CsaV3_1G044540 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G044540
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	zinc finger (C2H2 type) family protein
Location	chr1 : 29936978 .. 29940176 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAGGGTTTCTCCCCCAATCCTCTCTGTCTATCAACAATTTCCCCCTCCCATTCGCCTTCTATTCTCTATCAACAAATTCAAAGAACCCCCCATCGATTTCCTTTCTTTGTTTTTAGACACCAAAAACAAGCAACCTTCAATCAGCCATGACGGGTAAGGCGAAGCCCAAGAAGCACACAGCGAAGGAGATCGCAGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGTAAGGCTGGCCTCGCCGACCGCTCTGGCCATGAGAAAGGCGGCCACGCCAAGTTTGAATGCCCCTACTGCAAGATTACGGCGCCTGATGTAAAGTCTATGCAGATTCATCACGAATCCAAGCATCCCAAAGTCCCTTTTGAGGAGGAAAAGGTTATAAATCTCCATGCTGTTCGTGTTGCTGCCGAGGCGTCCAAGACAAAACCGGGTGTCAGAGGCAGCTATAAAAAGTGAAGATAATCCGGATTCATGAGGAGATGGATGGTGGGTGGGCTCAATTTTATGGTATTGGGTACTTTTGTTTTCGTCTTTTTTTTTAAAAAAAAAAAAAATCTTGGTTCTACGTCTTCTCTCTGGTGCTGATGGAAAGTGGCTTTAACTTGTAAGGTGTTTGAGTAAAACATATTCGGTGTCCTTGGAGCTGAGGTCTTTGCAATTATGTATATTACATAAAAACATGATCATTGTTGTTATGGTAACCATGGAGGTGTTCATGTTCTTATTGTCTCTGTTTATCATGTCATGTTTCATTTTTATTTAAGAATTAGAGTGAGCTTAATATGTTTTTGGATTGCTTTTCTGTGCTTAAGATGTTTATTGCTTGAGAATATTGTGTGATTTTTATTGGTACTTTCATGTTTAGAAAGTAGATTAATGGGGAATGATTGATGGTTGACCCAGCTATGAAAGGAGGAAATTCGTAATTCTCGATGTCTCTGTGGTCGTCATGGCTTTACTTGTATAAGTTCAATGTTTTATATTTATATGGTAGTTACTTGGGGTTTACATAAATTTTTAAAATCTACCATGTTTCAGGAGATAAAGTAGTTATCTGGCATGGCATCTCAGGAGTTTTACCTTTTTGTGGTAGTTGTGTTTACTTTTACAGAATTGAATTATGTTGGCTGTTATAAGAGCTTAACCGTTTGGGATAGCTGTTGGAAATCAGATGACGACACAAGTATCTTTATTTCTTTGTTGGTTTAGTTCAGTGGTTGCATAGATGGACCGAATCATCAATTCTTGGGATTGATAGTTTGTGTCGGCTTGCATTGGTATGTGCAAGTATGTTGTCATGGTTGTTCTTTAACCAAGTCTTTGCAATAAGTTAATGGCTCATCTTTTTGTCCTACCTCATGAGTGTCTTTGAGTTTTTTTTTTGGGTTGGCATTTTTCTTAGCTTTATTAATGAGATCTTTCATTCCAATCTATGGATATCTATGTACTTATATGAATGTATCTGTGTTCTCTTAACTTAGGCTCCTAGTTTACCTTTTTGTTTTTAACTTGCATTTGGTCTCCAAGGAGCTACTGCACCGTAATCACTCTTTTTTTTTTGCAGCATTCATCCTTAGTGAATTTCAATCCTCTTGGTATCAGACTCGGTTTATAAGGCTTGGTTTTGGTTCTTATGTAAATATATTGTCTAAACTCCTTTTCCTATCCACTTGTACATTCTCTTAAATTCAAAACATCTCCTTGATATTGAGCCAGATCATGTTCTGATGATAGAGCTTTATTATTAGGCCAGGTTTTAGTTGGCCTGGTAAGCTAGATTCTGCTAGTCTATTCGAGAGAAATCCTTCAAAATTTGTTCAAGTCGGTGGTGCATTAAATTGGGAATGATAGAAACGGCATGTTGCTACACTGTTTGGTTTCTTGTGTTCTGTGGTGCTAGTTGTTATTTATGTGGTGTTTCTGCTTTATGCCTTTGTTAGCTGTGTTTACGTTATGGGTTGACATAGTGCTAGAAAAGCTTGTGAGTCATTAAATTGCATCTAAGTTGGCCTAGATACTCAAGGTTTATGTCTCATTTTGGGTTTATGAAATTCAAAGCATAGGTCACGATTGTTGTTCAAGAATTATTTGTGTTTAATGGATGTGGATGAATGTTGTGTGGGGAGACTTTGACGAATGGATTTATGTACATTTTTTATTGGTGTTGTCCGTAGAACTATTGGGTAACACCTATTTCAGGAAAGGTAACAAATGGTACATGACAATTAGTAGTATTTGTGGGGTTGAAATTTTTTGTATAATTTCTTTGGAAAAGGTAACTGAGTTGGAAAATATTGTCCATCTCTCCTTTAAGCCCTCGAATTCCAAGTAAGAACTAAACATTTGTGTCTGTCTACTTTTAGCTTATCCTCTAGTGGTTTTGAATCCAGCAAATACCTTCAAAGCCCAACAAAATACTCAAGTTGTGTGTAGGTCTTGATAGAGATATTTTTGGTATTTCACATTGTTGACATGTAGACTTTTTTTGCTTTTTTTATTTTCAAAATTGAGGAGAAATCTCTCAACGATTCGATCATTACGCAACATTTCCTTCTCACACCAAAGATCTTAATCGTCGTAGTTATTTGAATCGATGACTTCATATGATCAACTAGTCTTACCAAACACCAAAGGGCCATTAGGGCACGTTGATTTGCTGCACTCGAGAATGCAGGCTCCTTACTCAAACTTGCAGTGTCTTTGTACCACAAAGATTACAACTAATGTTAGCATAAATTGATGTATGGAATAGCAACGCAAGAAGATAACCTTCTCATTCCCAGAAACAACAAGATGGACTTCCTGTGACATTTTGATGAGTACATAAATTCCAATAAATTGTTGACTGTATCGACTAACAAGTGTGCCCTACAGTTCACTTTTACGATGGATGTGTGATTGTATGGGATCACTAGACTTTATGACACCAAGAAGTGAAATGTTTACCGTGTGAGTCCCTAACTTGGTGTTTTTATATTCATCATTTCCGATGTTTAACTTTCTAGGCAGAGGCAAGGGTAAAAGAAAGTTGGCTAGTGACAAGAACCTGTGACCATGTCATTTAGGACCATTATGATGATGCTTTCGCGGTTTATTTTGATTTAATGATTTAGAATGACATCACTATTGATAGATGATTTTTTATTTATTTTAAACTTATGAACATTTTTTTATATTTTTACTTGGGAG

mRNA sequence

ATGACGGGTAAGGCGAAGCCCAAGAAGCACACAGCGAAGGAGATCGCAGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGTAAGGCTGGCCTCGCCGACCGCTCTGGCCATGAGAAAGGCGGCCACGCCAAGTTTGAATGCCCCTACTGCAAGATTACGGCGCCTGATGTAAAGTCTATGCAGATTCATCACGAATCCAAGCATCCCAAAGTCCCTTTTGAGGAGGAAAAGGTTATAAATCTCCATGCTGTTCGTGTTGCTGCCGAGGCGTCCAAGACAAAACCGGGTGTCAGAGGCAGCTATAAAAAGTGA

Coding sequence (CDS)

ATGACGGGTAAGGCGAAGCCCAAGAAGCACACAGCGAAGGAGATCGCAGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGTAAGGCTGGCCTCGCCGACCGCTCTGGCCATGAGAAAGGCGGCCACGCCAAGTTTGAATGCCCCTACTGCAAGATTACGGCGCCTGATGTAAAGTCTATGCAGATTCATCACGAATCCAAGCATCCCAAAGTCCCTTTTGAGGAGGAAAAGGTTATAAATCTCCATGCTGTTCGTGTTGCTGCCGAGGCGTCCAAGACAAAACCGGGTGTCAGAGGCAGCTATAAAAAGTGA

Protein sequence

MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVKSMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK

Homology

[Close]

BLAST of CsaV3_1G044540 vs. NCBI nr
Match: XP_011660225.1 (PREDICTED: uncharacterized protein LOC101210666 [Cucumis sativus] >KGN66675.1 hypothetical protein Csa_1G657510 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 3.8e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK
Sbjct: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 105

[Close]

BLAST of CsaV3_1G044540 vs. NCBI nr
Match: XP_008443699.1 (PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 2.3e-49
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHESKHPK+PFEE+KV NLHAVRV AEASK KPGVRGSYKK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKPKPGVRGSYKK 105

[Close]

BLAST of CsaV3_1G044540 vs. NCBI nr
Match: XP_022961022.1 (uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022961023.1 uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022988627.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988628.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988629.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988631.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988632.1 uncharacterized protein LOC111485822 [Cucurbita maxima])

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 95/105 (90.48%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAATTNRGGGKAGLADRSG EKGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHPK+P+EE+KV+NLHAVRVAAEASK KPGVRGS+KK
Sbjct: 61  TMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK 105

[Close]

BLAST of CsaV3_1G044540 vs. NCBI nr
Match: XP_023516233.1 (uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo] >XP_023516234.1 uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47
Identity = 94/105 (89.52%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAATTNRGGGKAGLADRSG EKGGHAKFECP+CK+TAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKVTAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHPK+P+EE+KV+NLHAVRVAAEASK KPGVRGS+KK
Sbjct: 61  TMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK 105

[Close]

BLAST of CsaV3_1G044540 vs. NCBI nr
Match: XP_022933784.1 (uncharacterized protein LOC111441095 [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 93/105 (88.57%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSG  KGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGQVKGGHAKFECPHCKITAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHPK+PFEE+KV NLH  R AAEASK KPGVRGS KK
Sbjct: 61  TMQIHHESKHPKIPFEEDKVTNLHVDR-AAEASKVKPGVRGSLKK 104

[Close]

BLAST of CsaV3_1G044540 vs. TAIR10
Match: AT3G02790.1 (zinc finger (C2H2 type) family protein)

HSP 1 Score: 167.2 bits (422), Expect = 5.6e-42
Identity = 79/105 (75.24%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAA TNRGGGKAG+ADR+G EKGGHAK+ECP+CKITAP +K
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHP + +EE K++NLHAV      SK KPG+RGS KK
Sbjct: 61  TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK 105

[Close]

BLAST of CsaV3_1G044540 vs. TAIR10
Match: AT5G16470.1 (zinc finger (C2H2 type) family protein)

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-39
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKE+ AK DAA TNRGGGKAGLADR+G EKGGHAK+ECP+CKIT PD+K
Sbjct: 1   MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLH-AVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHPK+ +EE +  NLH A+   AE+SK KPG+RGS KK
Sbjct: 61  TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRGSLKK 104

[Close]

BLAST of CsaV3_1G044540 vs. Swiss-Prot
Match: sp|Q9M8S0|MBS1_ARATH (Protein METHYLENE BLUE SENSITIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MBS1 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-40
Identity = 79/105 (75.24%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEI AKIDAA TNRGGGKAG+ADR+G EKGGHAK+ECP+CKITAP +K
Sbjct: 1   MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHP + +EE K++NLHAV      SK KPG+RGS KK
Sbjct: 61  TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK 105

[Close]

BLAST of CsaV3_1G044540 vs. Swiss-Prot
Match: sp|Q9FFD8|MBS2_ARATH (Protein METHYLENE BLUE SENSITIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MBS2 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.8e-38
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKE+ AK DAA TNRGGGKAGLADR+G EKGGHAK+ECP+CKIT PD+K
Sbjct: 1   MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLH-AVRVAAEASKTKPGVRGSYKK 106
           +MQIHHESKHPK+ +EE +  NLH A+   AE+SK KPG+RGS KK
Sbjct: 61  TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRGSLKK 104

[Close]

BLAST of CsaV3_1G044540 vs. TrEMBL
Match: tr|A0A0A0LXT9|A0A0A0LXT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G657510 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.5e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK
Sbjct: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 105

[Close]

BLAST of CsaV3_1G044540 vs. TrEMBL
Match: tr|A0A1S3B9F4|A0A1S3B9F4_CUCME (uncharacterized protein LOC103487230 OS=Cucumis melo OX=3656 GN=LOC103487230 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-49
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECP+CKITAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHESKHPK+PFEE+KV NLHAVRV AEASK KPGVRGSYKK
Sbjct: 61  SMQIHHESKHPKIPFEEDKVTNLHAVRVTAEASKPKPGVRGSYKK 105

[Close]

BLAST of CsaV3_1G044540 vs. TrEMBL
Match: tr|A0A1S3TWL9|A0A1S3TWL9_VIGRR (uncharacterized protein LOC106759468 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759468 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43
Identity = 87/105 (82.86%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSG EKGGHAK+ECP CK+TAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGVEKGGHAKYECPLCKVTAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHE++HPK+PFEE+KV+NLHA  +A+E+SK +PG+RGS+KK
Sbjct: 61  SMQIHHEARHPKIPFEEDKVVNLHAT-IASESSKARPGIRGSHKK 104

[Close]

BLAST of CsaV3_1G044540 vs. TrEMBL
Match: tr|A0A0L9U3Q3|A0A0L9U3Q3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g040000 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-43
Identity = 86/105 (81.90%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG ADRSG EKGGHAK+ECP+CK+TAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGQADRSGVEKGGHAKYECPHCKVTAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHE++HPK+PFEE+KV+NLHA  +A+E+SK +PG+RGS+KK
Sbjct: 61  SMQIHHEARHPKIPFEEDKVVNLHAT-IASESSKQRPGIRGSHKK 104

[Close]

BLAST of CsaV3_1G044540 vs. TrEMBL
Match: tr|A0A0S3RSG7|A0A0S3RSG7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G069000 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-43
Identity = 86/105 (81.90%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60
           MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG ADRSG EKGGHAK+ECP+CK+TAPDVK
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGQADRSGVEKGGHAKYECPHCKVTAPDVK 60

Query: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRGSYKK 106
           SMQIHHE++HPK+PFEE+KV+NLHA  +A+E+SK +PG+RGS+KK
Sbjct: 61  SMQIHHEARHPKIPFEEDKVVNLHAT-IASESSKQRPGIRGSHKK 104

The following BLAST results are available for this feature:

BLAST of CsaV3_1G044540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660225.1	3.8e-52	100.00	PREDICTED: uncharacterized protein LOC101210666 [Cucumis sativus] >KGN66675.1 hy...	[more]
XP_008443699.1	2.3e-49	94.29	PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo]	[more]
XP_022961022.1	1.3e-47	90.48	uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022961023.1 unchar...	[more]
XP_023516233.1	1.6e-47	89.52	uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo] >XP_023516234....	[more]
XP_022933784.1	1.1e-43	88.57	uncharacterized protein LOC111441095 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G044540 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02790.1	5.6e-42	75.24	zinc finger (C2H2 type) family protein	[more]
AT5G16470.1	1.5e-39	74.53	zinc finger (C2H2 type) family protein	[more]

BLAST of CsaV3_1G044540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M8S0\|MBS1_ARATH	1.0e-40	75.24	Protein METHYLENE BLUE SENSITIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MBS1 PE=...	[more]
sp\|Q9FFD8\|MBS2_ARATH	2.8e-38	74.53	Protein METHYLENE BLUE SENSITIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MBS2 PE=...	[more]

BLAST of CsaV3_1G044540 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXT9\|A0A0A0LXT9_CUCSA	2.5e-52	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G657510 PE=4 SV=1	[more]
tr\|A0A1S3B9F4\|A0A1S3B9F4_CUCME	1.5e-49	94.29	uncharacterized protein LOC103487230 OS=Cucumis melo OX=3656 GN=LOC103487230 PE=...	[more]
tr\|A0A1S3TWL9\|A0A1S3TWL9_VIGRR	1.6e-43	82.86	uncharacterized protein LOC106759468 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
tr\|A0A0L9U3Q3\|A0A0L9U3Q3_PHAAN	4.7e-43	81.90	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g040000 PE...	[more]
tr\|A0A0S3RSG7\|A0A0S3RSG7_PHAAN	4.7e-43	81.90	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G044540.1	CsaV3_1G044540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	PANTHER	PTHR21213:SF13	SUBFAMILY NOT NAMED	coord: 1..105
None	No IPR available	PANTHER	PTHR21213	FAMILY NOT NAMED	coord: 1..105
None	No IPR available	SUPERFAMILY	SSF118359	Expressed protein At2g23090/F21P24.15	coord: 29..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G044540	CSPI01G32360	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G044540	Cucsa.356740	Cucumber (Gy14) v1	cgycucB542
CsaV3_1G044540	CmaCh10G008310	Cucurbita maxima (Rimu)	cmacucB0066
CsaV3_1G044540	CmoCh10G008610	Cucurbita moschata (Rifu)	cmocucB0053
CsaV3_1G044540	CmoCh11G009620	Cucurbita moschata (Rifu)	cmocucB0090
CsaV3_1G044540	Cp4.1LG00g01550	Cucurbita pepo (Zucchini)	cpecucB0000
CsaV3_1G044540	Carg22728	Silver-seed gourd	carcucB0573
CsaV3_1G044540	Carg17794	Silver-seed gourd	carcucB1010
CsaV3_1G044540	Cla009558	Watermelon (97103) v1	cucwmB016
CsaV3_1G044540	MELO3C010059	Melon (DHL92) v3.5.1	cucmeB044
CsaV3_1G044540	ClCG03G010710	Watermelon (Charleston Gray)	cucwcgB041
CsaV3_1G044540	Lsi06G007010	Bottle gourd (USVL1VR-Ls)	cuclsiB068
CsaV3_1G044540	MELO3C010059.2	Melon (DHL92) v3.6.1	cucmedB041
CsaV3_1G044540	Cla97C03G061340	Watermelon (97103) v2	cucwmbB033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G044540	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G044540	Cucurbita maxima (Rimu)	cmacucB0099
CsaV3_1G044540	Cucurbita pepo (Zucchini)	cpecucB0428
CsaV3_1G044540	Bottle gourd (USVL1VR-Ls)	cuclsiB090
CsaV3_1G044540	Wax gourd	cucwgoB098