Lsi06G007970 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G007970
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRubisco accumulation factor 1, chloroplastic
Locationchr06 : 16640422 .. 16641774 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCCACCACCACCACCGCCAACTCTCTCACTTCTCTCTCAGCCGCCGCCCACACCACCGCCACCTTCCTCCATCCTCCACGAGGCTCCCCTCTCCACCTCTTCCTCCGCCGCCGTCCAAAGCCCATTTCCGCCATTATAAACCCTTTCCCTCCCCCCTTAGCCGCAAAGCAACAAGTCTACCAGCCATTCCGGCCCCCTCCCTCTCCTCTCCCCTCTCAATACCGCTCCCTTGACGCCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGATTCAAGAAGGCTTCACTCCTCCCACTCTAGAGGAAATCACCGGAATCAGCGGTGTCCAACAGAATATCTTCGTCGTCGGCGCTCAGGTTCGCGAATCCCTAGTCCAGTCCAACAACTCCGATCCAGATGTAATCGCCGCCTTCGATACCAGCGGCGCCGAGTTGCTCTATGAACTTCGCCTCGTAAGTACCGAGAAACGCGCCGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCGCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAGAGGGGATAAAGGTTGGGAGTGTTTCGATTACGATTCTCCTGGTGATTGTTTGGCGTTTATGTATTACAGGCTTAGTAGAGAGTACAATAATCCATCGGAGCCGAGAACGGTGGCTTTGGAGGATGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAAGGGAAAGGAGACGGGGAGGAAGGGGATGAAGAGGAAATCGGAGCGGCAGTTAGGGTTCCGGTGGTGCGGATGAAGATCGGGGAAGTTGCGGAGGCGACGACGGTGGTGATGATGCCGGTGTGCAAGGCAGGGGAGGGGGAAAAGGGAGTTGGAGAAGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTTGGGGTTGTGGTGGTGGAAAAGGAGTGGAGAAGGTGGGTGGTGCTGCCAGGGTGGGAGCCGGTGGCGGGGTTGATGAAGGGCGGCGGTGTAGTGGTGGCGTTTGAGGATGCGAGGGCTCTGCCATGGCGGGTGAACAGGTGGTACAAGGAGGAGCCGATTCTGGTAGTGGCTGATCGGAATAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTATCTGACGGGAGGCACCGTGGGCGGCGGTGGGGAGTTGAAGGTGGAGAGGGGAAATGCATTGATGGAAATGGGAGTGAAGGAGAGTTTGGGGACTGTATTATTGGTGGTTAGGCCACCAAAGGAGATGGAAGATGATCAGTTGAGTGATGAAGATTGGGATTGA

mRNA sequence

ATGCTCTCCACCACCACCACCGCCAACTCTCTCACTTCTCTCTCAGCCGCCGCCCACACCACCGCCACCTTCCTCCATCCTCCACGAGGCTCCCCTCTCCACCTCTTCCTCCGCCGCCGTCCAAAGCCCATTTCCGCCATTATAAACCCTTTCCCTCCCCCCTTAGCCGCAAAGCAACAAGTCTACCAGCCATTCCGGCCCCCTCCCTCTCCTCTCCCCTCTCAATACCGCTCCCTTGACGCCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGATTCAAGAAGGCTTCACTCCTCCCACTCTAGAGGAAATCACCGGAATCAGCGGTGTCCAACAGAATATCTTCGTCGTCGGCGCTCAGGTTCGCGAATCCCTAGTCCAGTCCAACAACTCCGATCCAGATGTAATCGCCGCCTTCGATACCAGCGGCGCCGAGTTGCTCTATGAACTTCGCCTCGTAAGTACCGAGAAACGCGCCGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCGCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAGAGGGGATAAAGGTTGGGAGTGTTTCGATTACGATTCTCCTGGTGATTGTTTGGCGTTTATGTATTACAGGCTTAGTAGAGAGTACAATAATCCATCGGAGCCGAGAACGGTGGCTTTGGAGGATGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAAGGGAAAGGAGACGGGGAGGAAGGGGATGAAGAGGAAATCGGAGCGGCAGTTAGGGTTCCGGTGGTGCGGATGAAGATCGGGGAAGTTGCGGAGGCGACGACGGTGGTGATGATGCCGGTGTGCAAGGCAGGGGAGGGGGAAAAGGGAGTTGGAGAAGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTTGGGGTTGTGGTGGTGGAAAAGGAGTGGAGAAGGTGGGTGGTGCTGCCAGGGTGGGAGCCGGTGGCGGGGTTGATGAAGGGCGGCGGTGTAGTGGTGGCGTTTGAGGATGCGAGGGCTCTGCCATGGCGGGTGAACAGGTGGTACAAGGAGGAGCCGATTCTGGTAGTGGCTGATCGGAATAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTATCTGACGGGAGGCACCGTGGGCGGCGGTGGGGAGTTGAAGGTGGAGAGGGGAAATGCATTGATGGAAATGGGAGTGAAGGAGAGTTTGGGGACTGTATTATTGGTGGTTAGGCCACCAAAGGAGATGGAAGATGATCAGTTGAGTGATGAAGATTGGGATTGA

Coding sequence (CDS)

ATGCTCTCCACCACCACCACCGCCAACTCTCTCACTTCTCTCTCAGCCGCCGCCCACACCACCGCCACCTTCCTCCATCCTCCACGAGGCTCCCCTCTCCACCTCTTCCTCCGCCGCCGTCCAAAGCCCATTTCCGCCATTATAAACCCTTTCCCTCCCCCCTTAGCCGCAAAGCAACAAGTCTACCAGCCATTCCGGCCCCCTCCCTCTCCTCTCCCCTCTCAATACCGCTCCCTTGACGCCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGATTCAAGAAGGCTTCACTCCTCCCACTCTAGAGGAAATCACCGGAATCAGCGGTGTCCAACAGAATATCTTCGTCGTCGGCGCTCAGGTTCGCGAATCCCTAGTCCAGTCCAACAACTCCGATCCAGATGTAATCGCCGCCTTCGATACCAGCGGCGCCGAGTTGCTCTATGAACTTCGCCTCGTAAGTACCGAGAAACGCGCCGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCGCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAGAGGGGATAAAGGTTGGGAGTGTTTCGATTACGATTCTCCTGGTGATTGTTTGGCGTTTATGTATTACAGGCTTAGTAGAGAGTACAATAATCCATCGGAGCCGAGAACGGTGGCTTTGGAGGATGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAAGGGAAAGGAGACGGGGAGGAAGGGGATGAAGAGGAAATCGGAGCGGCAGTTAGGGTTCCGGTGGTGCGGATGAAGATCGGGGAAGTTGCGGAGGCGACGACGGTGGTGATGATGCCGGTGTGCAAGGCAGGGGAGGGGGAAAAGGGAGTTGGAGAAGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTTGGGGTTGTGGTGGTGGAAAAGGAGTGGAGAAGGTGGGTGGTGCTGCCAGGGTGGGAGCCGGTGGCGGGGTTGATGAAGGGCGGCGGTGTAGTGGTGGCGTTTGAGGATGCGAGGGCTCTGCCATGGCGGGTGAACAGGTGGTACAAGGAGGAGCCGATTCTGGTAGTGGCTGATCGGAATAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTATCTGACGGGAGGCACCGTGGGCGGCGGTGGGGAGTTGAAGGTGGAGAGGGGAAATGCATTGATGGAAATGGGAGTGAAGGAGAGTTTGGGGACTGTATTATTGGTGGTTAGGCCACCAAAGGAGATGGAAGATGATCAGTTGAGTGATGAAGATTGGGATTGA

Protein sequence

MLSTTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD
Homology
[Close]
BLAST of Lsi06G007970 vs. Swiss-Prot
Match: RAF1_ARATH (Rubisco accumulation factor 1, chloroplastic OS=Arabidopsis thaliana GN=RAF1 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 9.5e-125
Identity = 250/449 (55.68%), Postives = 321/449 (71.49%), Query Frame = 1 

Query: 11  LTSLSAAAHTTATFLHPPRGSPLHLFLRRRP---KPISAIINPFPPP----LAAKQQVYQ 70
           + SL+A   +++ F      S  H F   RP   KP + I +   P        KQQ+YQ
Sbjct: 1   MLSLTATTLSSSIFTQ----SKTHGFFNTRPVYRKPFTTITSALIPASNRQAPPKQQLYQ 60

Query: 71  PFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISG 130
           PFRPPPSP+P ++RSLD  GK+ VL++RLGLWFEYAPLISSL  EGFTPP++EE+TGISG
Sbjct: 61  PFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISG 120

Query: 131 VQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENR 190
           V+QN  +VGAQVR+SLVQS  + P++IAAFDT+GAELLYE+RL++T +R AAA+YIV++ 
Sbjct: 121 VEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHG 180

Query: 191 LDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALE 250
            D+KGA DLARA+KDFP RRGD G   FDY+ PGDCL+FM YR SRE+ +PSE RT  LE
Sbjct: 181 FDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLE 240

Query: 251 DALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPV 310
            AL+  VTEKA+  ++ +L G+ + E   EEEI   +RVPVVR++ GEVA A++VV++PV
Sbjct: 241 QALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVVVLPV 300

Query: 311 CKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDA 370
           CKA EGE+ + EAPME  S GEFGVV  EK+W RWVVLPGW+PV  + K  GV V+F D 
Sbjct: 301 CKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVSFSDD 360

Query: 371 R-ALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 430
           R  LPW      K E I+VV DR +K V A +G+Y     V   G +K++RG  L E GV
Sbjct: 361 REVLPWN----GKGEAIMVVIDREKKTVEADNGYYY---LVVADGGMKLDRGLVLKEKGV 420

Query: 431 KESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
            ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 NESLGMVVLVVRPPRDDDDEWQINDEDWD 434

[Close]
BLAST of Lsi06G007970 vs. Swiss-Prot
Match: RAF2_ARATH (Rubisco accumulation factor 2, chloroplastic OS=Arabidopsis thaliana GN=RAF2 PE=1 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-123
Identity = 237/415 (57.11%), Postives = 307/415 (73.98%), Query Frame = 1 

Query: 41  PKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAP 100
           PK  SA + P  PP  A+QQ+YQPFRPP SP+P+Q+RSLD+ GK+ +L+ R+ LWFEYAP
Sbjct: 46  PKRSSANMIPKNPP--ARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAP 105

Query: 101 LISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAEL 160
           LISSL  +GFTPPT+EE+TGIS ++QN  +VGAQVR+S++QS + +P++I+AFDT GAEL
Sbjct: 106 LISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQSIH-EPELISAFDTGGAEL 165

Query: 161 LYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCL 220
           LYE+RL+ST +R AAA +I++  +DSKGAQDLARA+KD+P RRGD GW  FDY+ PGDCL
Sbjct: 166 LYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCL 225

Query: 221 AFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDL----IVGDLEGKGDGEEGDEEEI 280
           +F+YYR SRE  NPS+ RT  L  AL V  +EKA++     + GD E + + E+  +EE 
Sbjct: 226 SFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEE 285

Query: 281 GAAVRVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWR 340
             A+R+PVVR+K GEVAEAT+VV++PVCKA EGEK + EAPME+ + G+F VV  EK W+
Sbjct: 286 VKAIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWK 345

Query: 341 RWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGF 400
           RWVVLP W PVA + KGG  V   +D + LPW      KEEP+LVVADR R  V A DG+
Sbjct: 346 RWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGY 405

Query: 401 YLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
           YL     G    LK+E+G+ L    VKESLG V+LVVRPP+E +DD Q S ++WD
Sbjct: 406 YLVVAENG----LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449

[Close]
BLAST of Lsi06G007970 vs. Swiss-Prot
Match: RAF1_ORYSJ (Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=RAF1 PE=2 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.3e-97
Identity = 213/443 (48.08%), Postives = 284/443 (64.11%), Query Frame = 1 

Query: 20  TTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSL 79
           TT+  +  P G P+    R    P +      PPP A   Q+YQPF PPPSPLP +Y+ L
Sbjct: 44  TTSAVILGPDGRPIGGGPRDNKLPFT------PPPTAPPDQLYQPFHPPPSPLPDKYKDL 103

Query: 80  DAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESL 139
           D   +L VL +RLGLW EYAPLIS+L +EGFTP ++EE TGISGV+QN  VV  QVR+SL
Sbjct: 104 DLGQRLAVLRDRLGLWHEYAPLISALSREGFTPSSIEEATGISGVEQNSVVVATQVRDSL 163

Query: 140 VQSNNSDP-DVIAAFDT-SGAELLYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMK 199
           V      P +++  FD+  G ELLYELR ++  +RA AA++ ++ RL+ +G ++LAR+MK
Sbjct: 164 VADEGGFPAELLRYFDSYGGPELLYELRFLNARQRADAARHAIDRRLEPRGVRELARSMK 223

Query: 200 DFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDL 259
           DFP+RRGD GWE F  D+PGDCLAF  +R SRE  + +E     LE AL+VV TE AR  
Sbjct: 224 DFPQRRGDDGWEAFTRDNPGDCLAFARFRQSREAID-AEDSVAELERALEVVDTEPARAR 283

Query: 260 IVGDLE---GKGDGEEGDEEE-----IGAAVR--VPVVRMKIGEVAEATTVVMMPVCKAG 319
           +  +L+    K  GEE D+E+       AA R  VPVVR+  GEVAEATTV+++PV + G
Sbjct: 284 VEAELDRARRKAAGEEVDDEDGAANAAAAASRPAVPVVRLMYGEVAEATTVLLLPVVREG 343

Query: 320 EGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARALP 379
           +G + +  AP   R++ + G+V V+K W RW V+PGW PVA  + G  VV+   D R LP
Sbjct: 344 DGGEALAHAPRRTRTDADLGMVEVDKGWTRWAVVPGWGPVAE-VAGEAVVIELADGRTLP 403

Query: 380 WRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGVKESLG 439
           WR     + E +LVVA+R R+EVV  DG Y+    V   G L VE+G  L   GV E+  
Sbjct: 404 WRS---AEAERVLVVANRGRREVVE-DGIYV----VEREGRLVVEKGRKLAAEGVGEAAA 463

Query: 440 TVLLVVRPPKEMEDDQLSDEDWD 451
            VL+VVRPP++ EDD +SD++WD
Sbjct: 464 EVLVVVRPPRD-EDDMISDDEWD 469

[Close]
BLAST of Lsi06G007970 vs. Swiss-Prot
Match: RAF1_MAIZE (Rubisco accumulation factor 1, chloroplastic OS=Zea mays GN=RAF1 PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.9e-93
Identity = 199/415 (47.95%), Postives = 273/415 (65.78%), Query Frame = 1 

Query: 50  PF-PPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQE 109
           PF PPP+A   Q+YQPF PPPSPLP   R+LD   +L +L +R+GLW EYAPLISSL ++
Sbjct: 60  PFTPPPMAPPGQLYQPFHPPPSPLPPSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRD 119

Query: 110 GFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNS--DPDVIAAFDT-SGAELLYELR 169
           GF P +++E TGISGV+QN  VV +QVR+SL+    +   PD++  FD+  G E+LYELR
Sbjct: 120 GFNPSSIQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELR 179

Query: 170 LVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYY 229
            ++  +RA AA++ +  RL+ KG ++LARAMK FPR RG++GWE F  DSP DCLAF  +
Sbjct: 180 FLNARQRADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARF 239

Query: 230 RLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLE---GKGDG-----EEGDEEEIG 289
           R SRE  +  + R   LE AL+VV TE  R  +  +LE    K  G     EEG+E++  
Sbjct: 240 RQSREAIDVQD-RVAELERALQVVETESGRARVELELERARRKAAGEEEVDEEGEEDDAA 299

Query: 290 AAVR--VPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEW 349
           A++R  V VVR++ GEVAEATTV+++PV +  +G   +  AP   +++   GVV V++ W
Sbjct: 300 ASLRPGVTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAW 359

Query: 350 RRWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDG 409
            RW V+PGW PVA       VVV   D R LPWR++    EEP+LV+A+R++KEVV  +G
Sbjct: 360 ARWAVVPGWGPVAE-AADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEVVE-EG 419

Query: 410 FYLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
            Y+    +   G L VERG  L E G+  +   V++VVRPPK+ EDD +SDE+WD
Sbjct: 420 VYV----LEREGRLVVERGKKLAEQGIAAAAAEVVIVVRPPKD-EDDMVSDEEWD 463

[Close]
BLAST of Lsi06G007970 vs. TrEMBL
Match: A0A0A0LY43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690280 PE=4 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 1.5e-217
Identity = 390/448 (87.05%), Postives = 414/448 (92.41%), Query Frame = 1 

Query: 3   STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
           ST T ANSL+SLS+ AHTT+ FLH PR SPL LFLRRR  PISAIINP    LAAKQQVY
Sbjct: 4   STITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQVY 63

Query: 63  QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
           QPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTPP LEEITGIS
Sbjct: 64  QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGIS 123

Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
           GVQQN F+VGAQVRESL+QSN+SDPDVIA+FDT GAELLYE+RL+STEKRAAAAKYIVEN
Sbjct: 124 GVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 183

Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
           RLDSKGAQDLARAMKDFPRRRGDKGWE FDYD  GDCLA+MYYRLSREYN+ +E RT AL
Sbjct: 184 RLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAAL 243

Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
           E+ALKVVVTEKARDLIVGDLEGKGDG++G EEEIGAAV+VPVVRMKIGEVAEATTVV+MP
Sbjct: 244 EEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVMP 303

Query: 303 VCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
           VCKAGEGEKGVGEAPMEVRSEGEFGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAFED
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFED 363

Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 422
           AR LPWRVNRWYKEEPILVVADR+R+EVVAGDGFYL GG   GGG+LKVERGNALMEMGV
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGG-DGGGDLKVERGNALMEMGV 423

Query: 423 KESLGTVLLVVRPPKEMEDDQLSDEDWD 451
           KESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 424 KESLGTVLLVVRPPRETEDDQLSDEDWD 450

[Close]
BLAST of Lsi06G007970 vs. TrEMBL
Match: W9RQR4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024527 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 7.3e-156
Identity = 283/410 (69.02%), Postives = 336/410 (81.95%), Query Frame = 1 

Query: 42  KPISAII-NPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAP 101
           KPISA   NPFPPP  ++QQ+YQPFRPPPSPLP+Q+RSLD + +L VL++RLGLWFEYAP
Sbjct: 28  KPISATFSNPFPPP--SQQQLYQPFRPPPSPLPNQFRSLDVKSRLEVLADRLGLWFEYAP 87

Query: 102 LISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAEL 161
           LI SLIQEGFTPP+LEE TGISG++QN  VV AQVR+SL+QSN +DP V++AFD  GAEL
Sbjct: 88  LIPSLIQEGFTPPSLEEATGISGIEQNHLVVAAQVRDSLIQSN-TDPAVVSAFDLGGAEL 147

Query: 162 LYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCL 221
           LYE+RL++ ++R+AAA YI  N LD++G QDLAR+++DFPRRRGDKGWE FDY  PGDCL
Sbjct: 148 LYEIRLLNAQQRSAAASYIAANGLDARGVQDLARSVRDFPRRRGDKGWESFDYTQPGDCL 207

Query: 222 AFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAV 281
           AFMY+R SRE+  PSE RT ALE AL   VTE+A+  ++ +L  +G+GE   E EIG  V
Sbjct: 208 AFMYFRQSREHKKPSEQRTAALEQALSAAVTERAKGRVLEELNAEGEGEITGEGEIGEEV 267

Query: 282 RVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVV 341
           RVPVVR+KIGEVAEA+TV ++PVCKAGE +KG+ EAP E  +EGEFGVVV EK W RWVV
Sbjct: 268 RVPVVRLKIGEVAEASTVAVLPVCKAGERDKGLEEAPRECWTEGEFGVVVAEKGWARWVV 327

Query: 342 LPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTG 401
           LP WEPVAGL KGG VVV+F DAR LPWR NRWYKEE ILVVADR+RKEV   +GFYL G
Sbjct: 328 LPAWEPVAGLGKGG-VVVSFSDARVLPWRTNRWYKEEAILVVADRDRKEVSVDNGFYLVG 387

Query: 402 GTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
           G    GG+LKVERG+AL E GV+ESLGTV+LVVRPPK+  DDQLSDEDW+
Sbjct: 388 GD---GGDLKVERGSALKETGVEESLGTVVLVVRPPKDAVDDQLSDEDWE 430

[Close]
BLAST of Lsi06G007970 vs. TrEMBL
Match: M5WAU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005554mg PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-154
Identity = 281/425 (66.12%), Postives = 343/425 (80.71%), Query Frame = 1 

Query: 26  HPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKL 85
           HPP   PL        KPISA + P     + +QQVYQPFRPPPSP+P+++RSLDA G+L
Sbjct: 38  HPP---PLLYPKPSSLKPISATLTPSSS--SQQQQVYQPFRPPPSPVPAKFRSLDANGRL 97

Query: 86  NVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNS 145
            +L+NRLGLW+E+APLI SL+QEGFTPPT+EE+TGISGV+QN  VV AQVR+SLVQS  +
Sbjct: 98  EILANRLGLWYEFAPLIPSLLQEGFTPPTIEEVTGISGVEQNRLVVAAQVRDSLVQSK-T 157

Query: 146 DPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGD 205
           DP ++A FDT G+ELLYE+RL+S ++RAAAA+YI+EN+LD+KG QDLAR+MKDFPRRRGD
Sbjct: 158 DPKILAEFDTGGSELLYEIRLLSVQQRAAAARYIIENKLDAKGTQDLARSMKDFPRRRGD 217

Query: 206 KGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLEGK 265
           KGWE FDY  PGDCL F+YYR +RE+ NPSEPRT ALE ALKV  T+KA+ +I+ DLEG+
Sbjct: 218 KGWESFDYAHPGDCLGFIYYRQAREHKNPSEPRTAALEQALKVAGTDKAKKIILTDLEGE 277

Query: 266 GDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGE 325
            D +EG E ++   VRVPVVR+K GEVAE++ VV++PVC+A E +K V EAP E  SEGE
Sbjct: 278 TDEKEGREGDVIDVVRVPVVRLKFGEVAESSKVVILPVCRADEKDKEVLEAPWECSSEGE 337

Query: 326 FGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADR 385
           FGVVV EK W+RWVVLPGWEPV GL KGG VVV+F DAR LPW+VNRWYKEEPIL+VADR
Sbjct: 338 FGVVVAEKGWKRWVVLPGWEPVVGLGKGG-VVVSFSDARVLPWKVNRWYKEEPILLVADR 397

Query: 386 NRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLS 445
           ++KEV A DGFYL     GGG   KV RG+AL E GVKESLGTV+++VRPP++  DDQLS
Sbjct: 398 SKKEVTADDGFYLAA-VEGGGLGFKVVRGSALKETGVKESLGTVVMIVRPPRDETDDQLS 454

Query: 446 DEDWD 451
           +EDW+
Sbjct: 458 EEDWE 454

[Close]
BLAST of Lsi06G007970 vs. TrEMBL
Match: B9S7J3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0608630 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 3.2e-151
Identity = 281/412 (68.20%), Postives = 334/412 (81.07%), Query Frame = 1 

Query: 42  KPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPL 101
           KPISA + P  PP  + QQ+YQPFRPPPSP+PSQ+ SLD  G+L VL+NRLGLW+EYAPL
Sbjct: 43  KPISAALIPSTPP-PSNQQLYQPFRPPPSPIPSQFSSLDTAGRLEVLANRLGLWYEYAPL 102

Query: 102 ISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELL 161
           I SLIQEGF+PP++EE TGISGV+QN  VV A+VRESL QS  +  ++++ FDT GAELL
Sbjct: 103 IPSLIQEGFSPPSIEESTGISGVEQNRLVVAAKVRESLTQSQTA-AEIVSEFDTGGAELL 162

Query: 162 YELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLA 221
           YE+RL+S  +RAAAA++IVENRLD+KGA+DLARAMKDFPRRRGDKGWE FDY  PGDCL+
Sbjct: 163 YEIRLLSAPQRAAAARFIVENRLDAKGAEDLARAMKDFPRRRGDKGWESFDYTLPGDCLS 222

Query: 222 FMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVR 281
           FMYYR SRE+  PSEPRT ALE AL V  +EKA++ ++ +LEG  +G+E  E E+G A R
Sbjct: 223 FMYYRQSREHKTPSEPRTNALERALDVAESEKAKNEVLKELEGDSEGKEEKEGEVGDATR 282

Query: 282 VPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVL 341
           VPVVR++IGEVAEAT+VV++PVC+A + EK + EAP E +SEGEFGVVV EK W RWVVL
Sbjct: 283 VPVVRLRIGEVAEATSVVVLPVCRALQKEKEIWEAPWECKSEGEFGVVVAEKGWERWVVL 342

Query: 342 PGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLT-- 401
           PGWEPV GL K GGVVVAF DARALPW+VNRWYKEE ILVVADR  KEV A DGFYL   
Sbjct: 343 PGWEPVVGLEK-GGVVVAFPDARALPWKVNRWYKEEAILVVADRGSKEVNANDGFYLVAV 402

Query: 402 -GGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
            G   G  G L+VERG+ L E GV+ESLGTV+LVVRPPKE + DQLSDE+W+
Sbjct: 403 DGSGDGRSGGLEVERGSILKERGVEESLGTVVLVVRPPKE-QTDQLSDENWE 450

[Close]
BLAST of Lsi06G007970 vs. TrEMBL
Match: A0A067JUQ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23533 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 8.6e-149
Identity = 276/434 (63.59%), Postives = 340/434 (78.34%), Query Frame = 1 

Query: 21  TATFLHPPRGSPLHLFLRRRPK----PISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQY 80
           +++FL P    PL +F    PK    PISA + P  PP  A QQ+YQPFRPPP+ LP QY
Sbjct: 23  SSSFLSP--NPPLFIFHLPSPKIHLKPISATLIPSSPPPPASQQLYQPFRPPPNTLPPQY 82

Query: 81  RSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVR 140
           +SLDA G+L +L+NRLGLW+EYAPLI+SLI+EGF+P ++EE TGISGV+QN  VV AQVR
Sbjct: 83  QSLDAAGRLEILANRLGLWYEYAPLITSLIREGFSPTSIEESTGISGVEQNRLVVAAQVR 142

Query: 141 ESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAM 200
           ESL+QS  +DP+++A FDT GAELLYE+RL+S  +RAAAA+++++++LD+KGAQDLARAM
Sbjct: 143 ESLIQSK-TDPEIVAEFDTGGAELLYEIRLLSVSQRAAAARFLIQHKLDAKGAQDLARAM 202

Query: 201 KDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARD 260
           KDFPRRRGDK WE FDY  PGDCL+FMYYR SRE+ + SE RT ALE AL V  +EKA++
Sbjct: 203 KDFPRRRGDKAWEDFDYTLPGDCLSFMYYRQSREHKDLSEQRTNALEMALDVAESEKAKN 262

Query: 261 LIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEA 320
            I+ +L+G  + ++G+E E+  +VRVPVVR+K+GEVAEA+ VV++PVC+A + EK + EA
Sbjct: 263 SILKELQGDSEDKDGEEGEMADSVRVPVVRLKLGEVAEASNVVVLPVCRAEQIEKEILEA 322

Query: 321 PMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKE 380
           P E R+EGEFGVVV EK W RWVVLP WEPV GL K GGVVVAF DAR LPW+VNRWYKE
Sbjct: 323 PWECRTEGEFGVVVAEKGWERWVVLPAWEPVVGLGK-GGVVVAFPDARVLPWKVNRWYKE 382

Query: 381 EPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPP 440
           E +LVVADR RKEV   DGFYL      G G LKVERG+AL   GV+ SLGTV+ VVRPP
Sbjct: 383 EAVLVVADRGRKEVTIDDGFYLVAVDGSGDGGLKVERGSALKAKGVEVSLGTVVTVVRPP 442

Query: 441 KEMEDDQLSDEDWD 451
           KE  DDQL DEDW+
Sbjct: 443 KEETDDQLRDEDWE 452

[Close]
BLAST of Lsi06G007970 vs. TAIR10
Match: AT5G28500.1 (AT5G28500.1 unknown protein)

HSP 1 Score: 448.4 bits (1152), Expect = 5.4e-126
Identity = 250/449 (55.68%), Postives = 321/449 (71.49%), Query Frame = 1 

Query: 11  LTSLSAAAHTTATFLHPPRGSPLHLFLRRRP---KPISAIINPFPPP----LAAKQQVYQ 70
           + SL+A   +++ F      S  H F   RP   KP + I +   P        KQQ+YQ
Sbjct: 1   MLSLTATTLSSSIFTQ----SKTHGFFNTRPVYRKPFTTITSALIPASNRQAPPKQQLYQ 60

Query: 71  PFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISG 130
           PFRPPPSP+P ++RSLD  GK+ VL++RLGLWFEYAPLISSL  EGFTPP++EE+TGISG
Sbjct: 61  PFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISG 120

Query: 131 VQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENR 190
           V+QN  +VGAQVR+SLVQS  + P++IAAFDT+GAELLYE+RL++T +R AAA+YIV++ 
Sbjct: 121 VEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHG 180

Query: 191 LDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALE 250
            D+KGA DLARA+KDFP RRGD G   FDY+ PGDCL+FM YR SRE+ +PSE RT  LE
Sbjct: 181 FDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLE 240

Query: 251 DALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPV 310
            AL+  VTEKA+  ++ +L G+ + E   EEEI   +RVPVVR++ GEVA A++VV++PV
Sbjct: 241 QALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVVVLPV 300

Query: 311 CKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDA 370
           CKA EGE+ + EAPME  S GEFGVV  EK+W RWVVLPGW+PV  + K  GV V+F D 
Sbjct: 301 CKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVSFSDD 360

Query: 371 R-ALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 430
           R  LPW      K E I+VV DR +K V A +G+Y     V   G +K++RG  L E GV
Sbjct: 361 REVLPWN----GKGEAIMVVIDREKKTVEADNGYYY---LVVADGGMKLDRGLVLKEKGV 420

Query: 431 KESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
            ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 NESLGMVVLVVRPPRDDDDEWQINDEDWD 434

[Close]
BLAST of Lsi06G007970 vs. TAIR10
Match: AT3G04550.1 (AT3G04550.1 unknown protein)

HSP 1 Score: 444.9 bits (1143), Expect = 5.9e-125
Identity = 237/415 (57.11%), Postives = 307/415 (73.98%), Query Frame = 1 

Query: 41  PKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAP 100
           PK  SA + P  PP  A+QQ+YQPFRPP SP+P+Q+RSLD+ GK+ +L+ R+ LWFEYAP
Sbjct: 46  PKRSSANMIPKNPP--ARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAP 105

Query: 101 LISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAEL 160
           LISSL  +GFTPPT+EE+TGIS ++QN  +VGAQVR+S++QS + +P++I+AFDT GAEL
Sbjct: 106 LISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQSIH-EPELISAFDTGGAEL 165

Query: 161 LYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCL 220
           LYE+RL+ST +R AAA +I++  +DSKGAQDLARA+KD+P RRGD GW  FDY+ PGDCL
Sbjct: 166 LYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCL 225

Query: 221 AFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDL----IVGDLEGKGDGEEGDEEEI 280
           +F+YYR SRE  NPS+ RT  L  AL V  +EKA++     + GD E + + E+  +EE 
Sbjct: 226 SFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEE 285

Query: 281 GAAVRVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWR 340
             A+R+PVVR+K GEVAEAT+VV++PVCKA EGEK + EAPME+ + G+F VV  EK W+
Sbjct: 286 VKAIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWK 345

Query: 341 RWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGF 400
           RWVVLP W PVA + KGG  V   +D + LPW      KEEP+LVVADR R  V A DG+
Sbjct: 346 RWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGY 405

Query: 401 YLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
           YL     G    LK+E+G+ L    VKESLG V+LVVRPP+E +DD Q S ++WD
Sbjct: 406 YLVVAENG----LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449

[Close]
BLAST of Lsi06G007970 vs. NCBI nr
Match: gi|659125493|ref|XP_008462710.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo])

HSP 1 Score: 773.9 bits (1997), Expect = 1.6e-220
Identity = 395/451 (87.58%), Postives = 417/451 (92.46%), Query Frame = 1 

Query: 3   STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
           ST T ANSLTSLS+ AHTTA FLH P  SPL LFLRRR  PISAIINP P PLAAKQQVY
Sbjct: 4   STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63

Query: 63  QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
           QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWF+YAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64  QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEITGIS 123

Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
           GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183

Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
           RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243

Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
           E+ALKVVVTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303

Query: 303 VCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
           VCKAGEGEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363

Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
           AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG   GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423

Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
           MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

[Close]
BLAST of Lsi06G007970 vs. NCBI nr
Match: gi|449449643|ref|XP_004142574.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 763.5 bits (1970), Expect = 2.1e-217
Identity = 390/448 (87.05%), Postives = 414/448 (92.41%), Query Frame = 1 

Query: 3   STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
           ST T ANSL+SLS+ AHTT+ FLH PR SPL LFLRRR  PISAIINP    LAAKQQVY
Sbjct: 4   STITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQVY 63

Query: 63  QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
           QPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTPP LEEITGIS
Sbjct: 64  QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGIS 123

Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
           GVQQN F+VGAQVRESL+QSN+SDPDVIA+FDT GAELLYE+RL+STEKRAAAAKYIVEN
Sbjct: 124 GVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 183

Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
           RLDSKGAQDLARAMKDFPRRRGDKGWE FDYD  GDCLA+MYYRLSREYN+ +E RT AL
Sbjct: 184 RLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAAL 243

Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
           E+ALKVVVTEKARDLIVGDLEGKGDG++G EEEIGAAV+VPVVRMKIGEVAEATTVV+MP
Sbjct: 244 EEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVMP 303

Query: 303 VCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
           VCKAGEGEKGVGEAPMEVRSEGEFGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAFED
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFED 363

Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 422
           AR LPWRVNRWYKEEPILVVADR+R+EVVAGDGFYL GG   GGG+LKVERGNALMEMGV
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGG-DGGGDLKVERGNALMEMGV 423

Query: 423 KESLGTVLLVVRPPKEMEDDQLSDEDWD 451
           KESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 424 KESLGTVLLVVRPPRETEDDQLSDEDWD 450

[Close]
BLAST of Lsi06G007970 vs. NCBI nr
Match: gi|703121088|ref|XP_010102246.1| (hypothetical protein L484_024527 [Morus notabilis])

HSP 1 Score: 558.5 bits (1438), Expect = 1.0e-155
Identity = 283/410 (69.02%), Postives = 336/410 (81.95%), Query Frame = 1 

Query: 42  KPISAII-NPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAP 101
           KPISA   NPFPPP  ++QQ+YQPFRPPPSPLP+Q+RSLD + +L VL++RLGLWFEYAP
Sbjct: 28  KPISATFSNPFPPP--SQQQLYQPFRPPPSPLPNQFRSLDVKSRLEVLADRLGLWFEYAP 87

Query: 102 LISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAEL 161
           LI SLIQEGFTPP+LEE TGISG++QN  VV AQVR+SL+QSN +DP V++AFD  GAEL
Sbjct: 88  LIPSLIQEGFTPPSLEEATGISGIEQNHLVVAAQVRDSLIQSN-TDPAVVSAFDLGGAEL 147

Query: 162 LYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCL 221
           LYE+RL++ ++R+AAA YI  N LD++G QDLAR+++DFPRRRGDKGWE FDY  PGDCL
Sbjct: 148 LYEIRLLNAQQRSAAASYIAANGLDARGVQDLARSVRDFPRRRGDKGWESFDYTQPGDCL 207

Query: 222 AFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAV 281
           AFMY+R SRE+  PSE RT ALE AL   VTE+A+  ++ +L  +G+GE   E EIG  V
Sbjct: 208 AFMYFRQSREHKKPSEQRTAALEQALSAAVTERAKGRVLEELNAEGEGEITGEGEIGEEV 267

Query: 282 RVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVV 341
           RVPVVR+KIGEVAEA+TV ++PVCKAGE +KG+ EAP E  +EGEFGVVV EK W RWVV
Sbjct: 268 RVPVVRLKIGEVAEASTVAVLPVCKAGERDKGLEEAPRECWTEGEFGVVVAEKGWARWVV 327

Query: 342 LPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTG 401
           LP WEPVAGL KGG VVV+F DAR LPWR NRWYKEE ILVVADR+RKEV   +GFYL G
Sbjct: 328 LPAWEPVAGLGKGG-VVVSFSDARVLPWRTNRWYKEEAILVVADRDRKEVSVDNGFYLVG 387

Query: 402 GTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
           G    GG+LKVERG+AL E GV+ESLGTV+LVVRPPK+  DDQLSDEDW+
Sbjct: 388 GD---GGDLKVERGSALKETGVEESLGTVVLVVRPPKDAVDDQLSDEDWE 430

[Close]
BLAST of Lsi06G007970 vs. NCBI nr
Match: gi|595824052|ref|XP_007205174.1| (hypothetical protein PRUPE_ppa005554mg [Prunus persica])

HSP 1 Score: 554.7 bits (1428), Expect = 1.5e-154
Identity = 281/425 (66.12%), Postives = 343/425 (80.71%), Query Frame = 1 

Query: 26  HPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKL 85
           HPP   PL        KPISA + P     + +QQVYQPFRPPPSP+P+++RSLDA G+L
Sbjct: 38  HPP---PLLYPKPSSLKPISATLTPSSS--SQQQQVYQPFRPPPSPVPAKFRSLDANGRL 97

Query: 86  NVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNS 145
            +L+NRLGLW+E+APLI SL+QEGFTPPT+EE+TGISGV+QN  VV AQVR+SLVQS  +
Sbjct: 98  EILANRLGLWYEFAPLIPSLLQEGFTPPTIEEVTGISGVEQNRLVVAAQVRDSLVQSK-T 157

Query: 146 DPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGD 205
           DP ++A FDT G+ELLYE+RL+S ++RAAAA+YI+EN+LD+KG QDLAR+MKDFPRRRGD
Sbjct: 158 DPKILAEFDTGGSELLYEIRLLSVQQRAAAARYIIENKLDAKGTQDLARSMKDFPRRRGD 217

Query: 206 KGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLEGK 265
           KGWE FDY  PGDCL F+YYR +RE+ NPSEPRT ALE ALKV  T+KA+ +I+ DLEG+
Sbjct: 218 KGWESFDYAHPGDCLGFIYYRQAREHKNPSEPRTAALEQALKVAGTDKAKKIILTDLEGE 277

Query: 266 GDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPVCKAGEGEKGVGEAPMEVRSEGE 325
            D +EG E ++   VRVPVVR+K GEVAE++ VV++PVC+A E +K V EAP E  SEGE
Sbjct: 278 TDEKEGREGDVIDVVRVPVVRLKFGEVAESSKVVILPVCRADEKDKEVLEAPWECSSEGE 337

Query: 326 FGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADR 385
           FGVVV EK W+RWVVLPGWEPV GL KGG VVV+F DAR LPW+VNRWYKEEPIL+VADR
Sbjct: 338 FGVVVAEKGWKRWVVLPGWEPVVGLGKGG-VVVSFSDARVLPWKVNRWYKEEPILLVADR 397

Query: 386 NRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLS 445
           ++KEV A DGFYL     GGG   KV RG+AL E GVKESLGTV+++VRPP++  DDQLS
Sbjct: 398 SKKEVTADDGFYLAA-VEGGGLGFKVVRGSALKETGVKESLGTVVMIVRPPRDETDDQLS 454

Query: 446 DEDWD 451
           +EDW+
Sbjct: 458 EEDWE 454

[Close]
BLAST of Lsi06G007970 vs. NCBI nr
Match: gi|657958419|ref|XP_008370732.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus domestica])

HSP 1 Score: 551.2 bits (1419), Expect = 1.7e-153
Identity = 285/449 (63.47%), Postives = 350/449 (77.95%), Query Frame = 1 

Query: 7   TANSLTSLSAAAHTTA-----TFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQV 66
           T NSL   S+   TT      +FL+P     LH      PKPISA + P       ++QV
Sbjct: 5   TVNSLKPFSSFNPTTTFLSSTSFLNPHPPLLLH-HKPSSPKPISATLTPSSSTQQQQKQV 64

Query: 67  YQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGI 126
           YQPFRPPPSP+PS++RSLDA G+L +L+NRLGLWFEYAPLI SL QEGFTPPT+EEITGI
Sbjct: 65  YQPFRPPPSPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEITGI 124

Query: 127 SGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVE 186
           SGV+QN  VV AQVR+SLVQSN +DP++++ FD  G+ELLYE+RL+S ++RAAA+++I+E
Sbjct: 125 SGVEQNRLVVAAQVRDSLVQSN-TDPEIVSEFDLGGSELLYEIRLLSVQQRAAASRFIIE 184

Query: 187 NRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVA 246
           N+LD KGAQDLAR+MKDFPRRR +KGWE FDY SPGDCL FMY+R  RE+ NPSEPRT A
Sbjct: 185 NKLDGKGAQDLARSMKDFPRRRTEKGWESFDYASPGDCLGFMYFRQGREHKNPSEPRTAA 244

Query: 247 LEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMM 306
           LE ALKV  T+KA+ +I+ +LEG+ + +E +EE++ A VRVPVVR+K GEVAE+T VV++
Sbjct: 245 LEQALKVAQTDKAKKVILKELEGESEDKEEEEEDVAAGVRVPVVRLKFGEVAESTKVVIL 304

Query: 307 PVCKAGEGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFE 366
           PVC+A E +K V EAP E  SEGE GV+V EK W+RWVVLPGWEPV  L K GGVVV+F 
Sbjct: 305 PVCRAEEKDKEVMEAPWECTSEGELGVMVAEKGWKRWVVLPGWEPVVSLGK-GGVVVSFS 364

Query: 367 DARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMG 426
           DAR LPW+ NRWYKEEPILVVADR+++EV A DGFYL     G G   KV RG+AL E G
Sbjct: 365 DARVLPWKANRWYKEEPILVVADRSKREVEADDGFYLAAXD-GEGLGFKVVRGSALKEAG 424

Query: 427 VKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
           V+ESLGTV+L+VRPP++  DDQLSDEDW+
Sbjct: 425 VEESLGTVVLIVRPPRDETDDQLSDEDWE 449

The following BLAST results are available for this feature:
BLAST of Lsi06G007970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAF1_ARATH9.5e-12555.68Rubisco accumulation factor 1, chloroplastic OS=Arabidopsis thaliana GN=RAF1 PE=... [more]
RAF2_ARATH1.1e-12357.11Rubisco accumulation factor 2, chloroplastic OS=Arabidopsis thaliana GN=RAF2 PE=... [more]
RAF1_ORYSJ1.3e-9748.08Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=... [more]
RAF1_MAIZE1.9e-9347.95Rubisco accumulation factor 1, chloroplastic OS=Zea mays GN=RAF1 PE=1 SV=1[more]
BLAST of Lsi06G007970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY43_CUCSA1.5e-21787.05Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690280 PE=4 SV=1[more]
W9RQR4_9ROSA7.3e-15669.02Uncharacterized protein OS=Morus notabilis GN=L484_024527 PE=4 SV=1[more]
M5WAU1_PRUPE1.1e-15466.12Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005554mg PE=4 SV=1[more]
B9S7J3_RICCO3.2e-15168.20Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0608630 PE=4 SV=1[more]
A0A067JUQ5_JATCU8.6e-14963.59Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23533 PE=4 SV=1[more]
BLAST of Lsi06G007970 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G28500.15.4e-12655.68 unknown protein[more]
AT3G04550.15.9e-12557.11 unknown protein[more]
BLAST of Lsi06G007970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125493|ref|XP_008462710.1|1.6e-22087.58PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo][more]
gi|449449643|ref|XP_004142574.1|2.1e-21787.05PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis sativus][more]
gi|703121088|ref|XP_010102246.1|1.0e-15569.02hypothetical protein L484_024527 [Morus notabilis][more]
gi|595824052|ref|XP_007205174.1|1.5e-15466.12hypothetical protein PRUPE_ppa005554mg [Prunus persica][more]
gi|657958419|ref|XP_008370732.1|1.7e-15363.47PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G007970.1Lsi06G007970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35299FAMILY NOT NAMEDcoord: 4..450
score: 2.7E
NoneNo IPR availablePANTHERPTHR35299:SF2RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATEDcoord: 4..450
score: 2.7E