MELO3C005175 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005175
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionERD (early-responsive to dehydration stress) family protein
Locationchr9 : 17037182 .. 17037670 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAACTAAACCACATGAAATCTCCCTAGACATGAATGAACTCTATTCCTTCATCACTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACCTGGGGGACAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTGTTAGTTCAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAATTTACCCCCTTCTCCTCCACCTCTTTCAGAGCTTATTGGGACTGTTATGTTGACTGCCTTCGTGTTTTCTTTTTGTGGAGTTCTCCTTCAAAAGCCATTCCCAAAAATTGCACATCTGTTGCAAATGTTCGGTGCTCTATTGGCTGCAATTGGTGTCTGCATTATGGGAAGTCCTCTACTCCATCCAAACCTGACTTGGATCCGTTGGCTGGCGTGTGGCCTCATCTTGCCAGCCTTTATTACATCATTCAAGTGA

mRNA sequence

ATGGCAGAAACTAAACCACATGAAATCTCCCTAGACATGAATGAACTCTATTCCTTCATCACTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACCTGGGGGACAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTGTTAGTTCAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAATTTACCCCCTTCTCCTCCACCTCTTTCAGAGCTTATTGGGACTGTTATGTTGACTGCCTTCGTGTTTTCTTTTTGTGGAGTTCTCCTTCAAAAGCCATTCCCAAAAATTGCACATCTGTTGCAAATGTTCGGTGCTCTATTGGCTGCAATTGGTGTCTGCATTATGGGAAGTCCTCTACTCCATCCAAACCTGACTTGGATCCGTTGGCTGGCGTGTGGCCTCATCTTGCCAGCCTTTATTACATCATTCAAGTGA

Coding sequence (CDS)

ATGGCAGAAACTAAACCACATGAAATCTCCCTAGACATGAATGAACTCTATTCCTTCATCACTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACCTGGGGGACAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTGTTAGTTCAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAATTTACCCCCTTCTCCTCCACCTCTTTCAGAGCTTATTGGGACTGTTATGTTGACTGCCTTCGTGTTTTCTTTTTGTGGAGTTCTCCTTCAAAAGCCATTCCCAAAAATTGCACATCTGTTGCAAATGTTCGGTGCTCTATTGGCTGCAATTGGTGTCTGCATTATGGGAAGTCCTCTACTCCATCCAAACCTGACTTGGATCCGTTGGCTGGCGTGTGGCCTCATCTTGCCAGCCTTTATTACATCATTCAAGTGA

Protein sequence

MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQFGNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK*
Homology
[Close]
BLAST of MELO3C005175 vs. TrEMBL
Match: A0A0A0KQ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.8e-63
Identity = 126/164 (76.83%), Postives = 136/164 (82.93%), Query Frame = 1 

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60
           MAET PHEISLDMN+L S I AVTNRNPGISSCTWG AASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFVSSNFQAILGLFLNLPP--SPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLL 120
           GNTF+S  FQAI+GLFL+L P  S P  S L   VMLT+F+FS+ GV+LQKPFPK A LL
Sbjct: 61  GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120

Query: 121 QMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
           Q FGAL AAIG CI+GS LL+PN TWI WLA GLILPAFI SFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164

[Close]
BLAST of MELO3C005175 vs. TrEMBL
Match: A0A0A0KJN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-30
Identity = 78/165 (47.27%), Postives = 98/165 (59.39%), Query Frame = 1 

Query: 3   ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62
           E+   +IS+DMN LYS IT++  RNP I+           LPI I MQ  SP NS +   
Sbjct: 2   ESSSQQISIDMNHLYSLITSINERNPEING----------LPICIIMQTASPANSSKTEN 61

Query: 63  -FGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122
             G T +   FQA+L LF+    S PPL + L G  +L +F  SF GV LQ  FP+IA L
Sbjct: 62  NVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALL 121

Query: 123 LQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
            +  GAL+AAIGVCI+ S L+H N  WI WLACG  L AF+ SF+
Sbjct: 122 FEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

[Close]
BLAST of MELO3C005175 vs. TrEMBL
Match: A0A0A0KJP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-24
Identity = 66/168 (39.29%), Postives = 93/168 (55.36%), Query Frame = 1 

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPV---NS 60
           MA T  H+ SLDM+   SFI  ++ RN G+  C      S+CLP++I+MQ+       +S
Sbjct: 1   MASTS-HQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSS 60

Query: 61  PQFGNTFVSSNFQAILGLFLNLPPSPPP--LSELIGTVMLTAFVFSFCGVLLQKPFPKIA 120
            + G   +S +FQA+L LF++ PP+ PP  L       +  +F  SF  + L   FP+ A
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 HLLQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 163
           HL +  GAL +A GVC + S LL H N  WI W+AC   +  F  SFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

[Close]
BLAST of MELO3C005175 vs. TrEMBL
Match: A0A061EGV0_THECC (Ileal sodium/bile acid cotransporter, putative OS=Theobroma cacao GN=TCM_011398 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-13
Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 1 

Query: 22  AVTNRNPGISSCTWGTAASDCLPIYI-----KMQRPSPVNSPQFGNTFVSSNFQAILGLF 81
           A+T      +S  W + A DC+P+ I     +MQ   P      G T +S +FQ ++ L 
Sbjct: 59  AITRMRFYTASYQWRSQALDCIPLSINSLEIEMQSYQPRPPVSLGKTILSLSFQIVVALA 118

Query: 82  LNLPPSPP----PLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAAIGVCI 141
           L+          P+ +++   M+ AF  SF G+ L+  +PK+A++++  G+L+AA+G  I
Sbjct: 119 LSSSMGQTHHVLPI-DIVKISMIMAFAASFSGIFLRSSYPKMANIIENIGSLIAAVGFFI 178

Query: 142 MGSPLLHPNLTWIRWLACGLILPAFITS 161
           M S  L  NL W+ WLAC   L AF +S
Sbjct: 179 MTSIFLPGNLYWVTWLACAFSLLAFFSS 205

[Close]
BLAST of MELO3C005175 vs. NCBI nr
Match: gi|700194629|gb|KGN49806.1| (hypothetical protein Csa_5G136900 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 8.4e-63
Identity = 126/164 (76.83%), Postives = 136/164 (82.93%), Query Frame = 1 

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60
           MAET PHEISLDMN+L S I AVTNRNPGISSCTWG AASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFVSSNFQAILGLFLNLPP--SPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLL 120
           GNTF+S  FQAI+GLFL+L P  S P  S L   VMLT+F+FS+ GV+LQKPFPK A LL
Sbjct: 61  GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120

Query: 121 QMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
           Q FGAL AAIG CI+GS LL+PN TWI WLA GLILPAFI SFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164

[Close]
BLAST of MELO3C005175 vs. NCBI nr
Match: gi|700194626|gb|KGN49803.1| (hypothetical protein Csa_5G136870 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 4.2e-30
Identity = 78/165 (47.27%), Postives = 98/165 (59.39%), Query Frame = 1 

Query: 3   ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62
           E+   +IS+DMN LYS IT++  RNP I+           LPI I MQ  SP NS +   
Sbjct: 2   ESSSQQISIDMNHLYSLITSINERNPEING----------LPICIIMQTASPANSSKTEN 61

Query: 63  -FGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122
             G T +   FQA+L LF+    S PPL + L G  +L +F  SF GV LQ  FP+IA L
Sbjct: 62  NVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALL 121

Query: 123 LQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
            +  GAL+AAIGVCI+ S L+H N  WI WLACG  L AF+ SF+
Sbjct: 122 FEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

[Close]
BLAST of MELO3C005175 vs. NCBI nr
Match: gi|700194631|gb|KGN49808.1| (hypothetical protein Csa_5G137410 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 7.7e-24
Identity = 66/168 (39.29%), Postives = 93/168 (55.36%), Query Frame = 1 

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPV---NS 60
           MA T  H+ SLDM+   SFI  ++ RN G+  C      S+CLP++I+MQ+       +S
Sbjct: 1   MASTS-HQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSS 60

Query: 61  PQFGNTFVSSNFQAILGLFLNLPPSPPP--LSELIGTVMLTAFVFSFCGVLLQKPFPKIA 120
            + G   +S +FQA+L LF++ PP+ PP  L       +  +F  SF  + L   FP+ A
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 HLLQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 163
           HL +  GAL +A GVC + S LL H N  WI W+AC   +  F  SFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

[Close]
BLAST of MELO3C005175 vs. NCBI nr
Match: gi|590698393|ref|XP_007045702.1| (Ileal sodium/bile acid cotransporter, putative [Theobroma cacao])

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13
Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 1 

Query: 22  AVTNRNPGISSCTWGTAASDCLPIYI-----KMQRPSPVNSPQFGNTFVSSNFQAILGLF 81
           A+T      +S  W + A DC+P+ I     +MQ   P      G T +S +FQ ++ L 
Sbjct: 59  AITRMRFYTASYQWRSQALDCIPLSINSLEIEMQSYQPRPPVSLGKTILSLSFQIVVALA 118

Query: 82  LNLPPSPP----PLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAAIGVCI 141
           L+          P+ +++   M+ AF  SF G+ L+  +PK+A++++  G+L+AA+G  I
Sbjct: 119 LSSSMGQTHHVLPI-DIVKISMIMAFAASFSGIFLRSSYPKMANIIENIGSLIAAVGFFI 178

Query: 142 MGSPLLHPNLTWIRWLACGLILPAFITS 161
           M S  L  NL W+ WLAC   L AF +S
Sbjct: 179 MTSIFLPGNLYWVTWLACAFSLLAFFSS 205

The following BLAST results are available for this feature:
BLAST of MELO3C005175 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ03_CUCSA5.8e-6376.83Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136900 PE=4 SV=1[more]
A0A0A0KJN8_CUCSA2.9e-3047.27Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136870 PE=4 SV=1[more]
A0A0A0KJP2_CUCSA5.3e-2439.29Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137410 PE=4 SV=1[more]
A0A061EGV0_THECC1.9e-1333.78Ileal sodium/bile acid cotransporter, putative OS=Theobroma cacao GN=TCM_011398 ... [more]
BLAST of MELO3C005175 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194629|gb|KGN49806.1|8.4e-6376.83hypothetical protein Csa_5G136900 [Cucumis sativus][more]
gi|700194626|gb|KGN49803.1|4.2e-3047.27hypothetical protein Csa_5G136870 [Cucumis sativus][more]
gi|700194631|gb|KGN49808.1|7.7e-2439.29hypothetical protein Csa_5G137410 [Cucumis sativus][more]
gi|590698393|ref|XP_007045702.1|2.7e-1333.78Ileal sodium/bile acid cotransporter, putative [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU53495melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005175T1MELO3C005175T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU53495MU53495transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005175Cla97C01G007730Watermelon (97103) v2mewmbB009
MELO3C005175Bhi12G000922Wax gourdmewgoB012
MELO3C005175Cucsa.374360Cucumber (Gy14) v1cgymeB607
MELO3C005175CmaCh15G008430Cucurbita maxima (Rimu)cmameB252
MELO3C005175CmoCh15G008750Cucurbita moschata (Rifu)cmomeB240
MELO3C005175CsGy5G012670Cucumber (Gy14) v2cgybmeB302
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005175Cucurbita maxima (Rimu)cmameB635
MELO3C005175Cucurbita moschata (Rifu)cmomeB625
MELO3C005175Wild cucumber (PI 183967)cpimeB352
MELO3C005175Cucumber (Chinese Long) v2cumeB362
MELO3C005175Watermelon (Charleston Gray)mewcgB019
MELO3C005175Watermelon (97103) v1mewmB030
MELO3C005175Cucurbita pepo (Zucchini)cpemeB157
MELO3C005175Cucurbita pepo (Zucchini)cpemeB359
MELO3C005175Bottle gourd (USVL1VR-Ls)lsimeB013
MELO3C005175Silver-seed gourdcarmeB0483
MELO3C005175Silver-seed gourdcarmeB0821
MELO3C005175Cucumber (Chinese Long) v3cucmeB361