Cucsa.291680 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.291680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Rubisco accumulation factor 1, chloroplastic
Location	scaffold02766 : 221048 .. 225553 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTCTCTTCCCACCATTTCCATTCACCATGCTCTCCTCCACCATCACCAACGCCAACTCTCTCAGTTCTCTCTCCTCCATTGCCCACACCACCTCCATCTTCCTCCATCAACCCAGAGACTCCCCTCTCCGCCTCTTCCTCCGTCGCCGTCTAAACCCCATTTCCGCCATTATTAACCCTTCTTCTTCCTCCTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCCCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATATCCTCTCCAACCGCCTCGGCCTATGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGCTTCAAGAGGGCTTCACTCCTCCTGTTCTAGAAGAAATCACCGGAATTAGCGGTGTTCAGCAGAATAGCTTCATCGTTGGCGCTCAGGTTCGCGAATCCCTACTTCAGTCCAATGACTCCGATCCAGATGTAATCGCCTCCTTCGATACTGGTGGTGCGGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCCCAGGATCTGGCTCGAGCAATGAAGGATTTTCCTCGACGAAGAGGGGACAAAGGTTGGGAGTATTTTGATTACGATTTTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTGAGTAGAGAGTACAATAGTTCAACGGAGAGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAGGGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGCAGTTAAAGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTTGCGGAGGCGACGACAGTGGTGGTGATGCCGGTGTGCAAGGCAGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTACCGGGATGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGTGGACTAGTAGTGGCGTTTGAGGATGCGAGGGTTCTGCCATGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGTAGAAGGGAGGTGGTGGCGGGAGATGGATTTTATCTGATGGGTGGAGGCGATGGAGGTGGGGATTTGAAGGTGGAGAGAGGGAATGCATTGATGGAAATGGGAGTGAAGGAGAGCTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAGGGAGACGGAAGATGATCAATTGAGTGATGAAGATTGGGACTAAACTAAACAGACTCACAACTATTCAGTGTTAGGTATTATTATATTATATTCTACACTTACAAATGTTGTACCATTGATTTTGGTTATTCAATTTTATGTGCTTCAATTCCCACTTCCTTTTCCTCTTTTGTTTCTTTTCTCTTTTCCCTATACACGCATCCGGATTGTAATTTTAACTTTGCTTAATACATCTTCCTAGAGGTGATTTGGTTATAATAATAACTTTGATTTTTCTTTTTTTTATGCGATTACCATCTTATTATTTTTATTTTTTTTCACAATTAGTTAGTTCATTTAATAACCTTGGGACTTTCATGTTATTACTTTTTGTCAATTCAAAAATATCCATATTGATTCATCTTTCGTATGAAATTTGATTGCAATTTAATTGTCTTATTTACTTTTGCATAGTTTTTCCTTCCAATTTAGATTTGATTGCTACGTGATTACCATGAACTTTTATCATGAACTTTTATGTGATATTAATTATTATATGAATATGTGATATTAATTATTATATGATTATTAGTGATATTGATTGTTGTATGATTTCTATCTAATTACCGTATTGTCCTTTTGATTCACATAATTAGTAATTTCTAATATTTTTATTGGAGTTCTATTTTGAACTTCTACTATATTTATCTGATTGTTTAAGATAATTGTAGTTATTTCTGTTCCATTTTAATTCATTGAGGTTGTTGAGAATAATACCCTAAATTGGAGAATAAAAGACCAAAAACAAAAACCTATAAGAATAGAAGACGAAAAAGGAAATCCATCACATTGATACTAATAATGAAATACATCATAACACCAATAATGAAATGCATCATATCTCAATCAAATAGAAATCACAAATTATAATATAGGATGAAAATCACGTAAAATTAGATATCAATCAAATAGAAATTATACCTGAAATACAAGCACAGCTAGAAAAACAACCTCTCTTAATATTTGCATTTTGCAATTTCAAATACTTGACGTTTTTAATAAAAATAAAAACATCAAGTAATTGATGATTTTTAACAAAACTTAAATAATTTTTAAAAAAACACGAAGATGAGACGATTTTTCAGATATTTTCCATGCTACTATTTACTCGATGTTTTAACAACATAGTTGAATCTATATTTTCTTGTCATTTTTCAAATGTGATATTTTTATGAAAACATAAATGATTTTTTTAATTTAATTTTTTTTGTTTCCCTCCCTCATTTTCACTTCCCTCTCAAAATGCAAAAAGAAAAAGTTTAGCAAACCCTACTCTTCTCCTCCTCTCCCTCTATTTTCATGATAGAAAGTATCTATAGAATCCAAAACTTTTGATTTTTAAAAATGTCCCTTTTCAAAAAATTGTTAATTTTTTAATATAACTCCACATTGACGTGGTACTTACGGACTAACATGGTGCTGATTTAAATTGTTAATCCAATCTACAGGGATCACCCAAAGAAACATTAGCTTCAATTGAAAGGGGAAATTCTACTTCAGCTCTCAGTTATCTGCCCACAATCTTCAATCACAACTGGAACCTTAGGGTCCCCCGATTCTGTACCCTTCTCATTCATCTTCTCCACCACATCATAACCATCCACAACTTTGCCAAACACAACATGCTTCCCATCAAGCCATGACAATGGCCCCGAAGTGGAAATGAAGAACTGAGAACCATTGGTGTTTGGTCCAGCATTCGCCATTGATACCATACCTGGTCCAGTGTGTTTCAACTTAAAGTTTTCATCTGCAAATTTCAAGCCATAGATTGATTCTCCTCCTGTTCCATTAGACTTTGTGAAATCTCCTCCTTGGCACATGAAATCTGGAATTATACGGTGAAATTTTGAGCCTTTATAGTGCAGTGGTTTCCCAGATCTTCCAATCCCCTTCTCTCCCGTGCAGAGGGCTCGGAAATTCTCAGCGGTTTTTGGAGTTGTGTCTGCAAATAACTCCATGACAATCCGGCCTGCTTTCACCCTCCCAATCAGAATGTCCAAGAAAACTTTTGGGTTGGTCATTGCTCTCTTCTCTTCTACTGCTCCCAAACTTCAAATTGGTTTCTGTCAAATTACAATCTTCAGCTTTTTCCATCCTTAACAAATCACTCGATAGAAAGTAAAAACAACACGTTTGCTTTTTTTTTCACAATTAGAGATTCTTCAAAAGATAATTATTAAAATATAATTAGAAAATAGCACGGTTAAATGACAATCCTACTATATACAAACAACTTGAGATAATCATGCTTTTCGAGTAAAACCACACTTGAAAACGGTGGCCATAAGATTAACTTGAAGGAGTGTCTCAAAGATCCAATTTTCAGATTAGAATTTTCAGCCCCGATTAACTTCAAAACCGTCTTCTACACTAAACATCAGTCAATAGAAAGCAAAGCATGCTTATTTTGATAATTAAGGATTATTCAAAAGGCATTCAAATAAATAATACTCGAAATTACTTTACGTTGTGTCTCAAACAAAATTTTCAGCAAATACTTCAGATCTGATTTATTTGAAACACAATCCTTAACACCCCATTACCCAGAAAATAACCCTATTGCTTGTCATTACTTTACAAATGACCTCCATATAGTTTTCGACAGCGTATTTTCTAATACCAAAGATCCGAAATTATAGTATTCATGTCAACAATACAAAACACTTAAAGTAATCTACAGATAAACCAGCATGCAATTCATCACACTCTCAAGAGACTTAAGTAATCTGAATCACATCGACAAGCATAAGCAGTGGGGGAAAAAAGACAGAAAAACTAAAAAGCAGAAACAATTAATAGAAATATCAATACAATTCCAACTCTGGCAAAGAATAAGAAAATAGAAAATCCCCCAATCAAAGAAGGGTGAAAGATGTATCAGAAAATGTTCGTCATCACTCTCAAATCCCGTAGAGGGCGGACACGAAATCGGTCGATAGACTGAAAAGAACGTGCTAAGAGAGCAAAAGACGATGAAATAATATGGCACAAGTATTGAGCTCAGCAGGCATTTATACAATGAACCTGAAAGCCTTCGATATGTGCAATTGCAGAACGAAGAGTTCTCAAATTCGCTTGAGTAGAGAAGAAATCAATGATGAAGAAAGAATCTACCTTTGAGGAAG

mRNA sequence

CTCCTCTCTTCCCACCATTTCCATTCACCATGCTCTCCTCCACCATCACCAACGCCAACTCTCTCAGTTCTCTCTCCTCCATTGCCCACACCACCTCCATCTTCCTCCATCAACCCAGAGACTCCCCTCTCCGCCTCTTCCTCCGTCGCCGTCTAAACCCCATTTCCGCCATTATTAACCCTTCTTCTTCCTCCTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCCCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATATCCTCTCCAACCGCCTCGGCCTATGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGCTTCAAGAGGGCTTCACTCCTCCTGTTCTAGAAGAAATCACCGGAATTAGCGGTGTTCAGCAGAATAGCTTCATCGTTGGCGCTCAGGTTCGCGAATCCCTACTTCAGTCCAATGACTCCGATCCAGATGTAATCGCCTCCTTCGATACTGGTGGTGCGGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCCCAGGATCTGGCTCGAGCAATGAAGGATTTTCCTCGACGAAGAGGGGACAAAGGTTGGGAGTATTTTGATTACGATTTTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTGAGTAGAGAGTACAATAGTTCAACGGAGAGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAGGGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGCAGTTAAAGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTTGCGGAGGCGACGACAGTGGTGGTGATGCCGGTGTGCAAGGCAGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTACCGGGATGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGTGGACTAGTAGTGGCGTTTGAGGATGCGAGGGTTCTGCCATGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGTAGAAGGGAGGTGGTGGCGGGAGATGGATTTTATCTGATGGGTGGAGGCGATGGAGGTGGGGATTTGAAGGTGGAGAGAGGGAATGCATTGATGGAAATGGGAGTGAAGGAGAGCTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAGGGAGACGGAAGATGATCAATTGAGTGATGAAGATTGGGACTAAACTAAACAGACTCACAACTATTCAGTGTTAGGGATCACCCAAAGAAACATTAGCTTCAATTGAAAGGGGAAATTCTACTTCAGCTCTCAGTTATCTGCCCACAATCTTCAATCACAACTGGAACCTTAGGGTCCCCCGATTCTGTACCCTTCTCATTCATCTTCTCCACCACATCATAACCATCCACAACTTTGCCAAACACAACATGCTTCCCATCAAGCCATGACAATGGCCCCGAAGTGGAAATGAAGAACTGAGAACCATTGGTGTTTGGTCCAGCATTCGCCATTGATACCATACCTGGTCCAGTGTGTTTCAACTTAAAGTTTTCATCTGCAAATTTCAAGCCATAGATTGATTCTCCTCCTGTTCCATTAGACTTTGTGAAATCTCCTCCTTGGCACATGAAATCTGGAATTATACGGTGAAATTTTGAGCCTTTATAGTGCAGTGGTTTCCCAGATCTTCCAATCCCCTTCTCTCCCGTGCAGAGGGCTCGGAAATTCTCAGCGGTTTTTGGAGTTGTGTCTGCAAATAACTCCATGACAATCCGGCCTGCTTTCACCCTCCCAATCAGAATGTCCAAGAAAACTTTTGGGTTGGTCATTGCTCTCTTCTCTTCTACTGCTCCCAAACTTCAAATTGGTTTCTGTCAAATTACAATCTTCAGCTTTTTCCATCCTTAACAAATCACTCGATAGAAAGTAAAAACAACACGTTTGCTTTTTTTTTCACAATTAGAGATTCTTCAAAAGataattattaaaatataattaGAAAATAGCACGGTTAAATGACAATCCTACTATATACAAACAACTTGAGATAATCATGCTTTTCGAGTAAAACCACACTTGAAAACGGTGGCCATAAGATTAACTTGAAGGAGTGTCTCAAAGATCCAATTTTCAGATTAGAATTTTCAGCCCCGATTAACTTCAAAACCGTCTTCTACACTAAACATCAGTCAATAGAAAGCAAAGCATGCTTATTTTGATAATTAAGGATTATTCAAAAGGCATTCAAATAAATAATACTCGAAATTACTTTACGTTGTGTCTCAAACAAAATTTTCAGCAAATACTTCAGATCTGATTTATTTGAAACACAATCCTTAACACCCCATTACCCAGAAAATAACCCTATTGCTTGTCATTACTTTACAAATGACCTCCATATAGTTTTCGACAGCGTATTTTCTAATACCAAAGATCCGAAATTATAGTATTCATGTCAACAATACAAAACACTTAAAGTAATCTACAGATAAACCAGCATGCAATTCATCACACTCTCAAGAGACTTAAGTAATCTGAATCACATCGACAAGCATAAGCAGTGGGGGAAAAAAGACAGAAAAACTAAAAAGCAGAAACAATTAATAGAAATATCAATACAATTCCAACTCTGGCAAAGAATAAGAAAATAGAAAATCCCCCAATCAAAGAAGGGTGAAAGATGTATCAGAAAATGTTCGTCATCACTCTCAAATCCCGTAGAGGGCGGACACGAAATCGGTCGATAGACTGAAAAGAACGTGCTAAGAGAGCAAAAGACGATGAAATAATATGGCACAAGTATTGAGCTCAGCAGGCATTTATACAATGAACCTGAAAGCCTTCGATATGTGCAATTGCAGAACGAAGAGTTCTCAAATTCGCTTGAGTAGAGAAGAAATCAATGATGAAGAAAGAATCTACCTTTGAGGAAG

Coding sequence (CDS)

ATGCTCTCCTCCACCATCACCAACGCCAACTCTCTCAGTTCTCTCTCCTCCATTGCCCACACCACCTCCATCTTCCTCCATCAACCCAGAGACTCCCCTCTCCGCCTCTTCCTCCGTCGCCGTCTAAACCCCATTTCCGCCATTATTAACCCTTCTTCTTCCTCCTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCCCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATATCCTCTCCAACCGCCTCGGCCTATGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGCTTCAAGAGGGCTTCACTCCTCCTGTTCTAGAAGAAATCACCGGAATTAGCGGTGTTCAGCAGAATAGCTTCATCGTTGGCGCTCAGGTTCGCGAATCCCTACTTCAGTCCAATGACTCCGATCCAGATGTAATCGCCTCCTTCGATACTGGTGGTGCGGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCCCAGGATCTGGCTCGAGCAATGAAGGATTTTCCTCGACGAAGAGGGGACAAAGGTTGGGAGTATTTTGATTACGATTTTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTGAGTAGAGAGTACAATAGTTCAACGGAGAGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAGGGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGCAGTTAAAGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTTGCGGAGGCGACGACAGTGGTGGTGATGCCGGTGTGCAAGGCAGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTACCGGGATGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGTGGACTAGTAGTGGCGTTTGAGGATGCGAGGGTTCTGCCATGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGTAGAAGGGAGGTGGTGGCGGGAGATGGATTTTATCTGATGGGTGGAGGCGATGGAGGTGGGGATTTGAAGGTGGAGAGAGGGAATGCATTGATGGAAATGGGAGTGAAGGAGAGCTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAGGGAGACGGAAGATGATCAATTGAGTGATGAAGATTGGGACTAA

Protein sequence

MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD*

Homology

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BLAST of Cucsa.291680 vs. Swiss-Prot
Match: RAF1_ARATH (Rubisco accumulation factor 1, chloroplastic OS=Arabidopsis thaliana GN=RAF1 PE=2 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 9.9e-130
Identity = 253/452 (55.97%), Postives = 329/452 (72.79%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60
           MLS T T  +S  S+ + + T   F  +P      ++ +      SA+I  S+     KQ
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP------VYRKPFTTITSALIPASNRQAPPKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120
           Q+YQPFRPPPSP+PP++RSLDT GK+ +L++RLGLWFEYAPLISSL  EGFTPP +EE+T
Sbjct: 61  QLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELT 120

Query: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGV+QNS IVGAQVR+SL+QS  + P++IA+FDT GAELLYEIRLL+T +R AAA+YI
Sbjct: 121 GISGVEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240
           V++  D+KGA DLARA+KDFP RRGD G   FDY+  GDCL++M YR SRE+ S +E RT
Sbjct: 181 VDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300
             LE+AL+  VTEKA+  ++ +L G+ + +   EEEI   ++VPVVR++ GEVA A++VV
Sbjct: 241 TLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVA 360
           V+PVCKA EGE+ + EAPME  S GEFGVV AEK WSRWVVLPGW+PV  + K  G+ V+
Sbjct: 301 VLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVS 360

Query: 361 FEDAR-VLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALME 420
           F D R VLPW      K E I+VV DR ++ V A +G+Y +   DGG  +K++RG  L E
Sbjct: 361 FSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG--MKLDRGLVLKE 420

Query: 421 MGVKESLGTVLLVVRPPRETEDD-QLSDEDWD 451
            GV ESLG V+LVVRPPR+ +D+ Q++DEDWD
Sbjct: 421 KGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

[Close]

BLAST of Cucsa.291680 vs. Swiss-Prot
Match: RAF2_ARATH (Rubisco accumulation factor 2, chloroplastic OS=Arabidopsis thaliana GN=RAF2 PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-125
Identity = 244/452 (53.98%), Postives = 317/452 (70.13%), Query Frame = 1


Query: 11  SLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSL-------AAKQQVY 70
           SL S      TT      P   P+    R     ++A + P  SS         A+QQ+Y
Sbjct: 6   SLISSPFTQSTTHGLFTNPITRPVNPLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLY 65

Query: 71  QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGIS 130
           QPFRPP SP+P Q+RSLD+ GK+ IL+ R+ LWFEYAPLISSL  +GFTPP +EE+TGIS
Sbjct: 66  QPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAPLISSLYTDGFTPPTIEELTGIS 125

Query: 131 GVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 190
            ++QN  IVGAQVR+S+LQS   +P++I++FDTGGAELLYEIRLLST +R AAA +I++ 
Sbjct: 126 SIEQNRLIVGAQVRDSILQSIH-EPELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDR 185

Query: 191 RLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAAL 250
            +DSKGAQDLARA+KD+P RRGD GW  FDY+  GDCL+++YYR SRE  + +++RT+ L
Sbjct: 186 NIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSML 245

Query: 251 EEALKVVVTEKARDL----IVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTV 310
            +AL V  +EKA++     + GD E + + +   +EE   A+++PVVR+K GEVAEAT+V
Sbjct: 246 LQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVKAIRIPVVRLKFGEVAEATSV 305

Query: 311 VVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVV 370
           VV+PVCKA EGEK + EAPME+ + G+F VV AEKGW RWVVLP W PVA + KGG  V 
Sbjct: 306 VVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVS 365

Query: 371 AFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALME 430
             +D +VLPW      KEEP+LVVADR R  V A DG+YL+   +G   LK+E+G+ L  
Sbjct: 366 FRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGYYLVVAENG---LKLEKGSDLKA 425

Query: 431 MGVKESLGTVLLVVRPPRETEDD-QLSDEDWD 451
             VKESLG V+LVVRPPRE +DD Q S ++WD
Sbjct: 426 REVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449

[Close]

BLAST of Cucsa.291680 vs. Swiss-Prot
Match: RAF1_ORYSJ (Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=RAF1 PE=2 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.8e-97
Identity = 198/406 (48.77%), Postives = 267/406 (65.76%), Query Frame = 1


Query: 57  AAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVL 116
           A   Q+YQPF PPPSPLP +Y+ LD   +L +L +RLGLW EYAPLIS+L +EGFTP  +
Sbjct: 74  APPDQLYQPFHPPPSPLPDKYKDLDLGQRLAVLRDRLGLWHEYAPLISALSREGFTPSSI 133

Query: 117 EEITGISGVQQNSFIVGAQVRESLLQSNDSDP-DVIASFDT-GGAELLYEIRLLSTEKRA 176
           EE TGISGV+QNS +V  QVR+SL+      P +++  FD+ GG ELLYE+R L+  +RA
Sbjct: 134 EEATGISGVEQNSVVVATQVRDSLVADEGGFPAELLRYFDSYGGPELLYELRFLNARQRA 193

Query: 177 AAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNS 236
            AA++ ++ RL+ +G ++LAR+MKDFP+RRGD GWE F  D  GDCLA+  +R SRE   
Sbjct: 194 DAARHAIDRRLEPRGVRELARSMKDFPQRRGDDGWEAFTRDNPGDCLAFARFRQSRE-AI 253

Query: 237 STERRTAALEEALKVVVTEKARDLIVGDLE--------GKGDGKDGVEEEIGAAVK--VP 296
             E   A LE AL+VV TE AR  +  +L+         + D +DG      AA +  VP
Sbjct: 254 DAEDSVAELERALEVVDTEPARARVEAELDRARRKAAGEEVDDEDGAANAAAAASRPAVP 313

Query: 297 VVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPG 356
           VVR+  GEVAEATTV+++PV + G+G + +  AP   R++ + G+V  +KGW+RW V+PG
Sbjct: 314 VVRLMYGEVAEATTVLLLPVVREGDGGEALAHAPRRTRTDADLGMVEVDKGWTRWAVVPG 373

Query: 357 WEPVAGLVKGGGLVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGD 416
           W PVA  V G  +V+   D R LPWR     + E +LVVA+R RREVV  DG Y++   +
Sbjct: 374 WGPVAE-VAGEAVVIELADGRTLPWRS---AEAERVLVVANRGRREVVE-DGIYVV---E 433

Query: 417 GGGDLKVERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
             G L VE+G  L   GV E+   VL+VVRPPR+ EDD +SD++WD
Sbjct: 434 REGRLVVEKGRKLAAEGVGEAAAEVLVVVRPPRD-EDDMISDDEWD 469

[Close]

BLAST of Cucsa.291680 vs. Swiss-Prot
Match: RAF1_MAIZE (Rubisco accumulation factor 1, chloroplastic OS=Zea mays GN=RAF1 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.8e-92
Identity = 190/408 (46.57%), Postives = 267/408 (65.44%), Query Frame = 1


Query: 56  LAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPV 115
           +A   Q+YQPF PPPSPLPP  R+LD   +L IL +R+GLW EYAPLISSL ++GF P  
Sbjct: 66  MAPPGQLYQPFHPPPSPLPPSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRDGFNPSS 125

Query: 116 LEEITGISGVQQNSFIVGAQVRESLLQSNDS--DPDVIASFDT-GGAELLYEIRLLSTEK 175
           ++E TGISGV+QN  +V +QVR+SLL    +   PD++  FD+ GG E+LYE+R L+  +
Sbjct: 126 IQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELRFLNARQ 185

Query: 176 RAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREY 235
           RA AA++ +  RL+ KG ++LARAMK FPR RG++GWE F  D   DCLA+  +R SRE 
Sbjct: 186 RADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARFRQSRE- 245

Query: 236 NSSTERRTAALEEALKVVVTEKARDLIVGDLE---GKGDGKDGVEEE-----IGAAVK-- 295
               + R A LE AL+VV TE  R  +  +LE    K  G++ V+EE       A+++  
Sbjct: 246 AIDVQDRVAELERALQVVETESGRARVELELERARRKAAGEEEVDEEGEEDDAAASLRPG 305

Query: 296 VPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVL 355
           V VVR++ GEVAEATTV+++PV +  +G   +  AP   +++   GVV  ++ W+RW V+
Sbjct: 306 VTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAWARWAVV 365

Query: 356 PGWEPVAGLVKGGGLVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGG 415
           PGW PVA       +VV   D R LPWR++    EEP+LV+A+RS++EVV  +G Y++  
Sbjct: 366 PGWGPVAE-AADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEVVE-EGVYVL-- 425

Query: 416 GDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
            +  G L VERG  L E G+  +   V++VVRPP++ EDD +SDE+WD
Sbjct: 426 -EREGRLVVERGKKLAEQGIAAAAAEVVIVVRPPKD-EDDMVSDEEWD 463

[Close]

BLAST of Cucsa.291680 vs. TrEMBL
Match: A0A0A0LY43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690280 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 3.6e-256
Identity = 449/450 (99.78%), Postives = 450/450 (100.00%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60
           MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240
           VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGG+VVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEM 420
           FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEM
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEM 420

Query: 421 GVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
           GVKESLGTVLLVVRPPRETEDDQLSDEDWD
Sbjct: 421 GVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

[Close]

BLAST of Cucsa.291680 vs. TrEMBL
Match: M5WAU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005554mg PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.4e-159
Identity = 286/448 (63.84%), Postives = 354/448 (79.02%), Query Frame = 1


Query: 3   SSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQV 62
           SS   N N+ ++ + +  +TS     P   PL       L PISA + PSSSS   +QQV
Sbjct: 13  SSFNPNTNTNTNTNLLLFSTSFL--NPHPPPLLYPKPSSLKPISATLTPSSSS--QQQQV 72

Query: 63  YQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGI 122
           YQPFRPPPSP+P ++RSLD  G+L IL+NRLGLW+E+APLI SLLQEGFTPP +EE+TGI
Sbjct: 73  YQPFRPPPSPVPAKFRSLDANGRLEILANRLGLWYEFAPLIPSLLQEGFTPPTIEEVTGI 132

Query: 123 SGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVE 182
           SGV+QN  +V AQVR+SL+QS  +DP ++A FDTGG+ELLYEIRLLS ++RAAAA+YI+E
Sbjct: 133 SGVEQNRLVVAAQVRDSLVQSK-TDPKILAEFDTGGSELLYEIRLLSVQQRAAAARYIIE 192

Query: 183 NRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAA 242
           N+LD+KG QDLAR+MKDFPRRRGDKGWE FDY   GDCL ++YYR +RE+ + +E RTAA
Sbjct: 193 NKLDAKGTQDLARSMKDFPRRRGDKGWESFDYAHPGDCLGFIYYRQAREHKNPSEPRTAA 252

Query: 243 LEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVM 302
           LE+ALKV  T+KA+ +I+ DLEG+ D K+G E ++   V+VPVVR+K GEVAE++ VV++
Sbjct: 253 LEQALKVAGTDKAKKIILTDLEGETDEKEGREGDVIDVVRVPVVRLKFGEVAESSKVVIL 312

Query: 303 PVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVAFE 362
           PVC+A E +K V EAP E  SEGEFGVVVAEKGW RWVVLPGWEPV GL K GG+VV+F 
Sbjct: 313 PVCRADEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGK-GGVVVSFS 372

Query: 363 DARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEMGV 422
           DARVLPW+VNRWYKEEPIL+VADRS++EV A DGFYL     GG   KV RG+AL E GV
Sbjct: 373 DARVLPWKVNRWYKEEPILLVADRSKKEVTADDGFYLAAVEGGGLGFKVVRGSALKETGV 432

Query: 423 KESLGTVLLVVRPPRETEDDQLSDEDWD 451
           KESLGTV+++VRPPR+  DDQLS+EDW+
Sbjct: 433 KESLGTVVMIVRPPRDETDDQLSEEDWE 454

[Close]

BLAST of Cucsa.291680 vs. TrEMBL
Match: W9RQR4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024527 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 3.1e-154
Identity = 286/451 (63.41%), Postives = 352/451 (78.05%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAII-NPSSSSLAAK 60
           MLS T   +N+L   SS  H + + L +P            L PISA   NP      ++
Sbjct: 1   MLSLT---SNTLKPFSSF-HPSFLLLSKPS-----------LKPISATFSNPFPPP--SQ 60

Query: 61  QQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEI 120
           QQ+YQPFRPPPSPLP Q+RSLD + +L +L++RLGLWFEYAPLI SL+QEGFTPP LEE 
Sbjct: 61  QQLYQPFRPPPSPLPNQFRSLDVKSRLEVLADRLGLWFEYAPLIPSLIQEGFTPPSLEEA 120

Query: 121 TGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKY 180
           TGISG++QN  +V AQVR+SL+QSN +DP V+++FD GGAELLYEIRLL+ ++R+AAA Y
Sbjct: 121 TGISGIEQNHLVVAAQVRDSLIQSN-TDPAVVSAFDLGGAELLYEIRLLNAQQRSAAASY 180

Query: 181 IVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERR 240
           I  N LD++G QDLAR+++DFPRRRGDKGWE FDY   GDCLA+MY+R SRE+   +E+R
Sbjct: 181 IAANGLDARGVQDLARSVRDFPRRRGDKGWESFDYTQPGDCLAFMYFRQSREHKKPSEQR 240

Query: 241 TAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTV 300
           TAALE+AL   VTE+A+  ++ +L  +G+G+   E EIG  V+VPVVR+KIGEVAEA+TV
Sbjct: 241 TAALEQALSAAVTERAKGRVLEELNAEGEGEITGEGEIGEEVRVPVVRLKIGEVAEASTV 300

Query: 301 VVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVV 360
            V+PVCKAGE +KG+ EAP E  +EGEFGVVVAEKGW+RWVVLP WEPVAGL K GG+VV
Sbjct: 301 AVLPVCKAGERDKGLEEAPRECWTEGEFGVVVAEKGWARWVVLPAWEPVAGLGK-GGVVV 360

Query: 361 AFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALME 420
           +F DARVLPWR NRWYKEE ILVVADR R+EV   +GFYL+GG   GGDLKVERG+AL E
Sbjct: 361 SFSDARVLPWRTNRWYKEEAILVVADRDRKEVSVDNGFYLVGG--DGGDLKVERGSALKE 420

Query: 421 MGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
            GV+ESLGTV+LVVRPP++  DDQLSDEDW+
Sbjct: 421 TGVEESLGTVVLVVRPPKDAVDDQLSDEDWE 430

[Close]

BLAST of Cucsa.291680 vs. TrEMBL
Match: A0A067JUQ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23533 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 9.9e-153
Identity = 271/410 (66.10%), Postives = 332/410 (80.98%), Query Frame = 1


Query: 42  LNPISAIINPSSSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAP 101
           L PISA + PSS    A QQ+YQPFRPPP+ LPPQY+SLD  G+L IL+NRLGLW+EYAP
Sbjct: 45  LKPISATLIPSSPPPPASQQLYQPFRPPPNTLPPQYQSLDAAGRLEILANRLGLWYEYAP 104

Query: 102 LISSLLQEGFTPPVLEEITGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAEL 161
           LI+SL++EGF+P  +EE TGISGV+QN  +V AQVRESL+QS  +DP+++A FDTGGAEL
Sbjct: 105 LITSLIREGFSPTSIEESTGISGVEQNRLVVAAQVRESLIQSK-TDPEIVAEFDTGGAEL 164

Query: 162 LYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCL 221
           LYEIRLLS  +RAAAA+++++++LD+KGAQDLARAMKDFPRRRGDK WE FDY   GDCL
Sbjct: 165 LYEIRLLSVSQRAAAARFLIQHKLDAKGAQDLARAMKDFPRRRGDKAWEDFDYTLPGDCL 224

Query: 222 AYMYYRLSREYNSSTERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAV 281
           ++MYYR SRE+   +E+RT ALE AL V  +EKA++ I+ +L+G  + KDG E E+  +V
Sbjct: 225 SFMYYRQSREHKDLSEQRTNALEMALDVAESEKAKNSILKELQGDSEDKDGEEGEMADSV 284

Query: 282 KVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVV 341
           +VPVVR+K+GEVAEA+ VVV+PVC+A + EK + EAP E R+EGEFGVVVAEKGW RWVV
Sbjct: 285 RVPVVRLKLGEVAEASNVVVLPVCRAEQIEKEILEAPWECRTEGEFGVVVAEKGWERWVV 344

Query: 342 LPGWEPVAGLVKGGGLVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMG 401
           LP WEPV GL K GG+VVAF DARVLPW+VNRWYKEE +LVVADR R+EV   DGFYL+ 
Sbjct: 345 LPAWEPVVGLGK-GGVVVAFPDARVLPWKVNRWYKEEAVLVVADRGRKEVTIDDGFYLVA 404

Query: 402 -GGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
             G G G LKVERG+AL   GV+ SLGTV+ VVRPP+E  DDQL DEDW+
Sbjct: 405 VDGSGDGGLKVERGSALKAKGVEVSLGTVVTVVRPPKEETDDQLRDEDWE 452

[Close]

BLAST of Cucsa.291680 vs. TrEMBL
Match: B9S7J3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0608630 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 4.9e-152
Identity = 284/459 (61.87%), Postives = 356/459 (77.56%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFL-----RRRLNPISAIINPSSSS 60
           MLS+T+     +S  +     +S F+     +PL  ++     + +L PISA + PS+  
Sbjct: 1   MLSATVNTHIPISLSNPNKPFSSSFI-----TPLFTYVSPSSQKTQLKPISAALIPSTPP 60

Query: 61  LAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPV 120
             + QQ+YQPFRPPPSP+P Q+ SLDT G+L +L+NRLGLW+EYAPLI SL+QEGF+PP 
Sbjct: 61  -PSNQQLYQPFRPPPSPIPSQFSSLDTAGRLEVLANRLGLWYEYAPLIPSLIQEGFSPPS 120

Query: 121 LEEITGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAA 180
           +EE TGISGV+QN  +V A+VRESL QS  +  ++++ FDTGGAELLYEIRLLS  +RAA
Sbjct: 121 IEESTGISGVEQNRLVVAAKVRESLTQSQTA-AEIVSEFDTGGAELLYEIRLLSAPQRAA 180

Query: 181 AAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSS 240
           AA++IVENRLD+KGA+DLARAMKDFPRRRGDKGWE FDY   GDCL++MYYR SRE+ + 
Sbjct: 181 AARFIVENRLDAKGAEDLARAMKDFPRRRGDKGWESFDYTLPGDCLSFMYYRQSREHKTP 240

Query: 241 TERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAE 300
           +E RT ALE AL V  +EKA++ ++ +LEG  +GK+  E E+G A +VPVVR++IGEVAE
Sbjct: 241 SEPRTNALERALDVAESEKAKNEVLKELEGDSEGKEEKEGEVGDATRVPVVRLRIGEVAE 300

Query: 301 ATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGG 360
           AT+VVV+PVC+A + EK + EAP E +SEGEFGVVVAEKGW RWVVLPGWEPV GL K G
Sbjct: 301 ATSVVVLPVCRALQKEKEIWEAPWECKSEGEFGVVVAEKGWERWVVLPGWEPVVGLEK-G 360

Query: 361 GLVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLM---GGGDG-GGDLKV 420
           G+VVAF DAR LPW+VNRWYKEE ILVVADR  +EV A DGFYL+   G GDG  G L+V
Sbjct: 361 GVVVAFPDARALPWKVNRWYKEEAILVVADRGSKEVNANDGFYLVAVDGSGDGRSGGLEV 420

Query: 421 ERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
           ERG+ L E GV+ESLGTV+LVVRPP+E + DQLSDE+W+
Sbjct: 421 ERGSILKERGVEESLGTVVLVVRPPKE-QTDQLSDENWE 450

[Close]

BLAST of Cucsa.291680 vs. TAIR10
Match: AT5G28500.1 (AT5G28500.1 unknown protein)

HSP 1 Score: 464.9 bits (1195), Expect = 5.6e-131
Identity = 253/452 (55.97%), Postives = 329/452 (72.79%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60
           MLS T T  +S  S+ + + T   F  +P      ++ +      SA+I  S+     KQ
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP------VYRKPFTTITSALIPASNRQAPPKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120
           Q+YQPFRPPPSP+PP++RSLDT GK+ +L++RLGLWFEYAPLISSL  EGFTPP +EE+T
Sbjct: 61  QLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELT 120

Query: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGV+QNS IVGAQVR+SL+QS  + P++IA+FDT GAELLYEIRLL+T +R AAA+YI
Sbjct: 121 GISGVEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240
           V++  D+KGA DLARA+KDFP RRGD G   FDY+  GDCL++M YR SRE+ S +E RT
Sbjct: 181 VDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300
             LE+AL+  VTEKA+  ++ +L G+ + +   EEEI   ++VPVVR++ GEVA A++VV
Sbjct: 241 TLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVA 360
           V+PVCKA EGE+ + EAPME  S GEFGVV AEK WSRWVVLPGW+PV  + K  G+ V+
Sbjct: 301 VLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVS 360

Query: 361 FEDAR-VLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALME 420
           F D R VLPW      K E I+VV DR ++ V A +G+Y +   DGG  +K++RG  L E
Sbjct: 361 FSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG--MKLDRGLVLKE 420

Query: 421 MGVKESLGTVLLVVRPPRETEDD-QLSDEDWD 451
            GV ESLG V+LVVRPPR+ +D+ Q++DEDWD
Sbjct: 421 KGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

[Close]

BLAST of Cucsa.291680 vs. TAIR10
Match: AT3G04550.1 (AT3G04550.1 unknown protein)

HSP 1 Score: 451.4 bits (1160), Expect = 6.4e-127
Identity = 244/452 (53.98%), Postives = 317/452 (70.13%), Query Frame = 1


Query: 11  SLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSL-------AAKQQVY 70
           SL S      TT      P   P+    R     ++A + P  SS         A+QQ+Y
Sbjct: 6   SLISSPFTQSTTHGLFTNPITRPVNPLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLY 65

Query: 71  QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGIS 130
           QPFRPP SP+P Q+RSLD+ GK+ IL+ R+ LWFEYAPLISSL  +GFTPP +EE+TGIS
Sbjct: 66  QPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAPLISSLYTDGFTPPTIEELTGIS 125

Query: 131 GVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 190
            ++QN  IVGAQVR+S+LQS   +P++I++FDTGGAELLYEIRLLST +R AAA +I++ 
Sbjct: 126 SIEQNRLIVGAQVRDSILQSIH-EPELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDR 185

Query: 191 RLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAAL 250
            +DSKGAQDLARA+KD+P RRGD GW  FDY+  GDCL+++YYR SRE  + +++RT+ L
Sbjct: 186 NIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSML 245

Query: 251 EEALKVVVTEKARDL----IVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTV 310
            +AL V  +EKA++     + GD E + + +   +EE   A+++PVVR+K GEVAEAT+V
Sbjct: 246 LQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVKAIRIPVVRLKFGEVAEATSV 305

Query: 311 VVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVV 370
           VV+PVCKA EGEK + EAPME+ + G+F VV AEKGW RWVVLP W PVA + KGG  V 
Sbjct: 306 VVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVS 365

Query: 371 AFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALME 430
             +D +VLPW      KEEP+LVVADR R  V A DG+YL+   +G   LK+E+G+ L  
Sbjct: 366 FRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGYYLVVAENG---LKLEKGSDLKA 425

Query: 431 MGVKESLGTVLLVVRPPRETEDD-QLSDEDWD 451
             VKESLG V+LVVRPPRE +DD Q S ++WD
Sbjct: 426 REVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449

[Close]

BLAST of Cucsa.291680 vs. NCBI nr
Match: gi|449449643|ref|XP_004142574.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 891.7 bits (2303), Expect = 5.2e-256
Identity = 449/450 (99.78%), Postives = 450/450 (100.00%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60
           MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240
           VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGG+VVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEM 420
           FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEM
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEM 420

Query: 421 GVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
           GVKESLGTVLLVVRPPRETEDDQLSDEDWD
Sbjct: 421 GVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

[Close]

BLAST of Cucsa.291680 vs. NCBI nr
Match: gi|659125493|ref|XP_008462710.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo])

HSP 1 Score: 826.2 bits (2133), Expect = 2.7e-236
Identity = 413/454 (90.97%), Postives = 435/454 (95.81%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60
           MLSSTITNANSL+SLSSIAHTT+IFLHQP DSPLRLFLRRR NPISAIINPS S LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWF+YAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN+F+VGAQVRESL+QSNDSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240
           VENRLDSKGAQDLARA+KDFPRR+GD+GWE FDYD AGDCLAYMYYRLSREYN+S+ERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLE KGDGKDGVEEE GA V+VPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGG+VVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLM----GGGDGGGDLKVERGNA 420
           F+DARVLPWRVNRWYKEEPILVVADRSR+EVVAGDGFYLM    GGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
           L EMGVKESLGTV+LVVRPP+E EDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

[Close]

BLAST of Cucsa.291680 vs. NCBI nr
Match: gi|595824052|ref|XP_007205174.1| (hypothetical protein PRUPE_ppa005554mg [Prunus persica])

HSP 1 Score: 570.1 bits (1468), Expect = 3.5e-159
Identity = 286/448 (63.84%), Postives = 354/448 (79.02%), Query Frame = 1


Query: 3   SSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQV 62
           SS   N N+ ++ + +  +TS     P   PL       L PISA + PSSSS   +QQV
Sbjct: 13  SSFNPNTNTNTNTNLLLFSTSFL--NPHPPPLLYPKPSSLKPISATLTPSSSS--QQQQV 72

Query: 63  YQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGI 122
           YQPFRPPPSP+P ++RSLD  G+L IL+NRLGLW+E+APLI SLLQEGFTPP +EE+TGI
Sbjct: 73  YQPFRPPPSPVPAKFRSLDANGRLEILANRLGLWYEFAPLIPSLLQEGFTPPTIEEVTGI 132

Query: 123 SGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVE 182
           SGV+QN  +V AQVR+SL+QS  +DP ++A FDTGG+ELLYEIRLLS ++RAAAA+YI+E
Sbjct: 133 SGVEQNRLVVAAQVRDSLVQSK-TDPKILAEFDTGGSELLYEIRLLSVQQRAAAARYIIE 192

Query: 183 NRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAA 242
           N+LD+KG QDLAR+MKDFPRRRGDKGWE FDY   GDCL ++YYR +RE+ + +E RTAA
Sbjct: 193 NKLDAKGTQDLARSMKDFPRRRGDKGWESFDYAHPGDCLGFIYYRQAREHKNPSEPRTAA 252

Query: 243 LEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVM 302
           LE+ALKV  T+KA+ +I+ DLEG+ D K+G E ++   V+VPVVR+K GEVAE++ VV++
Sbjct: 253 LEQALKVAGTDKAKKIILTDLEGETDEKEGREGDVIDVVRVPVVRLKFGEVAESSKVVIL 312

Query: 303 PVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGLVVAFE 362
           PVC+A E +K V EAP E  SEGEFGVVVAEKGW RWVVLPGWEPV GL K GG+VV+F 
Sbjct: 313 PVCRADEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGK-GGVVVSFS 372

Query: 363 DARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNALMEMGV 422
           DARVLPW+VNRWYKEEPIL+VADRS++EV A DGFYL     GG   KV RG+AL E GV
Sbjct: 373 DARVLPWKVNRWYKEEPILLVADRSKKEVTADDGFYLAAVEGGGLGFKVVRGSALKETGV 432

Query: 423 KESLGTVLLVVRPPRETEDDQLSDEDWD 451
           KESLGTV+++VRPPR+  DDQLS+EDW+
Sbjct: 433 KESLGTVVMIVRPPRDETDDQLSEEDWE 454

[Close]

BLAST of Cucsa.291680 vs. NCBI nr
Match: gi|645222762|ref|XP_008218310.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic [Prunus mume])

HSP 1 Score: 565.5 bits (1456), Expect = 8.6e-158
Identity = 286/454 (63.00%), Postives = 350/454 (77.09%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTSIFLH----QPRDSPLRLFLRRRLNPISAIINPSSSSL 60
           MLS T       SS +   +T  +        PR  PL       L PISA + PSSS  
Sbjct: 1   MLSVTANTLKPFSSFNPNTNTNLLLFSTSFLNPRPPPLLYPKPSSLKPISATLTPSSSF- 60

Query: 61  AAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVL 120
             +QQVYQPFRPPPSP+P ++RSLD  G++ ILSNRLGLW+E+APLI SLLQEGFTPP +
Sbjct: 61  -QQQQVYQPFRPPPSPVPAKFRSLDANGRIEILSNRLGLWYEFAPLIPSLLQEGFTPPTI 120

Query: 121 EEITGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAA 180
           EE TGISGV+QN  +V AQVR+SL+QS  +DP ++A FDTGG+ELLYEIRLLS ++RAAA
Sbjct: 121 EEATGISGVEQNRLVVAAQVRDSLVQSK-TDPQILAEFDTGGSELLYEIRLLSVQQRAAA 180

Query: 181 AKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSST 240
           A+YI+EN+LD+KG QDLAR+MKDFPRRRG+KGWE FDY   GDCL +MYYR +RE+ + +
Sbjct: 181 ARYIIENKLDAKGTQDLARSMKDFPRRRGEKGWESFDYAHPGDCLGFMYYRQAREHKNPS 240

Query: 241 ERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEA 300
           E RTAALE+ALKV  T+KA+ +I+ D EG+ D K+G E ++  AV+VPVVR+K GEVAE+
Sbjct: 241 EPRTAALEQALKVAGTDKAKKIILTDFEGETDEKEGREWDVIDAVRVPVVRLKFGEVAES 300

Query: 301 TTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGG 360
           + VV++PVC+A E +K V EAP E  SEGEFGVVVAEKGW RWVVLPGWEPV GL K G 
Sbjct: 301 SKVVILPVCRAEEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGK-GA 360

Query: 361 LVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGGDLKVERGNA 420
           +VV+F DARVLPW+VN+WYKEEPILVVADRS++EV A DGFYL     GG   KV RG+A
Sbjct: 361 VVVSFSDARVLPWKVNKWYKEEPILVVADRSKKEVAADDGFYLAAVEGGGLGFKVVRGSA 420

Query: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
           L E GVKESLGTV+++VRPPR+  DDQLS+EDW+
Sbjct: 421 LKETGVKESLGTVVMIVRPPRDDTDDQLSEEDWE 450

[Close]

BLAST of Cucsa.291680 vs. NCBI nr
Match: gi|657958419|ref|XP_008370732.1| (PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus domestica])

HSP 1 Score: 560.8 bits (1444), Expect = 2.1e-156
Identity = 285/463 (61.56%), Postives = 351/463 (75.81%), Query Frame = 1


Query: 1   MLSSTITNANSLSSLSSIAHTTS-------------IFLHQPRDSPLRLFLRRRLNPISA 60
           MLS T+   NSL   SS   TT+             + LH    SP          PISA
Sbjct: 1   MLSLTV---NSLKPFSSFNPTTTFLSSTSFLNPHPPLLLHHKPSSP---------KPISA 60

Query: 61  IINPSSSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLL 120
            + PSSS+   ++QVYQPFRPPPSP+P ++RSLD  G+L IL+NRLGLWFEYAPLI SL 
Sbjct: 61  TLTPSSSTQQQQKQVYQPFRPPPSPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLT 120

Query: 121 QEGFTPPVLEEITGISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRL 180
           QEGFTPP +EEITGISGV+QN  +V AQVR+SL+QSN +DP++++ FD GG+ELLYEIRL
Sbjct: 121 QEGFTPPTIEEITGISGVEQNRLVVAAQVRDSLVQSN-TDPEIVSEFDLGGSELLYEIRL 180

Query: 181 LSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYR 240
           LS ++RAAA+++I+EN+LD KGAQDLAR+MKDFPRRR +KGWE FDY   GDCL +MY+R
Sbjct: 181 LSVQQRAAASRFIIENKLDGKGAQDLARSMKDFPRRRTEKGWESFDYASPGDCLGFMYFR 240

Query: 241 LSREYNSSTERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVR 300
             RE+ + +E RTAALE+ALKV  T+KA+ +I+ +LEG+ + K+  EE++ A V+VPVVR
Sbjct: 241 QGREHKNPSEPRTAALEQALKVAQTDKAKKVILKELEGESEDKEEEEEDVAAGVRVPVVR 300

Query: 301 MKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEP 360
           +K GEVAE+T VV++PVC+A E +K V EAP E  SEGE GV+VAEKGW RWVVLPGWEP
Sbjct: 301 LKFGEVAESTKVVILPVCRAEEKDKEVMEAPWECTSEGELGVMVAEKGWKRWVVLPGWEP 360

Query: 361 VAGLVKGGGLVVAFEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGGDGGG 420
           V  L K GG+VV+F DARVLPW+ NRWYKEEPILVVADRS+REV A DGFYL      G 
Sbjct: 361 VVSLGK-GGVVVSFSDARVLPWKANRWYKEEPILVVADRSKREVEADDGFYLAAXDGEGL 420

Query: 421 DLKVERGNALMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 451
             KV RG+AL E GV+ESLGTV+L+VRPPR+  DDQLSDEDW+
Sbjct: 421 GFKVVRGSALKEAGVEESLGTVVLIVRPPRDETDDQLSDEDWE 449

The following BLAST results are available for this feature:

BLAST of Cucsa.291680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAF1_ARATH	9.9e-130	55.97	Rubisco accumulation factor 1, chloroplastic OS=Arabidopsis thaliana GN=RAF1 PE=...	[more]
RAF2_ARATH	1.1e-125	53.98	Rubisco accumulation factor 2, chloroplastic OS=Arabidopsis thaliana GN=RAF2 PE=...	[more]
RAF1_ORYSJ	3.8e-97	48.77	Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=...	[more]
RAF1_MAIZE	4.8e-92	46.57	Rubisco accumulation factor 1, chloroplastic OS=Zea mays GN=RAF1 PE=1 SV=1	[more]

BLAST of Cucsa.291680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY43_CUCSA	3.6e-256	99.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690280 PE=4 SV=1	[more]
M5WAU1_PRUPE	2.4e-159	63.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005554mg PE=4 SV=1	[more]
W9RQR4_9ROSA	3.1e-154	63.41	Uncharacterized protein OS=Morus notabilis GN=L484_024527 PE=4 SV=1	[more]
A0A067JUQ5_JATCU	9.9e-153	66.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23533 PE=4 SV=1	[more]
B9S7J3_RICCO	4.9e-152	61.87	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0608630 PE=4 SV=1	[more]

BLAST of Cucsa.291680 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28500.1	5.6e-131	55.97	unknown protein	[more]
AT3G04550.1	6.4e-127	53.98	unknown protein	[more]

BLAST of Cucsa.291680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449643\|ref\|XP_004142574.1\|	5.2e-256	99.78	PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis sativus]	[more]
gi\|659125493\|ref\|XP_008462710.1\|	2.7e-236	90.97	PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo]	[more]
gi\|595824052\|ref\|XP_007205174.1\|	3.5e-159	63.84	hypothetical protein PRUPE_ppa005554mg [Prunus persica]	[more]
gi\|645222762\|ref\|XP_008218310.1\|	8.6e-158	63.00	PREDICTED: rubisco accumulation factor 1, chloroplastic [Prunus mume]	[more]
gi\|657958419\|ref\|XP_008370732.1\|	2.1e-156	61.56	PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.291680.1	Cucsa.291680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35299	FAMILY NOT NAMED	coord: 2..450 score: 1.6E
None	No IPR available	PANTHER	PTHR35299:SF2	RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED	coord: 2..450 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.291680	Cla002983	Watermelon (97103) v1	cgywmB535
Cucsa.291680	Csa1G690280	Cucumber (Chinese Long) v2	cgycuB417
Cucsa.291680	MELO3C024664	Melon (DHL92) v3.5.1	cgymeB484
Cucsa.291680	ClCG06G009410	Watermelon (Charleston Gray)	cgywcgB507
Cucsa.291680	CSPI01G33590	Wild cucumber (PI 183967)	cgycpiB440
Cucsa.291680	CmaCh11G009810	Cucurbita maxima (Rimu)	cgycmaB0816
Cucsa.291680	CmoCh11G010010	Cucurbita moschata (Rifu)	cgycmoB0810
Cucsa.291680	Lsi06G007970	Bottle gourd (USVL1VR-Ls)	cgylsiB473
Cucsa.291680	Cp4.1LG04g01890	Cucurbita pepo (Zucchini)	cgycpeB0771
Cucsa.291680	MELO3C024664.2	Melon (DHL92) v3.6.1	cgymedB483
Cucsa.291680	CsaV3_1G045560	Cucumber (Chinese Long) v3	cgycucB450
Cucsa.291680	Cla97C06G119120	Watermelon (97103) v2	cgywmbB508
Cucsa.291680	Bhi02G001029	Wax gourd	cgywgoB591
Cucsa.291680	Carg16480	Silver-seed gourd	carcgyB1031

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.291680	Cucurbita pepo (Zucchini)	cgycpeB0772
Cucsa.291680	Bottle gourd (USVL1VR-Ls)	cgylsiB474
Cucsa.291680	Silver-seed gourd	carcgyB0025
Cucsa.291680	Cucumber (Chinese Long) v3	cgycucB451
Cucsa.291680	Cucurbita maxima (Rimu)	cgycmaB0815
Cucsa.291680	Cucurbita moschata (Rifu)	cgycmoB0809
Cucsa.291680	Wild cucumber (PI 183967)	cgycpiB441
Cucsa.291680	Cucumber (Chinese Long) v2	cgycuB418