Carg17794 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCCAGGCGAAGATCGACGCAGCTACCACCAACAGAGGTGGCGGAAAGGCCGGGCTTGCAGACCGGTCCGGCCAAGAAAAAGGTGGTCACGCGAAGTTCGAGTGCCCACACTGTAAGATTACAGCGCCTGATGTTAAAACTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAGGAAGACAAGGTTGTGAATCTCCATGCTGTTCGTGTTGCTGCTGAGGCGTCTAAGCCCAAACCGGGTGTGAGAGGCAGCTTCAAGAAGTGA ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCCAGGCGAAGATCGACGCAGCTACCACCAACAGAGGTGGCGGAAAGGCCGGGCTTGCAGACCGGTCCGGCCAAGAAAAAGGTGGTCACGCGAAGTTCGAGTGCCCACACTGTAAGATTACAGCGCCTGATGTTAAAACTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAGGAAGACAAGGTTGTGAATCTCCATGCTGTTCGTGTTGCTGCTGAGGCGTCTAAGCCCAAACCGGGTGTGAGAGGCAGCTTCAAGAAGTGA ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCCAGGCGAAGATCGACGCAGCTACCACCAACAGAGGTGGCGGAAAGGCCGGGCTTGCAGACCGGTCCGGCCAAGAAAAAGGTGGTCACGCGAAGTTCGAGTGCCCACACTGTAAGATTACAGCGCCTGATGTTAAAACTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAGGAAGACAAGGTTGTGAATCTCCATGCTGTTCGTGTTGCTGCTGAGGCGTCTAAGCCCAAACCGGGTGTGAGAGGCAGCTTCAAGAAGTGA MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVKTMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK
BLAST of Carg17794 vs. NCBI nr
Match: XP_022961022.1 (uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022961023.1 uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022988627.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988628.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988629.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988631.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988632.1 uncharacterized protein LOC111485822 [Cucurbita maxima]) HSP 1 Score: 213.8 bits (543), Expect = 2.9e-52 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg17794 vs. NCBI nr
Match: XP_023516233.1 (uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo] >XP_023516234.1 uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.4 bits (542), Expect = 3.7e-52 Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg17794 vs. NCBI nr
Match: XP_008443699.1 (PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 8.6e-49 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Carg17794 vs. NCBI nr
Match: XP_011660225.1 (PREDICTED: uncharacterized protein LOC101210666 [Cucumis sativus] >KGN66675.1 hypothetical protein Csa_1G657510 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47 Identity = 95/105 (90.48%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Carg17794 vs. NCBI nr
Match: XP_022933784.1 (uncharacterized protein LOC111441095 [Cucurbita moschata]) HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45 Identity = 96/105 (91.43%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of Carg17794 vs. TAIR10
Match: AT3G02790.1 (zinc finger (C2H2 type) family protein) HSP 1 Score: 179.1 bits (453), Expect = 1.4e-45 Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Carg17794 vs. TAIR10
Match: AT5G16470.1 (zinc finger (C2H2 type) family protein) HSP 1 Score: 171.0 bits (432), Expect = 3.9e-43 Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of Carg17794 vs. Swiss-Prot
Match: sp|Q9M8S0|MBS1_ARATH (Protein METHYLENE BLUE SENSITIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MBS1 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.6e-44 Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Carg17794 vs. Swiss-Prot
Match: sp|Q9FFD8|MBS2_ARATH (Protein METHYLENE BLUE SENSITIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MBS2 PE=1 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 7.0e-42 Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of Carg17794 vs. TrEMBL
Match: tr|A0A1S3B9F4|A0A1S3B9F4_CUCME (uncharacterized protein LOC103487230 OS=Cucumis melo OX=3656 GN=LOC103487230 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 5.7e-49 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Carg17794 vs. TrEMBL
Match: tr|A0A0A0LXT9|A0A0A0LXT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G657510 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.4e-47 Identity = 95/105 (90.48%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Carg17794 vs. TrEMBL
Match: tr|A0A2U1L3F9|A0A2U1L3F9_ARTAN (Zinc finger (C2H2 type) family protein OS=Artemisia annua OX=35608 GN=CTI12_AA536380 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.5e-44 Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Carg17794 vs. TrEMBL
Match: tr|A0A251TAY0|A0A251TAY0_HELAN (Putative zinc finger (C2H2 type) family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0333601 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.5e-44 Identity = 87/105 (82.86%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Carg17794 vs. TrEMBL
Match: tr|A0A078GVL9|A0A078GVL9_BRANA (BnaCnng05940D protein OS=Brassica napus OX=3708 GN=BnaCnng05940D PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.2e-44 Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|