Lsi05G006060 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGAAAACAAGATGTACTTAAATCAGTCGCAAAAACGAGCTATTGTTGACCCATCATTTGTGAAACGACATGTGACCAAGACACCAGAATCGTCAAAAAATTCGACAAAGAAGTCGTGGTGGAAGAAACCAGAATTGAAGAGACGACGACGTGTTGCAAAGTACAAATTGTATGCAGTTGAAGGGAAGGTTAAGAATTCCATAAAGAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGAAAACAAGATGTACTTAAATCAGTCGCAAAAACGAGCTATTGTTGACCCATCATTTGTGAAACGACATGTGACCAAGACACCAGAATCGTCAAAAAATTCGACAAAGAAGTCGTGGTGGAAGAAACCAGAATTGAAGAGACGACGACGTGTTGCAAAGTACAAATTGTATGCAGTTGAAGGGAAGGTTAAGAATTCCATAAAGAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGAAAACAAGATGTACTTAAATCAGTCGCAAAAACGAGCTATTGTTGACCCATCATTTGTGAAACGACATGTGACCAAGACACCAGAATCGTCAAAAAATTCGACAAAGAAGTCGTGGTGGAAGAAACCAGAATTGAAGAGACGACGACGTGTTGCAAAGTACAAATTGTATGCAGTTGAAGGGAAGGTTAAGAATTCCATAAAGAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTKKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF
BLAST of Lsi05G006060 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 3.1e-44 Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 1
BLAST of Lsi05G006060 vs. TrEMBL
Match: A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.2e-29 Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 1
BLAST of Lsi05G006060 vs. TrEMBL
Match: A0A061F3Z2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.3e-14 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 1
BLAST of Lsi05G006060 vs. TrEMBL
Match: M5W2H8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.7e-14 Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 1
BLAST of Lsi05G006060 vs. TrEMBL
Match: A0A151TW82_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_010537 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 9.7e-14 Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 1
BLAST of Lsi05G006060 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511)) HSP 1 Score: 68.2 bits (165), Expect = 3.7e-12 Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 1
BLAST of Lsi05G006060 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 57.0 bits (136), Expect = 8.4e-09 Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 1
BLAST of Lsi05G006060 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511)) HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07 Identity = 22/59 (37.29%), Postives = 41/59 (69.49%), Query Frame = 1
BLAST of Lsi05G006060 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511)) HSP 1 Score: 51.6 bits (122), Expect = 3.5e-07 Identity = 39/114 (34.21%), Postives = 53/114 (46.49%), Query Frame = 1
BLAST of Lsi05G006060 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511)) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-07 Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 1
BLAST of Lsi05G006060 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus]) HSP 1 Score: 185.7 bits (470), Expect = 4.5e-44 Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 1
BLAST of Lsi05G006060 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 9.9e-44 Identity = 93/109 (85.32%), Postives = 100/109 (91.74%), Query Frame = 1
BLAST of Lsi05G006060 vs. NCBI nr
Match: gi|659082109|ref|XP_008441676.1| (PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 3.9e-32 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 1
BLAST of Lsi05G006060 vs. NCBI nr
Match: gi|700206328|gb|KGN61447.1| (hypothetical protein Csa_2G123580 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 3.1e-29 Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 1
BLAST of Lsi05G006060 vs. NCBI nr
Match: gi|590644563|ref|XP_007031116.1| (Uncharacterized protein TCM_026743 [Theobroma cacao]) HSP 1 Score: 85.9 bits (211), Expect = 4.8e-14 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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