CSPI03G05200 (gene) Wild cucumber (PI 183967)

NameCSPI03G05200
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDUF3511 domain protein
LocationChr3 : 4226052 .. 4226633 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAACCCAAAACTTGTTTTCCACCCCTTTCTCCTCTCTTCCTCTCAATCCCATTCACTCTCAACTTTAAAAACTAAACATAGAAACTACGATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGAAAATATTATTCTTTCTAAATCTTATATTGTAAAATAAAAAAGCATTATTTATAAGAAAAAACCATACTTCAATTTCATGGTTTTTTTCTTCTTCTTTTTCACGTTATTTCTGTGGAGACGCTCTTAAACATAACGTTAACGTTAAGATGATTGATTATCA

mRNA sequence

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

Coding sequence (CDS)

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA
BLAST of CSPI03G05200 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of CSPI03G05200 vs. TrEMBL
Match: A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-26
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           MEG+H  PNKG R+L +IDVRKLS NK++LNQS R++ ++PS VK    KT SE SK+  
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
            K W KK E++RR+RVAKYKLY VEGKVK SI+KGI W K K +RI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of CSPI03G05200 vs. TrEMBL
Match: A0A061F3Z2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1

Query: 11  GGRSLEVIDVRKLS-VNKVYLNQSQRRTVVDPSFV--KQYVTKTSEPSKSCMKKPWWKKP 70
           GGR+ E+ D   L  VNKVY  +S +   +DPS    KQ   K  +       K WW +P
Sbjct: 18  GGRNPEISDSNMLKYVNKVYFGRSSQPPALDPSPFDRKQNAKKKRKEESRTTSKSWWNEP 77

Query: 71  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           +M+R++R+AKYK++ +EGK+K S+KKG RWIK K  +I+ G+
Sbjct: 78  KMKRKRRLAKYKMFALEGKLKESLKKGSRWIKKKYCKIVHGY 119

BLAST of CSPI03G05200 vs. TrEMBL
Match: M5W2H8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-12
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 1

Query: 11  GGRSLEVIDVRKLSVNK-VYLNQSQRRTVVDPSFVKQYVTKTSE-----------PSKSC 70
           G R+L++++VR+LS N+ +Y+ +S     +DPS+   Y  KT +           P +  
Sbjct: 13  GCRNLDMVNVRRLSENRTMYMGRSH----LDPSWAP-YPMKTRQRDIQLRIGGKKPKERS 72

Query: 71  MK--KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRII 107
            K  K WW  PE +RR RVA+YKLYG EGKVKRS+KKG RW K KC  I+
Sbjct: 73  SKPSKLWWNDPEFKRRGRVARYKLYGAEGKVKRSLKKGYRWFKRKCLEIV 117

BLAST of CSPI03G05200 vs. TrEMBL
Match: M4FHE8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-12
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 1

Query: 10  KGGRSLEVIDVRKLS-VNKVYLNQSQRRT----VVDP----SFVKQYVTKTSEPSKSCMK 69
           +GGR+L+++D   L  V  +Y+ +  +R       DP    S+    V     PS S   
Sbjct: 16  EGGRNLQLVDPADLKPVRGIYVVRESKRNRSPMTSDPWRKISYKDMPVKSRRPPSHSKTL 75

Query: 70  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISG 109
           K WW  PE++R++RVAKYKLY  EGKVK+S+KK  +WIK +C++II G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKVKKSLKKSYKWIKIQCAKIIHG 123

BLAST of CSPI03G05200 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511))

HSP 1 Score: 67.8 bits (164), Expect = 4.8e-12
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 1

Query: 10  KGGRSLEVIDVRKLS-VNKVYLNQSQRRTVVD--------PSFVKQYVTKTSEPSKSCMK 69
           +G R+L++++   L  V  +Y+ +  RR             S+    V      S S + 
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 70  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISG 109
           K WW  PE++R++RVAKYKLY  EGK+K +++K  +WIK +CS+II G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of CSPI03G05200 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511))

HSP 1 Score: 57.4 bits (137), Expect = 6.5e-09
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 1

Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           EM+R++R+A+YK Y VEGKVK ++K G RWIK KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of CSPI03G05200 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511))

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 1

Query: 56  KSCMKKPWW--KKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           KS  +   W    PE++R++RVA YK+YGVEGKVK S +   RW+K + ++++ G+
Sbjct: 49  KSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

BLAST of CSPI03G05200 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511))

HSP 1 Score: 50.8 bits (120), Expect = 6.1e-07
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1

Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISG 109
           E +R++R+A YK Y +EGKVK ++KKG  WIK + S II G
Sbjct: 70  ETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of CSPI03G05200 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511))

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 1

Query: 40  DPSFVKQYVTKTSEPSKSCMKKPWWK--KPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRW 99
           +P+ V+      S+ S    KK +    + E++R++RVA Y +YGVEG+VK S+KK  +W
Sbjct: 55  NPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKW 114

Query: 100 IKTKCSRIISG 109
            K  CS  + G
Sbjct: 115 FKETCSNAVYG 125

BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHH NKGGRSLEV+DVRKLS NK+YLNQSQRRTVVDPSFVK+YVTKT EPSK  MK
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           K WWKKPEM+RRQRVAKYKLY VEGKVK SIKKG RWIKTKCSRIISGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|659082109|ref|XP_008441676.1| (PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 4.1e-29
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    KT SE SK+  
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|700206328|gb|KGN61447.1| (hypothetical protein Csa_2G123580 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 1

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           MEG+H  PNKG R+L +IDVRKLS NK++LNQS R++ ++PS VK    KT SE SK+  
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
            K W KK E++RR+RVAKYKLY VEGKVK SI+KGI W K K +RI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of CSPI03G05200 vs. NCBI nr
Match: gi|590644563|ref|XP_007031116.1| (Uncharacterized protein TCM_026743 [Theobroma cacao])

HSP 1 Score: 85.1 bits (209), Expect = 8.3e-14
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1

Query: 11  GGRSLEVIDVRKLS-VNKVYLNQSQRRTVVDPSFV--KQYVTKTSEPSKSCMKKPWWKKP 70
           GGR+ E+ D   L  VNKVY  +S +   +DPS    KQ   K  +       K WW +P
Sbjct: 18  GGRNPEISDSNMLKYVNKVYFGRSSQPPALDPSPFDRKQNAKKKRKEESRTTSKSWWNEP 77

Query: 71  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 110
           +M+R++R+AKYK++ +EGK+K S+KKG RWIK K  +I+ G+
Sbjct: 78  KMKRKRRLAKYKMFALEGKLKESLKKGSRWIKKKYCKIVHGY 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7N5_CUCSA1.8e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1[more]
A0A0A0LL30_CUCSA1.7e-2661.82Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1[more]
A0A061F3Z2_THECC5.8e-1443.14Uncharacterized protein OS=Theobroma cacao GN=TCM_026743 PE=4 SV=1[more]
M5W2H8_PRUPE1.4e-1244.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1[more]
M4FHE8_BRARP1.9e-1241.67Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05725.14.8e-1236.11 Protein of unknown function (DUF3511)[more]
AT2G47480.16.5e-0957.14 Protein of unknown function (DUF3511)[more]
AT5G11970.13.6e-0742.86 Protein of unknown function (DUF3511)[more]
AT3G62640.16.1e-0753.66 Protein of unknown function (DUF3511)[more]
AT1G72720.11.8e-0638.03 Protein of unknown function (DUF3511)[more]
Match NameE-valueIdentityDescription
gi|700201003|gb|KGN56136.1|2.5e-55100.00hypothetical protein Csa_3G077700 [Cucumis sativus][more]
gi|659126920|ref|XP_008463430.1|1.4e-4588.07PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo][more]
gi|659082109|ref|XP_008441676.1|4.1e-2961.82PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo][more]
gi|700206328|gb|KGN61447.1|2.5e-2661.82hypothetical protein Csa_2G123580 [Cucumis sativus][more]
gi|590644563|ref|XP_007031116.1|8.3e-1443.14Uncharacterized protein TCM_026743 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021899DUF3511
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G05200.1CSPI03G05200.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 64..108
score: 9.6
NoneNo IPR availablePANTHERPTHR33193FAMILY NOT NAMEDcoord: 31..109
score: 6.1
NoneNo IPR availablePANTHERPTHR33193:SF1SUBFAMILY NOT NAMEDcoord: 31..109
score: 6.1

The following gene(s) are paralogous to this gene:

None