Cla97C06G119120 (gene) Watermelon (97103) v2

NameCla97C06G119120
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionrubisco accumulation factor 1, chloroplastic
LocationCla97Chr06 : 15108858 .. 15110222 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCCTCCACCACCACCACCGCCAATTCTCTCACTTCTCTCTCAGCCGCCGCCCACACCACCGCCATTTTCCTTCATCCTCCTCTAGACTCCTCTCTCCGCCTCTTCCTCCGCCGCCGTCCAAACCCCATTTCCGCCATTATAAACCCTTCCCCTTCCCCTTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTCCCCTCTCAATACCGGTCCCTTGACGCCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTTGGACTCTGGTTCGAATACGCCCCCCTCATTTCCTCCTTGATTCAAGAAGGCTTCACACCTTCCACTCTAGAGGAAATCACCGGAATCAGCGGTGTCCAACAGAACATCTTCGTCGTTGGCGCTCAGGTTCGCGATTCCCTAGTCCAGTCCAATAACTCCGATCCAGATGTAATCGCCGCCTTCGATACCAGCGGCGCCGAGTTGCTCTATGAAATTCGCCTCCTAAGTACCGAGAAACGTGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCGCAGGATCTGGCTCGAGCGATGAAAGATTTTCCTCGAAGAAGAGGGGAAAAAGGTTGGGAGTCTTTTGATTACGATTCTCCTGGTGATTGTTTGGCGTTTATGTATTACAGGTTGAGTAGAGAGTACAATAATCAATCGGAGCGGAGAACGGCGGCGTTGGAGGAGGCTTTGAAGGTGGTAGTGACGGATAAGGCAAGGGACCTGATTGTTGGGGATTTGGAGGGAAAAGGAGACGGGAAGGAAGGGGATGAAGAGGAAATCGGAGCGGCAGTTAGGGTTCCGGTGGTGCGGTTGAAGATCGGAGAAGTTGCGGAGGCGACAACGGTAGTGGTGATGCCGGTGTGCAAGGCAGGGAAGGGGGAAATAGGAGTTGGAGAAGCGCCAATGGAGGTAAGAAGCGAGGGAGAATTCGGAGTTGTGGTGGCGGAAAAGGAGTGGAGCAGGTGGGTGGTGCTGCCGGCGTGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGCGGCGTAGTGGTGGCGTTTGAGGATGCGAGAGCTCTACCATGGCGGGTGAACAGGTGGTACAAGGAGGAGCCAATTCTAGTAGTGGTTGATCGGAGTAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTACCTGACAGAAGCCACCGTGGGCGGCGGCGATGGAGGTGGTGAGTTGAAGGTGGAGAGAGGAAATGCATTAATGGAAATGGAAGTGAAGGAGAGTTTGGGAACTGTATTGTTGGTGGTTAGGCCACCAAAGGAAATGGAAGATGATCAGTTGAGTGATGAAGATTGGGATTGA

mRNA sequence

ATGCTTTCCTCCACCACCACCACCGCCAATTCTCTCACTTCTCTCTCAGCCGCCGCCCACACCACCGCCATTTTCCTTCATCCTCCTCTAGACTCCTCTCTCCGCCTCTTCCTCCGCCGCCGTCCAAACCCCATTTCCGCCATTATAAACCCTTCCCCTTCCCCTTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTCCCCTCTCAATACCGGTCCCTTGACGCCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTTGGACTCTGGTTCGAATACGCCCCCCTCATTTCCTCCTTGATTCAAGAAGGCTTCACACCTTCCACTCTAGAGGAAATCACCGGAATCAGCGGTGTCCAACAGAACATCTTCGTCGTTGGCGCTCAGGTTCGCGATTCCCTAGTCCAGTCCAATAACTCCGATCCAGATGTAATCGCCGCCTTCGATACCAGCGGCGCCGAGTTGCTCTATGAAATTCGCCTCCTAAGTACCGAGAAACGTGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCGCAGGATCTGGCTCGAGCGATGAAAGATTTTCCTCGAAGAAGAGGGGAAAAAGGTTGGGAGTCTTTTGATTACGATTCTCCTGGTGATTGTTTGGCGTTTATGTATTACAGGTTGAGTAGAGAGTACAATAATCAATCGGAGCGGAGAACGGCGGCGTTGGAGGAGGCTTTGAAGGTGGTAGTGACGGATAAGGCAAGGGACCTGATTGTTGGGGATTTGGAGGGAAAAGGAGACGGGAAGGAAGGGGATGAAGAGGAAATCGGAGCGGCAGTTAGGGTTCCGGTGGTGCGGTTGAAGATCGGAGAAGTTGCGGAGGCGACAACGGTAGTGGTGATGCCGGTGTGCAAGGCAGGGAAGGGGGAAATAGGAGTTGGAGAAGCGCCAATGGAGGTAAGAAGCGAGGGAGAATTCGGAGTTGTGGTGGCGGAAAAGGAGTGGAGCAGGTGGGTGGTGCTGCCGGCGTGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGCGGCGTAGTGGTGGCGTTTGAGGATGCGAGAGCTCTACCATGGCGGGTGAACAGGTGGTACAAGGAGGAGCCAATTCTAGTAGTGGTTGATCGGAGTAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTACCTGACAGAAGCCACCGTGGGCGGCGGCGATGGAGGTGGTGAGTTGAAGGTGGAGAGAGGAAATGCATTAATGGAAATGGAAGTGAAGGAGAGTTTGGGAACTGTATTGTTGGTGGTTAGGCCACCAAAGGAAATGGAAGATGATCAGTTGAGTGATGAAGATTGGGATTGA

Coding sequence (CDS)

ATGCTTTCCTCCACCACCACCACCGCCAATTCTCTCACTTCTCTCTCAGCCGCCGCCCACACCACCGCCATTTTCCTTCATCCTCCTCTAGACTCCTCTCTCCGCCTCTTCCTCCGCCGCCGTCCAAACCCCATTTCCGCCATTATAAACCCTTCCCCTTCCCCTTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTCCCCTCTCAATACCGGTCCCTTGACGCCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTTGGACTCTGGTTCGAATACGCCCCCCTCATTTCCTCCTTGATTCAAGAAGGCTTCACACCTTCCACTCTAGAGGAAATCACCGGAATCAGCGGTGTCCAACAGAACATCTTCGTCGTTGGCGCTCAGGTTCGCGATTCCCTAGTCCAGTCCAATAACTCCGATCCAGATGTAATCGCCGCCTTCGATACCAGCGGCGCCGAGTTGCTCTATGAAATTCGCCTCCTAAGTACCGAGAAACGTGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCGCAGGATCTGGCTCGAGCGATGAAAGATTTTCCTCGAAGAAGAGGGGAAAAAGGTTGGGAGTCTTTTGATTACGATTCTCCTGGTGATTGTTTGGCGTTTATGTATTACAGGTTGAGTAGAGAGTACAATAATCAATCGGAGCGGAGAACGGCGGCGTTGGAGGAGGCTTTGAAGGTGGTAGTGACGGATAAGGCAAGGGACCTGATTGTTGGGGATTTGGAGGGAAAAGGAGACGGGAAGGAAGGGGATGAAGAGGAAATCGGAGCGGCAGTTAGGGTTCCGGTGGTGCGGTTGAAGATCGGAGAAGTTGCGGAGGCGACAACGGTAGTGGTGATGCCGGTGTGCAAGGCAGGGAAGGGGGAAATAGGAGTTGGAGAAGCGCCAATGGAGGTAAGAAGCGAGGGAGAATTCGGAGTTGTGGTGGCGGAAAAGGAGTGGAGCAGGTGGGTGGTGCTGCCGGCGTGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGCGGCGTAGTGGTGGCGTTTGAGGATGCGAGAGCTCTACCATGGCGGGTGAACAGGTGGTACAAGGAGGAGCCAATTCTAGTAGTGGTTGATCGGAGTAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTACCTGACAGAAGCCACCGTGGGCGGCGGCGATGGAGGTGGTGAGTTGAAGGTGGAGAGAGGAAATGCATTAATGGAAATGGAAGTGAAGGAGAGTTTGGGAACTGTATTGTTGGTGGTTAGGCCACCAAAGGAAATGGAAGATGATCAGTTGAGTGATGAAGATTGGGATTGA

Protein sequence

MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEITGISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRTAALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVVVMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVAFEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNALMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD
BLAST of Cla97C06G119120 vs. NCBI nr
Match: XP_008462710.1 (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo])

HSP 1 Score: 790.8 bits (2041), Expect = 2.5e-225
Identity = 406/454 (89.43%), Postives = 425/454 (93.61%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQ 60
           MLSST T ANSLTSLS+ AHTTAIFLH P+DS LRLFLRRR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEIT 120
           QVYQPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWF+YAPLISSL+QEGFTP TLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQSN+SDPDVIA+FDTSGAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRT 240
           VENRLDSKGAQDLARA+KDFPRR+G++GWE FDYDS GDCLA+MYYRLSREYNN SERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVV 300
           AALEEALKVVVT+KAR+LIVGDLE KGDGK+G EEE GA VRVPVVRLKIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVA 360
           VMPVCKAG+GE GVGEAPMEVRSEG+FGVVVAEK WSRWVVLP WEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNA 420
           F+DAR LPWRVNRWYKEEPILVV DRSRKEVVAGDGFYL   TVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L EM VKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Cla97C06G119120 vs. NCBI nr
Match: XP_004142574.1 (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis sativus] >KGN66790.1 hypothetical protein Csa_1G690280 [Cucumis sativus])

HSP 1 Score: 776.2 bits (2003), Expect = 6.2e-221
Identity = 400/454 (88.11%), Postives = 423/454 (93.17%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQ 60
           MLSST T ANSL+SLS+ AHTT+IFLH P DS LRLFLRRR NPISAIINPS S LAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEIT 120
           QVYQPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTP  LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVR+SL+QSN+SDPDVIA+FDT GAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRT 240
           VENRLDSKGAQDLARAMKDFPRRRG+KGWE FDYD  GDCLA+MYYRLSREYN+ +ERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVV 300
           AALEEALKVVVT+KARDLIVGDLEGKGDGK+G EEEIGAAV+VPVVR+KIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVA 360
           VMPVCKAG+GE GVGEAPMEVRSEGEFGVVVAEK WSRWVVLP WEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNA 420
           FEDAR LPWRVNRWYKEEPILVV DRSR+EVVAGDGFYL    +GGGDGGG+LKVERGNA
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYL----MGGGDGGGDLKVERGNA 420

Query: 421 LMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           LMEM VKESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

BLAST of Cla97C06G119120 vs. NCBI nr
Match: XP_023531170.1 (rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 650.6 bits (1677), Expect = 4.0e-183
Identity = 341/424 (80.42%), Postives = 375/424 (88.44%), Query Frame = 0

Query: 34  LRLFLRRRPNPISAIIN--PSPSPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSN 93
           LRLFLRR PN ISA +N  PSPSPL AK QVYQPFRPPPSPLPSQYRSLDA GKL+VL+N
Sbjct: 32  LRLFLRRPPNLISASLNPYPSPSPLVAKPQVYQPFRPPPSPLPSQYRSLDAAGKLDVLAN 91

Query: 94  RLGLWFEYAPLISSLIQEGFTPSTLEEITGISGVQQNIFVVGAQVRDSLVQS-NNSDPDV 153
           RLGLWFEYAPLISSLIQEGFTP T+EEITGI GVQQN  VVGAQVR+SLVQ+ N++DPD+
Sbjct: 92  RLGLWFEYAPLISSLIQEGFTPPTIEEITGIGGVQQNTLVVGAQVRESLVQTINDADPDL 151

Query: 154 IAAFDTSGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGEKGWE 213
           IAAFDT GAELLYEIRLL+ EKRAAAA+YIV+NRLD KGAQDLARAMKDFPRRRG+KGWE
Sbjct: 152 IAAFDTGGAELLYEIRLLNAEKRAAAARYIVDNRLDGKGAQDLARAMKDFPRRRGDKGWE 211

Query: 214 SFDYDSPGDCLAFMYYRLSREYNNQSERRTAALEEALKVVVTDKARDLIVGDLEGKGDGK 273
           SF+YD PGDCLAFM+YRLSREY+N SE RT+ALE+ALKV VT++AR LIV DLE +G+GK
Sbjct: 212 SFNYDYPGDCLAFMHYRLSREYSNMSEARTSALEDALKVAVTEEARSLIVRDLEREGEGK 271

Query: 274 EGDEEEIGAAVRVPVVRLKIGEVAEATTVVVMPVCKAGKGEIGVGEAPMEVRSEGEFGVV 333
           +  EEEI A V+VPVVRLKIGEVAEATTVVV+PVC   +G  GVGEAPMEVRSEGEFGVV
Sbjct: 272 DEAEEEIEAGVKVPVVRLKIGEVAEATTVVVLPVCNGEEGGKGVGEAPMEVRSEGEFGVV 331

Query: 334 VAEKEWSRWVVLPAWEPVAGLVKGGGVVVAFEDARALPWRVNRWYKEEPILVVVDRSRKE 393
           V E+ W RWVVLP WEP+AGL K GGVVVAF+DARALPWRVNRWYKEE ILVV DRSRKE
Sbjct: 332 VVEEGWRRWVVLPGWEPIAGLGK-GGVVVAFKDARALPWRVNRWYKEEAILVVADRSRKE 391

Query: 394 VVAGDGFYLTEATVGGGDGGGELKVERGNALMEMEVKESLGTVLLVVRPPKEMEDDQLSD 453
           V AGDGFYLT AT  G D  GELKV+RG+ LMEM +KESLGTVLLVVRPPK+M+DDQLSD
Sbjct: 392 VEAGDGFYLTGAT--GND--GELKVQRGSELMEMGLKESLGTVLLVVRPPKDMDDDQLSD 450

Query: 454 EDWD 455
           EDWD
Sbjct: 452 EDWD 450

BLAST of Cla97C06G119120 vs. NCBI nr
Match: XP_022965491.1 (rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 646.7 bits (1667), Expect = 5.7e-182
Identity = 339/424 (79.95%), Postives = 373/424 (87.97%), Query Frame = 0

Query: 34  LRLFLRRRPNPISAIIN--PSPSPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSN 93
           LRLFLR  PN ISA +N  PSPSPL AK QVYQPFRPPPSPLPSQYRSLDA GKL+VL+N
Sbjct: 62  LRLFLRHPPNLISASLNPFPSPSPLVAKPQVYQPFRPPPSPLPSQYRSLDAAGKLDVLAN 121

Query: 94  RLGLWFEYAPLISSLIQEGFTPSTLEEITGISGVQQNIFVVGAQVRDSLVQS-NNSDPDV 153
           RLGLWFEYAPLISSLIQEGFTP T+EEITGI GVQQN  VVGAQVR+SLVQ+ N++DPD+
Sbjct: 122 RLGLWFEYAPLISSLIQEGFTPPTIEEITGIGGVQQNTLVVGAQVRESLVQTINDTDPDL 181

Query: 154 IAAFDTSGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGEKGWE 213
           IAAFDT GAELLYEIRLL+ EKRAAAA+YI+ENRLD KGAQDLARAMKDFPRRRG+KGWE
Sbjct: 182 IAAFDTGGAELLYEIRLLNAEKRAAAARYIMENRLDGKGAQDLARAMKDFPRRRGDKGWE 241

Query: 214 SFDYDSPGDCLAFMYYRLSREYNNQSERRTAALEEALKVVVTDKARDLIVGDLEGKGDGK 273
           SF+YD PGDCLAFM+YRLSREY+N SE RTAAL +ALKV VT++AR LIV DLE +G+GK
Sbjct: 242 SFNYDYPGDCLAFMHYRLSREYSNMSEARTAALADALKVAVTEEARSLIVRDLEREGEGK 301

Query: 274 EGDEEEIGAAVRVPVVRLKIGEVAEATTVVVMPVCKAGKGEIGVGEAPMEVRSEGEFGVV 333
           +G EEEI A VRVPVVRLKIGEVAEATTVVV+PVC   +G  GV EAPMEVRSEGEFGVV
Sbjct: 302 DGAEEEIEAGVRVPVVRLKIGEVAEATTVVVLPVCNGEEGGKGVREAPMEVRSEGEFGVV 361

Query: 334 VAEKEWSRWVVLPAWEPVAGLVKGGGVVVAFEDARALPWRVNRWYKEEPILVVVDRSRKE 393
           VAE+ W RWVVLP WEP+AGL K GGVVV F+DAR+LPWRVNRWYKEE ILVV DRSRKE
Sbjct: 362 VAEEGWRRWVVLPGWEPIAGLGK-GGVVVVFKDARSLPWRVNRWYKEEAILVVADRSRKE 421

Query: 394 VVAGDGFYLTEATVGGGDGGGELKVERGNALMEMEVKESLGTVLLVVRPPKEMEDDQLSD 453
           V AGDGFY+T AT  G D  GELKV+RG+ LMEM +KESLGTVLLVVRPPK+M+DDQLSD
Sbjct: 422 VEAGDGFYMTGAT--GND--GELKVQRGSELMEMGLKESLGTVLLVVRPPKDMDDDQLSD 480

Query: 454 EDWD 455
           EDWD
Sbjct: 482 EDWD 480

BLAST of Cla97C06G119120 vs. NCBI nr
Match: XP_022933155.1 (rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 353/459 (76.91%), Postives = 384/459 (83.66%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAA--AHTTAIFLHPPLDSSLRLFLRRRPNPISA--IINPSPSPL 60
           MLS+T       TSLSAA         LH P    LRLFLRR PNPISA          L
Sbjct: 1   MLSATAPA----TSLSAAXXXXXXTFLLHTP---PLRLFLRRPPNPISASXXXXXXXXXL 60

Query: 61  AAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTL 120
            AK QVYQPFRPPPSPLPSQYRSLDA GKL+VL+NRLGLWFEYAPLISSLIQEGFTP T+
Sbjct: 61  VAKPQVYQPFRPPPSPLPSQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTI 120

Query: 121 EEITGISGVQQNIFVVGAQVRDSLVQS-NNSDPDVIAAFDTSGAELLYEIRLLSTEKRAA 180
           EEITGI GVQQN  VVGAQVR+SLVQ+ N++DPD+IAAFDT GAELLYEIRLL+ EKRAA
Sbjct: 121 EEITGIGGVQQNTLVVGAQVRESLVQTINDADPDLIAAFDTGGAELLYEIRLLNAEKRAA 180

Query: 181 AAKYIVENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQ 240
           AA+YIVENRLD KGAQDLARAMKDFPRRRG+KGWESF+YD PGDCLAFM+YRLSREY+N 
Sbjct: 181 AARYIVENRLDGKGAQDLARAMKDFPRRRGDKGWESFNYDYPGDCLAFMHYRLSREYSNM 240

Query: 241 SERRTAALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAE 300
           SE RTAALE+ALKV VT++AR LIV DLE +G+GK+  EEEI A VRVPVVRLKIGEVAE
Sbjct: 241 SEARTAALEDALKVAVTEEARSLIVRDLEREGEGKDEVEEEIEAGVRVPVVRLKIGEVAE 300

Query: 301 ATTVVVMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGG 360
           ATTVVV+PVC   +G  GVGEAPMEVRSEGEFGVVVAE+ W RWVVLP WEP+AGL K G
Sbjct: 301 ATTVVVLPVCNGEEGGKGVGEAPMEVRSEGEFGVVVAEEGWRRWVVLPGWEPIAGLGK-G 360

Query: 361 GVVVAFEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKV 420
           GVVVAF+DARALPWRVNRWYKEE ILVV DRSRKEV AGDGFYLT AT  G D  GELKV
Sbjct: 361 GVVVAFKDARALPWRVNRWYKEEAILVVADRSRKEVEAGDGFYLTGAT--GSD--GELKV 420

Query: 421 ERGNALMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           +RG+ LMEM +KESLGTVLLVVRPPK+M+DDQLSDEDWD
Sbjct: 421 QRGSELMEMGLKESLGTVLLVVRPPKDMDDDQLSDEDWD 447

BLAST of Cla97C06G119120 vs. TrEMBL
Match: tr|A0A1S3CHL8|A0A1S3CHL8_CUCME (rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501013 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 1.6e-225
Identity = 406/454 (89.43%), Postives = 425/454 (93.61%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQ 60
           MLSST T ANSLTSLS+ AHTTAIFLH P+DS LRLFLRRR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEIT 120
           QVYQPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWF+YAPLISSL+QEGFTP TLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQSN+SDPDVIA+FDTSGAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRT 240
           VENRLDSKGAQDLARA+KDFPRR+G++GWE FDYDS GDCLA+MYYRLSREYNN SERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVV 300
           AALEEALKVVVT+KAR+LIVGDLE KGDGK+G EEE GA VRVPVVRLKIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVA 360
           VMPVCKAG+GE GVGEAPMEVRSEG+FGVVVAEK WSRWVVLP WEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNA 420
           F+DAR LPWRVNRWYKEEPILVV DRSRKEVVAGDGFYL   TVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L EM VKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Cla97C06G119120 vs. TrEMBL
Match: tr|A0A0A0LY43|A0A0A0LY43_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 4.1e-221
Identity = 400/454 (88.11%), Postives = 423/454 (93.17%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQ 60
           MLSST T ANSL+SLS+ AHTT+IFLH P DS LRLFLRRR NPISAIINPS S LAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEIT 120
           QVYQPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTP  LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVR+SL+QSN+SDPDVIA+FDT GAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRT 240
           VENRLDSKGAQDLARAMKDFPRRRG+KGWE FDYD  GDCLA+MYYRLSREYN+ +ERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVV 300
           AALEEALKVVVT+KARDLIVGDLEGKGDGK+G EEEIGAAV+VPVVR+KIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVA 360
           VMPVCKAG+GE GVGEAPMEVRSEGEFGVVVAEK WSRWVVLP WEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNA 420
           FEDAR LPWRVNRWYKEEPILVV DRSR+EVVAGDGFYL    +GGGDGGG+LKVERGNA
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYL----MGGGDGGGDLKVERGNA 420

Query: 421 LMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           LMEM VKESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

BLAST of Cla97C06G119120 vs. TrEMBL
Match: tr|A0A2P5DJM2|A0A2P5DJM2_9ROSA (Rubisco accumulation factor OS=Trema orientalis OX=63057 GN=TorRG33x02_249610 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 4.8e-153
Identity = 301/455 (66.15%), Postives = 351/455 (77.14%), Query Frame = 0

Query: 8   TANSLTSLSAAAH----TTAIFLHP--PLDSSLRLFLRRRPN--PISAIINPSPSPLAAK 67
           TAN+L  LS   H    ++  FL P  P     R  L  +P+  PISA   PSP+P   +
Sbjct: 5   TANTLRPLSPFHHDKLLSSFTFLTPQAPHLQHPRSTLHSKPSLKPISATFTPSPNP--QQ 64

Query: 68  QQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEI 127
           QQ+YQPFRPPPSPLPSQ+RSLD   +L VL+NRLGLWFEYAP+I SLIQEGFTP ++EE 
Sbjct: 65  QQLYQPFRPPPSPLPSQFRSLDTASRLEVLANRLGLWFEYAPIIPSLIQEGFTPPSIEEA 124

Query: 128 TGISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKY 187
           TGISGV+QN  VV AQVRDSL+QS  +DP+++AAFD  GAELLYEIRLLS ++R+AAA Y
Sbjct: 125 TGISGVEQNRLVVAAQVRDSLLQS-KTDPEIVAAFDLGGAELLYEIRLLSAQQRSAAAGY 184

Query: 188 IVENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERR 247
           I  N  D+KGAQDLARAMKDFPRRRG+KGWESF Y  PGDCL+FMYYR SRE+ N SE+R
Sbjct: 185 IAANGFDAKGAQDLARAMKDFPRRRGDKGWESFAYARPGDCLSFMYYRQSREHKNPSEQR 244

Query: 248 TAALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTV 307
           TAALE+ALKV  T+ A+  ++ DL+ +   +EG + EIG AVRVPVVRLKIGEVAEA+TV
Sbjct: 245 TAALEQALKVAETEGAKSRVLQDLKDREGDREGAKGEIGEAVRVPVVRLKIGEVAEASTV 304

Query: 308 VVMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVV 367
            V+PVC+A + E  V EAP E R+EGEFGVVVAEK W RWVVLP WEPV GL K GGVV+
Sbjct: 305 AVLPVCRAEEREKEVLEAPGECRTEGEFGVVVAEKGWKRWVVLPGWEPVVGLGK-GGVVI 364

Query: 368 AFEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGN 427
           +F DARALPW+ NRWYKEE ILVV DR RKEV A DGFYL  A  G GDGG  LKV RG+
Sbjct: 365 SFSDARALPWKTNRWYKEEAILVVADRERKEVAADDGFYLVAAN-GEGDGGDGLKVVRGS 424

Query: 428 ALMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           AL E  VKESLGTV+LVVRPP+E  D+QLSDEDW+
Sbjct: 425 ALKETGVKESLGTVVLVVRPPREETDNQLSDEDWE 454

BLAST of Cla97C06G119120 vs. TrEMBL
Match: tr|M5WAU1|M5WAU1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G348600 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 2.9e-150
Identity = 278/411 (67.64%), Postives = 334/411 (81.27%), Query Frame = 0

Query: 44  PISAIINPSPSPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLI 103
           PISA +  +PS      QVYQPFRPPPSP+P+++RSLDA G+L +L+NRLGLW+E+APLI
Sbjct: 52  PISATL--TPSXXXXXXQVYQPFRPPPSPVPAKFRSLDANGRLEILANRLGLWYEFAPLI 111

Query: 104 SSLIQEGFTPSTLEEITGISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLY 163
            SL+QEGFTP T+EE+TGISGV+QN  VV AQVRDSLVQS  +DP ++A FDT G+ELLY
Sbjct: 112 PSLLQEGFTPPTIEEVTGISGVEQNRLVVAAQVRDSLVQS-KTDPKILAEFDTGGSELLY 171

Query: 164 EIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAF 223
           EIRLLS ++RAAAA+YI+EN+LD+KG QDLAR+MKDFPRRRG+KGWESFDY  PGDCL F
Sbjct: 172 EIRLLSVQQRAAAARYIIENKLDAKGTQDLARSMKDFPRRRGDKGWESFDYAHPGDCLGF 231

Query: 224 MYYRLSREYNNQSERRTAALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRV 283
           +YYR +RE+ N SE RTAALE+ALKV  TDKA+ +I+ DLEG+ D KEG E ++   VRV
Sbjct: 232 IYYRQAREHKNPSEPRTAALEQALKVAGTDKAKKIILTDLEGETDEKEGREGDVIDVVRV 291

Query: 284 PVVRLKIGEVAEATTVVVMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLP 343
           PVVRLK GEVAE++ VV++PVC+A + +  V EAP E  SEGEFGVVVAEK W RWVVLP
Sbjct: 292 PVVRLKFGEVAESSKVVILPVCRADEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLP 351

Query: 344 AWEPVAGLVKGGGVVVAFEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEAT 403
            WEPV GL K GGVVV+F DAR LPW+VNRWYKEEPIL+V DRS+KEV A DGFYL  A 
Sbjct: 352 GWEPVVGLGK-GGVVVSFSDARVLPWKVNRWYKEEPILLVADRSKKEVTADDGFYLA-AV 411

Query: 404 VGGGDGGGELKVERGNALMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
            GGG G    KV RG+AL E  VKESLGTV+++VRPP++  DDQLS+EDW+
Sbjct: 412 EGGGLG---FKVVRGSALKETGVKESLGTVVMIVRPPRDETDDQLSEEDWE 454

BLAST of Cla97C06G119120 vs. TrEMBL
Match: tr|W9RQR4|W9RQR4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024527 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 7.2e-149
Identity = 292/455 (64.18%), Postives = 351/455 (77.14%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAII-NPSPSPLAAK 60
           MLS T+ T    +S     H + + L  P   SL+        PISA   NP P P  ++
Sbjct: 1   MLSLTSNTLKPFSSF----HPSFLLLSKP---SLK--------PISATFSNPFPPP--SQ 60

Query: 61  QQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEI 120
           QQ+YQPFRPPPSPLP+Q+RSLD + +L VL++RLGLWFEYAPLI SLIQEGFTP +LEE 
Sbjct: 61  QQLYQPFRPPPSPLPNQFRSLDVKSRLEVLADRLGLWFEYAPLIPSLIQEGFTPPSLEEA 120

Query: 121 TGISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKY 180
           TGISG++QN  VV AQVRDSL+QS N+DP V++AFD  GAELLYEIRLL+ ++R+AAA Y
Sbjct: 121 TGISGIEQNHLVVAAQVRDSLIQS-NTDPAVVSAFDLGGAELLYEIRLLNAQQRSAAASY 180

Query: 181 IVENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERR 240
           I  N LD++G QDLAR+++DFPRRRG+KGWESFDY  PGDCLAFMY+R SRE+   SE+R
Sbjct: 181 IAANGLDARGVQDLARSVRDFPRRRGDKGWESFDYTQPGDCLAFMYFRQSREHKKPSEQR 240

Query: 241 TAALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTV 300
           TAALE+AL   VT++A+  ++ +L  +G+G+   E EIG  VRVPVVRLKIGEVAEA+TV
Sbjct: 241 TAALEQALSAAVTERAKGRVLEELNAEGEGEITGEGEIGEEVRVPVVRLKIGEVAEASTV 300

Query: 301 VVMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVV 360
            V+PVCKAG+ + G+ EAP E  +EGEFGVVVAEK W+RWVVLPAWEPVAGL K GGVVV
Sbjct: 301 AVLPVCKAGERDKGLEEAPRECWTEGEFGVVVAEKGWARWVVLPAWEPVAGLGK-GGVVV 360

Query: 361 AFEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGN 420
           +F DAR LPWR NRWYKEE ILVV DR RKEV   +GFYL      GGD GG+LKVERG+
Sbjct: 361 SFSDARVLPWRTNRWYKEEAILVVADRDRKEVSVDNGFYLV-----GGD-GGDLKVERGS 420

Query: 421 ALMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           AL E  V+ESLGTV+LVVRPPK+  DDQLSDEDW+
Sbjct: 421 ALKETGVEESLGTVVLVVRPPKDAVDDQLSDEDWE 430

BLAST of Cla97C06G119120 vs. Swiss-Prot
Match: sp|Q9LKR8|RAF1_ARATH (Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.1 PE=1 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.7e-121
Identity = 251/456 (55.04%), Postives = 322/456 (70.61%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQ 60
           MLS T TT +S  S+   + T   F   P      ++ +      SA+I  S      KQ
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP------VYRKPFTTITSALIPASNRQAPPKQ 60

Query: 61  QVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEIT 120
           Q+YQPFRPPPSP+P ++RSLD  GK+ VL++RLGLWFEYAPLISSL  EGFTP ++EE+T
Sbjct: 61  QLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYI 180
           GISGV+QN  +VGAQVRDSLVQS  + P++IAAFDT+GAELLYEIRLL+T +R AAA+YI
Sbjct: 121 GISGVEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRT 240
           V++  D+KGA DLARA+KDFP RRG+ G   FDY+ PGDCL+FM YR SRE+ + SE RT
Sbjct: 181 VDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRT 240

Query: 241 AALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVV 300
             LE+AL+  VT+KA+  ++ +L G+ + +   EEEI   +RVPVVRL+ GEVA A++VV
Sbjct: 241 TLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVV 300

Query: 301 VMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVA 360
           V+PVCKA +GE  + EAPME  S GEFGVV AEK+WSRWVVLP W+PV  + K  GV V+
Sbjct: 301 VLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVS 360

Query: 361 FEDAR-ALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGN 420
           F D R  LPW      K E I+VV+DR +K V A +G+Y      GG      +K++RG 
Sbjct: 361 FSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG------MKLDRGL 420

Query: 421 ALMEMEVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 455
            L E  V ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 VLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

BLAST of Cla97C06G119120 vs. Swiss-Prot
Match: sp|Q9SR19|RAF2_ARATH (Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.2 PE=1 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-118
Identity = 234/445 (52.58%), Postives = 306/445 (68.76%), Query Frame = 0

Query: 21  TTAIFLHP------PLDSSLRLFLRRRPNPISAIINPSPSPLAAKQQVYQPFRPPPSPLP 80
           T  +F +P      PL  ++   +     P  +  N  P    A+QQ+YQPFRPP SP+P
Sbjct: 17  THGLFTNPITRPVNPLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLYQPFRPPSSPIP 76

Query: 81  SQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEITGISGVQQNIFVVGA 140
           +Q+RSLD+ GK+ +L+ R+ LWFEYAPLISSL  +GFTP T+EE+TGIS ++QN  +VGA
Sbjct: 77  TQFRSLDSAGKIEILAGRMALWFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVGA 136

Query: 141 QVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLA 200
           QVRDS++QS + +P++I+AFDT GAELLYEIRLLST +R AAA +I++  +DSKGAQDLA
Sbjct: 137 QVRDSILQSIH-EPELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLA 196

Query: 201 RAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRTAALEEALKVVVTDK 260
           RA+KD+P RRG+ GW  FDY+ PGDCL+F+YYR SRE  N S++RT+ L +AL V  ++K
Sbjct: 197 RAIKDYPNRRGDVGWLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSMLLQALGVAESEK 256

Query: 261 ARDL----IVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVVVMPVCKAGKG 320
           A++     + GD                  +R+PVVRLK GEVAEAT+VVV+PVCKA +G
Sbjct: 257 AKNRLNTELYGDKXXXXXXXXXXXXXXXXXIRIPVVRLKFGEVAEATSVVVLPVCKAEEG 316

Query: 321 EIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVAFEDARALPWR 380
           E  + EAPME+ + G+F VV AEK W RWVVLP+W PVA + KGG  V   +D + LPW 
Sbjct: 317 EKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD 376

Query: 381 VNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNALMEMEVKESL 440
                KEEP+LVV DR R  V A DG+YL  A  G       LK+E+G+ L   EVKESL
Sbjct: 377 ----GKEEPLLVVADRVRNVVEADDGYYLVVAENG-------LKLEKGSDLKAREVKESL 436

Query: 441 GTVLLVVRPPKEMEDD-QLSDEDWD 455
           G V+LVVRPP+E +DD Q S ++WD
Sbjct: 437 GMVVLVVRPPREDDDDWQTSHQNWD 449

BLAST of Cla97C06G119120 vs. Swiss-Prot
Match: sp|Q7XDY9|RAF1_ORYSJ (Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RAF1 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.8e-76
Identity = 182/437 (41.65%), Postives = 245/437 (56.06%), Query Frame = 0

Query: 46  SAIINPSPSPLAAKQQVYQ-PFRPPPSPLPSQ---------------YRSLDAEGKLNVL 105
           + I+ P   P+    +  + PF PPP+  P Q               Y+ LD   +L VL
Sbjct: 47  AVILGPDGRPIGGGPRDNKLPFTPPPTAPPDQLXXXXXXXXXXXXXXYKDLDLGQRLAVL 106

Query: 106 SNRLGLWFEYAPLISSLIQEGFTPSTLEEITGISGVQQNIFVVGAQVRDSLVQSNNSDP- 165
            +RLGLW EYAPLIS+L +EGFTPS++EE TGISGV+QN  VV  QVRDSLV      P 
Sbjct: 107 RDRLGLWHEYAPLISALSREGFTPSSIEEATGISGVEQNSVVVATQVRDSLVADEGGFPA 166

Query: 166 DVIAAFDT-SGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGEK 225
           +++  FD+  G ELLYE+R L+  +RA AA++ ++ RL+ +G ++LAR+MKDFP+RRG+ 
Sbjct: 167 ELLRYFDSYGGPELLYELRFLNARQRADAARHAIDRRLEPRGVRELARSMKDFPQRRGDD 226

Query: 226 GWESFDYDSPGDCLAFMYYRLSREYNNQSERRTAALEEALKVV----------VTDKARD 285
           GWE+F  D+PGDCLAF  +R SRE  + +E   A LE AL+VV                 
Sbjct: 227 GWEAFTRDNPGDCLAFARFRQSREAID-AEDSVAELERALEVVDXXXXXXXXXXXXXRXX 286

Query: 286 LIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVVVMPVCKAGKGEIGVGEA 345
                                    VPVVRL  GEVAEATTV+++PV + G G   +  A
Sbjct: 287 XXXXXXXXXXXXXXXXXXXXXXRPAVPVVRLMYGEVAEATTVLLLPVVREGDGGEALAHA 346

Query: 346 PMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVAFEDARALPWRVNRWYKE 405
           P   R++ + G+V  +K W+RW V+P W PVA  V G  VV+   D R LPWR     + 
Sbjct: 347 PRRTRTDADLGMVEVDKGWTRWAVVPGWGPVAE-VAGEAVVIELADGRTLPWRS---AEA 406

Query: 406 EPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNALMEMEVKESLGTVLLVV 455
           E +LVV +R R+EVV  DG Y+ E         G         L    V E+   VL+VV
Sbjct: 407 ERVLVVANRGRREVVE-DGIYVVERE-------GRXXXXXXXKLAAEGVGEAAAEVLVVV 466

BLAST of Cla97C06G119120 vs. Swiss-Prot
Match: sp|B4FR29|RAF1_MAIZE (Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.6e-69
Identity = 168/416 (40.38%), Postives = 229/416 (55.05%), Query Frame = 0

Query: 52  SPSPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGF 111
           +P P+A                    R+LD   +L +L +R+GLW EYAPLISSL ++GF
Sbjct: 62  TPPPMAPXXXXXXXXXXXXXXXXXSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRDGF 121

Query: 112 TPSTLEEITGISGVQQNIFVVGAQVRDSLVQSNNS--DPDVIAAFDT-SGAELLYEIRLL 171
            PS+++E TGISGV+QN  VV +QVRDSL+    +   PD++  FD+  G E+LYE+R L
Sbjct: 122 NPSSIQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELRFL 181

Query: 172 STEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRL 231
           +  +RA AA++ +  RL+ KG ++LARAMK FPR RGE+GWE+F  DSP DCLAF  +R 
Sbjct: 182 NARQRADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARFRQ 241

Query: 232 SREYNNQSERRTAALEEALKVVVTDKARDLIVGDLE----------GKGDGKEGDEEEIG 291
           SRE  +  + R A LE AL+VV T+  R  +  +LE                        
Sbjct: 242 SREAIDVQD-RVAELERALQVVETESGRARVELELERXXXXXXXXXXXXXXXXXXXXXXS 301

Query: 292 AAVRVPVVRLKIGEVAEATTVVVMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSR 351
               V VVRL+ GEVAEATTV+++PV +   G   +  AP   +++   GVV  ++ W+R
Sbjct: 302 LRPGVTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAWAR 361

Query: 352 WVVLPAWEPVAGLVKGGGVVVAFEDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFY 411
           W V+P W PVA       VVV   D R LPWR++    EEP+LV+ +RS+KEVV  +G Y
Sbjct: 362 WAVVPGWGPVAE-AADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEVVE-EGVY 421

Query: 412 LTEATVGGGDGGGELKVERGNALMEMEVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           + E         G L VERG  L E  +                      SDE+WD
Sbjct: 422 VLERE-------GRLVVERGKKLAEQGI-XXXXXXXXXXXXXXXXXXXXXSDEEWD 463

BLAST of Cla97C06G119120 vs. TAIR10
Match: AT5G28500.1 (unknown protein)

HSP 1 Score: 437.6 bits (1124), Expect = 9.6e-123
Identity = 251/456 (55.04%), Postives = 322/456 (70.61%), Query Frame = 0

Query: 1   MLSSTTTTANSLTSLSAAAHTTAIFLHPPLDSSLRLFLRRRPNPISAIINPSPSPLAAKQ 60
           MLS T TT +S  S+   + T   F   P      ++ +      SA+I  S      KQ
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP------VYRKPFTTITSALIPASNRQAPPKQ 60

Query: 61  QVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEIT 120
           Q+YQPFRPPPSP+P ++RSLD  GK+ VL++RLGLWFEYAPLISSL  EGFTP ++EE+T
Sbjct: 61  QLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYI 180
           GISGV+QN  +VGAQVRDSLVQS  + P++IAAFDT+GAELLYEIRLL+T +R AAA+YI
Sbjct: 121 GISGVEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRT 240
           V++  D+KGA DLARA+KDFP RRG+ G   FDY+ PGDCL+FM YR SRE+ + SE RT
Sbjct: 181 VDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRT 240

Query: 241 AALEEALKVVVTDKARDLIVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVV 300
             LE+AL+  VT+KA+  ++ +L G+ + +   EEEI   +RVPVVRL+ GEVA A++VV
Sbjct: 241 TLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVV 300

Query: 301 VMPVCKAGKGEIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVA 360
           V+PVCKA +GE  + EAPME  S GEFGVV AEK+WSRWVVLP W+PV  + K  GV V+
Sbjct: 301 VLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVS 360

Query: 361 FEDAR-ALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGN 420
           F D R  LPW      K E I+VV+DR +K V A +G+Y      GG      +K++RG 
Sbjct: 361 FSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG------MKLDRGL 420

Query: 421 ALMEMEVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 455
            L E  V ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 VLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

BLAST of Cla97C06G119120 vs. TAIR10
Match: AT3G04550.1 (unknown protein)

HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-119
Identity = 234/445 (52.58%), Postives = 306/445 (68.76%), Query Frame = 0

Query: 21  TTAIFLHP------PLDSSLRLFLRRRPNPISAIINPSPSPLAAKQQVYQPFRPPPSPLP 80
           T  +F +P      PL  ++   +     P  +  N  P    A+QQ+YQPFRPP SP+P
Sbjct: 17  THGLFTNPITRPVNPLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLYQPFRPPSSPIP 76

Query: 81  SQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPSTLEEITGISGVQQNIFVVGA 140
           +Q+RSLD+ GK+ +L+ R+ LWFEYAPLISSL  +GFTP T+EE+TGIS ++QN  +VGA
Sbjct: 77  TQFRSLDSAGKIEILAGRMALWFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVGA 136

Query: 141 QVRDSLVQSNNSDPDVIAAFDTSGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLA 200
           QVRDS++QS + +P++I+AFDT GAELLYEIRLLST +R AAA +I++  +DSKGAQDLA
Sbjct: 137 QVRDSILQSIH-EPELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLA 196

Query: 201 RAMKDFPRRRGEKGWESFDYDSPGDCLAFMYYRLSREYNNQSERRTAALEEALKVVVTDK 260
           RA+KD+P RRG+ GW  FDY+ PGDCL+F+YYR SRE  N S++RT+ L +AL V  ++K
Sbjct: 197 RAIKDYPNRRGDVGWLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSMLLQALGVAESEK 256

Query: 261 ARDL----IVGDLEGKGDGKEGDEEEIGAAVRVPVVRLKIGEVAEATTVVVMPVCKAGKG 320
           A++     + GD                  +R+PVVRLK GEVAEAT+VVV+PVCKA +G
Sbjct: 257 AKNRLNTELYGDKXXXXXXXXXXXXXXXXXIRIPVVRLKFGEVAEATSVVVLPVCKAEEG 316

Query: 321 EIGVGEAPMEVRSEGEFGVVVAEKEWSRWVVLPAWEPVAGLVKGGGVVVAFEDARALPWR 380
           E  + EAPME+ + G+F VV AEK W RWVVLP+W PVA + KGG  V   +D + LPW 
Sbjct: 317 EKKILEAPMEIIAGGDFKVVEAEKGWKRWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD 376

Query: 381 VNRWYKEEPILVVVDRSRKEVVAGDGFYLTEATVGGGDGGGELKVERGNALMEMEVKESL 440
                KEEP+LVV DR R  V A DG+YL  A  G       LK+E+G+ L   EVKESL
Sbjct: 377 ----GKEEPLLVVADRVRNVVEADDGYYLVVAENG-------LKLEKGSDLKAREVKESL 436

Query: 441 GTVLLVVRPPKEMEDD-QLSDEDWD 455
           G V+LVVRPP+E +DD Q S ++WD
Sbjct: 437 GMVVLVVRPPREDDDDWQTSHQNWD 449

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008462710.12.5e-22589.43PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo][more]
XP_004142574.16.2e-22188.11PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis sativus] >KGN66... [more]
XP_023531170.14.0e-18380.42rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022965491.15.7e-18279.95rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita maxima][more]
XP_022933155.11.4e-18076.91rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
tr|A0A1S3CHL8|A0A1S3CHL8_CUCME1.6e-22589.43rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350... [more]
tr|A0A0A0LY43|A0A0A0LY43_CUCSA4.1e-22188.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1[more]
tr|A0A2P5DJM2|A0A2P5DJM2_9ROSA4.8e-15366.15Rubisco accumulation factor OS=Trema orientalis OX=63057 GN=TorRG33x02_249610 PE... [more]
tr|M5WAU1|M5WAU1_PRUPE2.9e-15067.64Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G348600 PE=4 SV=1[more]
tr|W9RQR4|W9RQR4_9ROSA7.2e-14964.18Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024527 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|Q9LKR8|RAF1_ARATH1.7e-12155.04Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q9SR19|RAF2_ARATH2.3e-11852.58Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q7XDY9|RAF1_ORYSJ3.8e-7641.65Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=... [more]
sp|B4FR29|RAF1_MAIZE2.6e-6940.38Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV... [more]
Match NameE-valueIdentityDescription
AT5G28500.19.6e-12355.04unknown protein[more]
AT3G04550.11.3e-11952.58unknown protein[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR037494RAF1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009536 plastid
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G119120.1Cla97C06G119120.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037494Rubisco accumulation factor 1PANTHERPTHR35299FAMILY NOT NAMEDcoord: 10..454
NoneNo IPR availablePANTHERPTHR35299:SF2RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATEDcoord: 10..454