Cucsa.374360 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.374360
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Unknown protein
Location	scaffold03733 : 260006 .. 262521 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCAGTCATCCAACATACCACCGAAAGGGCCAGAGGGGCCTCGTTTTGTCGTACGAAAAAGAAGCAACGGTGAAATTAACTTGACCCAAAAAGTGGACAAATTTTCTAGGATATTTAATAATAGTAATAAAAAAAAAAACTTGTAGGAGAATCACAAAAACTTCTTCATTATATTCTAGAATACTCCATGCAATATTAAAAGGAGACTGGAGGACTGAATTAGTCCAAGGAAACCACTTTAGAGTATTGATCAAATCTTTTTTGTTTCCTAATGGCAGAAACACCACCACATGAAATCTCCCTAGACATGAATAAACTCAATTCCTTGATCTTTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACGTGGGGGGGAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTCTAAGTTTAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAGCTTAAACCCTTCATCTTCTTCACCTCTTCCTTCAAGGCTTTTTGCTGCTGTTATGTTGACTTCCTTCATATTTTCCTATGATGGAGTTATCCTTCAAAAGCCATTCCCAAAAACTGCACAGCTGTTGCAAACGTTCGGTGCTCTATTTGCTGCAATTGGTACCTGCATCATAGGAAGTCTTCTACTCTATCCAAACTTCACTTGGATCTGTTGGCTGGCGGCTGGCCTCATCTTGCCAGCCTTTATTATATCATTCAAGTGAATATGACAGAATCTGCATCCCATTGTCCGGAGATGGACAGAGGGTGCAATTCTGTAGAATCCATGCCCATGTGTTTTTATCTCTTTTGACAGTCTCTGTTTCTTGACCTTGTGTGGTTCATCACCAAGACCACATCTGCTCCAATTTCCCTGAAAATTCATGTTATTCTACAACTTATGTAAAGACATGATAACTCTGCCTGTGTCGTGCCTTAAGCATCATTTCTTCCACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGTTCTAAAGACGGAGGCTTGAAGTATAAGTAGCTATATTTTCATCAAAGTACACTAGTACACTAAAGATGGCAGCATCAAGAAAGATGGATTCTCTCGTTGGAGTAGACTGATGCAGAGAAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTTTCGACAAAAGAAAAGTTTACATATTTTTTAGTCAGTGCAATTAATAGTGGAAAGGGCACGATATGTTGAATATTATTAGAAAATATCTATAAACTACACCATTATTCATACAACATGGGTGAGGCACACACATGAGAACTACAACAAAGTCAATAATAAATCAAGGTTCACAATAACATCCATCCATAACAAGACGTAAACTCTCTAGAGGCTGCAGAGGTAAGTGTACACTTGAATCGTGTAAACTCCAAGTGAGATAACTGATTAGCAAAAAAAGATAATTGCATTATGTCCTTTCCAGTTCTGCCTCAATCTCATGCAATTAACTGAGGCAACAAAGAGAAGAAAAGGAGAGCTTTCAATGTCGCACTATGCTCGTATGGCCTGAGATACAAGTTCCCTGCAGACCATGAATTTAAGTGCTACCCTGTATTGCCTACTTCCCCTAAATTATTTGAAAATATCTAAATGGACAGTTAACATACATAATTAATCTATAAAAAATGGAAGAAAAGAAAGAGGTAATTTGAAAGACGTGAAAAAATGAATAATGGATATAGTAATTTCACATTCAAACTGAAACACCAATTATATATATAATATGGTGTGAAACAGCAAAATAGCAAAGCAATCAGAGAACTTTGAAGACCAGAATGAATGATATAAGTTCCACATCAATTTCAGATAATAAAGTTTCCATCATCTTGCTCTGCTTCTCTTATAACAACAAGTTGATCAATTCAATAAAAAAGAAAAACATATCTGCATCAATTCACTTATCCTTAAAGGATATCAAAATCACATTTTCCTTTTTTTTTTCAAAAAAAAAATGTAAAGTGAACAAACATAAGGCAACAACAATCAGAGAACTTTGAAGGCATAGCACAATATGAGTTAGGCACATCATATATTCACCTCAAAAAAAACCTCATCATTTTGTTGGCTATATCTTACATTATTTAGAGTCAAGTTAAGACAACCCCATGAAAAGGGAACAGGACATTTCGAAAGTAAACATTCTTAAGACGAGTTTATAGTTGTTTCTTTGGCTAAGCAGGGTTGGGCTGGAGAAAAAAATCCGCCACAACCATAGATGTAAAAGCCAAAATGAATGTAGCACCATAAGTATACCCTTTTCTCGATTTTCCTTGTCACTAAACTGGAAGAAACAAGGGGCTATTCGGTGCATCAAATCATGAAGTAAAAGGGAATTCAAATATTTATGCTAATGGCTAAGTAATGCGCCGCTTACCAGAGAGAGGATATTCGAAGATGATGATCTCCA

mRNA sequence

CCATCAGTCATCCAACATACCACCGAAAGGGCCAGAGGGGCCTCGTTTTGTCGTACGAAAAAGAAGCAACGGTGAAATTAACTTGACCCAAAAAGTGGACAAATTTTCTAGGatatttaataatagtaataaaaaaaaaaaCTTGTAGGAGAATCACAAAAACTTCTTCATTATATTCTAGAATACTCCATGCAATATTAAAAGGAGACTGGAGGACTGAATTAGTCCAAGGAAACCACTTTAGAGTATTGATCAAATCTTTTTTGTTTCCTAATGGCAGAAACACCACCACATGAAATCTCCCTAGACATGAATAAACTCAATTCCTTGATCTTTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACGTGGGGGGGAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTCTAAGTTTAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAGCTTAAACCCTTCATCTTCTTCACCTCTTCCTTCAAGGCTTTTTGCTGCTGTTATGTTGACTTCCTTCATATTTTCCTATGATGGAGTTATCCTTCAAAAGCCATTCCCAAAAACTGCACAGCTGTTGCAAACGTTCGGTGCTCTATTTGCTGCAATTGGTACCTGCATCATAGGAAGTCTTCTACTCTATCCAAACTTCACTTGGATCTGTTGGCTGGCGGCTGGCCTCATCTTGCCAGCCTTTATTATATCATTCAAGTGAATATGACAGAATCTGCATCCCATTGTCCGGAGATGGACAGAGGGTGCAATTCTGTAGAATCCATGCCCATGTGTTTTTATCTCTTTTGACAGTCTCTGTTTCTTGACCTTGTGTGGTTCATCACCAAGACCACATCTGCTCCAATTTCCCTGAAAATTCATGTTATTCTACAACTTATGTAAAGACATGATAACTCTGCCTGTGTCGTGCCTTAAGCATCATTTCTTCCACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGTTCTAAAGACGGAGGCTTGAAGTATAAGTAGCTATATTTTCATCAAAGTACACTAGTACACTAAAGATGGCAGCATCAAGAAAGATGGATTCTCTCGTTGGAGTAGACTGATGCAGAGAAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTTTCGACAAAAGAAAAGTTTACATATTTTTTAGTCAGTGCAATTAATAGTGGAAAGGGCACGATATGTTGAATATTATTAGAAAATATCTATAAACTACACCATTATTCATACAACATGGGTGAGGCACACACATGAGAACTACAACAAAGTCAATAATAAATCAAGGTTCACAATAACATCCATCCATAACAAGACGTAAACTCTCTAGAGGCTGCAGAGGTAAGTGTACACTTGAATCGTGTAAACTCCAAGTGAGATAACTGATTAGCAAAAAAAGATAATTGCATTATGTCCTTTCCAGTTCTGCCTCAATCTCATGCAATTAACTGAGGCAACAAAGAGAAGAAAAGGAGAGCTTTCAATGTCGCACTATGCTCGTATGGCCTGAGATACAAGTTCCCTGCAGACCATGAATTTAAGTGCTACCCTGTATTGCCTACTTCCCCTAAATTATTTGAAAATATCTAAATGGACAGTTAACATACATAATTAATCTATAAAAAATGGAAGAAAAGAAAGAGGTAATTTGAAAGACGTGAAAAAATGAATAATGGATATAGTAATTTCACATTCAAACTGAAACACCAATTATATATATAATATGGTGTGAAACAGCAAAATAGCAAAGCAATCAGAGAACTTTGAAGACCAGAATGAATGATATAAGTTCCACATCAATTTCAGATAATAAAGTTTCCATCATCTTGCTCTGCTTCTCTTATAACAACAAGTTGATCAATTCAATAAAAAAGAAAAACATATCTGCATCAATTCACTTATCCTTAAAGGATATCAAAATCACATTTTCCTTTTTTTTTTCAAAAAAAAAATGTAAAGTGAACAAACATAAGGCAACAACAATCAGAGAACTTTGAAGGCATAGCACAATATGAGTTAGGCACATCATATATTCACCTCAAAAAAAACCTCATCATTTTGTTGGCTATATCTTACATTATTTAGAGTCAAGTTAAGACAACCCCATGAAAAGGGAACAGGACATTTCGAAAGTAAACATTCTTAAGACGAGTTTATAGTTGTTTCTTTGGCTAAGCAGGGTTGGGCTGGAGAAAAAAATCCGCCACAACCATAGATGTAAAAGCCAAAATGAATGTAGCACCATAAGTATACCCTTTTCTCGATTTTCCTTGTCACTAAACTGGAAGAAACAAGGGGCTATTCGGTGCATCAAATCATGAAGTAAAAGGGAATTCAAATATTTATGCTAATGGCTAAGTAATGCGCCGCTTACCAGAGAGAGGATATTCGAAGATGATGATCTCCA

Coding sequence (CDS)

ATGGCAGAAACACCACCACATGAAATCTCCCTAGACATGAATAAACTCAATTCCTTGATCTTTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACGTGGGGGGGAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTCTAAGTTTAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAGCTTAAACCCTTCATCTTCTTCACCTCTTCCTTCAAGGCTTTTTGCTGCTGTTATGTTGACTTCCTTCATATTTTCCTATGATGGAGTTATCCTTCAAAAGCCATTCCCAAAAACTGCACAGCTGTTGCAAACGTTCGGTGCTCTATTTGCTGCAATTGGTACCTGCATCATAGGAAGTCTTCTACTCTATCCAAACTTCACTTGGATCTGTTGGCTGGCGGCTGGCCTCATCTTGCCAGCCTTTATTATATCATTCAAGTGA

Protein sequence

MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQFGNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK*

Homology

[Close]

BLAST of Cucsa.374360 vs. TrEMBL
Match: A0A0A0KQ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.0e-87
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1


Query: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60
           MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120
           GNTFLSL FQAI+GLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL
Sbjct: 61  GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120

Query: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 165
           QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164

[Close]

BLAST of Cucsa.374360 vs. TrEMBL
Match: A0A0A0KJN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-29
Identity = 78/166 (46.99%), Postives = 101/166 (60.84%), Query Frame = 1


Query: 3   ETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQ--- 62
           E+   +IS+DMN L SLI ++  RNP I+           LPI I MQ  SP NS +   
Sbjct: 2   ESSSQQISIDMNHLYSLITSINERNPEING----------LPICIIMQTASPANSSKTEN 61

Query: 63  -FGNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQ 122
             G T L L FQA+L LF++ + +SS PL + LF A +L SF  S+ GV LQ  FP+ A 
Sbjct: 62  NVGTTILGLTFQAVLALFIT-SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIAL 121

Query: 123 LLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 165
           L +  GAL AAIG CI+ SLL++ NF WI WLA G  L AF++SF+
Sbjct: 122 LFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

[Close]

BLAST of Cucsa.374360 vs. TrEMBL
Match: A0A0A0KJP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-27
Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = 1


Query: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPV---NS 60
           MA T  H+ SLDM+  +S I  ++ RN G+  C      S+CLP++I+MQ+       +S
Sbjct: 1   MASTS-HQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSS 60

Query: 61  PQFGNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120
            + G   LSL+FQA+L LF+S  P+S  PL    FAA +  SF  S+  + L   FP+TA
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 QLLQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 165
            L +  GALF+A G C I S LL++ NF WICW+A    +  F +SFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

[Close]

BLAST of Cucsa.374360 vs. TrEMBL
Match: A0A061EGV0_THECC (Ileal sodium/bile acid cotransporter, putative OS=Theobroma cacao GN=TCM_011398 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.3e-13
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1


Query: 22  AVTNRNPGISSCTWGGAASDCLPIYI-----KMQRPSPVNSPQFGNTFLSLNFQAILGLF 81
           A+T      +S  W   A DC+P+ I     +MQ   P      G T LSL+FQ ++ L 
Sbjct: 59  AITRMRFYTASYQWRSQALDCIPLSINSLEIEMQSYQPRPPVSLGKTILSLSFQIVVALA 118

Query: 82  LSLNPSSSSP-LPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFAAIGTCII 141
           LS +   +   LP  +    M+ +F  S+ G+ L+  +PK A +++  G+L AA+G  I+
Sbjct: 119 LSSSMGQTHHVLPIDIVKISMIMAFAASFSGIFLRSSYPKMANIIENIGSLIAAVGFFIM 178

Query: 142 GSLLLYPNFTWICWLAAGLILPAFIIS 163
            S+ L  N  W+ WLA    L AF  S
Sbjct: 179 TSIFLPGNLYWVTWLACAFSLLAFFSS 205

[Close]

BLAST of Cucsa.374360 vs. NCBI nr
Match: gi|700194629|gb|KGN49806.1| (hypothetical protein Csa_5G136900 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 2.9e-87
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1


Query: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60
           MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120
           GNTFLSL FQAI+GLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL
Sbjct: 61  GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120

Query: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 165
           QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164

[Close]

BLAST of Cucsa.374360 vs. NCBI nr
Match: gi|700194626|gb|KGN49803.1| (hypothetical protein Csa_5G136870 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 4.7e-29
Identity = 78/166 (46.99%), Postives = 101/166 (60.84%), Query Frame = 1


Query: 3   ETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQ--- 62
           E+   +IS+DMN L SLI ++  RNP I+           LPI I MQ  SP NS +   
Sbjct: 2   ESSSQQISIDMNHLYSLITSINERNPEING----------LPICIIMQTASPANSSKTEN 61

Query: 63  -FGNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQ 122
             G T L L FQA+L LF++ + +SS PL + LF A +L SF  S+ GV LQ  FP+ A 
Sbjct: 62  NVGTTILGLTFQAVLALFIT-SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIAL 121

Query: 123 LLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 165
           L +  GAL AAIG CI+ SLL++ NF WI WLA G  L AF++SF+
Sbjct: 122 LFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

[Close]

BLAST of Cucsa.374360 vs. NCBI nr
Match: gi|700194631|gb|KGN49808.1| (hypothetical protein Csa_5G137410 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 4.4e-27
Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = 1


Query: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPV---NS 60
           MA T  H+ SLDM+  +S I  ++ RN G+  C      S+CLP++I+MQ+       +S
Sbjct: 1   MASTS-HQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSS 60

Query: 61  PQFGNTFLSLNFQAILGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120
            + G   LSL+FQA+L LF+S  P+S  PL    FAA +  SF  S+  + L   FP+TA
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 QLLQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 165
            L +  GALF+A G C I S LL++ NF WICW+A    +  F +SFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

[Close]

BLAST of Cucsa.374360 vs. NCBI nr
Match: gi|645277436|ref|XP_008243769.1| (PREDICTED: uncharacterized protein LOC103341994 [Prunus mume])

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13
Identity = 49/143 (34.27%), Postives = 72/143 (50.35%), Query Frame = 1


Query: 34  TWGG-AASDCLPIY-----IKMQRPSPVNSPQFGNTFLSLNFQAILGLFLSLNPSSSSP- 93
           +W G  A DCLPIY     I++Q          G T L L FQAI+GL L+ NP      
Sbjct: 67  SWSGHQAGDCLPIYLHGCQIEVQSYQSKAPLSLGKTVLGLTFQAIVGLTLASNPGQPDQD 126

Query: 94  ------LPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFAAIGTCIIGSLLL 153
                 LP  +    M+ +F   +  + L + +P+ A L++  G++ AA+G  ++ S+ L
Sbjct: 127 QDQPHLLPLHMVGVAMVIAFAACFSAIFLTRAYPRAASLIEKIGSVSAALGFFLMTSIFL 186

Query: 154 YPNFTWICWLAAGLILPAFIISF 164
              F WICWLA    L AF ++F
Sbjct: 187 SNIFIWICWLACAFSLLAFTLAF 209

[Close]

BLAST of Cucsa.374360 vs. NCBI nr
Match: gi|590698393|ref|XP_007045702.1| (Ileal sodium/bile acid cotransporter, putative [Theobroma cacao])

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-12
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1


Query: 22  AVTNRNPGISSCTWGGAASDCLPIYI-----KMQRPSPVNSPQFGNTFLSLNFQAILGLF 81
           A+T      +S  W   A DC+P+ I     +MQ   P      G T LSL+FQ ++ L 
Sbjct: 59  AITRMRFYTASYQWRSQALDCIPLSINSLEIEMQSYQPRPPVSLGKTILSLSFQIVVALA 118

Query: 82  LSLNPSSSSP-LPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFAAIGTCII 141
           LS +   +   LP  +    M+ +F  S+ G+ L+  +PK A +++  G+L AA+G  I+
Sbjct: 119 LSSSMGQTHHVLPIDIVKISMIMAFAASFSGIFLRSSYPKMANIIENIGSLIAAVGFFIM 178

Query: 142 GSLLLYPNFTWICWLAAGLILPAFIIS 163
            S+ L  N  W+ WLA    L AF  S
Sbjct: 179 TSIFLPGNLYWVTWLACAFSLLAFFSS 205

The following BLAST results are available for this feature:

BLAST of Cucsa.374360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ03_CUCSA	2.0e-87	98.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136900 PE=4 SV=1	[more]
A0A0A0KJN8_CUCSA	3.3e-29	46.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136870 PE=4 SV=1	[more]
A0A0A0KJP2_CUCSA	3.1e-27	42.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137410 PE=4 SV=1	[more]
A0A061EGV0_THECC	7.3e-13	33.33	Ileal sodium/bile acid cotransporter, putative OS=Theobroma cacao GN=TCM_011398 ...	[more]

BLAST of Cucsa.374360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194629\|gb\|KGN49806.1\|	2.9e-87	98.78	hypothetical protein Csa_5G136900 [Cucumis sativus]	[more]
gi\|700194626\|gb\|KGN49803.1\|	4.7e-29	46.99	hypothetical protein Csa_5G136870 [Cucumis sativus]	[more]
gi\|700194631\|gb\|KGN49808.1\|	4.4e-27	42.26	hypothetical protein Csa_5G137410 [Cucumis sativus]	[more]
gi\|645277436\|ref\|XP_008243769.1\|	1.6e-13	34.27	PREDICTED: uncharacterized protein LOC103341994 [Prunus mume]	[more]
gi\|590698393\|ref\|XP_007045702.1\|	1.0e-12	33.33	Ileal sodium/bile acid cotransporter, putative [Theobroma cacao]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.374360.1	Cucsa.374360.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.374360	Csa5G136870	Cucumber (Chinese Long) v2	cgycuB523
Cucsa.374360	MELO3C005175	Melon (DHL92) v3.5.1	cgymeB607
Cucsa.374360	CSPI05G02590	Wild cucumber (PI 183967)	cgycpiB552
Cucsa.374360	CmaCh15G008430	Cucurbita maxima (Rimu)	cgycmaB1032
Cucsa.374360	CmoCh04G022860	Cucurbita moschata (Rifu)	cgycmoB1032
Cucsa.374360	CmoCh15G008750	Cucurbita moschata (Rifu)	cgycmoB1031
Cucsa.374360	Lsi09G007790	Bottle gourd (USVL1VR-Ls)	cgylsiB605
Cucsa.374360	Cp4.1LG01g18800	Cucurbita pepo (Zucchini)	cgycpeB0987
Cucsa.374360	MELO3C005175.2	Melon (DHL92) v3.6.1	cgymedB604
Cucsa.374360	CsaV3_5G018790	Cucumber (Chinese Long) v3	cgycucB567
Cucsa.374360	Cla97C01G007730	Watermelon (97103) v2	cgywmbB642
Cucsa.374360	Bhi12G000922	Wax gourd	cgywgoB749

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.374360	Silver-seed gourd	carcgyB0551
Cucsa.374360	Silver-seed gourd	carcgyB0957
Cucsa.374360	Cucurbita maxima (Rimu)	cgycmaB1033
Cucsa.374360	Watermelon (Charleston Gray)	cgywcgB638
Cucsa.374360	Watermelon (97103) v1	cgywmB675
Cucsa.374360	Cucurbita pepo (Zucchini)	cgycpeB0986