Lsi06G007010 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCGCGGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCCGGGCTCGCCGACCGGTCTGGCCACGAGAAAGGTGGCCACGCCAAGTTCGAGTGCCCACACTGCAAGATTACGGCGCCTGATGTCAAGTCTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAAGAGGACAAGGTTGTGAATCTCCACGCTGTTCGTATTGCTGCCGAGGCGTCGAAGGGGAAACCGGGTGTGAGAGGCAGCTACAAGAAGTGAAGAAAAAATCCGGATTCATGAGGATGGATGATGATGATTATGGTGGGTGGGCTCAATTCTATGGTATTGGGTACTTTTGTTTTTTTTTTTCTTTAAAAAGAAATCTTGGTCCCTCTATGTCTTCTCTCTGGTGCTGATGGAAGGTGGTTTTTAACTTGTAAGGTGTTTGAGTAAAACATATTCGATGTCCTTGGAGCTAAGGTCTTTGAAATTATGTATATTACATAAAAACATGATCATTGTTGTTATGGTAACGATGGAGGTGTTCATGTTCTTATCGTCTCTGCTTATCATGTCATGCTTAATTTTAGTAAGAATTAGAGTGGGCTTAAGATGCTTATGGCTTGAGAATATGTTGTGTGATTTTTGTTGTTATTTTGATATTTAGAAAGTAGATTAATGGGGAATGATTAATGGTTGACCCAGCTATGAAAGGAGGAAATTCGTAACCACAAATGTCTCTGTGGTCGTCATATCTTCACTTATGTAAGTTCAATGTTTGATATTTATATCGAAGAAGTTACTTAGAGGTTTGCATAACTTGTTAAACAACGATGTTTTAGGAGAAAAGTAGTTTTCTTTCAGGGCATCAAATATTCTGGGAATAAGTTTTCATTGTCTTACTTTTTTTTTTCTTTTTGATAGTTGTGTTTGTTTAACCGTTTGGTATAATATAGCTGAAGTTGCGAATCAGATGACAAACGACCTTACTTGAACAGGATTTGTTCTATAAGTTGTACAACTTTGTTGCTAGTTTGGATTGGCAAGCGCAAGTATCTTCGTTGTTGTTTTTCTTTAACCAAGTCTTTGTAATAAGTTAATGCCTCATCTCTTTGTTCTACCTCATGAGTGCCTGTGAGTTTGAGTTTGGGTTGGCCTTTTTCTTTCTTCAGAGAAGCTTTATAAATGAGATCTTTCATAGCAATCTGTCAATATCTGCTGTGTATTTATATTTGCATATTTGTGTTGTCTTCACTCAGGCTCCCATTTTACCTTTTTATCACCTTGCTTTTGGGCTCCAAGGAGCTACTGCACCACAATTCTCTTCTTCTATAGTGGTTAATTTGAATCCTCTTGGTATCAGGCTCGGTTTAGATTCCAGTGTAATTAGTGTTTAG ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCGCGGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCCGGGCTCGCCGACCGGTCTGGCCACGAGAAAGGTGGCCACGCCAAGTTCGAGTGCCCACACTGCAAGATTACGGCGCCTGATGTCAAGTCTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAAGAGGACAAGGTTGTGAATCTCCACGCTGTTCGTATTGCTGCCGAGGCGTCGAAGGGGAAACCGGGTGCTCCCATTTTACCTTTTTATCACCTTGCTTTTGGGCTCCAAGGAGCTACTGCACCACAATTCTCTTCTTCTATAGTGGTTAATTTGAATCCTCTTGGTATCAGGCTCGGTTTAGATTCCAGTGTAATTAGTGTTTAG ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCGCGGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCCGGGCTCGCCGACCGGTCTGGCCACGAGAAAGGTGGCCACGCCAAGTTCGAGTGCCCACACTGCAAGATTACGGCGCCTGATGTCAAGTCTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAAGAGGACAAGGTTGTGAATCTCCACGCTGTTCGTATTGCTGCCGAGGCGTCGAAGGGGAAACCGGGTGCTCCCATTTTACCTTTTTATCACCTTGCTTTTGGGCTCCAAGGAGCTACTGCACCACAATTCTCTTCTTCTATAGTGGTTAATTTGAATCCTCTTGGTATCAGGCTCGGTTTAGATTCCAGTGTAATTAGTGTTTAG MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPGAPILPFYHLAFGLQGATAPQFSSSIVVNLNPLGIRLGLDSSVISV
BLAST of Lsi06G007010 vs. TrEMBL
Match: A0A0A0LXT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G657510 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 7.4e-46 Identity = 91/98 (92.86%), Postives = 97/98 (98.98%), Query Frame = 1
BLAST of Lsi06G007010 vs. TrEMBL
Match: A0A0L9U3Q3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g040000 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.4e-41 Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 1
BLAST of Lsi06G007010 vs. TrEMBL
Match: A0A0S3RSG7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G069000 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.4e-41 Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 1
BLAST of Lsi06G007010 vs. TrEMBL
Match: A0A067JSC6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18024 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 4.7e-40 Identity = 78/98 (79.59%), Postives = 91/98 (92.86%), Query Frame = 1
BLAST of Lsi06G007010 vs. TrEMBL
Match: T2DMN3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.1e-40 Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 1
BLAST of Lsi06G007010 vs. TAIR10
Match: AT3G02790.1 (AT3G02790.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 160.6 bits (405), Expect = 7.1e-40 Identity = 78/98 (79.59%), Postives = 84/98 (85.71%), Query Frame = 1
BLAST of Lsi06G007010 vs. TAIR10
Match: AT5G16470.1 (AT5G16470.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 152.5 bits (384), Expect = 1.9e-37 Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 1
BLAST of Lsi06G007010 vs. NCBI nr
Match: gi|659085963|ref|XP_008443699.1| (PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 3.7e-46 Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 1
BLAST of Lsi06G007010 vs. NCBI nr
Match: gi|778664122|ref|XP_011660225.1| (PREDICTED: uncharacterized protein LOC101210666 [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45 Identity = 91/98 (92.86%), Postives = 97/98 (98.98%), Query Frame = 1
BLAST of Lsi06G007010 vs. NCBI nr
Match: gi|920693794|gb|KOM37019.1| (hypothetical protein LR48_Vigan03g040000 [Vigna angularis]) HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40 Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 1
BLAST of Lsi06G007010 vs. NCBI nr
Match: gi|950962617|ref|XP_014498140.1| (PREDICTED: uncharacterized protein LOC106759468 [Vigna radiata var. radiata]) HSP 1 Score: 173.3 bits (438), Expect = 3.0e-40 Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 1
BLAST of Lsi06G007010 vs. NCBI nr
Match: gi|1009118290|ref|XP_015875779.1| (PREDICTED: uncharacterized protein LOC107412516 [Ziziphus jujuba]) HSP 1 Score: 172.6 bits (436), Expect = 5.1e-40 Identity = 79/98 (80.61%), Postives = 94/98 (95.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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