15%), Postives = 108/177 (61.02%), Query Frame = 1 

Query: 17  TNVGSRIVRISMTDPDATDSSSSDEDAVNFTR-RRVKRYV-------GEITIGTAAGEGG 76
           +N   R+VRI++TDP ATDSSS D+D  N T   RVKRYV       GE +  TAA +G 
Sbjct: 24  SNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIRFCQGESSSSTAARKGK 83

Query: 77  RKNRKKRKMAGNV------RKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIA 136
            K  +   +  +V      +K+RGVR+RPWGK+AAEIRD   R R+WLGT+ TAEEAAIA
Sbjct: 84  HKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIA 143

Query: 137 YDSAAVKLRGPTALTNFPTPPPPFSCND----------PSSPTNLSSPTSVLHYRTH 170
           YD AA+ L+GP ALTNF TPP P    D            S  +L SPTSVL +  +
Sbjct: 144 YDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSRQSLHSPTSVLRFNVN 200

[Close]
BLAST of CmoCh15G011020 vs. NCBI nr
Match: gi|659074380|ref|XP_008437573.1| (PREDICTED: ethylene-responsive transcription factor CRF1-like [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 5.3e-83
Identity = 179/276 (64.86%), Postives = 205/276 (74.28%), Query Frame = 1 

Query: 1   MEAPTILRK------PGNFAGRTNVGSRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRY 60
           ME  TILR+      PGNF GR++ GSRIVRISMTDPDATDSSSSDED +N+ RRRVKRY
Sbjct: 1   MEVSTILRRKPISEPPGNFHGRSSTGSRIVRISMTDPDATDSSSSDEDTLNYPRRRVKRY 60

Query: 61  VGEITIGTAAGEGG---RKNRKKRKMAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLG 120
             E+++GTA   GG   RK ++KRK  GNV KFRGVRRRPWGKWAAEIRD+ RRVR+WLG
Sbjct: 61  EIELSVGTAGDGGGCGARKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDTGRRVRLWLG 120

Query: 121 TYDTAEEAAIAYDSAAVKLRGPTALTNFPT-PPPPFSCNDPSSPTNLSSPTSVLHYRTHL 180
           TYDTAEEAA+ YDSAA+KLRGP ALTNFPT  PPP + ++PSSPTN+SSPTSVL YRT  
Sbjct: 121 TYDTAEEAAMVYDSAALKLRGPAALTNFPTHTPPPSTGDEPSSPTNISSPTSVL-YRTQF 180

Query: 181 AECLPSDRATVNGGGAADVSPVVDFLFSDDIFKSIMLEPSFFLEYETSPIPETPWA---G 240
            EC  S R       A + SPVVD  FSDDIFKS +LE   F EY+++ I E PW    G
Sbjct: 181 TECSSSYR-------AVNDSPVVDCPFSDDIFKSSVLESPLFPEYQSTLITEAPWIDADG 240

Query: 241 GGGSGETVGAAECNKKVEEDDYFEEILMGSDPLVVL 264
           G  S + V AA   + VE+ DYFEEILMGSDPLVVL
Sbjct: 241 GARSSDLVAAAGSVEIVEDHDYFEEILMGSDPLVVL 268

[Close]
BLAST of CmoCh15G011020 vs. NCBI nr
Match: gi|449456486|ref|XP_004145980.1| (PREDICTED: ethylene-responsive transcription factor CRF2-like [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 7.1e-80
Identity = 178/276 (64.49%), Postives = 204/276 (73.91%), Query Frame = 1 

Query: 1   MEAPTILRKP--GNFAGRTNVGSRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEI 60
           ME PTILR+       GR++ GSRIVRISM DPDATDSSSSDED +N+T RRVKRY  E 
Sbjct: 1   MEVPTILRRKPISEPHGRSSTGSRIVRISMADPDATDSSSSDEDTLNYTSRRVKRYEIEF 60

Query: 61  TIGTAA-----GEGGRKNRKKRKMAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTY 120
           +IG A      G+   K ++KRK  GNV KFRGVRRRPWGKWAAEIRDS  RVR+WLGTY
Sbjct: 61  SIGMAGDGDGCGDRKLKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDSGSRVRLWLGTY 120

Query: 121 DTAEEAAIAYDSAAVKLRGPTALTNFPT-PPPPFSCNDPSSPTNLSSPTSVLHYRTHLAE 180
           DTAEEAA+ YDSAA+KLRGP ALTNFPT PPPP +  +PSSPTN+SSPTSVLH RTH  E
Sbjct: 121 DTAEEAAMVYDSAALKLRGPAALTNFPTHPPPPSTGQEPSSPTNISSPTSVLH-RTHFTE 180

Query: 181 CLPSDRATVNGGGAADVSPVVDFL-FSDDIFKSIMLEPSFFLEYETSPIPETPW--AGGG 240
           C  S RA +        SPVVD+  FSDDIFKSI+LE   F EY+++ I E PW  AGGG
Sbjct: 181 CSSSYRAVIE-------SPVVDYCPFSDDIFKSILLESPLFPEYQSTLITEAPWIDAGGG 240

Query: 241 G-SGE-TVGAAECNKKVEEDDYFEEILMGSDPLVVL 264
             SG+  V AA  +++VE+ D FEEILMGSDPLVVL
Sbjct: 241 ARSGDLVVAAAGSDERVEDHDCFEEILMGSDPLVVL 268

[Close]
BLAST of CmoCh15G011020 vs. NCBI nr
Match: gi|225462703|ref|XP_002267400.1| (PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis vinifera])

HSP 1 Score: 177.6 bits (449), Expect = 2.9e-41
Identity = 109/189 (57.67%), Postives = 127/189 (67.20%), Query Frame = 1 

Query: 22  RIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITIGTA----AGEGGRKN------ 81
           R+VRIS+TDPDATDSSS +ED + F+R+RVKRY  EI I T     A   GRK       
Sbjct: 37  RVVRISVTDPDATDSSSDEEDEL-FSRQRVKRYTNEINIATVSKSIAPVAGRKRGAGAGE 96

Query: 82  ----RKKRKMAG--NVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIAYDS 141
               R+  K+A   N RKFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEAA+ YD+
Sbjct: 97  MAPCRRPMKVAAPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDN 156

Query: 142 AAVKLRGPTALTNFPTPPPP------------FSCNDPSSPTNLSSPTSVLHYRTHLA-- 180
           AA+KLRGP ALTNF TPPPP            +   D S   NLSSPTSVLH+RTH +  
Sbjct: 157 AAIKLRGPDALTNFVTPPPPPKPEINLTAVSGYESGDES--RNLSSPTSVLHFRTHSSST 216

[Close]
BLAST of CmoCh15G011020 vs. NCBI nr
Match: gi|449463464|ref|XP_004149454.1| (PREDICTED: ethylene-responsive transcription factor CRF4 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 6.5e-41
Identity = 132/306 (43.14%), Postives = 161/306 (52.61%), Query Frame = 1 

Query: 21  SRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITIGTAAGEGGRKNRKKRKMAG- 80
           SR+VRIS+TDPDATDSSS ++D   F R+RVK+Y+ EI I +        + +KR     
Sbjct: 31  SRVVRISVTDPDATDSSSDEDDF--FERQRVKKYINEIKIQSGCRNNLLPSCRKRPAGDR 90

Query: 81  -------------NVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEAAIAYDSA 140
                        N +KFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEAA+ YD+A
Sbjct: 91  SEFRRQGKVVPPTNGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNA 150

Query: 141 AVKLRGPTALTNFPTPPP-PF------SCNDPS----------SPTNLSSPTSVLHYRTH 200
           A++LRGP ALTNF TPPP P       + N PS             NLSSPTSVLH+RT 
Sbjct: 151 AIQLRGPDALTNFATPPPVPMPEKEVETANIPSVSGSYYDSSEESHNLSSPTSVLHFRT- 210

Query: 201 LAECLPSDRATVNGGGAADV-SPVVDFLFSDDIFKSIMLEPSFFLEYETS---------- 260
                PS   +     + D+  P   F+  DD F     E SF  EY T           
Sbjct: 211 -----PSPEESEKPPKSDDLQKPPAPFV--DDQFHECQGETSFTEEYHTEFPRFDYDFKF 270

Query: 261 PIPETP--------------WAGGGGS-----GETVGAAECNKKVEE--DDYFEEILMGS 264
           P PE P              W            E  G+   +  + +  DDYF++ILMGS
Sbjct: 271 PSPEAPIFLDDQPLFFEDSIWNDDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDILMGS 326

[Close]
BLAST of CmoCh15G011020 vs. NCBI nr
Match: gi|590673613|ref|XP_007038942.1| (Ethylene-responsive transcription factor, putative [Theobroma cacao])

HSP 1 Score: 172.6 bits (436), Expect = 9.4e-40
Identity = 135/323 (41.80%), Postives = 163/323 (50.46%), Query Frame = 1 

Query: 22  RIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEITI-----GTAAGEGGRKNRKKRK 81
           RIVR+S+TDPDATDSSS DE+A  F R+RVKRYV EI I      TA       NRK+  
Sbjct: 48  RIVRVSVTDPDATDSSS-DEEADFFGRQRVKRYVNEINIEATCKNTATTTISNTNRKRTA 107

Query: 82  MA-----------------GNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTYDTAEEA 141
            A                 GN RKFRGVR+RPWGKWAAEIRD  RRVR+WLGTYDTAEEA
Sbjct: 108 AAADVTTACRRPLKLSSSNGNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEA 167

Query: 142 AIAYDSAAVKLRGPTALTNFPTPPPPFSCNDP---------------SSPTNLSSPTSVL 201
           A+ YD+AA+KLRGP ALTNF TPP   +   P                S  NLSSPTSVL
Sbjct: 168 AMVYDNAAIKLRGPDALTNFVTPPAKENKEKPEIINVASVSGYESGDESSHNLSSPTSVL 227

Query: 202 HYRTHLAE--------------------------CLPSDRATVNGGGAADVSP---VVDF 261
           ++RT  +E                           +PS+     G    D S     +DF
Sbjct: 228 NFRTQSSEETAVEPEKPVQELQEEESKPPPVQEQVVPSECQGETGTNLPDDSGDYLPLDF 287

Query: 262 LFSDDIFK-------------SIMLEPSFFLEYETSPIPETPWAGGGGSGETVGAAECNK 264
            F D+ F              +I+ E S F E  ++ + +TP   G  S  ++       
Sbjct: 288 PFLDEFFNIPVPGLSLFDDTATILPESSVFSEDFSNMLLDTPQDFGCSSSSSIS------ 347

The following BLAST results are available for this feature:
BLAST of CmoCh15G011020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CRF4_ARATH1.0e-3340.00Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE... [more]
CRF1_ARATH2.9e-3338.89Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
CRF2_ARATH1.8e-3036.31Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF3_ARATH6.8e-3044.16Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
CRF6_ARATH1.2e-2949.15Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE... [more]
BLAST of CmoCh15G011020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJI1_CUCSA5.0e-8064.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139630 PE=4 SV=1[more]
A5B445_VITVI2.0e-4157.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02400 PE=4 SV=... [more]
A0A0A0LB30_CUCSA4.5e-4143.14Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357110 PE=4 SV=1[more]
A0A061G219_THECC6.6e-4041.80Ethylene-responsive transcription factor, putative OS=Theobroma cacao GN=TCM_015... [more]
A0A0D2RZF8_GOSRA4.7e-3853.48Uncharacterized protein OS=Gossypium raimondii GN=B456_006G200400 PE=4 SV=1[more]
BLAST of CmoCh15G011020 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27950.15.7e-3540.00 cytokinin response factor 4[more]
AT4G11140.11.7e-3438.89 cytokinin response factor 1[more]
AT4G23750.11.0e-3136.31 cytokinin response factor 2[more]
AT5G53290.13.8e-3144.16 cytokinin response factor 3[more]
AT3G61630.16.5e-3149.15 cytokinin response factor 6[more]
BLAST of CmoCh15G011020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074380|ref|XP_008437573.1|5.3e-8364.86PREDICTED: ethylene-responsive transcription factor CRF1-like [Cucumis melo][more]
gi|449456486|ref|XP_004145980.1|7.1e-8064.49PREDICTED: ethylene-responsive transcription factor CRF2-like [Cucumis sativus][more]
gi|225462703|ref|XP_002267400.1|2.9e-4157.67PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis vinifera][more]
gi|449463464|ref|XP_004149454.1|6.5e-4143.14PREDICTED: ethylene-responsive transcription factor CRF4 [Cucumis sativus][more]
gi|590673613|ref|XP_007038942.1|9.4e-4041.80Ethylene-responsive transcription factor, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G011020.1CmoCh15G011020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 106..122
score: 1.5E-10coord: 84..95
score: 1.5
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 82..140
score: 4.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 83..132
score: 2.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 83..146
score: 7.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 83..140
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 83..141
score: 3.6
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 22..144
score: 2.1
NoneNo IPR availablePANTHERPTHR31194:SF16SUBFAMILY NOT NAMEDcoord: 22..144
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G011020Cucsa.201950Cucumber (Gy14) v1cgycmoB0600
CmoCh15G011020CmaCh15G010430Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G011020CmaCh02G010990Cucurbita maxima (Rimu)cmacmoB584
CmoCh15G011020Cla004912Watermelon (97103) v1cmowmB262
CmoCh15G011020Csa5G139630Cucumber (Chinese Long) v2cmocuB279
CmoCh15G011020MELO3C005867Melon (DHL92) v3.5.1cmomeB246
CmoCh15G011020ClCG01G000610Watermelon (Charleston Gray)cmowcgB243
CmoCh15G011020CSPI05G03380Wild cucumber (PI 183967)cmocpiB288
CmoCh15G011020Lsi09G000420Bottle gourd (USVL1VR-Ls)cmolsiB249
CmoCh15G011020Lsi05G000690Bottle gourd (USVL1VR-Ls)cmolsiB278
CmoCh15G011020Cp4.1LG05g06240Cucurbita pepo (Zucchini)cmocpeB293
CmoCh15G011020Cp4.1LG13g03010Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G011020MELO3C016313.2Melon (DHL92) v3.6.1cmomedB308
CmoCh15G011020MELO3C005867.2Melon (DHL92) v3.6.1cmomedB278
CmoCh15G011020CsaV3_5G000710Cucumber (Chinese Long) v3cmocucB0338
CmoCh15G011020Cla97C05G090810Watermelon (97103) v2cmowmbB289
CmoCh15G011020Cla97C01G000670Watermelon (97103) v2cmowmbB266
CmoCh15G011020Bhi12G000538Wax gourdcmowgoB0371
CmoCh15G011020Bhi01G001062Wax gourdcmowgoB0384
CmoCh15G011020CsGy5G000620Cucumber (Gy14) v2cgybcmoB575
CmoCh15G011020CsGy4G006090Cucumber (Gy14) v2cgybcmoB463
CmoCh15G011020Carg15088Silver-seed gourdcarcmoB1325
CmoCh15G011020Carg20360Silver-seed gourdcarcmoB0729
CmoCh15G011020Carg14033Silver-seed gourdcarcmoB0691
CmoCh15G011020Carg26221Silver-seed gourdcarcmoB0411
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G011020CmoCh16G000820Cucurbita moschata (Rifu)cmocmoB236
CmoCh15G011020CmoCh18G013230Cucurbita moschata (Rifu)cmocmoB243
CmoCh15G011020CmoCh02G011250Cucurbita moschata (Rifu)cmocmoB251
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G011020Cucurbita moschata (Rifu)cmocmoB193
CmoCh15G011020Cucumber (Gy14) v1cgycmoB0703
CmoCh15G011020Cucurbita maxima (Rimu)cmacmoB319
CmoCh15G011020Cucurbita maxima (Rimu)cmacmoB403
CmoCh15G011020Wild cucumber (PI 183967)cmocpiB278
CmoCh15G011020Cucumber (Chinese Long) v2cmocuB271
CmoCh15G011020Watermelon (Charleston Gray)cmowcgB256
CmoCh15G011020Watermelon (97103) v1cmowmB260
CmoCh15G011020Cucurbita pepo (Zucchini)cmocpeB270
CmoCh15G011020Cucurbita pepo (Zucchini)cmocpeB264