Cucsa.059870 (gene) Cucumber (Gy14) v1

NameCucsa.059870
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDUF3511 domain protein
Locationscaffold00621 : 453321 .. 453650 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATGTCTGGGTTTTGA

mRNA sequence

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATGTCTGGGTTTTGA

Coding sequence (CDS)

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATGTCTGGGTTTTGA

Protein sequence

MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF*
BLAST of Cucsa.059870 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRI+SGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of Cucsa.059870 vs. TrEMBL
Match: A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-28
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           MEG+H  PNKG R+L +IDVRKLS NK++LNQS R++ ++PS VK    KT SE SK+  
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
            K W KK E++RR+RVAKYKLY VEGKVK SI+KGI W K K +RIMSGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of Cucsa.059870 vs. TrEMBL
Match: A0A061F3Z2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-15
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1

Query: 11  GGRSLEVIDVRKLS-VNKVYLNQSQRRTVVDPSFV--KQYVTKTSEPSKSCMKKPWWKKP 70
           GGR+ E+ D   L  VNKVY  +S +   +DPS    KQ   K  +       K WW +P
Sbjct: 18  GGRNPEISDSNMLKYVNKVYFGRSSQPPALDPSPFDRKQNAKKKRKEESRTTSKSWWNEP 77

Query: 71  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           +M+R++R+AKYK++ +EGK+K S+KKG RWIK K  +I+ G+
Sbjct: 78  KMKRKRRLAKYKMFALEGKLKESLKKGSRWIKKKYCKIVHGY 119

BLAST of Cucsa.059870 vs. TrEMBL
Match: M5W2H8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-13
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 1

Query: 11  GGRSLEVIDVRKLSVNK-VYLNQSQRRTVVDPSFVKQYVTKTSE-----------PSKSC 70
           G R+L++++VR+LS N+ +Y+ +S     +DPS+   Y  KT +           P +  
Sbjct: 13  GCRNLDMVNVRRLSENRTMYMGRSH----LDPSWAP-YPMKTRQRDIQLRIGGKKPKERS 72

Query: 71  MK--KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIM 107
            K  K WW  PE +RR RVA+YKLYG EGKVKRS+KKG RW K KC  I+
Sbjct: 73  SKPSKLWWNDPEFKRRGRVARYKLYGAEGKVKRSLKKGYRWFKRKCLEIV 117

BLAST of Cucsa.059870 vs. TrEMBL
Match: M4FHE8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-13
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 1

Query: 10  KGGRSLEVIDVRKLS-VNKVYLNQSQRRT----VVDP----SFVKQYVTKTSEPSKSCMK 69
           +GGR+L+++D   L  V  +Y+ +  +R       DP    S+    V     PS S   
Sbjct: 16  EGGRNLQLVDPADLKPVRGIYVVRESKRNRSPMTSDPWRKISYKDMPVKSRRPPSHSKTL 75

Query: 70  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSG 109
           K WW  PE++R++RVAKYKLY  EGKVK+S+KK  +WIK +C++I+ G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKVKKSLKKSYKWIKIQCAKIIHG 123

BLAST of Cucsa.059870 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511))

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-13
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 1

Query: 10  KGGRSLEVIDVRKLS-VNKVYLNQSQRRTVVD--------PSFVKQYVTKTSEPSKSCMK 69
           +G R+L++++   L  V  +Y+ +  RR             S+    V      S S + 
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 70  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSG 109
           K WW  PE++R++RVAKYKLY  EGK+K +++K  +WIK +CS+I+ G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of Cucsa.059870 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511))

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-09
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 1

Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           EM+R++R+A+YK Y VEGKVK ++K G RWIK KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of Cucsa.059870 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511))

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 1

Query: 56  KSCMKKPWW--KKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           KS  +   W    PE++R++RVA YK+YGVEGKVK S +   RW+K + ++++ G+
Sbjct: 49  KSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

BLAST of Cucsa.059870 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511))

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 1

Query: 40  DPSFVKQYVTKTSEPSKSCMKKPWWK--KPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRW 99
           +P+ V+      S+ S    KK +    + E++R++RVA Y +YGVEG+VK S+KK  +W
Sbjct: 55  NPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKW 114

Query: 100 IKTKCSRIMSG 109
            K  CS  + G
Sbjct: 115 FKETCSNAVYG 125

BLAST of Cucsa.059870 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511))

HSP 1 Score: 51.2 bits (121), Expect = 4.7e-07
Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 1

Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSG 109
           E +R++R+A YK Y +EGKVK ++KKG  WIK + S I+ G
Sbjct: 70  ETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of Cucsa.059870 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 2.3e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRI+SGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of Cucsa.059870 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHH NKGGRSLEV+DVRKLS NK+YLNQSQRRTVVDPSFVK+YVTKT EPSK  MK
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           K WWKKPEM+RRQRVAKYKLY VEGKVK SIKKG RWIKTKCSRI+SGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of Cucsa.059870 vs. NCBI nr
Match: gi|659082109|ref|XP_008441676.1| (PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo])

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    KT SE SK+  
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RI+SGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of Cucsa.059870 vs. NCBI nr
Match: gi|700206328|gb|KGN61447.1| (hypothetical protein Csa_2G123580 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           MEG+H  PNKG R+L +IDVRKLS NK++LNQS R++ ++PS VK    KT SE SK+  
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
            K W KK E++RR+RVAKYKLY VEGKVK SI+KGI W K K +RIMSGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of Cucsa.059870 vs. NCBI nr
Match: gi|590644563|ref|XP_007031116.1| (Uncharacterized protein TCM_026743 [Theobroma cacao])

HSP 1 Score: 88.6 bits (218), Expect = 7.5e-15
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1

Query: 11  GGRSLEVIDVRKLS-VNKVYLNQSQRRTVVDPSFV--KQYVTKTSEPSKSCMKKPWWKKP 70
           GGR+ E+ D   L  VNKVY  +S +   +DPS    KQ   K  +       K WW +P
Sbjct: 18  GGRNPEISDSNMLKYVNKVYFGRSSQPPALDPSPFDRKQNAKKKRKEESRTTSKSWWNEP 77

Query: 71  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           +M+R++R+AKYK++ +EGK+K S+KKG RWIK K  +I+ G+
Sbjct: 78  KMKRKRRLAKYKMFALEGKLKESLKKGSRWIKKKYCKIVHGY 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7N5_CUCSA1.6e-5699.08Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1[more]
A0A0A0LL30_CUCSA2.4e-2862.73Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1[more]
A0A061F3Z2_THECC5.2e-1543.14Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1[more]
M5W2H8_PRUPE1.3e-1344.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1[more]
M4FHE8_BRARP1.7e-1340.74Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05725.14.4e-1335.19 Protein of unknown function (DUF3511)[more]
AT2G47480.13.8e-0957.14 Protein of unknown function (DUF3511)[more]
AT5G11970.14.2e-0842.86 Protein of unknown function (DUF3511)[more]
AT1G72720.11.2e-0738.03 Protein of unknown function (DUF3511)[more]
AT3G62640.14.7e-0751.22 Protein of unknown function (DUF3511)[more]
Match NameE-valueIdentityDescription
gi|700201003|gb|KGN56136.1|2.3e-5699.08hypothetical protein Csa_3G077700 [Cucumis sativus][more]
gi|659126920|ref|XP_008463430.1|1.3e-4687.16PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo][more]
gi|659082109|ref|XP_008441676.1|3.7e-3060.91PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo][more]
gi|700206328|gb|KGN61447.1|3.5e-2862.73hypothetical protein Csa_2G123580 [Cucumis sativus][more]
gi|590644563|ref|XP_007031116.1|7.5e-1543.14Uncharacterized protein TCM_026743 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021899DUF3511
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.059870.1Cucsa.059870.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 64..108
score: 1.4
NoneNo IPR availablePANTHERPTHR33193FAMILY NOT NAMEDcoord: 31..109
score: 3.4
NoneNo IPR availablePANTHERPTHR33193:SF1SUBFAMILY NOT NAMEDcoord: 31..109
score: 3.4