Cucsa.364660 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.364660
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionFerredoxin family protein
Locationscaffold03611 : 2061602 .. 2063477 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTCTTCGTTTGGAGTTTGTTCTTAAGAAAGGAAAGAAAAGGATAGACAGTGACAAACAAACACGTACTTCTCTTTTGTTCTCTTCCCTTCTTTTCTCTCTTCTTCCAGCGCCGTTTAGGGCTTCCACTTTCCATCTCCATTTCCTTCAGATCCCTCTCTCCCTCTCTCTCCCTTCGTAAGATCACTTCTCTCTCCTTTTCATTCCTTCTTTCTCTAAGTTTTCGCTCTTTTTTTTTCTTCTTACGCTTTATGTTCTCTTTCTTTGCTTCTTTACTGGATCAACCTTTCTTGCGTATTTAATGCTCTTGATTTTTCTTTTATATTTCACCTATTGATTTCTCTTGATTTGTTTTCTCTTTCTTTCCTTTCGTTTATTCCACCTATTGTCTTGGAAGCTCCGCTGATGATGAATGAATGAACGCTTCACACTAGTGATTCTTTTTTTTTTTTCCTTTTCGTTTTTTCAATTTTTGAATTGTTCGAGGTTTTGGTTGTTGTTGCTCTGATGATATGATATGATATGATATGATATTCACGAGGTCTGATGCTTCTGTTGTCATTTTATCGCCTTGCATGCTTGTTGAGTCTTCTTTCCATTCCATATGAACTATTGGTGGTGATTTTGTTTAAGTTGTTCTGTTTTCTTTGCGGGACGACGGTGTGAAAAATGTTTAGGAATTAGGATCTGGTCCGTTTTTTATTTTTATTTCTTTACTGTTACTTCCTTTTGTGCTGCTCAGATTGTTTGTTGTGGATTGAACAATCGATAAACTAGTGTATTCTTTTCATTTGCTCAATAAAAGAAACATTTATCCGTTATTTCAAAAACTTTGAGGTATCCTTTTTTCTGTTTCCTTTCAACTTTTGTGGTATCGAACTATTGTAGGTTTGATTTACTAACCTCGAACGTATTTTTGCATTACTGGTTCATCGGTGCGACCAACATAACATGTCTTTCTTATTGTGATGAACTAACTTAGTTTTAATGAAATAGTTTTTTCCGTTAAGAATGAAATGTTATTGAAACTTTCCATATCTTATTCATCATCTGGAAGACTGGAACTATCTCATATCCTCCAATTGTCTTTTTTCATCAATTGCTGGTGTGAGCGTAGCTGATGAATGTGCAATATTTTGACGCTATGATATGAAATATCATGAATGATATTTAGTAGACAAGATCTTTTATCATCGATTTCTGCTTGAATGTTTTCATTTTGGAATTTTAACTTGTACGTATGGTTTCCAACTTTGCAGTGACAAGTAGATAAGGTTGCCGTGTAATTGTGTGATTAATTAACTTTGATCTTCTGTTGTCTAATAGATTTTTGCAAATTTCTGTCAAATTCTCTATTCTTAGTCCCTTCGAGGACATTCGATGAGTCTCTATTTTTATTTTCAGGTATTACTATTCTATTCAGAACATGTCGACTGTCACACTCCCAACATCTTCCCTGATCAAACCTCCTACACTAAGGAGATCCAATGCCCTGGTGCAGAGGCCATCTTCTTTGTGTTCCTTTAGGAGCGTATCCCGATCATTTGGGTTGAAGTCTTCTCAGTTCAAAGTGTCAGCGATGGCTTCTTACAAAGTAAAATTAATTGGACCAGACGGTGAAGAGAATGAGTTTGACGCCCCTGATGATGCTTACATTCTCGACTCAGCTGAGAATGCTGGATTGGACCTACCGTACTCTTGCAGGGCCGGGGCTTGCTCTACTTGTGCCGGTCAAGTAGTGTCCGGGACAGTGGACCAGACAGATGGATCGTTCTTGGACGACAAGCAGATGGAGAAGGGGTATGTCCTGACCTGCGTCGCATATCCACAATCCGATTGCGTGATCCACACACACAAGGAAGGTGATTTGTATTAA

mRNA sequence

TCGTCTTCGTTTGGAGTTTGTTCTTAAGAAAGGAAAGAAAAGGATAGACAGTGACAAACAAACACGTActtctcttttgttctcttcccttcttttctctcttcttcCAGCGCCGTTTAGGGCTTCCActttccatctccatttccttcagatccctctctccctctctctcccttcGTATTACTATTCTATTCAGAACATGTCGACTGTCACACTCCCAACATCTTCCCTGATCAAACCTCCTACACTAAGGAGATCCAATGCCCTGGTGCAGAGGCCATCTTCTTTGTGTTCCTTTAGGAGCGTATCCCGATCATTTGGGTTGAAGTCTTCTCAGTTCAAAGTGTCAGCGATGGCTTCTTACAAAGTAAAATTAATTGGACCAGACGGTGAAGAGAATGAGTTTGACGCCCCTGATGATGCTTACATTCTCGACTCAGCTGAGAATGCTGGATTGGACCTACCGTACTCTTGCAGGGCCGGGGCTTGCTCTACTTGTGCCGGTCAAGTAGTGTCCGGGACAGTGGACCAGACAGATGGATCGTTCTTGGACGACAAGCAGATGGAGAAGGGGTATGTCCTGACCTGCGTCGCATATCCACAATCCGATTGCGTGATCCACACACACAAGGAAGGTGATTTGTATTAA

Coding sequence (CDS)

TCGTCTTCGTTTGGAGTTTGTTCTTAAGAAAGGAAAGAAAAGGATAGACAGTGACAAACAAACACGTACTTCTCTTTTGTTCTCTTCCCTTCTTTTCTCTCTTCTTCCAGCGCCGTTTAGGGCTTCCACTTTCCATCTCCATTTCCTTCAGATCCCTCTCTCCCTCTCTCTCCCTTCGTATTACTATTCTATTCAGAACATGTCGACTGTCACACTCCCAACATCTTCCCTGATCAAACCTCCTACACTAAGGAGATCCAATGCCCTGGTGCAGAGGCCATCTTCTTTGTGTTCCTTTAGGAGCGTATCCCGATCATTTGGGTTGAAGTCTTCTCAGTTCAAAGTGTCAGCGATGGCTTCTTACAAAGTAAAATTAATTGGACCAGACGGTGAAGAGAATGAGTTTGACGCCCCTGATGATGCTTACATTCTCGACTCAGCTGAGAATGCTGGATTGGACCTACCGTACTCTTGCAGGGCCGGGGCTTGCTCTACTTGTGCCGGTCAAGTAGTGTCCGGGACAGTGGACCAGACAGATGGATCGTTCTTGGACGACAAGCAGATGGAGAAGGGGTATGTCCTGACCTGCGTCGCATATCCACAATCCGATTGCGTGATCCACACACACAAGGAAGGTGATTTGTATTAA

Protein sequence

RLRLEFVLKKGKKRIDSDKQTRTSLLFSSLLFSLLPAPFRASTFHLHFLQIPLSLSLPSYYYSIQNMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY*
Homology
[Close]
BLAST of Cucsa.364660 vs. Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 101/152 (66.45%), Postives = 121/152 (79.61%), Query Frame = 1 

Query: 67  MSTVTLPTSSLI--KPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQ-FKVSAMASYKV 126
           MST T  TS  +     T + S   V+ PSSL  F  V++   LK+S+   VSAMA YKV
Sbjct: 1   MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKV 60

Query: 127 KLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFL 186
           KL+GP+GEE+EFDAPDDAYILD+AE AG++LPYSCRAGACSTCAG++ SG+VDQ+DGSFL
Sbjct: 61  KLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFL 120

Query: 187 DDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           DD Q E+GYVLTCV+YP+SDCVIHTHKEGDLY
Sbjct: 121 DDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY 152

[Close]
BLAST of Cucsa.364660 vs. Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46
Identity = 96/155 (61.94%), Postives = 118/155 (76.13%), Query Frame = 1 

Query: 67  MSTVTLPTSSLIKPPTLRRS-NALVQRPS---SLCSFRSVSRSFGLKSSQFKVSAMAS-- 126
           M+TV + ++S+ K     ++ N L+   S   S+ S + VSRSFGLK S     A  S  
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 127 YKVKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDG 186
           YKVKL+GPDG+E+EF+  DD YILD+AE AG+DLPYSCRAGACSTCAGQ+VSG VDQ+DG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 187 SFLDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           SFL+D  +EKGYVLTCVAYPQSDCVIHTHKE +L+
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]
BLAST of Cucsa.364660 vs. Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-40
Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 119 ASYKVKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQT 178
           A YKVKLIGPDG+ENEFD PDD YILD+AE AG+DLPYSCRAGACSTCAG++  G VDQ+
Sbjct: 2   AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQS 61

Query: 179 DGSFLDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           DGSFL+D   EKGYVLTCVAYPQSD VIHTHKE +L+
Sbjct: 62  DGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98

[Close]
BLAST of Cucsa.364660 vs. Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.7e-40
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 119 ASYKVKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQT 178
           A YKVKLIGP+GEENEF+  DD +ILD+AE AG+DLPYSCRAGACSTCAGQ+V G VDQ+
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 179 DGSFLDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           +GSFL+D   EKG+VLTCVAYPQSDCVIHTHKE +L+
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98

[Close]
BLAST of Cucsa.364660 vs. Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 75/118 (63.56%), Postives = 100/118 (84.75%), Query Frame = 1 

Query: 100 RSVSRSFGLK-SSQFKVSAMAS-YKVKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYS 159
           R  +R+ G + SS+F  SA A  +KVKL+GPDG E+EF+APDD YIL++AE AG++LP+S
Sbjct: 38  RQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFS 97

Query: 160 CRAGACSTCAGQVVSGTVDQTDGSFLDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           CRAG+CSTCAG++ +G VDQ++GSFLDD QM +GY+LTC++YP++DCVIHTHKE DLY
Sbjct: 98  CRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDLY 155

[Close]
BLAST of Cucsa.364660 vs. TrEMBL
Match: A0A0A0KNA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G413260 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.5e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

Query: 67  MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 126
           MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI
Sbjct: 1   MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 60

Query: 127 GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 186
           GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK
Sbjct: 61  GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 120

Query: 187 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           QMEKGYVLTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]
BLAST of Cucsa.364660 vs. TrEMBL
Match: D7SSE8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0147g00110 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = 1 

Query: 66  NMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKL 125
           NMSTV+LPT  L K   L++S AL++ P SL S RS S++FGLKSS F+VSAMA YKVKL
Sbjct: 19  NMSTVSLPTPFLFKSAPLKKSCALIRSPGSLGSVRSTSKAFGLKSSSFRVSAMAVYKVKL 78

Query: 126 IGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 185
           IGPDGEE+EFDAPDD YILDSAENAGL+LPYSCRAGACSTCAGQ+V G+VDQ+DGSFLD+
Sbjct: 79  IGPDGEESEFDAPDDVYILDSAENAGLELPYSCRAGACSTCAGQMVLGSVDQSDGSFLDE 138

Query: 186 KQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           KQM+ GYVLTCV+YP SD VIHTHKEGDLY
Sbjct: 139 KQMDNGYVLTCVSYPTSDSVIHTHKEGDLY 168

[Close]
BLAST of Cucsa.364660 vs. TrEMBL
Match: V4U9R4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016676mg PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.8e-58
Identity = 112/150 (74.67%), Postives = 129/150 (86.00%), Query Frame = 1 

Query: 66  NMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKL 125
           NMSTV LPTS L +     +  +LV+ P SL S RSVS++FGLK S FK SAMA YKVKL
Sbjct: 64  NMSTVRLPTSCLFQAAPRSKKFSLVKSPGSLGSTRSVSKAFGLKCSSFKASAMAVYKVKL 123

Query: 126 IGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 185
           IGP+GEENEFDAPDDAYI+DSAE+ G++LPYSCRAGACSTCAGQ+VSG+VDQ+DGSFLDD
Sbjct: 124 IGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDD 183

Query: 186 KQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           KQMEKG+VLTCVAYP SDCVI+THKE +LY
Sbjct: 184 KQMEKGFVLTCVAYPTSDCVIYTHKESELY 213

[Close]
BLAST of Cucsa.364660 vs. TrEMBL
Match: C6T265_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G110800 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 114/152 (75.00%), Postives = 129/152 (84.87%), Query Frame = 1 

Query: 63  SIQNMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYK 122
           S  NMST+ LP +SL      RRS AL + PSSL S ++VS+ FGLKSS F+VSAMA YK
Sbjct: 2   SAVNMSTMRLPRASLSGTTPARRSCALTKSPSSLRSVKNVSKVFGLKSSSFRVSAMAVYK 61

Query: 123 VKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSF 182
           VKLIGPDGEENEF+APDD YILDSAENAG++LPYSCRAGACSTCAGQVVSG+VDQ D SF
Sbjct: 62  VKLIGPDGEENEFEAPDDTYILDSAENAGVELPYSCRAGACSTCAGQVVSGSVDQADQSF 121

Query: 183 LDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDL 215
           LDD Q+EKGY+LTCV+YP+SDCVIHTHKE DL
Sbjct: 122 LDDHQIEKGYLLTCVSYPKSDCVIHTHKEEDL 153

[Close]
BLAST of Cucsa.364660 vs. TrEMBL
Match: A0A0B2PPY0_GLYSO (Ferredoxin-3, chloroplastic OS=Glycine soja GN=glysoja_015356 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 114/152 (75.00%), Postives = 129/152 (84.87%), Query Frame = 1 

Query: 63  SIQNMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYK 122
           S  NMST+ LP +SL      RRS AL + PSSL S ++VS+ FGLKSS F+VSAMA YK
Sbjct: 2   SAVNMSTMRLPRASLSGTTPARRSCALTKSPSSLRSVKNVSKVFGLKSSSFRVSAMAVYK 61

Query: 123 VKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSF 182
           VKLIGPDGEENEF+APDD YILDSAENAG++LPYSCRAGACSTCAGQVVSG+VDQ D SF
Sbjct: 62  VKLIGPDGEENEFEAPDDTYILDSAENAGVELPYSCRAGACSTCAGQVVSGSVDQADQSF 121

Query: 183 LDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDL 215
           LDD Q+EKGY+LTCV+YP+SDCVIHTHKE DL
Sbjct: 122 LDDHQIEKGYLLTCVSYPKSDCVIHTHKEEDL 153

[Close]
BLAST of Cucsa.364660 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-47
Identity = 96/155 (61.94%), Postives = 118/155 (76.13%), Query Frame = 1 

Query: 67  MSTVTLPTSSLIKPPTLRRS-NALVQRPS---SLCSFRSVSRSFGLKSSQFKVSAMAS-- 126
           M+TV + ++S+ K     ++ N L+   S   S+ S + VSRSFGLK S     A  S  
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 127 YKVKLIGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDG 186
           YKVKL+GPDG+E+EF+  DD YILD+AE AG+DLPYSCRAGACSTCAGQ+VSG VDQ+DG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 187 SFLDDKQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           SFL+D  +EKGYVLTCVAYPQSDCVIHTHKE +L+
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]
BLAST of Cucsa.364660 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 157.5 bits (397), Expect = 9.1e-39
Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = 1 

Query: 71  TLPTSSLIKPPTLRRSNALVQRPSSLCS--FRSVSRSFGLKSSQFK---VSAMASYKVKL 130
           T  +S+++    LRR     Q P SL S  F +    FGLKSS  +   V+AMA+YKVK 
Sbjct: 4   TALSSAIVSTSFLRRQ----QTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKF 63

Query: 131 IGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 190
           I P+GE+ E +  +D Y+LD+AE AGLDLPYSCRAG+CS+CAG+VVSG++DQ+D SFLDD
Sbjct: 64  ITPEGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD 123

Query: 191 KQMEKGYVLTCVAYPQSDCVIHTHKE 212
           +QM +GYVLTCVAYP SD VI THKE
Sbjct: 124 EQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]
BLAST of Cucsa.364660 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-36
Identity = 82/149 (55.03%), Postives = 106/149 (71.14%), Query Frame = 1 

Query: 71  TLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRS--FGLKSSQFK---VSAMASYKVKL 130
           T  +S+++    +RRS A    P SL S  S +    FGLKS   +   V+AMA+YKVK 
Sbjct: 4   TALSSAIVGTSFIRRSPA----PISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKF 63

Query: 131 IGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 190
           I P+GE  E +  DD Y+LD+AE AG+DLPYSCRAG+CS+CAG+VVSG+VDQ+D SFLDD
Sbjct: 64  ITPEGEL-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDD 123

Query: 191 KQMEKGYVLTCVAYPQSDCVIHTHKEGDL 215
           +Q+ +G+VLTC AYP SD  I THKE D+
Sbjct: 124 EQIGEGFVLTCAAYPTSDVTIETHKEEDI 147

[Close]
BLAST of Cucsa.364660 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 74/146 (50.68%), Postives = 102/146 (69.86%), Query Frame = 1 

Query: 72  LPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQF---KVSAMASYKVKLIGP 131
           L +S +IK P + R   +    + L +  + +  FGL SS+    KV A  S KVKLI P
Sbjct: 5   LYSSYIIKIPVISR---ISPSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISP 64

Query: 132 DGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDKQM 191
           +GEE E +  +D  IL+SAENAGL+LPYSCR+G C TC G++VSG VDQ+ GSFL+++Q+
Sbjct: 65  EGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQI 124

Query: 192 EKGYVLTCVAYPQSDCVIHTHKEGDL 215
           +KGY+LTC+A P  DCV++THK+ DL
Sbjct: 125 QKGYILTCIALPLEDCVVYTHKQSDL 147

[Close]
BLAST of Cucsa.364660 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.4e-17
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 1 

Query: 68  STVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLIG 127
           ST++LP   L    +    NA +   ++  +F +  R               +YKV ++ 
Sbjct: 11  STISLPKPYLSNSFSFPLRNATLSTTTNRRNFLTTGRIIA-----------RAYKV-VVE 70

Query: 128 PDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDKQ 187
            DG+  E +   D  IL  A ++GLD+PY C  G C TC  ++V+GTVDQ+ G  L D  
Sbjct: 71  HDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSDDV 130

Query: 188 MEKGYVLTCVAYPQSDCVIHTHKEGDL 215
           +E+GY L C +YP SDC I    E +L
Sbjct: 131 VERGYTLLCASYPTSDCHIKMIPEEEL 144

[Close]
BLAST of Cucsa.364660 vs. NCBI nr
Match: gi|778702570|ref|XP_011655228.1| (PREDICTED: ferredoxin, root R-B1-like [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 5.0e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

Query: 67  MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 126
           MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI
Sbjct: 1   MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 60

Query: 127 GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 186
           GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK
Sbjct: 61  GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 120

Query: 187 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           QMEKGYVLTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]
BLAST of Cucsa.364660 vs. NCBI nr
Match: gi|659113488|ref|XP_008456600.1| (PREDICTED: ferredoxin, root R-B2-like [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 6.3e-74
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 

Query: 67  MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 126
           MSTV LPTS LIK PTLRRSNALVQRPSSLCSFRSVS+SFGLKSSQ KVSAMASYKVKLI
Sbjct: 1   MSTVILPTSCLIKTPTLRRSNALVQRPSSLCSFRSVSQSFGLKSSQSKVSAMASYKVKLI 60

Query: 127 GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 186
           GP+GEENEF+APDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK
Sbjct: 61  GPNGEENEFEAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 120

Query: 187 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           QME+GYVLTCVAYPQSDCVIHTHKEGDLY
Sbjct: 121 QMEQGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]
BLAST of Cucsa.364660 vs. NCBI nr
Match: gi|296080982|emb|CBI18580.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 237.7 bits (605), Expect = 2.0e-59
Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = 1 

Query: 66  NMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKL 125
           NMSTV+LPT  L K   L++S AL++ P SL S RS S++FGLKSS F+VSAMA YKVKL
Sbjct: 19  NMSTVSLPTPFLFKSAPLKKSCALIRSPGSLGSVRSTSKAFGLKSSSFRVSAMAVYKVKL 78

Query: 126 IGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 185
           IGPDGEE+EFDAPDD YILDSAENAGL+LPYSCRAGACSTCAGQ+V G+VDQ+DGSFLD+
Sbjct: 79  IGPDGEESEFDAPDDVYILDSAENAGLELPYSCRAGACSTCAGQMVLGSVDQSDGSFLDE 138

Query: 186 KQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           KQM+ GYVLTCV+YP SD VIHTHKEGDLY
Sbjct: 139 KQMDNGYVLTCVSYPTSDSVIHTHKEGDLY 168

[Close]
BLAST of Cucsa.364660 vs. NCBI nr
Match: gi|731413612|ref|XP_010658808.1| (PREDICTED: ferredoxin, root R-B1-like [Vitis vinifera])

HSP 1 Score: 235.3 bits (599), Expect = 9.7e-59
Identity = 114/149 (76.51%), Postives = 130/149 (87.25%), Query Frame = 1 

Query: 67  MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 126
           MSTV+LPT  L K   L++S AL++ P SL S RS S++FGLKSS F+VSAMA YKVKLI
Sbjct: 1   MSTVSLPTPFLFKSAPLKKSCALIRSPGSLGSVRSTSKAFGLKSSSFRVSAMAVYKVKLI 60

Query: 127 GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 186
           GPDGEE+EFDAPDD YILDSAENAGL+LPYSCRAGACSTCAGQ+V G+VDQ+DGSFLD+K
Sbjct: 61  GPDGEESEFDAPDDVYILDSAENAGLELPYSCRAGACSTCAGQMVLGSVDQSDGSFLDEK 120

Query: 187 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           QM+ GYVLTCV+YP SD VIHTHKEGDLY
Sbjct: 121 QMDNGYVLTCVSYPTSDSVIHTHKEGDLY 149

[Close]
BLAST of Cucsa.364660 vs. NCBI nr
Match: gi|567906835|ref|XP_006445731.1| (hypothetical protein CICLE_v10016676mg [Citrus clementina])

HSP 1 Score: 231.5 bits (589), Expect = 1.4e-57
Identity = 112/150 (74.67%), Postives = 129/150 (86.00%), Query Frame = 1 

Query: 66  NMSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKL 125
           NMSTV LPTS L +     +  +LV+ P SL S RSVS++FGLK S FK SAMA YKVKL
Sbjct: 64  NMSTVRLPTSCLFQAAPRSKKFSLVKSPGSLGSTRSVSKAFGLKCSSFKASAMAVYKVKL 123

Query: 126 IGPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDD 185
           IGP+GEENEFDAPDDAYI+DSAE+ G++LPYSCRAGACSTCAGQ+VSG+VDQ+DGSFLDD
Sbjct: 124 IGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDD 183

Query: 186 KQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 216
           KQMEKG+VLTCVAYP SDCVI+THKE +LY
Sbjct: 184 KQMEKGFVLTCVAYPTSDCVIYTHKESELY 213

The following BLAST results are available for this feature:
BLAST of Cucsa.364660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FER3_MAIZE1.7e-5066.45Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1[more]
FER3_ARATH4.2e-4661.94Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1[more]
FER1_RAPSA2.0e-4078.35Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1[more]
FER2_RAPSA7.7e-4076.29Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1[more]
FER6_MAIZE1.1e-3863.56Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1[more]
BLAST of Cucsa.364660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNA3_CUCSA3.5e-79100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G413260 PE=4 SV=1[more]
D7SSE8_VITVI1.4e-5976.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0147g00110 PE=4 SV=... [more]
V4U9R4_9ROSI9.8e-5874.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016676mg PE=4 SV=1[more]
C6T265_SOYBN2.8e-5775.00Uncharacterized protein OS=Glycine max GN=GLYMA_20G110800 PE=2 SV=1[more]
A0A0B2PPY0_GLYSO2.8e-5775.00Ferredoxin-3, chloroplastic OS=Glycine soja GN=glysoja_015356 PE=4 SV=1[more]
BLAST of Cucsa.364660 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27510.12.4e-4761.94 ferredoxin 3[more]
AT1G10960.19.1e-3958.22 ferredoxin 1[more]
AT1G60950.12.5e-3655.03 2Fe-2S ferredoxin-like superfamily protein[more]
AT5G10000.11.0e-3450.68 ferredoxin 4[more]
AT4G14890.13.4e-1734.69 2Fe-2S ferredoxin-like superfamily protein[more]
BLAST of Cucsa.364660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702570|ref|XP_011655228.1|5.0e-79100.00PREDICTED: ferredoxin, root R-B1-like [Cucumis sativus][more]
gi|659113488|ref|XP_008456600.1|6.3e-7494.63PREDICTED: ferredoxin, root R-B2-like [Cucumis melo][more]
gi|296080982|emb|CBI18580.3|2.0e-5976.67unnamed protein product [Vitis vinifera][more]
gi|731413612|ref|XP_010658808.1|9.7e-5976.51PREDICTED: ferredoxin, root R-B1-like [Vitis vinifera][more]
gi|567906835|ref|XP_006445731.1|1.4e-5774.67hypothetical protein CICLE_v10016676mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR010241Fd_pln
IPR012675Beta-grasp_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.364660.1Cucsa.364660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 128..201
score: 1.0
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROFILEPS510852FE2S_FER_2coord: 121..212
score: 12
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 104..211
score: 2.55
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 158..166
scor
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMsTIGR02008TIGR02008coord: 119..215
score: 1.2
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 118..215
score: 1.4
NoneNo IPR availablePANTHERPTHR19370NADH-CYTOCHROME B5 REDUCTASEcoord: 60..215
score: 1.5
NoneNo IPR availablePANTHERPTHR19370:SF124FERREDOXIN-4, CHLOROPLASTIC-RELATEDcoord: 60..215
score: 1.5