Lsi05G001160 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001160
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Thylakoid lumenal 17.4 kDa protein
Location	chr05 : 1874022 .. 1877038 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCATCTTCGAACGGATAAGTCAGGCAAGAGTGAGGGAGCCGGAGAGAATTCATTTTTTTTTTCTTTCAAATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTTTTTCTTCTATCTCTTCAACTCTACTTCTATGGATTGATTTTCTCCAATAATTGCTAAACTGAGTACCCTTTTGTGGGTAAATTGCGTTAGAATCTGGGGAGAACTGTTTTCTTTTTACTCAATTCCTGCCCTTTGATGCCTATTATATCTTGTTAGGCTTAGGATCAAGATGCTGGTTCGCCAAATTGGCTAATTCTTTGAATGAGTTCAAAATTTGTAAAAAAAAATTCATGTTTTTGCATACCCTGAAATGTGCTTAGTCGAATTCAATTAGGGGTATTTGGTGGGCTGAGTTCCAATTTTAAAGTCTGAGTTAGTAAGTTTGTGTTTGGGGTGCAGAGTTGTTTAATTTGGAGTTGGGAAACATTAGAGGGTGGGAAAGAGAAAGAGGGGAAGATAAAGTTTTTCGATAAATGTGTAAACTACAATAGTGAATGTGGTTGAAGTTGGTGGAGTTGAGTTATAAAGTCGGTGAGCCAAACACTCCCTTATAAATCTTCACCACGTAGAGGGAAACGAATATCATGTGTAGTGGACGTTAACTGAACCTGCATCTAAGCATTATGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTGTGCTCACTTACAGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGGTTAATAGCATTTTCTGTTGATTTATAGTTTATACATCTAAGTTTGGTAGAGTAGTAGTTTGTACCATAGAGAAATTATCAACTATTTGAAATATATTGATATAATTAAATTTACTGTAGTAATCCATCAACTTAAGTCCATGACAATTTACTGTAATATATTGACTAAATTCAAGTTTTGTATCATTTTCTTTTGATTTGTAGTTTGTAGTGATTTAACAATTGGCATAACATTTTAGAATAATGAAATGCTATTCAAATTTATCACGATGTTTGTGTACATGAGCCAAAAGTTTGCAAGCACCATTTCGAACTCACAATTTTTGCATTTAAATTTAGGCTTAAGATGTAAGACCTAGTTATCATTTTGGCGGATTGAGTGTGTTGGTTTGGAAGCCCTACTTTTCCATCTCCCTCCCCATCATTCTGAATCCACATCCCTTTCTGTCTGTCCTACAATACCGTGATTATAATGCTCTTTCTGATAGGATAACTTGTAAAATTTTCCCGATTCTAACTAAAATTCAGTTATTTACTTCACCAGTTGACATACAGTCATTGTCCTTCGGATACTCTATTTTCTTCTATTCTTGTTATGTTTTTCCTTTTATAGTCATGATTGACAAATGTTATTCACTTTCTGTGTCAAGTGTCAAACAACTCATAACATCTTACTTTGAAAAAGAAATCTGTTGATCTCATAATACCTGGGACTTGCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGAAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGGGTAGTTAACAAATCTTTCATATTCTAACACGAATTCCTCATTAAGCAACGGAGGACTTTCATTTTATACAATGACATAGTACATGTTTGGGAGTGATTCTATCATGTTTAAAAATATTTTGAAACACACTTTTAATCACTCAAAATCAATTCAATATTTAATTTTACAGTTTTAAATATGGTTTAGGGTTTTTTCATGCTATTACAGTTGATTTTGCATGATTTAAAAGCTTTTTTTCGAGTGATTTTAACCATTTTGAAATCACTCCAAACATGCCATAAGTTTTTAAACTCTGCTTTCAATACTTGATCTGGTACATAGACAAAATCCACGTGTTCAACACATGCTAGTTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAATGCAGATGGTCCCATTTTAATTGTTAACTGAATGGAACATAAAATGATGTTTCATACTATTCTCTCTTCATGTGCTTCAAGTAAATGAATGGGAAGCCAAAAATGCATTCAAGTAGAATATTAAAAGTGTCATTATCTGTCTGTGAATGCCATAATTGATCCTTGCCATGGGTTTGCTAAAAATTATTTAAGTACTGTTTTTTTTTTTATTTTTTATTTTAAGGACTCCGAGATTCCTGAAGAAAAACTCAGAATATGGCTTCAAATATCATGACAAAGTTTCATATTGCAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAATTTCAATATAGTTTCAATACTTTCACTATATGTATTGTATAATCAACTTGATTATTTTTGTAGGTAATAAATATTCAAAAGAGAGAACTCCCTCTTAACTCCTGTTGAACCACCATGTGCTGCTTTCTATTTTCCATAAGGTTCTTTTGTTATTTCATTTAAG

mRNA sequence

AGCATCTTCGAACGGATAAGTCAGGCAAGAGTGAGGGAGCCGGAGAGAATTCATTTTTTTTTTCTTTCAAATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGAAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAATTTCAATATAGTTTCAATACTTTCACTATATGTATTGTATAATCAACTTGATTATTTTTGTAGGTAATAAATATTCAAAAGAGAGAACTCCCTCTTAACTCCTGTTGAACCACCATGTGCTGCTTTCTATTTTCCATAAGGTTCTTTTGTTATTTCATTTAAG

Coding sequence (CDS)

ATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGAAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAA

Protein sequence

MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of Lsi05G001160 vs. Swiss-Prot
Match: TL17_ARATH (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=TL17 PE=1 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-79
Identity = 155/253 (61.26%), Postives = 189/253 (74.70%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHI 60
           MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  STVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
            ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGG 180
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             G
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK-------------G 180

Query: 181 VDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNP 240
           V+F+NAV+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N 
Sbjct: 181 VNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNE 236

Query: 241 TISPEGRAELGCR 251
           +I+ EGR  LGCR
Sbjct: 241 SINEEGRLVLGCR 236

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BLAST of Lsi05G001160 vs. Swiss-Prot
Match: TL203_ARATH (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.2e-09
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 1


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E    G   G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHSNEN--FRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANL 195
            M E+ F G+  +   + KA A  A+F G              D S+ ++DR+   +ANL
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSG-------------ADLSDTLMDRMVLNEANL 198

Query: 196 QGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 250
             AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 TNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

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BLAST of Lsi05G001160 vs. Swiss-Prot
Match: RFR32_CYAA5 (Pentapeptide repeat protein Rfr32 OS=Cyanothece sp. (strain ATCC 51142) GN=rfr32 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-08
Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 1


Query: 123 EKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSN 182
           E  +L G+  +   ++ A+F  ADL++   S+A   GA F G   S L    + G D +N
Sbjct: 50  EDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNG---SALIGADLHGADLTN 109

Query: 183 AVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNP 242
            +    +F  A+L  AV    ++  + FDDA++  A F   ++   ++ KLC     VNP
Sbjct: 110 GLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNP 169

Query: 243 TISPEGRAELGCR 251
                 R  LGC+
Sbjct: 170 KTGVSTRESLGCQ 179

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BLAST of Lsi05G001160 vs. TrEMBL
Match: A0A0A0LC74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.0e-122
Identity = 223/250 (89.20%), Postives = 230/250 (92.00%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA LS PLS NGFSR FFS +R +I+YPFPHSLPRITCSATRDGAEPRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

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BLAST of Lsi05G001160 vs. TrEMBL
Match: W9QE42_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020914 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95
Identity = 182/252 (72.22%), Postives = 209/252 (82.94%), Query Frame = 1


Query: 2   ATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCS-ATRDGAEPREN--LSPCKHIS 61
           AT SIPL+QN F  RF  +KR  ++    +S PR+ CS  +RDG E +EN  +SP K + 
Sbjct: 3   ATSSIPLNQNVFRLRFKPSKRHALLPVESYSSPRVFCSEVSRDGPELKENNNMSPTKQLK 62

Query: 62  TVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 121
            VACG+LAVW +T  SPV+AA+QRLPPLSTEPNRCERAFVGNTIGQANGVYDKP+DLRFC
Sbjct: 63  NVACGVLAVWAVTTASPVVAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFC 122

Query: 122 DYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGV 181
           DY+NEK+ LKGKSLAAALMS+AKFDGAD++EVVMSKAYAVGASFK             GV
Sbjct: 123 DYSNEKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFK-------------GV 182

Query: 182 DFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPT 241
           DFSNAV+DRVNFGKA+LQGA+FKNTVLSGSTFDDA+L+DAVFEDTIIGY+DLQKLC N T
Sbjct: 183 DFSNAVIDRVNFGKADLQGALFKNTVLSGSTFDDAKLEDAVFEDTIIGYVDLQKLCTNKT 241

Query: 242 ISPEGRAELGCR 251
           ISP+GRAELGCR
Sbjct: 243 ISPDGRAELGCR 241

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BLAST of Lsi05G001160 vs. TrEMBL
Match: V4TLV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021983mg PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 6.8e-95
Identity = 182/251 (72.51%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYP-FPHSLPRITCSATRDGAEPRENLSPCKHIST 60
           MAT+S+PLS N  S +  S  R +  +P   HS   + CSA R+ +EP+E+ S  K +  
Sbjct: 1   MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSARRNSSEPKESFSHLKELKG 60

Query: 61  VACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCD 120
           VACG LA W +T  SPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVD 180
           YTNEK+ LKGKSLAAALMS+AKFDGAD+SEVVMSKAYAVGASFK             GVD
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFK-------------GVD 180

Query: 181 FSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI 240
           FSNAVLDRVNFGKA+L+GAVFKNTVLSGSTF++AQLQDAVFEDTIIGYIDLQKLC N T+
Sbjct: 181 FSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTL 238

Query: 241 SPEGRAELGCR 251
           SP+GRAELGCR
Sbjct: 241 SPDGRAELGCR 238

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BLAST of Lsi05G001160 vs. TrEMBL
Match: B9I1Y5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02510g PE=4 SV=2)

HSP 1 Score: 345.1 bits (884), Expect = 7.0e-92
Identity = 177/250 (70.80%), Postives = 203/250 (81.20%), Query Frame = 1


Query: 2   ATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCK-HISTV 61
           AT S+PLSQN F    FS+ R +   P  HS  +I CS + DG++ RE+L   K  I+ V
Sbjct: 4   ATFSLPLSQNKFPLYHFSSARRRFPIPDLHSPLKICCSGSGDGSKSRESLFQFKKEINYV 63

Query: 62  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 121
           ACG+LA W +T  SPVIAA QRLPPLSTEPNRCE+AFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 64  ACGILAAWAVTAASPVIAAGQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDY 123

Query: 122 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 181
           TN+K+ LKGKSLAAALMS+AKFDGAD++EVVMSKAYAVGASF+             GVDF
Sbjct: 124 TNDKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFR-------------GVDF 183

Query: 182 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 241
           SNAVLDRVNFGKA+L+GAVFKNTVLSGSTFD+AQL+DA+FEDTIIGYIDLQK+C N +I 
Sbjct: 184 SNAVLDRVNFGKADLKGAVFKNTVLSGSTFDEAQLEDAIFEDTIIGYIDLQKICRNTSIG 240

Query: 242 PEGRAELGCR 251
           P+GRAELGCR
Sbjct: 244 PDGRAELGCR 240

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BLAST of Lsi05G001160 vs. TrEMBL
Match: A0A058ZZS0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00402 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89
Identity = 177/250 (70.80%), Postives = 200/250 (80.00%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MAT   PLSQ   S R     R +       S  R+ CSA+++G E +E+    K +  V
Sbjct: 1   MATSLAPLSQTALSLRRLPPTRRRSPASELRSPIRVACSASKEGWEIKESTCCVKELRNV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACG+LAVW +T  SPVIAA+QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGVLAVWAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEK+ LKGKSLAAALMS+AKFDGAD+SEVVMSKAYAVGASFK  +L +L  + + G DF
Sbjct: 121 TNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKVLSLEVL--LIMKGTDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNF KA+LQGAVFKNTVLS STF++AQLQDAVFEDTIIGYIDLQKLC N TI+
Sbjct: 181 SNAVLDRVNFQKADLQGAVFKNTVLSASTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTIN 240

Query: 241 PEGRAELGCR 251
            +GRA LGCR
Sbjct: 241 ADGRATLGCR 248

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BLAST of Lsi05G001160 vs. TAIR10
Match: AT5G53490.3 (AT5G53490.3 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 292.0 bits (746), Expect = 3.6e-79
Identity = 155/267 (58.05%), Postives = 189/267 (70.79%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSAT-----------------RD 60
           MA+L +  ++N  S  FFS      +   P SL  + CSA                   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 61  GAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIG 120
           G   +++L P K + ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 121 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 180
           QANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 181 GKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDT 240
                        GV+F+NAV+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDT
Sbjct: 181 -------------GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDT 240

Query: 241 IIGYIDLQKLCVNPTISPEGRAELGCR 251
           IIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 241 IIGYIDLQKICRNESINEEGRLVLGCR 250

[Close]

BLAST of Lsi05G001160 vs. TAIR10
Match: AT1G12250.1 (AT1G12250.1 Pentapeptide repeat-containing protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-10
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 1


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E    G   G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHSNEN--FRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANL 195
            M E+ F G+  +   + KA A  A+F G              D S+ ++DR+   +ANL
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSG-------------ADLSDTLMDRMVLNEANL 198

Query: 196 QGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 250
             AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 TNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of Lsi05G001160 vs. NCBI nr
Match: gi|659111944|ref|XP_008455988.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-125
Identity = 229/250 (91.60%), Postives = 233/250 (93.20%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSR FFS KRPQI+YPFPHSLPRITCSATRDGA+PRENLSPCKHISTV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

[Close]

BLAST of Lsi05G001160 vs. NCBI nr
Match: gi|778680423|ref|XP_011651313.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 1.4e-122
Identity = 223/250 (89.20%), Postives = 230/250 (92.00%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA LS PLS NGFSR FFS +R +I+YPFPHSLPRITCSATRDGAEPRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

[Close]

BLAST of Lsi05G001160 vs. NCBI nr
Match: gi|703066942|ref|XP_010087838.1| (hypothetical protein L484_020914 [Morus notabilis])

HSP 1 Score: 357.5 bits (916), Expect = 2.0e-95
Identity = 182/252 (72.22%), Postives = 209/252 (82.94%), Query Frame = 1


Query: 2   ATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCS-ATRDGAEPREN--LSPCKHIS 61
           AT SIPL+QN F  RF  +KR  ++    +S PR+ CS  +RDG E +EN  +SP K + 
Sbjct: 3   ATSSIPLNQNVFRLRFKPSKRHALLPVESYSSPRVFCSEVSRDGPELKENNNMSPTKQLK 62

Query: 62  TVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 121
            VACG+LAVW +T  SPV+AA+QRLPPLSTEPNRCERAFVGNTIGQANGVYDKP+DLRFC
Sbjct: 63  NVACGVLAVWAVTTASPVVAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFC 122

Query: 122 DYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGV 181
           DY+NEK+ LKGKSLAAALMS+AKFDGAD++EVVMSKAYAVGASFK             GV
Sbjct: 123 DYSNEKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFK-------------GV 182

Query: 182 DFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPT 241
           DFSNAV+DRVNFGKA+LQGA+FKNTVLSGSTFDDA+L+DAVFEDTIIGY+DLQKLC N T
Sbjct: 183 DFSNAVIDRVNFGKADLQGALFKNTVLSGSTFDDAKLEDAVFEDTIIGYVDLQKLCTNKT 241

Query: 242 ISPEGRAELGCR 251
           ISP+GRAELGCR
Sbjct: 243 ISPDGRAELGCR 241

[Close]

BLAST of Lsi05G001160 vs. NCBI nr
Match: gi|567897328|ref|XP_006441152.1| (hypothetical protein CICLE_v10021983mg [Citrus clementina])

HSP 1 Score: 355.1 bits (910), Expect = 9.7e-95
Identity = 182/251 (72.51%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYP-FPHSLPRITCSATRDGAEPRENLSPCKHIST 60
           MAT+S+PLS N  S +  S  R +  +P   HS   + CSA R+ +EP+E+ S  K +  
Sbjct: 1   MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSARRNSSEPKESFSHLKELKG 60

Query: 61  VACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCD 120
           VACG LA W +T  SPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVD 180
           YTNEK+ LKGKSLAAALMS+AKFDGAD+SEVVMSKAYAVGASFK             GVD
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFK-------------GVD 180

Query: 181 FSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI 240
           FSNAVLDRVNFGKA+L+GAVFKNTVLSGSTF++AQLQDAVFEDTIIGYIDLQKLC N T+
Sbjct: 181 FSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTL 238

Query: 241 SPEGRAELGCR 251
           SP+GRAELGCR
Sbjct: 241 SPDGRAELGCR 238

[Close]

BLAST of Lsi05G001160 vs. NCBI nr
Match: gi|568877960|ref|XP_006491985.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Citrus sinensis])

HSP 1 Score: 352.4 bits (903), Expect = 6.3e-94
Identity = 181/251 (72.11%), Postives = 203/251 (80.88%), Query Frame = 1


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYP-FPHSLPRITCSATRDGAEPRENLSPCKHIST 60
           MAT+S+PLS N  SR+  S  R +  +P   HS   I CSA R+ +E +E+ S  K +  
Sbjct: 1   MATISVPLSHNTSSRQHLSTIRHRFHFPRSSHSPLTIACSARRNSSESKESFSHLKELKG 60

Query: 61  VACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCD 120
           VACG LA W +T  SPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVD 180
           YTNEK+ LKGKSLAAALMS+AKFDGAD+SEVVMSKAYAVGASFK             GVD
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFK-------------GVD 180

Query: 181 FSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI 240
           FSNAVLDRVNFGKA+L+GAVFKNTVLSGSTF++AQLQDAVFEDTIIGY+DLQKLC N T+
Sbjct: 181 FSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYVDLQKLCTNTTL 238

Query: 241 SPEGRAELGCR 251
           SP+GR ELGCR
Sbjct: 241 SPDGRDELGCR 238

The following BLAST results are available for this feature:

BLAST of Lsi05G001160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TL17_ARATH	1.5e-79	61.26	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=TL1...	[more]
TL203_ARATH	8.2e-09	28.49	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20....	[more]
RFR32_CYAA5	5.3e-08	30.08	Pentapeptide repeat protein Rfr32 OS=Cyanothece sp. (strain ATCC 51142) GN=rfr32...	[more]

BLAST of Lsi05G001160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC74_CUCSA	1.0e-122	89.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238170 PE=4 SV=1	[more]
W9QE42_9ROSA	1.4e-95	72.22	Uncharacterized protein OS=Morus notabilis GN=L484_020914 PE=4 SV=1	[more]
V4TLV7_9ROSI	6.8e-95	72.51	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021983mg PE=4 SV=1	[more]
B9I1Y5_POPTR	7.0e-92	70.80	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02510g PE=4 SV=2	[more]
A0A058ZZS0_EUCGR	1.1e-89	70.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00402 PE=4 SV=1	[more]

BLAST of Lsi05G001160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53490.3	3.6e-79	58.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	4.6e-10	28.49	Pentapeptide repeat-containing protein	[more]

BLAST of Lsi05G001160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111944\|ref\|XP_008455988.1\|	1.1e-125	91.60	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]	[more]
gi\|778680423\|ref\|XP_011651313.1\|	1.4e-122	89.20	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus]	[more]
gi\|703066942\|ref\|XP_010087838.1\|	2.0e-95	72.22	hypothetical protein L484_020914 [Morus notabilis]	[more]
gi\|567897328\|ref\|XP_006441152.1\|	9.7e-95	72.51	hypothetical protein CICLE_v10021983mg [Citrus clementina]	[more]
gi\|568877960\|ref\|XP_006491985.1\|	6.3e-94	72.11	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001646	5peptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001160.1	Lsi05G001160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 183..222 score: 1.1E-8coord: 127..164 score: 8.
None	No IPR available	PANTHER	PTHR14136	UNCHARACTERIZED	coord: 1..250 score: 1.4E
None	No IPR available	PANTHER	PTHR14136:SF11	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..250 score: 1.4E
None	No IPR available	unknown	SSF141571	Pentapeptide repeat-like	coord: 124..232 score: 2.49

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001160	Csa3G238170	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001160	CSPI03G19640	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001160	Cucsa.032310	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001160	CmaCh16G000360	Cucurbita maxima (Rimu)	cmalsiB318
Lsi05G001160	CmaCh18G013180	Cucurbita maxima (Rimu)	cmalsiB388
Lsi05G001160	CmoCh18G013480	Cucurbita moschata (Rifu)	cmolsiB373
Lsi05G001160	CmoCh16G000420	Cucurbita moschata (Rifu)	cmolsiB307
Lsi05G001160	Cla004271	Watermelon (97103) v1	lsiwmB361
Lsi05G001160	MELO3C019377	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001160	ClCG05G009090	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001160	MELO3C019377.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001160	Cla97C05G091400	Watermelon (97103) v2	lsiwmbB329
Lsi05G001160	Bhi01G001130	Wax gourd	lsiwgoB431
Lsi05G001160	Cp4.1LG14g07150	Cucurbita pepo (Zucchini)	cpelsiB178
Lsi05G001160	Cp4.1LG09g00290	Cucurbita pepo (Zucchini)	cpelsiB036
Lsi05G001160	CsGy3G019570	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001160	Carg20340	Silver-seed gourd	carlsiB488
Lsi05G001160	Carg15055	Silver-seed gourd	carlsiB904
Lsi05G001160	CsaV3_3G019700	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001160	Silver-seed gourd	carlsiB460
Lsi05G001160	Silver-seed gourd	carlsiB490
Lsi05G001160	Cucumber (Chinese Long) v3	cuclsiB401
Lsi05G001160	Watermelon (97103) v2	lsiwmbB318
Lsi05G001160	Watermelon (97103) v2	lsiwmbB339
Lsi05G001160	Wax gourd	lsiwgoB418
Lsi05G001160	Wax gourd	lsiwgoB442
Lsi05G001160	Bottle gourd (USVL1VR-Ls)	lsilsiB013
Lsi05G001160	Bottle gourd (USVL1VR-Ls)	lsilsiB158
Lsi05G001160	Cucumber (Gy14) v1	cgylsiB348
Lsi05G001160	Cucurbita maxima (Rimu)	cmalsiB289
Lsi05G001160	Cucurbita maxima (Rimu)	cmalsiB385
Lsi05G001160	Cucurbita maxima (Rimu)	cmalsiB584
Lsi05G001160	Cucurbita moschata (Rifu)	cmolsiB278
Lsi05G001160	Cucurbita moschata (Rifu)	cmolsiB370
Lsi05G001160	Cucurbita moschata (Rifu)	cmolsiB559
Lsi05G001160	Cucurbita pepo (Zucchini)	cpelsiB037
Lsi05G001160	Cucurbita pepo (Zucchini)	cpelsiB154
Lsi05G001160	Cucurbita pepo (Zucchini)	cpelsiB622
Lsi05G001160	Wild cucumber (PI 183967)	cpilsiB381
Lsi05G001160	Cucumber (Chinese Long) v2	culsiB379
Lsi05G001160	Melon (DHL92) v3.5.1	lsimeB337
Lsi05G001160	Watermelon (Charleston Gray)	lsiwcgB324
Lsi05G001160	Watermelon (97103) v1	lsiwmB376
Lsi05G001160	Cucumber (Gy14) v2	cgyblsiB343
Lsi05G001160	Melon (DHL92) v3.6.1	lsimedB352