Bhi04G001324 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001324
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ferredoxin
Location	chr4 : 41771988 .. 41774360 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAAAAAGCCTAAGGTTGGGAGGGAGAGAGTAACCAATAGCCAAAAGGTTCTAGCAATTTTCCAAAAAGATTTAAAATAGAAACGGGAGTAGAGAATCGATAACTTGGTTCACCAACTCAAGCGTCCCCATTTGGAGTCTATTCTCAAGAAAGGAAAAGACAGTGACAAACAAACACGTACTTACCATCTTCTTCTCTATTCTTCCAGCGGCGTTTAGGGCTTTCATTTCCATTTCTGCAGATCCTCTCTCCTCGTTCGTAAGATCCCTCTCTCTCTCTCTCCATTTCTTTTCATTATCGTCTTTCTTCGATCCTTTCTGTTTACGATTGTCCTTTTCACTGTTTCTGTAAGTTTTCTTTTCGATTTTCTTGTTATTCACTGTTTATTTTTGTGGATCGTTGGATGATTCTTACGGTTTATGTTGTATTTGTTTTGGTTGAATAGTGGATCAAGCTTTTCGGCTTTTACATACTGTTGATTTCTGATGATTTGTTTGTTTGTTTATTTGTTTATTCGTTTATTGCACCTATTGTGTTGGAATCTCTGCTGATGAATGAACGCTTGACATTAGAGAATGTTTGGTTGTTGTTGCTACTATATTCAGGACGATTGATTCTTTTTTCCTTATTTTCTGGAAGCCTGATGGTTCTGTTATCATTTTATCGCGTTGCATGCTAGATAATTTGTTTAGTTCTTCTTTCCATTCCAAATGAAGAGTTGCTGGTGATTTTGTAAAAGTTGTTCTGTTTGCTTTGCGGTATGGTGTGGAAATTGTTTAGGATGAGCTTGTTATGGATGTATTGTATGGTGTGGTAACTTCTCTTTGTGTTTGTTGAGCTTGTTATGGATGTATTGTTCTTTTCTTTTTTGAGTTAAGCAATTGCAGGTGGGATTGAACCATCGAGAGATTGGTGTAGTCTTTTCATTTGCTTTACAAAAACAAAAAGCATTTGTCATTATTTCAAAAACTTTGAGGTCTCGTCCTTTTTCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTATTTCACTTTTTTGGTATCAAACTATTATAGGTTTACTAACCTCAAACGTACTTTTGCATTACTGGCTCATCAGTTAGACCGACTATAATATGTCTTTCTTATTGTGGTCATGGAATAAACTAAGTTAGTTTTAATGAACTAGATTTTCGTTAAGAATGAAATCGAATCGAAACTTTCCATGTCCAATTCATCATCTGGAACTATCTCCTGTCCTCCAATGTCTTTTTTCATCATTTACTGGTGTTTGCGTGGATGAGCATAGCTGATGAATGTCCGACATCTTGATGCTTCTTATGTCATGAAATATTAGGAAAGATATTTTGCTGGAATGTCTTCATTTTGGAATTATAACATGTATACAATATGTATGGTTTCCAGTGAAGTAGATATTGTTGCTGTGTAATTAATTAGCAATGATCTTCTGTTGTCTAATAGATGGTTGTAAGTTTTCGCTGTTTAAAATCCCTATTTTTATTTCATGGATTTCAGCTATTACTATTCTATTCTGAACATGTTGACTATCAAACTCCCAACATCTTGCCTGATCAAAACTACTACACCAAGGAGATCCAATGCCCTGGTTCAGAGGCCATCTTCTTTGTGTTCTGTTAGGAGCGTATCCCGAGCATTTGGATTGAAGTCTTCTTCATTCAGAGTGTCAGCAATGGCTACTTACAAAGTGAAATTAATCGGACCCAATGGTGAAGAGAATGAGTTTGAGGCCCCTGATGATGCATACATTCTCGACTCAGCTGAGGATGCTGGATTGGATCTACCTTACTCTTGCAGGGCTGGGGCTTGCTCTACTTGTGCTGGTCAAGTAGTTTCTGGGACAGTAGATCAATCAGACGGATCATTCTTGGACGACAAGCAGATGGAGAAGGGGTATGTTCTGACCTGCGTCGCATATCCACAATCCGATTGTGTGATCCAGACGCACAAGGAAGGTGATTTGTACTAATTTCCTTGTTTGTGTGCATTTTGTCAGTTGAATCTGATTGAACTTCAATCATGCTACACTGTTTGTGACTTAGTTTTTGAGGTTGAATGTCTATTGCAATGCAAAAATTGTGCTTAGTACTACTGCGAATTTTAAGTTGCTGGTTTAGCTAAAGGCGAAGTATCGAACATCATTCATGAATAGTGGATATCTGTTTTAGTTTATGGTTAGCTACCAAGAGAAGATGTGAAAGTTCAATACCGACAATGGACGATAGAGGGGGTAATGCGTTGGTTATTATAGTATCAGATTATTAATTGAGTTATAATTGTTTGTGTTTGGGATATAAATTATTTTAGTTCGGG

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAAAAGCCTAAGGTTGGGAGGGAGAGAGTAACCAATAGCCAAAAGGTTCTAGCAATTTTCCAAAAAGATTTAAAATAGAAACGGGAGTAGAGAATCGATAACTTGGTTCACCAACTCAAGCGTCCCCATTTGGAGTCTATTCTCAAGAAAGGAAAAGACAGTGACAAACAAACACGTACTTACCATCTTCTTCTCTATTCTTCCAGCGGCGTTTAGGGCTTTCATTTCCATTTCTGCAGATCCTCTCTCCTCGTTCCTATTACTATTCTATTCTGAACATGTTGACTATCAAACTCCCAACATCTTGCCTGATCAAAACTACTACACCAAGGAGATCCAATGCCCTGGTTCAGAGGCCATCTTCTTTGTGTTCTGTTAGGAGCGTATCCCGAGCATTTGGATTGAAGTCTTCTTCATTCAGAGTGTCAGCAATGGCTACTTACAAAGTGAAATTAATCGGACCCAATGGTGAAGAGAATGAGTTTGAGGCCCCTGATGATGCATACATTCTCGACTCAGCTGAGGATGCTGGATTGGATCTACCTTACTCTTGCAGGGCTGGGGCTTGCTCTACTTGTGCTGGTCAAGTAGTTTCTGGGACAGTAGATCAATCAGACGGATCATTCTTGGACGACAAGCAGATGGAGAAGGGGTATGTTCTGACCTGCGTCGCATATCCACAATCCGATTGTGTGATCCAGACGCACAAGGAAGGTGATTTGTACTAATTTCCTTGTTTGTGTGCATTTTGTCAGTTGAATCTGATTGAACTTCAATCATGCTACACTGTTTGTGACTTAGTTTTTGAGGTTGAATGTCTATTGCAATGCAAAAATTGTGCTTAGTACTACTGCGAATTTTAAGTTGCTGGTTTAGCTAAAGGCGAAGTATCGAACATCATTCATGAATAGTGGATATCTGTTTTAGTTTATGGTTAGCTACCAAGAGAAGATGTGAAAGTTCAATACCGACAATGGACGATAGAGGGGGTAATGCGTTGGTTATTATAGTATCAGATTATTAATTGAGTTATAATTGTTTGTGTTTGGGATATAAATTATTTTAGTTCGGG

Coding sequence (CDS)

ATGTTGACTATCAAACTCCCAACATCTTGCCTGATCAAAACTACTACACCAAGGAGATCCAATGCCCTGGTTCAGAGGCCATCTTCTTTGTGTTCTGTTAGGAGCGTATCCCGAGCATTTGGATTGAAGTCTTCTTCATTCAGAGTGTCAGCAATGGCTACTTACAAAGTGAAATTAATCGGACCCAATGGTGAAGAGAATGAGTTTGAGGCCCCTGATGATGCATACATTCTCGACTCAGCTGAGGATGCTGGATTGGATCTACCTTACTCTTGCAGGGCTGGGGCTTGCTCTACTTGTGCTGGTCAAGTAGTTTCTGGGACAGTAGATCAATCAGACGGATCATTCTTGGACGACAAGCAGATGGAGAAGGGGTATGTTCTGACCTGCGTCGCATATCCACAATCCGATTGTGTGATCCAGACGCACAAGGAAGGTGATTTGTACTAA

Protein sequence

MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDKQMEKGYVLTCVAYPQSDCVIQTHKEGDLY

Homology

[Close]

BLAST of Bhi04G001324 vs. Swiss-Prot
Match: sp|P27788|FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-47
Identity = 98/152 (64.47%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 1   MLTIKLPTSCLI--KTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSS-SFRVSAMATYKV 60
           M T    TSC +     T + S   V+ PSSL     V++   LK+S    VSAMA YKV
Sbjct: 1   MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKV 60

Query: 61  KLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFL 120
           KL+GP GEE+EF+APDDAYILD+AE AG++LPYSCRAGACSTCAG++ SG+VDQSDGSFL
Sbjct: 61  KLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFL 120

Query: 121 DDKQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           DD Q E+GYVLTCV+YP+SDCVI THKEGDLY
Sbjct: 121 DDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY 152

[Close]

BLAST of Bhi04G001324 vs. Swiss-Prot
Match: sp|Q9ZQG8|FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-44
Identity = 93/155 (60.00%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTT-TPRRSNALVQRPS---SLCSVRSVSRAFGLKSS--SFRVSAMAT 60
           M T+++ ++ + K     + +N L+   S   S+ S + VSR+FGLK S  S   +  A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKVKLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDG 120
           YKVKL+GP+G+E+EFE  DD YILD+AE+AG+DLPYSCRAGACSTCAGQ+VSG VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDDKQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           SFL+D  +EKGYVLTCVAYPQSDCVI THKE +L+
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of Bhi04G001324 vs. Swiss-Prot
Match: sp|P14937|FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-40
Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 53  ATYKVKLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQS 112
           A YKVKLIGP GEENEFE  DD +ILD+AE+AG+DLPYSCRAGACSTCAGQ+V G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 113 DGSFLDDKQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           +GSFL+D   EKG+VLTCVAYPQSDCVI THKE +L+
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98

[Close]

BLAST of Bhi04G001324 vs. Swiss-Prot
Match: sp|P14936|FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-39
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 53  ATYKVKLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQS 112
           A YKVKLIGP+G+ENEF+ PDD YILD+AE+AG+DLPYSCRAGACSTCAG++  G VDQS
Sbjct: 2   AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQS 61

Query: 113 DGSFLDDKQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           DGSFL+D   EKGYVLTCVAYPQSD VI THKE +L+
Sbjct: 62  DGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98

[Close]

BLAST of Bhi04G001324 vs. Swiss-Prot
Match: sp|O04090|FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-38
Identity = 87/143 (60.84%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 8   TSCLIKTTTPRRSNALVQRPSSLCSV--RSVSRAFGLKSSSF---RVSAMATYKVKLIGP 67
           +S ++ T+  RR     Q P SL S+   +    FGLKSS+    RV+AMATYKVK I P
Sbjct: 7   SSAIVSTSFLRRQ----QTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITP 66

Query: 68  NGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDKQM 127
            GE+ E E  +D Y+LD+AE+AGLDLPYSCRAG+CS+CAG+VVSG++DQSD SFLDD+QM
Sbjct: 67  EGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 126

Query: 128 EKGYVLTCVAYPQSDCVIQTHKE 146
            +GYVLTCVAYP SD VI+THKE
Sbjct: 127 SEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of Bhi04G001324 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 180.6 bits (457), Expect = 6.9e-46
Identity = 93/155 (60.00%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTT-TPRRSNALVQRPS---SLCSVRSVSRAFGLKSS--SFRVSAMAT 60
           M T+++ ++ + K     + +N L+   S   S+ S + VSR+FGLK S  S   +  A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKVKLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDG 120
           YKVKL+GP+G+E+EFE  DD YILD+AE+AG+DLPYSCRAGACSTCAGQ+VSG VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDDKQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           SFL+D  +EKGYVLTCVAYPQSDCVI THKE +L+
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of Bhi04G001324 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-39
Identity = 87/143 (60.84%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 8   TSCLIKTTTPRRSNALVQRPSSLCSV--RSVSRAFGLKSSSF---RVSAMATYKVKLIGP 67
           +S ++ T+  RR     Q P SL S+   +    FGLKSS+    RV+AMATYKVK I P
Sbjct: 7   SSAIVSTSFLRRQ----QTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITP 66

Query: 68  NGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDKQM 127
            GE+ E E  +D Y+LD+AE+AGLDLPYSCRAG+CS+CAG+VVSG++DQSD SFLDD+QM
Sbjct: 67  EGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 126

Query: 128 EKGYVLTCVAYPQSDCVIQTHKE 146
            +GYVLTCVAYP SD VI+THKE
Sbjct: 127 SEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of Bhi04G001324 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 6.9e-38
Identity = 86/146 (58.90%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 8   TSCLIKTTTPRRSNALVQRPSSLCSVRSVS--RAFGLKSSSF---RVSAMATYKVKLIGP 67
           +S ++ T+  RRS A    P SL S+ S +    FGLKS +    RV+AMATYKVK I P
Sbjct: 7   SSAIVGTSFIRRSPA----PISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITP 66

Query: 68  NGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDKQM 127
            G E E E  DD Y+LD+AE+AG+DLPYSCRAG+CS+CAG+VVSG+VDQSD SFLDD+Q+
Sbjct: 67  EG-ELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 126

Query: 128 EKGYVLTCVAYPQSDCVIQTHKEGDL 149
            +G+VLTC AYP SD  I+THKE D+
Sbjct: 127 GEGFVLTCAAYPTSDVTIETHKEEDI 147

[Close]

BLAST of Bhi04G001324 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33
Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 40  FGLKSSS---FRVSAMATYKVKLIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGA 99
           FGL SS     +V A  + KVKLI P GEE E E  +D  IL+SAE+AGL+LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 100 CSTCAGQVVSGTVDQSDGSFLDDKQMEKGYVLTCVAYPQSDCVIQTHKEGDL 149
           C TC G++VSG VDQS GSFL+++Q++KGY+LTC+A P  DCV+ THK+ DL
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147

[Close]

BLAST of Bhi04G001324 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 6.7e-17
Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 1   MLTIKLPT-SCLIKTTTPRRSNAL-VQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVK 60
           M T+ LPT +  I    P  SN+      ++  S  +  R F    ++ R+ A A YKV 
Sbjct: 1   MATLPLPTQTSTISLPKPYLSNSFSFPLRNATLSTTTNRRNF---LTTGRIIARA-YKV- 60

Query: 61  LIGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLD 120
           ++  +G+  E E   D  IL  A D+GLD+PY C  G C TC  ++V+GTVDQS G  L 
Sbjct: 61  VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLS 120

Query: 121 DKQMEKGYVLTCVAYPQSDCVIQTHKEGDL 149
           D  +E+GY L C +YP SDC I+   E +L
Sbjct: 121 DDVVERGYTLLCASYPTSDCHIKMIPEEEL 144

[Close]

BLAST of Bhi04G001324 vs. TrEMBL
Match: tr|A0A1S3C4A6|A0A1S3C4A6_CUCME (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496509 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-68
Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M T+ LPTSCLIKT T RRSNALVQRPSSLCS RSVS++FGLKSS  +VSAMA+YKVKLI
Sbjct: 1   MSTVILPTSCLIKTPTLRRSNALVQRPSSLCSFRSVSQSFGLKSSQSKVSAMASYKVKLI 60

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GPNGEENEFEAPDDAYILDSAE+AGLDLPYSCRAGACSTCAGQVVSGTVDQ+DGSFLDDK
Sbjct: 61  GPNGEENEFEAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 120

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QME+GYVLTCVAYPQSDCVI THKEGDLY
Sbjct: 121 QMEQGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]

BLAST of Bhi04G001324 vs. TrEMBL
Match: tr|A0A0A0KNA3|A0A0A0KNA3_CUCSA (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G413260 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 132/149 (88.59%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M T+ LPTS LIK  T RRSNALVQRPSSLCS RSVSR+FGLKSS F+VSAMA+YKVKLI
Sbjct: 1   MSTVTLPTSSLIKPPTLRRSNALVQRPSSLCSFRSVSRSFGLKSSQFKVSAMASYKVKLI 60

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GP+GEENEF+APDDAYILDSAE+AGLDLPYSCRAGACSTCAGQVVSGTVDQ+DGSFLDDK
Sbjct: 61  GPDGEENEFDAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 120

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QMEKGYVLTCVAYPQSDCVI THKEGDLY
Sbjct: 121 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]

BLAST of Bhi04G001324 vs. TrEMBL
Match: tr|A0A2N9G5C9|A0A2N9G5C9_FAGSY (Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22640 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-61
Identity = 118/149 (79.19%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M T+++P SCL KT  P RS AL++ PSSL SV+SVS+ FGLKSS F++SAMA YKVKLI
Sbjct: 6   MSTLRVPMSCLSKTAPPSRSCALIKSPSSLGSVKSVSKTFGLKSSPFKISAMAVYKVKLI 65

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GP+GEENEF+APDD YILDSAE+AGL+LPYSCRAGACSTCAGQ++SGTVDQSDGSFLDDK
Sbjct: 66  GPDGEENEFDAPDDTYILDSAENAGLELPYSCRAGACSTCAGQMISGTVDQSDGSFLDDK 125

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QMEKGYVLTCV+YP SDCVI THKEGDLY
Sbjct: 126 QMEKGYVLTCVSYPTSDCVIHTHKEGDLY 154

[Close]

BLAST of Bhi04G001324 vs. TrEMBL
Match: tr|A0A2I4GFC0|A0A2I4GFC0_9ROSI (Ferredoxin OS=Juglans regia OX=51240 GN=LOC109007382 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.6e-60
Identity = 118/150 (78.67%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSS-FRVSAMATYKVKL 60
           M T+++PTSCL+K+    RS AL++ PSSL +V+SVS+ FGLKSSS F+VSAMA YKVKL
Sbjct: 6   MSTVRVPTSCLLKSAPLVRSRALIKTPSSLGNVKSVSKMFGLKSSSPFKVSAMAVYKVKL 65

Query: 61  IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD 120
           IGP+GEENEFEAPDD YILDSAEDAGLDLPYSCRAGACSTCAG ++SG+VDQSDGSFLDD
Sbjct: 66  IGPDGEENEFEAPDDCYILDSAEDAGLDLPYSCRAGACSTCAGMLISGSVDQSDGSFLDD 125

Query: 121 KQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           KQMEKGYVLTCV+YP  DCVI THKEGDLY
Sbjct: 126 KQMEKGYVLTCVSYPTQDCVIHTHKEGDLY 155

[Close]

BLAST of Bhi04G001324 vs. TrEMBL
Match: tr|A0A2P4LUE8|A0A2P4LUE8_QUESU (Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_22774 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.8e-60
Identity = 116/149 (77.85%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M T+++P SCL K   P RS AL++ PSS  SV+SVS+ FGLKSS F++SAMA YKVKLI
Sbjct: 1   MSTVRVPVSCLPKIPPPSRSCALIKSPSSFGSVKSVSKRFGLKSSPFKMSAMAVYKVKLI 60

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GP+GEENEF+APDDAYILDSAE+AGL+LPYSCRAGACSTCAGQ+VSG+VDQSDGSFLDDK
Sbjct: 61  GPDGEENEFDAPDDAYILDSAENAGLELPYSCRAGACSTCAGQLVSGSVDQSDGSFLDDK 120

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QMEKGYVLTCV+YP SDCVI THKEGDL+
Sbjct: 121 QMEKGYVLTCVSYPSSDCVIHTHKEGDLF 149

[Close]

BLAST of Bhi04G001324 vs. NCBI nr
Match: XP_023551682.1 (ferredoxin, root R-B2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 3.7e-69
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M  I LPTSCLIK+ TPRRS ALVQRPSSL SVRSVSRAFGLKSSSF+V+AMA YKVKLI
Sbjct: 1   MSAINLPTSCLIKSATPRRSCALVQRPSSLGSVRSVSRAFGLKSSSFKVTAMAAYKVKLI 60

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GPNGEENEFEAPDDAYILDSAE+AGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD 
Sbjct: 61  GPNGEENEFEAPDDAYILDSAEEAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDN 120

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QMEKGYVLTCVAYPQSDCVI THKEGDLY
Sbjct: 121 QMEKGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]

BLAST of Bhi04G001324 vs. NCBI nr
Match: XP_022938723.1 (ferredoxin, root R-B2-like [Cucurbita moschata] >XP_022938724.1 ferredoxin, root R-B2-like [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 8.1e-69
Identity = 138/150 (92.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMA-TYKVKL 60
           M  I LPTSCLIK+ TPRRS ALVQRPSSL SVRSVSRAFGLKSSSF+V+AMA TYKVKL
Sbjct: 1   MSAINLPTSCLIKSATPRRSCALVQRPSSLRSVRSVSRAFGLKSSSFKVTAMATTYKVKL 60

Query: 61  IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD 120
           IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD
Sbjct: 61  IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD 120

Query: 121 KQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
            QMEKGYVLTCVAYPQSDCVI THKEGDLY
Sbjct: 121 NQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 150

[Close]

BLAST of Bhi04G001324 vs. NCBI nr
Match: XP_008456600.1 (PREDICTED: ferredoxin, root R-B2-like [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 3.1e-68
Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M T+ LPTSCLIKT T RRSNALVQRPSSLCS RSVS++FGLKSS  +VSAMA+YKVKLI
Sbjct: 1   MSTVILPTSCLIKTPTLRRSNALVQRPSSLCSFRSVSQSFGLKSSQSKVSAMASYKVKLI 60

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GPNGEENEFEAPDDAYILDSAE+AGLDLPYSCRAGACSTCAGQVVSGTVDQ+DGSFLDDK
Sbjct: 61  GPNGEENEFEAPDDAYILDSAENAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDK 120

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QME+GYVLTCVAYPQSDCVI THKEGDLY
Sbjct: 121 QMEQGYVLTCVAYPQSDCVIHTHKEGDLY 149

[Close]

BLAST of Bhi04G001324 vs. NCBI nr
Match: XP_022992802.1 (ferredoxin, root R-B2-like [Cucurbita maxima] >XP_022992803.1 ferredoxin, root R-B2-like [Cucurbita maxima])

HSP 1 Score: 267.3 bits (682), Expect = 3.1e-68
Identity = 137/150 (91.33%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMA-TYKVKL 60
           M  I LPTSCLIK+ TPRRS ALVQRPSSL S RSVSRAFGLKSSSF+V+AMA TYKVKL
Sbjct: 1   MSAINLPTSCLIKSATPRRSCALVQRPSSLGSFRSVSRAFGLKSSSFKVTAMATTYKVKL 60

Query: 61  IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD 120
           IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD
Sbjct: 61  IGPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDD 120

Query: 121 KQMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
            QMEKGYVLTCVAYPQSDCVI THKEGDLY
Sbjct: 121 NQMEKGYVLTCVAYPQSDCVIHTHKEGDLY 150

[Close]

BLAST of Bhi04G001324 vs. NCBI nr
Match: XP_022922440.1 (ferredoxin, root R-B2-like [Cucurbita moschata] >XP_022922445.1 ferredoxin, root R-B2-like [Cucurbita moschata])

HSP 1 Score: 265.8 bits (678), Expect = 9.0e-68
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MLTIKLPTSCLIKTTTPRRSNALVQRPSSLCSVRSVSRAFGLKSSSFRVSAMATYKVKLI 60
           M T++LPTSCLI+  TPR+S ALVQRPSSL S RSVSRAFGLKSSSF+VSAMA+YKVKLI
Sbjct: 1   MSTVRLPTSCLIRNATPRKSCALVQRPSSLSSFRSVSRAFGLKSSSFKVSAMASYKVKLI 60

Query: 61  GPNGEENEFEAPDDAYILDSAEDAGLDLPYSCRAGACSTCAGQVVSGTVDQSDGSFLDDK 120
           GPNGEENEFEAPDD YILDSAE AGLDLPYSCRAGACSTCAGQVVSGTVDQ+DGSFLDD+
Sbjct: 61  GPNGEENEFEAPDDTYILDSAESAGLDLPYSCRAGACSTCAGQVVSGTVDQTDGSFLDDQ 120

Query: 121 QMEKGYVLTCVAYPQSDCVIQTHKEGDLY 150
           QMEKGYVLTCVAYPQSDCVI THKEGDL+
Sbjct: 121 QMEKGYVLTCVAYPQSDCVIHTHKEGDLF 149

The following BLAST results are available for this feature:

BLAST of Bhi04G001324 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P27788\|FER3_MAIZE	1.2e-47	64.47	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
sp\|Q9ZQG8\|FER3_ARATH	1.2e-44	60.00	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
sp\|P14937\|FER2_RAPSA	3.2e-40	77.32	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
sp\|P14936\|FER1_RAPSA	1.2e-39	76.29	Ferredoxin, root R-B1 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
sp\|O04090\|FER1_ARATH	3.9e-38	60.84	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]

BLAST of Bhi04G001324 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27510.1	6.9e-46	60.00	ferredoxin 3	[more]
AT1G10960.1	2.2e-39	60.84	ferredoxin 1	[more]
AT1G60950.1	6.9e-38	58.90	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	3.9e-33	58.93	ferredoxin 4	[more]
AT4G14890.1	6.7e-17	39.33	2Fe-2S ferredoxin-like superfamily protein	[more]

BLAST of Bhi04G001324 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4A6\|A0A1S3C4A6_CUCME	2.0e-68	89.26	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496509 PE=3 SV=1	[more]
tr\|A0A0A0KNA3\|A0A0A0KNA3_CUCSA	1.0e-67	88.59	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G413260 PE=3 SV=1	[more]
tr\|A0A2N9G5C9\|A0A2N9G5C9_FAGSY	1.4e-61	79.19	Ferredoxin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22640 PE=3 SV=1	[more]
tr\|A0A2I4GFC0\|A0A2I4GFC0_9ROSI	4.6e-60	78.67	Ferredoxin OS=Juglans regia OX=51240 GN=LOC109007382 PE=3 SV=1	[more]
tr\|A0A2P4LUE8\|A0A2P4LUE8_QUESU	7.8e-60	77.85	Ferredoxin OS=Quercus suber OX=58331 GN=CFP56_22774 PE=3 SV=1	[more]

BLAST of Bhi04G001324 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551682.1	3.7e-69	91.28	ferredoxin, root R-B2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938723.1	8.1e-69	92.00	ferredoxin, root R-B2-like [Cucurbita moschata] >XP_022938724.1 ferredoxin, root...	[more]
XP_008456600.1	3.1e-68	89.26	PREDICTED: ferredoxin, root R-B2-like [Cucumis melo]	[more]
XP_022992802.1	3.1e-68	91.33	ferredoxin, root R-B2-like [Cucurbita maxima] >XP_022992803.1 ferredoxin, root R...	[more]
XP_022922440.1	9.0e-68	87.92	ferredoxin, root R-B2-like [Cucurbita moschata] >XP_022922445.1 ferredoxin, root...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0051536	iron-sulfur cluster binding
GO:0009055	electron carrier activity

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR006058	2Fe2S_fd_BS
IPR010241	Fd_pln
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001324	Bhi04M001324	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 62..135 e-value: 2.3E-20 score: 72.2
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 55..146 score: 13.084
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 60..141 e-value: 9.81839E-32 score: 109.407
IPR012675	Beta-grasp domain superfamily	GENE3D	G3DSA:3.10.20.30		coord: 52..149 e-value: 2.7E-33 score: 115.8
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 53..149 e-value: 7.8E-51 score: 167.9
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 1..149
None	No IPR available	PANTHER	PTHR43112:SF12	SUBFAMILY NOT NAMED	coord: 1..149
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 92..100
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	SSF54292	2Fe-2S ferredoxin-like	coord: 39..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G001324	Csa6G045160	Cucumber (Chinese Long) v2	cuwgoB588
Bhi04G001324	MELO3C019895	Melon (DHL92) v3.5.1	mewgoB326
Bhi04G001324	ClCG08G008270	Watermelon (Charleston Gray)	wcgwgoB628
Bhi04G001324	CSPI06G03960	Wild cucumber (PI 183967)	cpiwgoB593
Bhi04G001324	Cucsa.364660	Cucumber (Gy14) v1	cgywgoB731
Bhi04G001324	CmaCh04G025190	Cucurbita maxima (Rimu)	cmawgoB0861
Bhi04G001324	CmaCh15G005210	Cucurbita maxima (Rimu)	cmawgoB0398
Bhi04G001324	CmoCh04G026380	Cucurbita moschata (Rifu)	cmowgoB0858
Bhi04G001324	CmoCh15G005290	Cucurbita moschata (Rifu)	cmowgoB0393
Bhi04G001324	Lsi08G006470	Bottle gourd (USVL1VR-Ls)	lsiwgoB593
Bhi04G001324	Cp4.1LG13g10550	Cucurbita pepo (Zucchini)	cpewgoB0248
Bhi04G001324	Cp4.1LG01g25010	Cucurbita pepo (Zucchini)	cpewgoB0526
Bhi04G001324	CsGy6G003930	Cucumber (Gy14) v2	cgybwgoB560
Bhi04G001324	MELO3C019895.2	Melon (DHL92) v3.6.1	medwgoB325
Bhi04G001324	Carg01678	Silver-seed gourd	carwgoB0965
Bhi04G001324	Carg04621	Silver-seed gourd	carwgoB0806
Bhi04G001324	CsaV3_6G004230	Cucumber (Chinese Long) v3	cucwgoB607
Bhi04G001324	Cla013694	Watermelon (97103) v1	wgowmB313

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G001324	Watermelon (97103) v2	wgowmbB329