Cucsa.032310 (gene) Cucumber (Gy14) v1

NameCucsa.032310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThylakoid lumenal 17.4 kDa protein
Locationscaffold00429 : 1656005 .. 1659353 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTTATCAACTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGACGTTCAAAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTCTTTTCTCTATCTCTTCTATCTATAGTTTTATGCATTGATTTACTCCAATAATTGCTACATTCTGTACCCTTTTGTGGGTAAATTGCGTTGGCTTCCTGCCCTTTGATTGCCTATTACATCTTGTTAAGCTTAGGATCAAGATGCTGGTTCGCCAAATTGGTTATTTCTTTGAATGAGTTCAAATTTGTAACAAAAAAATTAATGTGTTTGCATACCCTGAAATGTGCTTAGTCTAATACAATTAGATGGTAATTAGATGGTGTTTGGTGCGCTGAGTTGAGTTCTAAAGCATGGAATCAATGTGTTGAAATTAGTAAATCTATTTTAGAGGGGCATTGTTGTTTAGTCCGGAGATAGTAATCATTAGAAAGAGGAAGAGAGACAAAGAAGAAGATGAACTGATGTTGTTGACATTGATGAAGTTGAGTTATTTAACACCAATTTATGAAGTTGATGGGCTAAACACTTTCGTAGGATTCTTCACCAAGTAGAGGGAAACAAATATTATGGAAATTGGACATTAAGTTGGAGTAAACAACTCAATTTCAAAAGTAAACACCATTGAAGTTTGTACATTTATTGAGTAAATTTTTCTACCCTATATTTTTATTTTTTACATTTATCGAGTAACTTTATTTTCTTTCTTAATCTACTTTTCACAATTATCAAGCAACTCCATCTTAGAACTCTGTTACCTTTGTCTAACAACACAAACTTACTAATTCCACTCAATTGGTCCAACACCCCTAACTCTACTCAATTGGCCAAACACCCCTAGCTTCATATCTTATATCTTACAACACAAAACTACTAACTCCATCATATTACCTCTAGACTTATTAATTCCACTCAATTGGCCAAACACCCTCTAACTGAACTTGCATCGAAGTATTATGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTCGCTGCACTTACAGCTACCAGGGATGGGGCAGAACCAAGAGAAAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGGTTAATAGCATTTCTGTTCATTTATAGTTTATACTTTTAAGTTTTGTATTGAATAGTTTGTACCCTAGATAAATTTTCAACTATTTGGAATATATGGATATAATCAACTTTGCTGCAGTAATCCATCAACTCAAGTCCATGACAATATACTGTAGTATGTTGATTATATTTAATTTTTGCATTATTTTCTGTTGATTTGAAGTTTGTAGTGATTTATAACAGTTGACACGACTTTTAGAATAATGAAATGCTATTCAAATTTATCATGATATTTGGGTATGAACTGAAAATTCGCAAGCGCTATTCCGAACCTACAATGTTGCATTTAAATATAGGCTTAAGATGCAAGACCTAGTTATTTTTTTAGGGGGTTGAGTGTGCTGGTTTGGAAGCCCTACTTTTCCAGCTCCCTCCCACATCATTCTGAGCCCACATCCCTTTCTGGATGTTCTACGATACCATGATTATAAGGCTCTTTCTGATAGGATAACTTGTCAGTTACGTTTTCCTGATTCTAACTAAAATTCTGTTATGTACTTCACCAGTTGACATCCAGTTCATGTTACTCGATTTTCTTCTATTCATGTTATGTTTTTCCTTTTATAGTGATGATTGACTAATGTTATTCACTTTCTGTCGCAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTTATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGTAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCATACCCCACTCTAAGAAGGAAGTGGGTTGTTAACAAATCATTCATATTAGTGGTGATTTTATTAAGTTTTAAAATCACTTTCAAACATATTTTTGTTGCTCAAATTATGTTCAACATTTAATTATATACTTTTAGAAACGTACTATTAAATTTTATTTTGAATAATTTAAAAACATTTTAGAATGTTTTTTAAAATGACAATAACGATTTTAATCATTTTGAAAATCACTCCTAAACATGTCATTAGTTTGTAGACTCTGCTCTCAATAATGGTACATAGATAAAATCCACATGCTCAACATATGCTAATTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAACGTGGATGATCTCATTTTAATTTTTAACTGGAATGAAACATCAAAAGATGTTTCATACCCTGCTCTCTTCTTGTGCTTCAAGTAAATTTGATGGGAAGCCAAAAATGCATTCAAGTAGACTATTAAGAAGTTTCATATCTGTTGACCTATTAAGCTGCATGTTAATCCCATGATTGATCCTAAGCTGGTCATGGGTTTGCTAAAATTATTGGCGGATTTGTCATTTGGTTTTTAGTTTTTGGAAATTGAATCTATGAACACTCATGGCACTCTAAAAAGGATACATATAAGTACATGTTTTCTGTTTTAAGGACGACTCCATAAGAATCTTGAAAAAAAAACTCACAGTATGGGTTAAAATATCATGACAACGTTGCATATTGCAGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCACATATATAGTTTCAATACTTGCACTATTTGTATTGTACAATAAACAGCTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATCAAAAGAGATGACTCCCTCTCACTCCTATTGAAGCACTACGTGCTGTTTTCTATTTCTCATGGCGTTGTTTCACTGTTTCATGTAATTTGGGCTTGCAGGGGAAAAAAAGAAAGAGATTTGTC

mRNA sequence

ATGGCCGCTTTATCAACTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGACGTTCAAAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACCAGGGATGGGGCAGAACCAAGAGAAAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGTAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCACATATATAGTTTCAATACTTGCACTATTTGTATTGTACAATAAACAGCTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATCAAAAGAGATGACTCCCTCTCACTCCTATTGAAGCACTACGTGCTGTTTTCTATTTCTCATGGCGTTGTTTCACTGTTTCATGTAATTTGGGCTTGCAGGGGAAAAAAAGAAAGAGATTTGTC

Coding sequence (CDS)

ATGGCCGCTTTATCAACTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGACGTTCAAAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACCAGGGATGGGGCAGAACCAAGAGAAAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGTAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR*
BLAST of Cucsa.032310 vs. Swiss-Prot
Match: TL17_ARATH (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=TL17 PE=1 SV=2)

HSP 1 Score: 304.3 bits (778), Expect = 1.2e-81
Identity = 155/240 (64.58%), Postives = 186/240 (77.50%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSA---TRDGAEPRENLSPCKHI 60
           MA+L    + N  S  FFS    +     P SL  + CSA     +G   +++L P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRRE----PRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  STVACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRF 120
            ++AC  L    LT  SPVIAANQRLPPLSTEPDRCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA+F+NTVLSGSTF++A LED VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

BLAST of Cucsa.032310 vs. Swiss-Prot
Match: TL203_ARATH (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 68/241 (28.22%), Postives = 105/241 (43.57%), Query Frame = 1

Query: 7   PLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATR------DGAEPRENLSPCKHISTV 66
           P+     SRS  S  RS   Y F   L R    ++R      D +  RE        +T 
Sbjct: 10  PMKSLDISRSSSSVSRSP--YHFQRYLLRRLQLSSRSNLEIKDSSNTREGCCSSAESNTW 69

Query: 67  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 126
              L A  A    + VIA++  +P ++ E +R E    G   G  +       DL    +
Sbjct: 70  KRILSAAMA----AAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVH 129

Query: 127 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 186
           +NE    +  +  +A M ++ F G+  +   + KA A  A+F G D S+ ++DR+   +A
Sbjct: 130 SNEN--FRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEA 189

Query: 187 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELG 237
           NL  A+   +VL+ S    A++E A F D +I  +  Q LC      NP    + R  LG
Sbjct: 190 NLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLG 240

BLAST of Cucsa.032310 vs. Swiss-Prot
Match: RFR32_CYAA5 (Pentapeptide repeat protein Rfr32 OS=Cyanothece sp. (strain ATCC 51142) GN=rfr32 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 1

Query: 129 GKSLAAAL-----MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 188
           GKSL  A      ++D+ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 189 GALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 238
            A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179


HSP 2 Score: 47.4 bits (111), Expect = 2.6e-04
Identity = 35/131 (26.72%), Postives = 54/131 (41.22%), Query Frame = 1

Query: 115 LRFCDYTNEK---NQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAV 174
           L +  +TN     +      L  A+ + +   GADL    ++   A   SFKG D +NAV
Sbjct: 64  LTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLTNAV 123

Query: 175 LDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTI 234
           L                  ++  + FDDA++  A F   ++   ++ KLC     VNP  
Sbjct: 124 L---------------TEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKT 179

Query: 235 SPEGRAELGCR 238
               R  LGC+
Sbjct: 184 GVSTRESLGCQ 179


HSP 3 Score: 36.2 bits (82), Expect = 6.0e-01
Identity = 38/145 (26.21%), Postives = 55/145 (37.93%), Query Frame = 1

Query: 133 AAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVL 192
           ++A   D K  G D S          G S     F+NA L   NF +A+L+GA+F  + L
Sbjct: 45  SSASYEDVKLIGEDFS----------GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSAL 104

Query: 193 SG---------------STFDDAQLEDAV----------FED----------TIIGYIDL 238
            G               ++F  A L +AV          F+D           ++   ++
Sbjct: 105 IGADLHGADLTNGLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEV 164

BLAST of Cucsa.032310 vs. TrEMBL
Match: A0A0A0LC74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 8.6e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsa.032310 vs. TrEMBL
Match: V4TLV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021983mg PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.6e-98
Identity = 184/238 (77.31%), Postives = 204/238 (85.71%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYP-FPHSLPRITCSATRDGAEPRENLSPCKHIST 60
           MA +S PLSHN  S    ST R +  +P   HS   + CSA R+ +EP+E+ S  K +  
Sbjct: 1   MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSARRNSSEPKESFSHLKELKG 60

Query: 61  VACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120
           VACG LA WA+T  SPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180
           YTNEK+ LKGKSLAAALMSDAKFDGAD+SEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 ANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           A+L+GA+FKNTVLSGSTF++AQL+DAVFEDTIIGYIDLQKLC N T+SP+GRAELGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTLSPDGRAELGCR 238

BLAST of Cucsa.032310 vs. TrEMBL
Match: W9QE42_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020914 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.8e-96
Identity = 180/239 (75.31%), Postives = 206/239 (86.19%), Query Frame = 1

Query: 2   AALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCS-ATRDGAEPREN--LSPCKHIS 61
           A  S PL+ N F   F  ++R  ++    +S PR+ CS  +RDG E +EN  +SP K + 
Sbjct: 3   ATSSIPLNQNVFRLRFKPSKRHALLPVESYSSPRVFCSEVSRDGPELKENNNMSPTKQLK 62

Query: 62  TVACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFC 121
            VACG+LAVWA+T  SPV+AA+QRLPPLSTEP+RCERAFVGNTIGQANGVYDKP+DLRFC
Sbjct: 63  NVACGVLAVWAVTTASPVVAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFC 122

Query: 122 DYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 181
           DY+NEK+ LKGKSLAAALMSDAKFDGAD++EVVMSKAYAVGASFKGVDFSNAV+DRVNFG
Sbjct: 123 DYSNEKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVIDRVNFG 182

Query: 182 KANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           KA+LQGALFKNTVLSGSTFDDA+LEDAVFEDTIIGY+DLQKLC N TISP+GRAELGCR
Sbjct: 183 KADLQGALFKNTVLSGSTFDDAKLEDAVFEDTIIGYVDLQKLCTNKTISPDGRAELGCR 241

BLAST of Cucsa.032310 vs. TrEMBL
Match: B9I1Y5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02510g PE=4 SV=2)

HSP 1 Score: 349.4 bits (895), Expect = 3.5e-93
Identity = 176/237 (74.26%), Postives = 201/237 (84.81%), Query Frame = 1

Query: 2   AALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCK-HISTV 61
           A  S PLS N F    FS+ R +   P  HS  +I CS + DG++ RE+L   K  I+ V
Sbjct: 4   ATFSLPLSQNKFPLYHFSSARRRFPIPDLHSPLKICCSGSGDGSKSRESLFQFKKEINYV 63

Query: 62  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 121
           ACG+LA WA+T  SPVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 64  ACGILAAWAVTAASPVIAAGQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDY 123

Query: 122 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 181
           TN+K+ LKGKSLAAALMSDAKFDGAD++EVVMSKAYAVGASF+GVDFSNAVLDRVNFGKA
Sbjct: 124 TNDKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFRGVDFSNAVLDRVNFGKA 183

Query: 182 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           +L+GA+FKNTVLSGSTFD+AQLEDA+FEDTIIGYIDLQK+C N +I P+GRAELGCR
Sbjct: 184 DLKGAVFKNTVLSGSTFDEAQLEDAIFEDTIIGYIDLQKICRNTSIGPDGRAELGCR 240

BLAST of Cucsa.032310 vs. TrEMBL
Match: B9SJT2_RICCO (Thylakoid lumenal 17.4 kDa protein, chloroplast, putative OS=Ricinus communis GN=RCOM_0735340 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.1e-90
Identity = 176/237 (74.26%), Postives = 197/237 (83.12%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA +S PLS    S     + RS+   P  H   +I CS + DG++ +    P K + +V
Sbjct: 1   MATISFPLSVRSLS-----SERSRFPVPQLHPPIKIICSGSADGSKSK----PFKELQSV 60

Query: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA WA+T+ SPVIAA+QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAAWAVTSASPVIAASQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+ LKGKSLAAALMSDAKFDGAD+SEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGA+FKNTVLSGSTFD+AQL DAVFEDTIIGYIDLQKLC N +I+ EGR  LGCR
Sbjct: 181 NLQGAVFKNTVLSGSTFDEAQLADAVFEDTIIGYIDLQKLCKNTSINLEGREILGCR 228

BLAST of Cucsa.032310 vs. TAIR10
Match: AT5G53490.3 (AT5G53490.3 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 298.9 bits (764), Expect = 2.8e-81
Identity = 155/254 (61.02%), Postives = 186/254 (73.23%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSAT-----------------RD 60
           MA+L    + N  S  FFS    +     P SL  + CSA                   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRRE----PRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 61  GAEPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIG 120
           G   +++L P K + ++AC  L    LT  SPVIAANQRLPPLSTEPDRCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 121 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 180
           QANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 181 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 238
           GV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF++A LED VFEDTIIGYIDLQK+C N
Sbjct: 181 GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN 240

BLAST of Cucsa.032310 vs. TAIR10
Match: AT1G12250.1 (AT1G12250.1 Pentapeptide repeat-containing protein)

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12
Identity = 68/241 (28.22%), Postives = 105/241 (43.57%), Query Frame = 1

Query: 7   PLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATR------DGAEPRENLSPCKHISTV 66
           P+     SRS  S  RS   Y F   L R    ++R      D +  RE        +T 
Sbjct: 10  PMKSLDISRSSSSVSRSP--YHFQRYLLRRLQLSSRSNLEIKDSSNTREGCCSSAESNTW 69

Query: 67  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 126
              L A  A    + VIA++  +P ++ E +R E    G   G  +       DL    +
Sbjct: 70  KRILSAAMA----AAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVH 129

Query: 127 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 186
           +NE    +  +  +A M ++ F G+  +   + KA A  A+F G D S+ ++DR+   +A
Sbjct: 130 SNEN--FRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEA 189

Query: 187 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELG 237
           NL  A+   +VL+ S    A++E A F D +I  +  Q LC      NP    + R  LG
Sbjct: 190 NLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLG 240

BLAST of Cucsa.032310 vs. NCBI nr
Match: gi|778680423|ref|XP_011651313.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 477.6 bits (1228), Expect = 1.2e-131
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsa.032310 vs. NCBI nr
Match: gi|659111944|ref|XP_008455988.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 458.8 bits (1179), Expect = 6.0e-126
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA LS P S NGFSRSFFST+R +IVYPFPHSLPRITCSATRDGA+PRENLSPCKHISTV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsa.032310 vs. NCBI nr
Match: gi|567897328|ref|XP_006441152.1| (hypothetical protein CICLE_v10021983mg [Citrus clementina])

HSP 1 Score: 367.1 bits (941), Expect = 2.4e-98
Identity = 184/238 (77.31%), Postives = 204/238 (85.71%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYP-FPHSLPRITCSATRDGAEPRENLSPCKHIST 60
           MA +S PLSHN  S    ST R +  +P   HS   + CSA R+ +EP+E+ S  K +  
Sbjct: 1   MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSARRNSSEPKESFSHLKELKG 60

Query: 61  VACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120
           VACG LA WA+T  SPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180
           YTNEK+ LKGKSLAAALMSDAKFDGAD+SEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 ANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           A+L+GA+FKNTVLSGSTF++AQL+DAVFEDTIIGYIDLQKLC N T+SP+GRAELGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTLSPDGRAELGCR 238

BLAST of Cucsa.032310 vs. NCBI nr
Match: gi|568877960|ref|XP_006491985.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Citrus sinensis])

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97
Identity = 183/238 (76.89%), Postives = 203/238 (85.29%), Query Frame = 1

Query: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYP-FPHSLPRITCSATRDGAEPRENLSPCKHIST 60
           MA +S PLSHN  SR   ST R +  +P   HS   I CSA R+ +E +E+ S  K +  
Sbjct: 1   MATISVPLSHNTSSRQHLSTIRHRFHFPRSSHSPLTIACSARRNSSESKESFSHLKELKG 60

Query: 61  VACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120
           VACG LA WA+T  SPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180
           YTNEK+ LKGKSLAAALMSDAKFDGAD+SEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 ANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           A+L+GA+FKNTVLSGSTF++AQL+DAVFEDTIIGY+DLQKLC N T+SP+GR ELGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYVDLQKLCTNTTLSPDGRDELGCR 238

BLAST of Cucsa.032310 vs. NCBI nr
Match: gi|703066942|ref|XP_010087838.1| (hypothetical protein L484_020914 [Morus notabilis])

HSP 1 Score: 358.6 bits (919), Expect = 8.4e-96
Identity = 180/239 (75.31%), Postives = 206/239 (86.19%), Query Frame = 1

Query: 2   AALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCS-ATRDGAEPREN--LSPCKHIS 61
           A  S PL+ N F   F  ++R  ++    +S PR+ CS  +RDG E +EN  +SP K + 
Sbjct: 3   ATSSIPLNQNVFRLRFKPSKRHALLPVESYSSPRVFCSEVSRDGPELKENNNMSPTKQLK 62

Query: 62  TVACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFC 121
            VACG+LAVWA+T  SPV+AA+QRLPPLSTEP+RCERAFVGNTIGQANGVYDKP+DLRFC
Sbjct: 63  NVACGVLAVWAVTTASPVVAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFC 122

Query: 122 DYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 181
           DY+NEK+ LKGKSLAAALMSDAKFDGAD++EVVMSKAYAVGASFKGVDFSNAV+DRVNFG
Sbjct: 123 DYSNEKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVIDRVNFG 182

Query: 182 KANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           KA+LQGALFKNTVLSGSTFDDA+LEDAVFEDTIIGY+DLQKLC N TISP+GRAELGCR
Sbjct: 183 KADLQGALFKNTVLSGSTFDDAKLEDAVFEDTIIGYVDLQKLCTNKTISPDGRAELGCR 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TL17_ARATH1.2e-8164.58Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=TL1... [more]
TL203_ARATH1.1e-1028.22Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20.... [more]
RFR32_CYAA51.1e-0730.25Pentapeptide repeat protein Rfr32 OS=Cyanothece sp. (strain ATCC 51142) GN=rfr32... [more]
Match NameE-valueIdentityDescription
A0A0A0LC74_CUCSA8.6e-132100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238170 PE=4 SV=1[more]
V4TLV7_9ROSI1.6e-9877.31Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021983mg PE=4 SV=1[more]
W9QE42_9ROSA5.8e-9675.31Uncharacterized protein OS=Morus notabilis GN=L484_020914 PE=4 SV=1[more]
B9I1Y5_POPTR3.5e-9374.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02510g PE=4 SV=2[more]
B9SJT2_RICCO2.1e-9074.26Thylakoid lumenal 17.4 kDa protein, chloroplast, putative OS=Ricinus communis GN... [more]
Match NameE-valueIdentityDescription
AT5G53490.32.8e-8161.02 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G12250.16.1e-1228.22 Pentapeptide repeat-containing protein[more]
Match NameE-valueIdentityDescription
gi|778680423|ref|XP_011651313.1|1.2e-131100.00PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus][more]
gi|659111944|ref|XP_008455988.1|6.0e-12695.78PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo][more]
gi|567897328|ref|XP_006441152.1|2.4e-9877.31hypothetical protein CICLE_v10021983mg [Citrus clementina][more]
gi|568877960|ref|XP_006491985.1|1.5e-9776.89PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Citrus sinensis][more]
gi|703066942|ref|XP_010087838.1|8.4e-9675.31hypothetical protein L484_020914 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.032310.1Cucsa.032310.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF13599Pentapeptide_4coord: 160..218
score: 1.
NoneNo IPR availablePANTHERPTHR14136UNCHARACTERIZEDcoord: 13..237
score: 1.4E
NoneNo IPR availablePANTHERPTHR14136:SF11THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 13..237
score: 1.4E
NoneNo IPR availableunknownSSF141571Pentapeptide repeat-likecoord: 115..219
score: 6.8

The following gene(s) are paralogous to this gene:

None