Lsi05G000690 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G000690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEthylene-responsive transcription factor, putative
Locationchr05 : 1432708 .. 1433688 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATACTCTGTTTTCCCCTGTTAAATTCACTGAGCACCGAAACTTCACCAACAAATTTTCCGCCAAAAAACATCACCACTCAGAAAGTAGAGTCGTACGGATATCGGTGACCGACCCTGATGCCACGGATTCATCCAGCGATGAAGATGATTTTTTCGAGAGGCAGAGAGTCAAGAAATATATCAATGAGATCAAAATCCAAACTGGGTGTCGAAATAATCTTCTACCCAGTTGTCGGAAGAGGCCTGCCGGTGAGCGTTCTGACTTCCGGCGCCAAGGGAAGGTGGTTCCTCCCACGAATGGGAGGAAATTTCGTGGTGTACGGCAGCGGCCCTGGGGAAAATGGGCGGCGGAGATTAGAGATCCGGCTCGCCGTGTACGGCTCTGGCTTGGGACCTACGACACGGCGGAGGAAGCTGCGATGGTTTATGATAACGCTGCCATTCAGCTTCGAGGACCGGATGCTTTGACGAACTTTGCAACGCCTCCGTCGGTGCCGATGCCGGAGAAGGAAGTTGAGACGGCCAATATCCCCTCGGTTTCCGGTTCCTATTACGATTCCGGCGAGGAGTCTCACAATTTGTCATCGCCGACTTCGGTTCTCCACTTCAGAACACCGTCGCCAGAAGAATCCGAAAAGCCCCCAAATTCCGACGAGTTGCAGAAACCACCGGCCCCGTTCGCCGATGATCAATTTCACGAATGTCAAGGCGAAACTTCTTTCTCTGAGGAGTACCACACCGAGTTCCCCAGATTCGACTATGACTTCAAGTTTCCAAGCCCCGAATCGCCGATCTTCTTGGATGACCAGCCGCTGTTCTTCGAAGACAGCATATGGAACGAAGATTTCAGTGAAATTTTCACTAACTTGCCTGAAGATTTTGGGTCGCCATTGTTGTCTTCTTCGATCGGCCAAGGAGGCGATGACTATTTCCAAGATATTTTGATGGGGTCGGACCCTTTGGTGGTTCTGTAA

mRNA sequence

ATGGAGGATACTCTGTTTTCCCCTGTTAAATTCACTGAGCACCGAAACTTCACCAACAAATTTTCCGCCAAAAAACATCACCACTCAGAAAGTAGAGTCGTACGGATATCGGTGACCGACCCTGATGCCACGGATTCATCCAGCGATGAAGATGATTTTTTCGAGAGGCAGAGAGTCAAGAAATATATCAATGAGATCAAAATCCAAACTGGGTGTCGAAATAATCTTCTACCCAGTTGTCGGAAGAGGCCTGCCGGTGAGCGTTCTGACTTCCGGCGCCAAGGGAAGGTGGTTCCTCCCACGAATGGGAGGAAATTTCGTGGTGTACGGCAGCGGCCCTGGGGAAAATGGGCGGCGGAGATTAGAGATCCGGCTCGCCGTGTACGGCTCTGGCTTGGGACCTACGACACGGCGGAGGAAGCTGCGATGGTTTATGATAACGCTGCCATTCAGCTTCGAGGACCGGATGCTTTGACGAACTTTGCAACGCCTCCGTCGGTGCCGATGCCGGAGAAGGAAGTTGAGACGGCCAATATCCCCTCGGTTTCCGGTTCCTATTACGATTCCGGCGAGGAGTCTCACAATTTGTCATCGCCGACTTCGGTTCTCCACTTCAGAACACCGTCGCCAGAAGAATCCGAAAAGCCCCCAAATTCCGACGAGTTGCAGAAACCACCGGCCCCGTTCGCCGATGATCAATTTCACGAATGTCAAGGCGAAACTTCTTTCTCTGAGGAGTACCACACCGAGTTCCCCAGATTCGACTATGACTTCAAGTTTCCAAGCCCCGAATCGCCGATCTTCTTGGATGACCAGCCGCTGTTCTTCGAAGACAGCATATGGAACGAAGATTTCAGTGAAATTTTCACTAACTTGCCTGAAGATTTTGGGTCGCCATTGTTGTCTTCTTCGATCGGCCAAGGAGGCGATGACTATTTCCAAGATATTTTGATGGGGTCGGACCCTTTGGTGGTTCTGTAA

Coding sequence (CDS)

ATGGAGGATACTCTGTTTTCCCCTGTTAAATTCACTGAGCACCGAAACTTCACCAACAAATTTTCCGCCAAAAAACATCACCACTCAGAAAGTAGAGTCGTACGGATATCGGTGACCGACCCTGATGCCACGGATTCATCCAGCGATGAAGATGATTTTTTCGAGAGGCAGAGAGTCAAGAAATATATCAATGAGATCAAAATCCAAACTGGGTGTCGAAATAATCTTCTACCCAGTTGTCGGAAGAGGCCTGCCGGTGAGCGTTCTGACTTCCGGCGCCAAGGGAAGGTGGTTCCTCCCACGAATGGGAGGAAATTTCGTGGTGTACGGCAGCGGCCCTGGGGAAAATGGGCGGCGGAGATTAGAGATCCGGCTCGCCGTGTACGGCTCTGGCTTGGGACCTACGACACGGCGGAGGAAGCTGCGATGGTTTATGATAACGCTGCCATTCAGCTTCGAGGACCGGATGCTTTGACGAACTTTGCAACGCCTCCGTCGGTGCCGATGCCGGAGAAGGAAGTTGAGACGGCCAATATCCCCTCGGTTTCCGGTTCCTATTACGATTCCGGCGAGGAGTCTCACAATTTGTCATCGCCGACTTCGGTTCTCCACTTCAGAACACCGTCGCCAGAAGAATCCGAAAAGCCCCCAAATTCCGACGAGTTGCAGAAACCACCGGCCCCGTTCGCCGATGATCAATTTCACGAATGTCAAGGCGAAACTTCTTTCTCTGAGGAGTACCACACCGAGTTCCCCAGATTCGACTATGACTTCAAGTTTCCAAGCCCCGAATCGCCGATCTTCTTGGATGACCAGCCGCTGTTCTTCGAAGACAGCATATGGAACGAAGATTTCAGTGAAATTTTCACTAACTTGCCTGAAGATTTTGGGTCGCCATTGTTGTCTTCTTCGATCGGCCAAGGAGGCGATGACTATTTCCAAGATATTTTGATGGGGTCGGACCCTTTGGTGGTTCTGTAA

Protein sequence

MEDTLFSPVKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDDFFERQRVKKYINEIKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEKPPNSDELQKPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDILMGSDPLVVL
Homology
[Close]
BLAST of Lsi05G000690 vs. Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 8.3e-46
Identity = 131/332 (39.46%), Postives = 191/332 (57.53%), Query Frame = 1 

Query: 8   PVKFTEHRNFTNKFSAKKHHHSES------RVVRISVTDPDATDSSSDEDDF-FERQRVK 67
           PVK+TEH+    K++ K     ++      R+VR+S+TD DATDSSSDE++F F R+RVK
Sbjct: 11  PVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEEEFLFPRRRVK 70

Query: 68  KYINEIKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPT----NGRKFRGVRQRPWGK 127
           + INEI+++    ++        P  +R        V  P+    N +K+RGVRQRPWGK
Sbjct: 71  RLINEIRVEPS--SSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGK 130

Query: 128 WAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVET 187
           WAAEIRDP +R R+WLGT+ TAEEAA+VYDNAAI+LRGPDALTNF   P  P P +E E 
Sbjct: 131 WAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPE-PEPVQEQEQ 190

Query: 188 ANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEES----EKPPNSDELQKPPAPFADD 247
               ++S S  +S ++S +LSSPTSVL+++T   EE      KP   + L+    P +  
Sbjct: 191 EPESNMSVSISESMDDSQHLSSPTSVLNYQTYVSEEPIDSLIKPVKQEFLEPEQEPIS-- 250

Query: 248 QFHECQGETSFSEE-YHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNEDFSEIF-- 307
            +H  +G T+ +++ +  +    D  F    P+  IF  DQP+       N+ F+++   
Sbjct: 251 -WHLGEGNTNTNDDSFPLDITFLDNYFNESLPDISIF--DQPMSPIQPTENDFFNDLMLF 310

Query: 308 -TNLPEDFGSPL--LSSSIGQGGDDYFQDILM 319
            +N  E + S +  + SS     D    D+L+
Sbjct: 311 DSNAEEYYSSEIKEIGSSFNDLDDSLISDLLL 334

[Close]
BLAST of Lsi05G000690 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.1e-45
Identity = 148/359 (41.23%), Postives = 195/359 (54.32%), Query Frame = 1 

Query: 6   FSPVKFTEHRN----FTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDD---FFERQR 65
           F P+K+TEH+     +T K S K       + V I  TDPDATDSSSDED+    F R+R
Sbjct: 7   FRPLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPRRR 66

Query: 66  VKKYINEIKIQTGCRN---NLLPSCRKR----------PAGERSDFRRQGKVVPPTNGRK 125
           VK+++NEI ++  C N    +    RKR          PA  R   R   KV      +K
Sbjct: 67  VKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASSRQ--RPNNKVSVSGQIKK 126

Query: 126 FRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPP 185
           FRGVRQRPWGKWAAEIRDP +R R+WLGT++TAEEAA+VYDNAAI+LRGPDALTNF+ PP
Sbjct: 127 FRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPP 186

Query: 186 SVPMPEKEVE----------TANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEK 245
                E+E E          T   P+ S S   + E+  +LSSPTSVL+ R+   ++ ++
Sbjct: 187 QEEEEEEEPEPVIEEKPVIMTTPTPTTSSS-ESTEEDLQHLSSPTSVLNHRSEEIQQVQQ 246

Query: 246 PPNS--DELQKPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQP 305
           P  S   E     AP+    F+   GE+   + +  + P  D  F    PE  IF  DQP
Sbjct: 247 PFKSAKPEPGVSNAPWWHTGFNTGLGES--DDSFPLDTPFLDNYFNESPPEMSIF--DQP 306

Query: 306 LFFEDSIWNEDFSEIFTNL------PEDFGSPLLSSSIGQGGDDY--FQDILMGSDPLV 325
           +   D I+ E+  +IF ++        +    L SSSI   G  +  F D L+ SD LV
Sbjct: 307 M---DQIFCEN-DDIFNDMLFLGGETMNIEDELTSSSIKDMGSTFSDFDDSLI-SDLLV 353

[Close]
BLAST of Lsi05G000690 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.2e-45
Identity = 139/358 (38.83%), Postives = 182/358 (50.84%), Query Frame = 1 

Query: 9   VKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDD------FFERQRVKKY 68
           +KFTEH+  T    ++  +  ++R++RISVTDPDATDSSSD+++        +R+RVKK+
Sbjct: 12  IKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKF 71

Query: 69  INEIKIQTG------CRNNLLPSCRKRPAGERSDFRRQGKVVPPTNG-RKFRGVRQRPWG 128
           +NE+ + +G      C        +KR     S           T G +KFRGVRQRPWG
Sbjct: 72  VNEVYLDSGAVVTGSCGQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWG 131

Query: 129 KWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF-----------ATP 188
           KWAAEIRDP +RVRLWLGTY+TAEEAAMVYDNAAIQLRGPDALTNF           A P
Sbjct: 132 KWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPP 191

Query: 189 PSVPMPEKEVETANIPSVSGSYYDSGEESHN-LSSPTSVLHFRTPSPEESEKPPNSDELQ 248
           PS    +K+    +  SV+ S   S   S++ L SP SVL                    
Sbjct: 192 PSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLR------------------- 251

Query: 249 KPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNE 308
              +PFA D+F         +     E         F    +P+F DD    F  S+  +
Sbjct: 252 ---SPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVFDFRSSVVPD 311

Query: 309 DF------SEIFT-------NLPEDFGSPLLSSSIGQGGDDYFQDI--LMGSDPLVVL 327
                    ++FT       N   DFGS L S  +    +D+FQDI  L GSDPL+ +
Sbjct: 312 YLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHM----EDHFQDIGDLFGSDPLLAV 343

[Close]
BLAST of Lsi05G000690 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-34
Identity = 125/307 (40.72%), Postives = 162/307 (52.77%), Query Frame = 1 

Query: 32  RVVRISVTDPDATDSSSDEDDFFE-------RQRVKKYINEIKIQTGCRNNLLPSCRKRP 91
           R++RISVTDP ATDSSSDE++  +       R+RVKKY+ E+ + +   +   P  +KR 
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKRK 70

Query: 92  AGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMV 151
               +       VV  T  RKFRGVRQRPWGKWAAEIRDP+RRVR+WLGT+DTAEEAA+V
Sbjct: 71  KRVVTV-----PVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIV 130

Query: 152 YDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIPSVSGSYYDSGEESHNLSSPTSVLH 211
           YDNAAIQLRGP+A  NF  PP     E+   +  +  VS      GE    L SP SVL 
Sbjct: 131 YDNAAIQLRGPNAELNFPPPPVTENVEE--ASTEVKGVSDFIIGGGE---CLRSPVSVLE 190

Query: 212 FRTPSPEESEKPPNSDELQKPPAPFADDQFHE--CQGETSFS-EEYHTEFPRFDYDFKFP 271
               SP   E     +E       F      E   + E SF+  ++       D  F F 
Sbjct: 191 ----SPFSGESTAVKEE-------FVGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFGFS 250

Query: 272 SPESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDI--LMG 327
           +  S  F  D    F D++    F+++       FGS   S       +D+FQDI  L G
Sbjct: 251 TSMSESFGGD---LFGDNL----FADMSFGSGFGFGSG--SGFSSWHVEDHFQDIGDLFG 287

[Close]
BLAST of Lsi05G000690 vs. Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-34
Identity = 121/314 (38.54%), Postives = 163/314 (51.91%), Query Frame = 1 

Query: 9   VKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDD---FFERQRVKKYINE 68
           VKFTE+R  TN   A    +   R+VRI+VTDP ATDSSSD+DD        RVK+Y+ E
Sbjct: 8   VKFTENRTVTNV--AATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKE 67

Query: 69  IKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAEIRDPA 128
           I+   G  ++   + RK    E      +  V      +K+RGVRQRPWGK+AAEIRDP+
Sbjct: 68  IRFCQG-ESSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPS 127

Query: 129 RRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIPSVSGS 188
            R R+WLGT+ TAEEAA+ YD AAI L+GP ALTNF TPP+ P P  +++T        S
Sbjct: 128 SRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPT-PTPVIDLQTV-------S 187

Query: 189 YYDSGEES-HNLSSPTSVLHFRTPSPEESEKPPNSDELQKPPAPFADDQFHECQGETSFS 248
             D G +S  +L SPTSVL F     EE+E    + EL          +  E      F 
Sbjct: 188 ACDYGRDSRQSLHSPTSVLRFNV--NEETEHEIEAIELSPERKSTVIKEEEESSAGLVFP 247

Query: 249 EEYHTEFPRFDYDFKFPSPESP--IFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPLLS 308
           + Y         +  + +  +P  +FLD++       + N + S+   N  EDF   L+ 
Sbjct: 248 DPYLLPDLSLAGECFWDTEIAPDLLFLDEETKIQSTLLPNTEVSKQGENETEDFEFGLID 307

Query: 309 SSIGQGGD-DYFQD 316
                  D D+F D
Sbjct: 308 DFESSPWDVDHFFD 308

[Close]
BLAST of Lsi05G000690 vs. TrEMBL
Match: A0A0A0LB30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357110 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 3.6e-181
Identity = 313/326 (96.01%), Postives = 321/326 (98.47%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDDFFERQRVK 60
           MEDTLFSPVKFTEHRNFTNKFSAKKHH SESRVVRISVTDPDATDSSSDEDDFFERQRVK
Sbjct: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHQSESRVVRISVTDPDATDSSSDEDDFFERQRVK 60

Query: 61  KYINEIKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAE 120
           KYINEIKIQ+GCRNNLLPSCRKRPAG+RS+FRRQGKVVPPTNG+KFRGVRQRPWGKWAAE
Sbjct: 61  KYINEIKIQSGCRNNLLPSCRKRPAGDRSEFRRQGKVVPPTNGKKFRGVRQRPWGKWAAE 120

Query: 121 IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIP 180
           IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPP VPMPEKEVETANIP
Sbjct: 121 IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPPVPMPEKEVETANIP 180

Query: 181 SVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEKPPNSDELQKPPAPFADDQFHECQGE 240
           SVSGSYYDS EESHNLSSPTSVLHFRTPSPEESEKPP SD+LQKPPAPF DDQFHECQGE
Sbjct: 181 SVSGSYYDSSEESHNLSSPTSVLHFRTPSPEESEKPPKSDDLQKPPAPFVDDQFHECQGE 240

Query: 241 TSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPL 300
           TSF+EEYHTEFPRFDYDFKFPSPE+PIFLDDQPLFFEDSIWN+DFSEIFTNLPEDFGSPL
Sbjct: 241 TSFTEEYHTEFPRFDYDFKFPSPEAPIFLDDQPLFFEDSIWNDDFSEIFTNLPEDFGSPL 300

Query: 301 LSSSIGQGGDDYFQDILMGSDPLVVL 327
           LSSSIGQGGDDYFQDILMGSDPLVVL
Sbjct: 301 LSSSIGQGGDDYFQDILMGSDPLVVL 326

[Close]
BLAST of Lsi05G000690 vs. TrEMBL
Match: W9R5J7_9ROSA (Ethylene-responsive transcription factor CRF4 OS=Morus notabilis GN=L484_011468 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.5e-78
Identity = 196/373 (52.55%), Postives = 234/373 (62.73%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKF--------------SAKKHHHSESRVVRISVTDPDATDS 60
           ME ++  P+K+TEHR+ T K               S+ +   +  RVVRISV DP ATDS
Sbjct: 1   MEQSILCPIKYTEHRSVTKKVRKQSRKSLCSPSSSSSAEFSPAVPRVVRISVMDPYATDS 60

Query: 61  SSDEDD----FFERQRVKKYINEIKIQTGCRNNLLP-SCRKRPAGERSDFRRQGKVVPPT 120
           S DE+D     F RQRVK+Y+NEIKI+T C+  +   + RKRPA E    RR  K    T
Sbjct: 61  SDDEEDEGEFIFSRQRVKRYVNEIKIETSCKPRIAAVNARKRPAVEAPAHRRPIKTT-TT 120

Query: 121 NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 180
           NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAI+LRGPDALTNF
Sbjct: 121 NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNF 180

Query: 181 ATP----PSVPMPEKEVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEKP- 240
            TP     +  +PE+   ++   SVSG  YDSG+ES NLSSPTSVLHFRT S EE+E P 
Sbjct: 181 VTPFQKDQNPELPEENKASSASASVSG--YDSGDESRNLSSPTSVLHFRTHSTEEAEAPQ 240

Query: 241 ----PNSDELQKP---PAPFADDQFHECQGETSFSEE----YHTEFPRFDYD-FKFPSPE 300
               P   E+ +P    AP       ECQGETS +++    +  +FP FD D FKF SPE
Sbjct: 241 KPVEPLEAEVCQPLLLKAPKQVMIVEECQGETSIADDLGEYWPLDFPSFDDDVFKFESPE 300

Query: 301 SPIFLDDQPLFFE-----------DSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYF 327
           S    +   LF E           +S+  EDFS++F +  E    PL S++    GDD F
Sbjct: 301 SETLFEPSFLFDENDDVSAITSLPESVLKEDFSDMFLDSFETSSPPLPSAA--WQGDDLF 360

[Close]
BLAST of Lsi05G000690 vs. TrEMBL
Match: D5L0Z7_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D13 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.6e-75
Identity = 192/366 (52.46%), Postives = 228/366 (62.30%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKF-SAKKHHHSES------RVVRISVTDPDATDSSSDEDD- 60
           ME ++  P+K++EHR+ T K    +K   SES      R+VRISVTDPDATDSSSDE++ 
Sbjct: 1   MESSILCPIKYSEHRSTTKKLMKPRKKATSESASTVTPRIVRISVTDPDATDSSSDEEEE 60

Query: 61  FFERQRVKKYINEIKIQTGCRNNL-LPSCRKRPAGERSDFRRQGK--VVPPTNGRKFRGV 120
           FF RQRVK Y+NEI I+T  RN+L + + RKRPA E    RR  K  V PP  G+K+RGV
Sbjct: 61  FFGRQRVKHYVNEINIETDFRNSLVINNGRKRPAAEVPVNRRPMKNAVSPPNGGKKYRGV 120

Query: 121 RQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATP----- 180
           RQRPWGKWAAEIRDPARR RLWLGT+DTAEEAAMVYDNAAI+LRGPDALTNF  P     
Sbjct: 121 RQRPWGKWAAEIRDPARRQRLWLGTFDTAEEAAMVYDNAAIKLRGPDALTNFVAPPPKEE 180

Query: 181 --PSVPMPEK-EVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRT-PSPEESEKP---- 240
             P  P+ E  EVET    S SG  YDSG ESHNL+SPTSVLHFR+ PS E++ KP    
Sbjct: 181 EKPEPPVIESIEVETNGTTSASG--YDSGSESHNLASPTSVLHFRSQPSIEDAGKPQKIQ 240

Query: 241 ------PNSDELQKPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLD 300
                  + DE +      +DD  +       F      + P FD  F FP+PESP+F  
Sbjct: 241 VFDRVDEDEDETETGTNILSDDLSY-------FGNYLPLDLPYFDDAFSFPAPESPLF-- 300

Query: 301 DQPLFFE----------DSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDILMGS 327
           D PLFF+          D    +DFSE+  +  +   S   S      GDDYFQDIL GS
Sbjct: 301 DSPLFFDDVPAAAASLPDCFMKDDFSELLRDTYDTSLSHTTSPMF--QGDDYFQDILFGS 353

[Close]
BLAST of Lsi05G000690 vs. TrEMBL
Match: A5B445_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02400 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-73
Identity = 190/355 (53.52%), Postives = 228/355 (64.23%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHHSES-----RVVRISVTDPDATDSSSDEDD-FF 60
           M+ +L  P+K+TEHR+ TNK + +     E      RVVRISVTDPDATDSSSDE+D  F
Sbjct: 1   MDQSLLYPIKYTEHRSITNKQTRQSRRPPEQNSGVPRVVRISVTDPDATDSSSDEEDELF 60

Query: 61  ERQRVKKYINEIKIQTGCRNNLLPSCRKRPAG--ERSDFRRQGKVVPPTNGRKFRGVRQR 120
            RQRVK+Y NEI I T  ++    + RKR AG  E +  RR  KV  PTNGRKFRGVRQR
Sbjct: 61  SRQRVKRYTNEINIATVSKSIAPVAGRKRGAGAGEMAPCRRPMKVAAPTNGRKFRGVRQR 120

Query: 121 PWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEK 180
           PWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAI+LRGPDALTNF TPP  P PE 
Sbjct: 121 PWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFVTPPPPPKPE- 180

Query: 181 EVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRT--PSPEESEKPPNSDELQKPPA--P 240
                N+ +VSG  Y+SG+ES NLSSPTSVLHFRT   S +E+E    SD + +  +  P
Sbjct: 181 ----INLTAVSG--YESGDESRNLSSPTSVLHFRTHSSSTDEAEPSNRSDPVHETESSEP 240

Query: 241 FADDQFH----------ECQGETSFSEEYHTEF-----PRFDYDFKFPSPESPIFLDDQP 300
             + + H          ECQGET+ + +   ++     P  +  F F +P S IF D   
Sbjct: 241 VQNPETHQQQPVQPVREECQGETTNTGDSSVDYLPMDLPFINDMFNFEAPGS-IFEDTSI 300

Query: 301 LFFEDSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDI--LMGSDPLVVL 327
           L   +SI NEDFS++F + P +F      SS  +  DDYFQDI  L  SD L VL
Sbjct: 301 L--PESILNEDFSDMFLDSPINFD----ISSSWRLEDDYFQDIGDLFTSDSLSVL 341

[Close]
BLAST of Lsi05G000690 vs. TrEMBL
Match: A0A061G219_THECC (Ethylene-responsive transcription factor, putative OS=Theobroma cacao GN=TCM_015336 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.3e-73
Identity = 189/366 (51.64%), Postives = 229/366 (62.57%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKF---------SAKKHHHSES-------RVVRISVTDPDAT 60
           M+ ++  P+K+TEH+N T  F         ++  H  + +       R+VR+SVTDPDAT
Sbjct: 1   MDQSILCPIKYTEHKNVTKIFRKPSLKPKKTSSDHDRTHNNNTPDVPRIVRVSVTDPDAT 60

Query: 61  DSSSDED-DFFERQRVKKYINEIKIQTGCRNNLLPSC----RKRPAGER---SDFRRQGK 120
           DSSSDE+ DFF RQRVK+Y+NEI I+  C+N    +     RKR A      +  RR  K
Sbjct: 61  DSSSDEEADFFGRQRVKRYVNEINIEATCKNTATTTISNTNRKRTAAAADVTTACRRPLK 120

Query: 121 VVPPT-NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGP 180
           +     NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAI+LRGP
Sbjct: 121 LSSSNGNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGP 180

Query: 181 DALTNFATPPSVPMPEKEVETANIPSVSGSYYDSGEE-SHNLSSPTSVLHFRTPSPEES- 240
           DALTNF TPP+    EK  E  N+ SVSG  Y+SG+E SHNLSSPTSVL+FRT S EE+ 
Sbjct: 181 DALTNFVTPPAKENKEKP-EIINVASVSG--YESGDESSHNLSSPTSVLNFRTQSSEETA 240

Query: 241 ---EKPPN--SDELQKPPAPFADDQFHECQGETSFS------EEYHTEFPRFDYDFKFPS 300
              EKP     +E  KPP         ECQGET  +      +    +FP  D  F  P 
Sbjct: 241 VEPEKPVQELQEEESKPPPVQEQVVPSECQGETGTNLPDDSGDYLPLDFPFLDEFFNIPV 300

Query: 301 PESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDI--LMGS 327
           P   +F D   +  E S+++EDFS +  + P+DFG    SSSI Q  DDYF+DI  L  S
Sbjct: 301 PGLSLFDDTATILPESSVFSEDFSNMLLDTPQDFGCS-SSSSISQ-VDDYFEDIGDLFFS 360

[Close]
BLAST of Lsi05G000690 vs. TAIR10
Match: AT4G27950.1 (AT4G27950.1 cytokinin response factor 4)

HSP 1 Score: 185.7 bits (470), Expect = 4.7e-47
Identity = 131/332 (39.46%), Postives = 191/332 (57.53%), Query Frame = 1 

Query: 8   PVKFTEHRNFTNKFSAKKHHHSES------RVVRISVTDPDATDSSSDEDDF-FERQRVK 67
           PVK+TEH+    K++ K     ++      R+VR+S+TD DATDSSSDE++F F R+RVK
Sbjct: 11  PVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEEEFLFPRRRVK 70

Query: 68  KYINEIKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPT----NGRKFRGVRQRPWGK 127
           + INEI+++    ++        P  +R        V  P+    N +K+RGVRQRPWGK
Sbjct: 71  RLINEIRVEPS--SSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGK 130

Query: 128 WAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVET 187
           WAAEIRDP +R R+WLGT+ TAEEAA+VYDNAAI+LRGPDALTNF   P  P P +E E 
Sbjct: 131 WAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPE-PEPVQEQEQ 190

Query: 188 ANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEES----EKPPNSDELQKPPAPFADD 247
               ++S S  +S ++S +LSSPTSVL+++T   EE      KP   + L+    P +  
Sbjct: 191 EPESNMSVSISESMDDSQHLSSPTSVLNYQTYVSEEPIDSLIKPVKQEFLEPEQEPIS-- 250

Query: 248 QFHECQGETSFSEE-YHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNEDFSEIF-- 307
            +H  +G T+ +++ +  +    D  F    P+  IF  DQP+       N+ F+++   
Sbjct: 251 -WHLGEGNTNTNDDSFPLDITFLDNYFNESLPDISIF--DQPMSPIQPTENDFFNDLMLF 310

Query: 308 -TNLPEDFGSPL--LSSSIGQGGDDYFQDILM 319
            +N  E + S +  + SS     D    D+L+
Sbjct: 311 DSNAEEYYSSEIKEIGSSFNDLDDSLISDLLL 334

[Close]
BLAST of Lsi05G000690 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-46
Identity = 148/359 (41.23%), Postives = 195/359 (54.32%), Query Frame = 1 

Query: 6   FSPVKFTEHRN----FTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDD---FFERQR 65
           F P+K+TEH+     +T K S K       + V I  TDPDATDSSSDED+    F R+R
Sbjct: 7   FRPLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPRRR 66

Query: 66  VKKYINEIKIQTGCRN---NLLPSCRKR----------PAGERSDFRRQGKVVPPTNGRK 125
           VK+++NEI ++  C N    +    RKR          PA  R   R   KV      +K
Sbjct: 67  VKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASSRQ--RPNNKVSVSGQIKK 126

Query: 126 FRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPP 185
           FRGVRQRPWGKWAAEIRDP +R R+WLGT++TAEEAA+VYDNAAI+LRGPDALTNF+ PP
Sbjct: 127 FRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPP 186

Query: 186 SVPMPEKEVE----------TANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEK 245
                E+E E          T   P+ S S   + E+  +LSSPTSVL+ R+   ++ ++
Sbjct: 187 QEEEEEEEPEPVIEEKPVIMTTPTPTTSSS-ESTEEDLQHLSSPTSVLNHRSEEIQQVQQ 246

Query: 246 PPNS--DELQKPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQP 305
           P  S   E     AP+    F+   GE+   + +  + P  D  F    PE  IF  DQP
Sbjct: 247 PFKSAKPEPGVSNAPWWHTGFNTGLGES--DDSFPLDTPFLDNYFNESPPEMSIF--DQP 306

Query: 306 LFFEDSIWNEDFSEIFTNL------PEDFGSPLLSSSIGQGGDDY--FQDILMGSDPLV 325
           +   D I+ E+  +IF ++        +    L SSSI   G  +  F D L+ SD LV
Sbjct: 307 M---DQIFCEN-DDIFNDMLFLGGETMNIEDELTSSSIKDMGSTFSDFDDSLI-SDLLV 353

[Close]
BLAST of Lsi05G000690 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 182.2 bits (461), Expect = 5.2e-46
Identity = 139/358 (38.83%), Postives = 182/358 (50.84%), Query Frame = 1 

Query: 9   VKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDD------FFERQRVKKY 68
           +KFTEH+  T    ++  +  ++R++RISVTDPDATDSSSD+++        +R+RVKK+
Sbjct: 12  IKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKF 71

Query: 69  INEIKIQTG------CRNNLLPSCRKRPAGERSDFRRQGKVVPPTNG-RKFRGVRQRPWG 128
           +NE+ + +G      C        +KR     S           T G +KFRGVRQRPWG
Sbjct: 72  VNEVYLDSGAVVTGSCGQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWG 131

Query: 129 KWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF-----------ATP 188
           KWAAEIRDP +RVRLWLGTY+TAEEAAMVYDNAAIQLRGPDALTNF           A P
Sbjct: 132 KWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPP 191

Query: 189 PSVPMPEKEVETANIPSVSGSYYDSGEESHN-LSSPTSVLHFRTPSPEESEKPPNSDELQ 248
           PS    +K+    +  SV+ S   S   S++ L SP SVL                    
Sbjct: 192 PSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLR------------------- 251

Query: 249 KPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNE 308
              +PFA D+F         +     E         F    +P+F DD    F  S+  +
Sbjct: 252 ---SPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDFSAPLFSDDDVFDFRSSVVPD 311

Query: 309 DF------SEIFT-------NLPEDFGSPLLSSSIGQGGDDYFQDI--LMGSDPLVVL 327
                    ++FT       N   DFGS L S  +    +D+FQDI  L GSDPL+ +
Sbjct: 312 YLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHM----EDHFQDIGDLFGSDPLLAV 343

[Close]
BLAST of Lsi05G000690 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 125/307 (40.72%), Postives = 162/307 (52.77%), Query Frame = 1 

Query: 32  RVVRISVTDPDATDSSSDEDDFFE-------RQRVKKYINEIKIQTGCRNNLLPSCRKRP 91
           R++RISVTDP ATDSSSDE++  +       R+RVKKY+ E+ + +   +   P  +KR 
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKKRK 70

Query: 92  AGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMV 151
               +       VV  T  RKFRGVRQRPWGKWAAEIRDP+RRVR+WLGT+DTAEEAA+V
Sbjct: 71  KRVVTV-----PVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIV 130

Query: 152 YDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIPSVSGSYYDSGEESHNLSSPTSVLH 211
           YDNAAIQLRGP+A  NF  PP     E+   +  +  VS      GE    L SP SVL 
Sbjct: 131 YDNAAIQLRGPNAELNFPPPPVTENVEE--ASTEVKGVSDFIIGGGE---CLRSPVSVLE 190

Query: 212 FRTPSPEESEKPPNSDELQKPPAPFADDQFHE--CQGETSFS-EEYHTEFPRFDYDFKFP 271
               SP   E     +E       F      E   + E SF+  ++       D  F F 
Sbjct: 191 ----SPFSGESTAVKEE-------FVGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFGFS 250

Query: 272 SPESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDI--LMG 327
           +  S  F  D    F D++    F+++       FGS   S       +D+FQDI  L G
Sbjct: 251 TSMSESFGGD---LFGDNL----FADMSFGSGFGFGSG--SGFSSWHVEDHFQDIGDLFG 287

[Close]
BLAST of Lsi05G000690 vs. TAIR10
Match: AT3G61630.1 (AT3G61630.1 cytokinin response factor 6)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 121/314 (38.54%), Postives = 163/314 (51.91%), Query Frame = 1 

Query: 9   VKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDD---FFERQRVKKYINE 68
           VKFTE+R  TN   A    +   R+VRI+VTDP ATDSSSD+DD        RVK+Y+ E
Sbjct: 8   VKFTENRTVTNV--AATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKE 67

Query: 69  IKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAEIRDPA 128
           I+   G  ++   + RK    E      +  V      +K+RGVRQRPWGK+AAEIRDP+
Sbjct: 68  IRFCQG-ESSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPS 127

Query: 129 RRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIPSVSGS 188
            R R+WLGT+ TAEEAA+ YD AAI L+GP ALTNF TPP+ P P  +++T        S
Sbjct: 128 SRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPT-PTPVIDLQTV-------S 187

Query: 189 YYDSGEES-HNLSSPTSVLHFRTPSPEESEKPPNSDELQKPPAPFADDQFHECQGETSFS 248
             D G +S  +L SPTSVL F     EE+E    + EL          +  E      F 
Sbjct: 188 ACDYGRDSRQSLHSPTSVLRFNV--NEETEHEIEAIELSPERKSTVIKEEEESSAGLVFP 247

Query: 249 EEYHTEFPRFDYDFKFPSPESP--IFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPLLS 308
           + Y         +  + +  +P  +FLD++       + N + S+   N  EDF   L+ 
Sbjct: 248 DPYLLPDLSLAGECFWDTEIAPDLLFLDEETKIQSTLLPNTEVSKQGENETEDFEFGLID 307

Query: 309 SSIGQGGD-DYFQD 316
                  D D+F D
Sbjct: 308 DFESSPWDVDHFFD 308

[Close]
BLAST of Lsi05G000690 vs. NCBI nr
Match: gi|449463464|ref|XP_004149454.1| (PREDICTED: ethylene-responsive transcription factor CRF4 [Cucumis sativus])

HSP 1 Score: 642.1 bits (1655), Expect = 5.2e-181
Identity = 313/326 (96.01%), Postives = 321/326 (98.47%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDDFFERQRVK 60
           MEDTLFSPVKFTEHRNFTNKFSAKKHH SESRVVRISVTDPDATDSSSDEDDFFERQRVK
Sbjct: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHQSESRVVRISVTDPDATDSSSDEDDFFERQRVK 60

Query: 61  KYINEIKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAE 120
           KYINEIKIQ+GCRNNLLPSCRKRPAG+RS+FRRQGKVVPPTNG+KFRGVRQRPWGKWAAE
Sbjct: 61  KYINEIKIQSGCRNNLLPSCRKRPAGDRSEFRRQGKVVPPTNGKKFRGVRQRPWGKWAAE 120

Query: 121 IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIP 180
           IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPP VPMPEKEVETANIP
Sbjct: 121 IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPPVPMPEKEVETANIP 180

Query: 181 SVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEKPPNSDELQKPPAPFADDQFHECQGE 240
           SVSGSYYDS EESHNLSSPTSVLHFRTPSPEESEKPP SD+LQKPPAPF DDQFHECQGE
Sbjct: 181 SVSGSYYDSSEESHNLSSPTSVLHFRTPSPEESEKPPKSDDLQKPPAPFVDDQFHECQGE 240

Query: 241 TSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPL 300
           TSF+EEYHTEFPRFDYDFKFPSPE+PIFLDDQPLFFEDSIWN+DFSEIFTNLPEDFGSPL
Sbjct: 241 TSFTEEYHTEFPRFDYDFKFPSPEAPIFLDDQPLFFEDSIWNDDFSEIFTNLPEDFGSPL 300

Query: 301 LSSSIGQGGDDYFQDILMGSDPLVVL 327
           LSSSIGQGGDDYFQDILMGSDPLVVL
Sbjct: 301 LSSSIGQGGDDYFQDILMGSDPLVVL 326

[Close]
BLAST of Lsi05G000690 vs. NCBI nr
Match: gi|659077675|ref|XP_008439327.1| (PREDICTED: ethylene-responsive transcription factor CRF4-like [Cucumis melo])

HSP 1 Score: 636.7 bits (1641), Expect = 2.2e-179
Identity = 313/327 (95.72%), Postives = 320/327 (97.86%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHHSESRVVRISVTDPDATDSSSDEDDFFERQRVK 60
           MEDTLFSPVKFTEHRNFTNKFSAKKHH SESRVVRISVTDPDATDSSSDEDDFFERQRVK
Sbjct: 1   MEDTLFSPVKFTEHRNFTNKFSAKKHHQSESRVVRISVTDPDATDSSSDEDDFFERQRVK 60

Query: 61  KYINEIKIQTGCRNNLLPSCRKRPAGERSDFRRQGKVVPPTNGRKFRGVRQRPWGKWAAE 120
           KYINEIKIQ+GCRNNLLPSCRKRPAG+RS+FRRQGKVVPPTNG+KFRGVRQRPWGKWAAE
Sbjct: 61  KYINEIKIQSGCRNNLLPSCRKRPAGDRSEFRRQGKVVPPTNGKKFRGVRQRPWGKWAAE 120

Query: 121 IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPSVPMPEKEVETANIP 180
           IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPP+VPMPEKEVET NIP
Sbjct: 121 IRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPAVPMPEKEVETTNIP 180

Query: 181 SVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEKPPNSDELQKPPAPFADDQFHECQGE 240
           SVSGSYYDS EESHNLSSPTSVLHFRTPSPEESEKPP SD+LQKPPAPF DDQFHECQGE
Sbjct: 181 SVSGSYYDSSEESHNLSSPTSVLHFRTPSPEESEKPPKSDDLQKPPAPFVDDQFHECQGE 240

Query: 241 TSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNEDFSEIFTNLPEDFGSPL 300
           TSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWN+DFSEIFTNLPEDFGSPL
Sbjct: 241 TSFSEEYHTEFPRFDYDFKFPSPESPIFLDDQPLFFEDSIWNDDFSEIFTNLPEDFGSPL 300

Query: 301 L-SSSIGQGGDDYFQDILMGSDPLVVL 327
           L SSSIGQGGDDYFQDIL GSDPLVVL
Sbjct: 301 LSSSSIGQGGDDYFQDILTGSDPLVVL 327

[Close]
BLAST of Lsi05G000690 vs. NCBI nr
Match: gi|1009174441|ref|XP_015868349.1| (PREDICTED: ethylene-responsive transcription factor CRF4-like [Ziziphus jujuba])

HSP 1 Score: 302.4 bits (773), Expect = 9.8e-79
Identity = 192/375 (51.20%), Postives = 240/375 (64.00%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKFS--AKKHHHSES----------RVVRISVTDPDATDSSS 60
           ME ++  P+K+TEHR  T   +  +KK   S S          RVVRIS+TDPDATDSSS
Sbjct: 1   MEQSILCPIKYTEHRKVTTMLTKPSKKSSLSSSEYSTGTGTVPRVVRISITDPDATDSSS 60

Query: 61  DED-DFFERQRVKKYINEIKIQTGCRNNLLPSC-RKRPAGERSDFRRQGKVVP---PTNG 120
           DE+ + F RQRVK+Y+NE+ I+TGC+ +++ +  RKRPA E +  RR  K  P   P+NG
Sbjct: 61  DEEGELFCRQRVKRYVNEVNIETGCKASIVANNGRKRPAAE-APCRRPIKTSPTPNPSNG 120

Query: 121 RKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFAT 180
           +KFRGVRQRPWGKWAAEIRDPARRVR+WLGTYDTAEEAAMVYDNAAI+LRGPDALTNF T
Sbjct: 121 KKFRGVRQRPWGKWAAEIRDPARRVRVWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFVT 180

Query: 181 PPSVPMPEKEVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESE--------K 240
           PP    P+ E E     SVSG  YDSGEES N++SPTSVLHFR  S EE E        +
Sbjct: 181 PPPRENPDPEPELNGGTSVSG--YDSGEESRNVASPTSVLHFRRQSNEEEEGGGAQKLLE 240

Query: 241 PPNSDELQKPPAP----FADDQFHECQGETSFSEEYHTEFP--------RFDYDFKFPSP 300
             +  E+ KPP+P      ++   EC+GET+ +++     P          D +FKF +P
Sbjct: 241 AVHEAEVCKPPSPTPPAIPEELVQECEGETNIADDLGNYLPLDLPLDLSYLDNEFKFSAP 300

Query: 301 ESPIFLDDQPLFFEDS------------IWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDD 327
           ESP+ L + P + +D             I  EDFS++F +   D  S   SS + Q GDD
Sbjct: 301 ESPV-LFESPFYLDDEEQETILEPLPEYILKEDFSDMFRD-SYDLSSSSSSSGMCQ-GDD 360

[Close]
BLAST of Lsi05G000690 vs. NCBI nr
Match: gi|703103956|ref|XP_010097869.1| (Ethylene-responsive transcription factor CRF4 [Morus notabilis])

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 196/373 (52.55%), Postives = 234/373 (62.73%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKF--------------SAKKHHHSESRVVRISVTDPDATDS 60
           ME ++  P+K+TEHR+ T K               S+ +   +  RVVRISV DP ATDS
Sbjct: 1   MEQSILCPIKYTEHRSVTKKVRKQSRKSLCSPSSSSSAEFSPAVPRVVRISVMDPYATDS 60

Query: 61  SSDEDD----FFERQRVKKYINEIKIQTGCRNNLLP-SCRKRPAGERSDFRRQGKVVPPT 120
           S DE+D     F RQRVK+Y+NEIKI+T C+  +   + RKRPA E    RR  K    T
Sbjct: 61  SDDEEDEGEFIFSRQRVKRYVNEIKIETSCKPRIAAVNARKRPAVEAPAHRRPIKTT-TT 120

Query: 121 NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNF 180
           NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAI+LRGPDALTNF
Sbjct: 121 NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNF 180

Query: 181 ATP----PSVPMPEKEVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRTPSPEESEKP- 240
            TP     +  +PE+   ++   SVSG  YDSG+ES NLSSPTSVLHFRT S EE+E P 
Sbjct: 181 VTPFQKDQNPELPEENKASSASASVSG--YDSGDESRNLSSPTSVLHFRTHSTEEAEAPQ 240

Query: 241 ----PNSDELQKP---PAPFADDQFHECQGETSFSEE----YHTEFPRFDYD-FKFPSPE 300
               P   E+ +P    AP       ECQGETS +++    +  +FP FD D FKF SPE
Sbjct: 241 KPVEPLEAEVCQPLLLKAPKQVMIVEECQGETSIADDLGEYWPLDFPSFDDDVFKFESPE 300

Query: 301 SPIFLDDQPLFFE-----------DSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYF 327
           S    +   LF E           +S+  EDFS++F +  E    PL S++    GDD F
Sbjct: 301 SETLFEPSFLFDENDDVSAITSLPESVLKEDFSDMFLDSFETSSPPLPSAA--WQGDDLF 360

[Close]
BLAST of Lsi05G000690 vs. NCBI nr
Match: gi|657969904|ref|XP_008376686.1| (PREDICTED: ethylene-responsive transcription factor CRF4-like [Malus domestica])

HSP 1 Score: 290.8 bits (743), Expect = 2.9e-75
Identity = 192/366 (52.46%), Postives = 229/366 (62.57%), Query Frame = 1 

Query: 1   MEDTLFSPVKFTEHRNFTNKF-SAKKHHHSES------RVVRISVTDPDATDSSSDEDD- 60
           ME ++  P+K++EHR+ T K    +K   SES      R+VRISVTDPDATDSSSDE++ 
Sbjct: 1   MESSILCPIKYSEHRSTTKKLMKPRKKATSESASTVTPRIVRISVTDPDATDSSSDEEEE 60

Query: 61  FFERQRVKKYINEIKIQTGCRNNL-LPSCRKRPAGERSDFRRQGK--VVPPTNGRKFRGV 120
           FF RQRVK Y+NEI I+T  RN+L + + RKRPA E    RR  K  V PP  G+K+RGV
Sbjct: 61  FFGRQRVKHYVNEINIETDFRNSLVINNGRKRPAAEVPVNRRPMKNAVSPPNGGKKYRGV 120

Query: 121 RQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATP----- 180
           RQRPWGKWAAEIRDPARR RLWLGT+DTAEEAAMVYDNAAI+LRGPDALTNF  P     
Sbjct: 121 RQRPWGKWAAEIRDPARRQRLWLGTFDTAEEAAMVYDNAAIKLRGPDALTNFVAPPPKEE 180

Query: 181 --PSVPMPEK-EVETANIPSVSGSYYDSGEESHNLSSPTSVLHFRT-PSPEESEKP---- 240
             P  P+ E  EVET    S SG  YDSG ESHNL+SPTSVLHFR+ PS E++ KP    
Sbjct: 181 EKPEPPVIESIEVETNGTTSASG--YDSGSESHNLASPTSVLHFRSQPSIEDAGKPQKIQ 240

Query: 241 ------PNSDELQKPPAPFADDQFHECQGETSFSEEYHTEFPRFDYDFKFPSPESPIFLD 300
                  + DE +      +DD  +       F      + P FD  F FP+PESP+F  
Sbjct: 241 VFDRVDEDEDETETGTNILSDDLSY-------FGNYLPLDLPYFDDAFSFPAPESPLF-- 300

Query: 301 DQPLFFE----------DSIWNEDFSEIFTNLPEDFGSPLLSSSIGQGGDDYFQDILMGS 327
           D PLFF+          D    +DFSE++ +  +   S   S      GDDYFQDIL GS
Sbjct: 301 DSPLFFDDVPAAAASLPDCFMKDDFSELYRDTYDTSLSHTASPMF--QGDDYFQDILFGS 353

The following BLAST results are available for this feature:
BLAST of Lsi05G000690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CRF4_ARATH8.3e-4639.46Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE... [more]
CRF3_ARATH4.1e-4541.23Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
CRF2_ARATH9.2e-4538.83Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF1_ARATH2.5e-3440.72Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
CRF6_ARATH2.5e-3438.54Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE... [more]
BLAST of Lsi05G000690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB30_CUCSA3.6e-18196.01Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357110 PE=4 SV=1[more]
W9R5J7_9ROSA7.5e-7852.55Ethylene-responsive transcription factor CRF4 OS=Morus notabilis GN=L484_011468 ... [more]
D5L0Z7_MALDO4.6e-7552.46AP2 domain class transcription factor OS=Malus domestica GN=AP2D13 PE=2 SV=1[more]
A5B445_VITVI2.5e-7353.52Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02400 PE=4 SV=... [more]
A0A061G219_THECC4.3e-7351.64Ethylene-responsive transcription factor, putative OS=Theobroma cacao GN=TCM_015... [more]
BLAST of Lsi05G000690 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27950.14.7e-4739.46 cytokinin response factor 4[more]
AT5G53290.12.3e-4641.23 cytokinin response factor 3[more]
AT4G23750.15.2e-4638.83 cytokinin response factor 2[more]
AT4G11140.11.4e-3540.72 cytokinin response factor 1[more]
AT3G61630.11.4e-3538.54 cytokinin response factor 6[more]
BLAST of Lsi05G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463464|ref|XP_004149454.1|5.2e-18196.01PREDICTED: ethylene-responsive transcription factor CRF4 [Cucumis sativus][more]
gi|659077675|ref|XP_008439327.1|2.2e-17995.72PREDICTED: ethylene-responsive transcription factor CRF4-like [Cucumis melo][more]
gi|1009174441|ref|XP_015868349.1|9.8e-7951.20PREDICTED: ethylene-responsive transcription factor CRF4-like [Ziziphus jujuba][more]
gi|703103956|ref|XP_010097869.1|1.1e-7752.55Ethylene-responsive transcription factor CRF4 [Morus notabilis][more]
gi|657969904|ref|XP_008376686.1|2.9e-7552.46PREDICTED: ethylene-responsive transcription factor CRF4-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR017392AP2/ERF-transcript_factor
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G000690.1Lsi05G000690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 106..117
score: 3.4E-10coord: 128..144
score: 3.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 104..162
score: 6.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 105..154
score: 1.1
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 105..168
score: 9.5
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 105..162
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 105..162
score: 1.96
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..326
score: 5.3
NoneNo IPR availablePANTHERPTHR31194:SF16SUBFAMILY NOT NAMEDcoord: 1..326
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G000690Csa5G139630Cucumber (Chinese Long) v2culsiB379
Lsi05G000690Csa3G357110Cucumber (Chinese Long) v2culsiB218
Lsi05G000690CSPI05G03380Wild cucumber (PI 183967)cpilsiB381
Lsi05G000690CSPI03G22130Wild cucumber (PI 183967)cpilsiB216
Lsi05G000690Cucsa.201950Cucumber (Gy14) v1cgylsiB348
Lsi05G000690Cucsa.012850Cucumber (Gy14) v1cgylsiB321
Lsi05G000690CmaCh18G012940Cucurbita maxima (Rimu)cmalsiB385
Lsi05G000690CmaCh16G000780Cucurbita maxima (Rimu)cmalsiB318
Lsi05G000690CmaCh15G010430Cucurbita maxima (Rimu)cmalsiB289
Lsi05G000690CmaCh02G010990Cucurbita maxima (Rimu)cmalsiB584
Lsi05G000690CmoCh16G000820Cucurbita moschata (Rifu)cmolsiB307
Lsi05G000690CmoCh15G011020Cucurbita moschata (Rifu)cmolsiB278
Lsi05G000690CmoCh18G013230Cucurbita moschata (Rifu)cmolsiB370
Lsi05G000690CmoCh02G011250Cucurbita moschata (Rifu)cmolsiB559
Lsi05G000690Cla004223Watermelon (97103) v1lsiwmB361
Lsi05G000690Cla021189Watermelon (97103) v1lsiwmB372
Lsi05G000690Cla004912Watermelon (97103) v1lsiwmB376
Lsi05G000690MELO3C005867Melon (DHL92) v3.5.1lsimeB337
Lsi05G000690MELO3C006973Melon (DHL92) v3.5.1lsimeB368
Lsi05G000690ClCG05G008650Watermelon (Charleston Gray)lsiwcgB332
Lsi05G000690ClCG01G000610Watermelon (Charleston Gray)lsiwcgB324
Lsi05G000690ClCG05G001070Watermelon (Charleston Gray)lsiwcgB342
Lsi05G000690MELO3C006973.2Melon (DHL92) v3.6.1lsimedB395
Lsi05G000690MELO3C005867.2Melon (DHL92) v3.6.1lsimedB352
Lsi05G000690Cla97C05G090810Watermelon (97103) v2lsiwmbB329
Lsi05G000690Cla97C05G081370Watermelon (97103) v2lsiwmbB339
Lsi05G000690Cla97C01G000670Watermelon (97103) v2lsiwmbB318
Lsi05G000690Bhi01G000310Wax gourdlsiwgoB442
Lsi05G000690Bhi12G000538Wax gourdlsiwgoB418
Lsi05G000690Bhi01G001062Wax gourdlsiwgoB431
Lsi05G000690Cp4.1LG14g06560Cucurbita pepo (Zucchini)cpelsiB178
Lsi05G000690Cp4.1LG09g00450Cucurbita pepo (Zucchini)cpelsiB037
Lsi05G000690CsGy5G000620Cucumber (Gy14) v2cgyblsiB343
Lsi05G000690CsGy3G021180Cucumber (Gy14) v2cgyblsiB186
Lsi05G000690Carg15088Silver-seed gourdcarlsiB904
Lsi05G000690Carg20360Silver-seed gourdcarlsiB490
Lsi05G000690CsaV3_3G021840Cucumber (Chinese Long) v3cuclsiB221
Lsi05G000690CsaV3_5G000710Cucumber (Chinese Long) v3cuclsiB401
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi05G000690Lsi09G000420Bottle gourd (USVL1VR-Ls)lsilsiB013
Lsi05G000690Lsi05G020910Bottle gourd (USVL1VR-Ls)lsilsiB158
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G000690Silver-seed gourdcarlsiB716