CSPI03G05200 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAACCCAAAACTTGTTTTCCACCCCTTTCTCCTCTCTTCCTCTCAATCCCATTCACTCTCAACTTTAAAAACTAAACATAGAAACTACGATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGAAAATATTATTCTTTCTAAATCTTATATTGTAAAATAAAAAAGCATTATTTATAAGAAAAAACCATACTTCAATTTCATGGTTTTTTTCTTCTTCTTTTTCACGTTATTTCTGTGGAGACGCTCTTAAACATAACGTTAACGTTAAGATGATTGATTATCA ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA
BLAST of CSPI03G05200 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 1.8e-55 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1
BLAST of CSPI03G05200 vs. TrEMBL
Match: A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.7e-26 Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of CSPI03G05200 vs. TrEMBL
Match: A0A061F3Z2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of CSPI03G05200 vs. TrEMBL
Match: M5W2H8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.4e-12 Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 1
BLAST of CSPI03G05200 vs. TrEMBL
Match: M4FHE8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.9e-12 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 1
BLAST of CSPI03G05200 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511)) HSP 1 Score: 67.8 bits (164), Expect = 4.8e-12 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 1
BLAST of CSPI03G05200 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 57.4 bits (137), Expect = 6.5e-09 Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 1
BLAST of CSPI03G05200 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511)) HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07 Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 1
BLAST of CSPI03G05200 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511)) HSP 1 Score: 50.8 bits (120), Expect = 6.1e-07 Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1
BLAST of CSPI03G05200 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511)) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06 Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 1
BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 2.5e-55 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1
BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo]) HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45 Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 1
BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|659082109|ref|XP_008441676.1| (PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo]) HSP 1 Score: 136.0 bits (341), Expect = 4.1e-29 Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1
BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|700206328|gb|KGN61447.1| (hypothetical protein Csa_2G123580 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26 Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|590644563|ref|XP_007031116.1| (Uncharacterized protein TCM_026743 [Theobroma cacao]) HSP 1 Score: 85.1 bits (209), Expect = 8.3e-14 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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