Cucsa.356760 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356760
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	ROP-interactive CRIB motif protein
Location	scaffold03577 : 1622902 .. 1624941 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTGAAAAAGAAGAAGAATGAGGCGTAAAATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGTATCTCTGAAACAAGTGTTGCTGTGGGAATTCAACACAATTCAACAACTTCAAAACCCCATCCTATCTCTTCTCCCACATCAAGTCTTTCTTCTATCTATTTCTCCTTAATTTCTTTTCTTTCTTTGCTATCCATGCATGTCGTCTCCATCACAGTCAGAGTTAAGGATATTTTTCTTAGAAGAAGTAAAAAGTTTTTAGAGTTGTTCAGTTTAATTTCGGTTTCATATTGAAATAGAAAAGTAGAAATTTACTCCTATCTCATGAGGTTCTAGCTAGATTTATAGTTTGATTCTAAAAGACTTGGGGGCAAAATTGAAAGAAAAATGATAAGATTTTTTAGGTATTATTGTATATATGTGTATGTATTTTTTGGAATTAATTACGATGAATGAAGGATGGCTTTTTGTTTGAACTTACATGGATTTTTGTTTTTGTTTTTTTATTGGAAGAAGGTGAGAAAGATGAAGATGGGAAAGAAGAAATTGGTTGTGAAAGTTTATTAGAGGAAAGCTTGAAGAATTCTCAAAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGGTGAGTTTTATTTTTCTTTCCCTAAATAACAATTTTTTTTCTTTGGAGCATGTATTTAAATTTTGGTGATTTCTTGTTTTTGAAAACTAAGTTTATAATCACTTGCCACCTAATTAGTTTATATATATATATATTTTAATTTACCTAGCTTCCATCAATGTTTTAAAAAAAACCCACCCAAACTTTGATATTTTCTTTTATATAAAACTTGTGCTTTGTTTTTTAATTTTGATTAAAAATTCAACTTTTTACTTTAAAAAATAAAAGATAAAAATTATGAAAATATAGTTAAGGGGAAAAAATAGATAACATTTTGGTTTGAGTTCTTCCGTTTTTTTTAAAAAAAGAAAATAAAAATTCCTATTTACAGCATTTTCTTCCCTTCCTTATTCAAATATAATTTCAAAACATATTATGAAATCTTAATTAAATTTTAAAATTAAAGGGGTAGTTTTCAAGATTTTGTATTTCCTTCTAAATTTGGATTAAAATTCCAAGTGTCTTGAAAAAAATAAAATAAAGGAAAGCAATGAGGAAGAAACTATATTATTTTTAAATATGATAGGCTTATTTTGGAAGCATTTTCAAAAATATATAAATTAAAATATTTACAAGCTATAGAAATTTTTTGAATTCTATCGATTAGATTTCTATCACTGTCAATGATAGAAACATATCGGCGTTTGTTGAAGTTTATTATTGATAGAATTTGAAAATTTGTTGTATGTTGTAAATGTTTTATCAAATTTGATATTTTTACGTTTTCACTTTATTTAGAGTTAATTACTTTCAAATATACTAAAATGAGAATTTATTTATAATAGCAAAATGTTATTGTCAATCCGATCAACATTCATGAACACCGAGATAGAGAATGATAATTTACTTTATAATACCTTTTATAACCATTGCATTTTAAAAGTTAGAGAAAAGTCAAATAGAAAAAACTTCAATCAACAAAACCAAAAGATAACAAAGTAAATACAAAGTTTTTACCAAAATAATTAAAAAGCTCCCAATGAACATTATGAATCAAAATCCCTAACTGTTTTTCTTTTTCTTTTTGTGGGTAATGATATTATTTTTGAAAAAAGTGTACAAAGAAGAGATGGAAGAAATGGAGATGGAAATGGAAATAGGATCTCCAACAGATGTGAAGCATGTGACACACATAGGATGTGATGCCACAACAAGAGAAGATGCTGCCAATTCTTTCATTGCTTGGGAAACTCTTCTAGCTTCTTCTTCTTGGAGGCAATTTGATGATCAACTTTCAAACCCTAAGCATTTACCTAATATTCTTGGTCACTCCATTTGAAATAATACTAATACTAATAATATAACAATAATCTCTCCA

mRNA sequence

TTTTGTGAAAAAGAAGAAGAATGAGGCGTAAAATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGTATCTCTGAAACAAGTGTTGCTGTGGGAATTCAACACAATTCAACAACTTCAAAACCCCATCCTATCTCTTCTCCCACATCAAGTGAGAAAGATGAAGATGGGAAAGAAGAAATTGGTTGTGAAAGTTTATTAGAGGAAAGCTTGAAGAATTCTCAAAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGTGTACAAAGAAGAGATGGAAGAAATGGAGATGGAAATGGAAATAGGATCTCCAACAGATGTGAAGCATGTGACACACATAGGATGTGATGCCACAACAAGAGAAGATGCTGCCAATTCTTTCATTGCTTGGGAAACTCTTCTAGCTTCTTCTTCTTGGAGGCAATTTGATGATCAACTTTCAAACCCTAAGCATTTACCTAATATTCTTGGTCACTCCATTTGAAATAATACTAATACTAATAATATAACAATAATCTCTCCA

Coding sequence (CDS)

ATGAGGCGTAAAATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGTATCTCTGAAACAAGTGTTGCTGTGGGAATTCAACACAATTCAACAACTTCAAAACCCCATCCTATCTCTTCTCCCACATCAAGTGAGAAAGATGAAGATGGGAAAGAAGAAATTGGTTGTGAAAGTTTATTAGAGGAAAGCTTGAAGAATTCTCAAAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGTGTACAAAGAAGAGATGGAAGAAATGGAGATGGAAATGGAAATAGGATCTCCAACAGATGTGAAGCATGTGACACACATAGGATGTGATGCCACAACAAGAGAAGATGCTGCCAATTCTTTCATTGCTTGGGAAACTCTTCTAGCTTCTTCTTCTTGGAGGCAATTTGATGATCAACTTTCAAACCCTAAGCATTTACCTAATATTCTTGGTCACTCCATTTGA

Protein sequence

MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI*

Homology

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BLAST of Cucsa.356760 vs. Swiss-Prot
Match: RIC4_ARATH (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.5e-22
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MR +MERLV+LPFS+GCIS +SVAV     S  SKPH   S     E++E          
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV----LSPLSKPHHHHSRQVIREQEE---------- 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK-EEMEEMEME-MEIGSPTD 120
             E+++KN  +F A++KP I +G +R++K FK ISQLF  K EE EE+E   MEIG PT+
Sbjct: 61  --EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTN 120

Query: 121 VKHVTHIGCD-----ATTREDAANSFIAWETLLASSSWRQFDDQL 159
           VKHV+HIG +     AT         I  E L A++S ++ +  L
Sbjct: 121 VKHVSHIGWESGLTAATGPGKGWEDLIPPELLAAAASKKEINPHL 149

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BLAST of Cucsa.356760 vs. Swiss-Prot
Match: RIC2_ARATH (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1


Query: 79  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMEMEIGSPTDVKHVTHIGCDA--TTREDA 138
           NI  G +R+ + FK+ S  F+ Y+EE +E E EMEIG PTDVKH++HIG D   TT ++ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 139 ANSF 140
           ++SF
Sbjct: 96  SSSF 99

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BLAST of Cucsa.356760 vs. TrEMBL
Match: A0A0A0LY31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658520 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.0e-91
Identity = 170/172 (98.84%), Postives = 170/172 (98.84%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS  EKDEDGKEEIGCES
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS-EKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173
           HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Cucsa.356760 vs. TrEMBL
Match: B9N155_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08440g PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.7e-33
Identity = 80/147 (54.42%), Postives = 96/147 (65.31%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MR +MERLVLLPFS GC+SE+SVA+G+ H    +K     S T   E+DE+         
Sbjct: 1   MRDRMERLVLLPFSFGCVSESSVAIGV-HQPRRAKTDTNLSATRTKEEDEESSSSA---- 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
              ES+K S +F AL+KPNI  G HRL KGFKN SQLF YKEE+EE EMEMEIG PTDVK
Sbjct: 61  ---ESMKTSLKFLALSKPNISTGLHRLIKGFKNFSQLFAYKEEIEEFEMEMEIGLPTDVK 120

Query: 121 HVTHIGCDATTREDAANSFIAWETLLA 148
           HVTHIG DA+      N    W+ L++
Sbjct: 121 HVTHIGWDASA--PTTNPVHGWDNLIS 137

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BLAST of Cucsa.356760 vs. TrEMBL
Match: A0A067K4X2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18022 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-31
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 1


Query: 5   MERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCESLLEE 64
           MERLVLLPFS+GC+SE+SVA+GI H   T KP   ++P+S   K+ED +E +   S  +E
Sbjct: 1   MERLVLLPFSIGCVSESSVAIGIHHPRRT-KPSHDTNPSSTRPKEED-EESL---SSSDE 60

Query: 65  SLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTH 124
           S+KN+ +F AL+KPNI   FHR+ KGFK  SQLFVY+EE+E  EMEMEIG PTDVKHVTH
Sbjct: 61  SMKNALKFLALSKPNISDRFHRIVKGFKTFSQLFVYEEEIE--EMEMEIGLPTDVKHVTH 120

Query: 125 IGCDATTREDAANSFIAWETLLA-------SSSWRQFD 156
           IG D +  E   N    W+ L++         S RQF+
Sbjct: 121 IGWDGSGNE---NPIQGWDNLISPDQLLPLQPSLRQFE 148

[Close]

BLAST of Cucsa.356760 vs. TrEMBL
Match: V7B4D3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G054500g PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-31
Identity = 85/148 (57.43%), Postives = 103/148 (69.59%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSP-TSKGEKDEDGKEEIGCE 60
           MR+KMERLV+LPFS GCISE +VAVG+ H S  SKPH  SSP T KG K   G E+   E
Sbjct: 1   MRQKMERLVILPFSAGCISEATVAVGLPH-SRRSKPHTSSSPPTIKGAK---GVED--SE 60

Query: 61  SLLEESLKNSQRFT-ALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTD 120
           SL  ES+KNS R   A+ K N+  GF+RL+KGFKN SQ FV K+E EE+EM+MEIG PTD
Sbjct: 61  SLSGESMKNSLRLLDAVPKANLSNGFNRLFKGFKNFSQFFVEKDEYEEVEMDMEIGCPTD 120

Query: 121 VKHVTHIGCDATTREDAANSFIAWETLL 147
           V+HVTHIG D      +A+    W+ L+
Sbjct: 121 VQHVTHIGWDGIA--TSADPIRGWDPLI 140

[Close]

BLAST of Cucsa.356760 vs. TrEMBL
Match: M5W1D2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014687mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 86/167 (51.50%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MR +MERLVLLPF+ GC+SE+SVAVG+Q     SK   I SP    E  ++ +EE   +S
Sbjct: 1   MRERMERLVLLPFTFGCVSESSVAVGVQ-PPRRSKSDTIPSPIRTKEVGDEEEEE---DS 60

Query: 61  LLEESLKNSQRFTALAKPNIGV-GFHRLYKGFKNISQLFVYK-EEMEE-MEMEMEIGSPT 120
           L  ES KNS R  +L KPNI   G HRL+KGFKN SQ+FVYK ++MEE MEM+MEIG PT
Sbjct: 61  LSGESTKNSFRSLSLPKPNISTSGIHRLFKGFKNFSQIFVYKDDDMEEIMEMDMEIGGPT 120

Query: 121 DVKHVTHIGCDATTREDAANS--FIAWETLLASS-------SWRQFD 156
           DVKHVTHIG D +    +A +     W+ L++         SW QF+
Sbjct: 121 DVKHVTHIGWDGSASAASATTDPIRGWDNLISPDLLSVSPVSWSQFE 163

[Close]

BLAST of Cucsa.356760 vs. TAIR10
Match: AT5G16490.1 (AT5G16490.1 ROP-interactive CRIB motif-containing protein 4)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-23
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MR +MERLV+LPFS+GCIS +SVAV     S  SKPH   S     E++E          
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV----LSPLSKPHHHHSRQVIREQEE---------- 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK-EEMEEMEME-MEIGSPTD 120
             E+++KN  +F A++KP I +G +R++K FK ISQLF  K EE EE+E   MEIG PT+
Sbjct: 61  --EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTN 120

Query: 121 VKHVTHIGCD-----ATTREDAANSFIAWETLLASSSWRQFDDQL 159
           VKHV+HIG +     AT         I  E L A++S ++ +  L
Sbjct: 121 VKHVSHIGWESGLTAATGPGKGWEDLIPPELLAAAASKKEINPHL 149

[Close]

BLAST of Cucsa.356760 vs. TAIR10
Match: AT1G27380.2 (AT1G27380.2 ROP-interactive CRIB motif-containing protein 2)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1


Query: 79  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMEMEIGSPTDVKHVTHIGCDA--TTREDA 138
           NI  G +R+ + FK+ S  F+ Y+EE +E E EMEIG PTDVKH++HIG D   TT ++ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 139 ANSF 140
           ++SF
Sbjct: 96  SSSF 99

[Close]

BLAST of Cucsa.356760 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 50.8 bits (120), Expect = 9.6e-07
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 1


Query: 87  LYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATTREDAANSFI 141
           L KG + ISQ+F  + E EE   EM+IG+PTDVKHV HIG D  +    A S++
Sbjct: 13  LLKGLRYISQVFAIEGEKEE---EMQIGNPTDVKHVAHIGWDGPSDNATAPSWM 63

[Close]

BLAST of Cucsa.356760 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1


Query: 87  LYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATT 132
           +YKGFK ISQ+F  ++E +E+E    IG PTDVKHV HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDEIE----IGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Cucsa.356760 vs. TAIR10
Match: AT2G33460.1 (AT2G33460.1 ROP-interactive CRIB motif-containing protein 1)

HSP 1 Score: 48.1 bits (113), Expect = 6.2e-06
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 1


Query: 87  LYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATT 132
           L KG + I+Q+F      EE E EM+IG PTDVKHV HIG D  T
Sbjct: 8   LLKGLRYITQIFD-----EEKEQEMQIGFPTDVKHVAHIGSDGPT 47

[Close]

BLAST of Cucsa.356760 vs. NCBI nr
Match: gi|778664127|ref|XP_011660226.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 2.2e-93
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173
           HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Cucsa.356760 vs. NCBI nr
Match: gi|449442675|ref|XP_004139106.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.0e-90
Identity = 170/172 (98.84%), Postives = 170/172 (98.84%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS  EKDEDGKEEIGCES
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS-EKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173
           HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Cucsa.356760 vs. NCBI nr
Match: gi|659085975|ref|XP_008443702.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 3.8e-90
Identity = 169/173 (97.69%), Postives = 169/173 (97.69%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCE 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCER 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTR-EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173
           HVTHIGCDAT R EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173

[Close]

BLAST of Cucsa.356760 vs. NCBI nr
Match: gi|659085987|ref|XP_008443709.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-87
Identity = 167/173 (96.53%), Postives = 167/173 (96.53%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS  EKDEDGKEEIGCE 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS-EKDEDGKEEIGCER 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTR-EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173
           HVTHIGCDAT R EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Cucsa.356760 vs. NCBI nr
Match: gi|470132579|ref|XP_004302157.1| (PREDICTED: CRIB domain-containing protein RIC4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-35
Identity = 84/167 (50.30%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60
           MR +MERLVLLPF++GC+SE+S+AVG Q +   SK     SPT   E++ED +E      
Sbjct: 1   MRERMERLVLLPFTIGCVSESSIAVGAQQHPRRSKSDTNPSPTRTKEEEEDEEEG----- 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
                        +L+KPN+ VG HRL+KGFKN SQLFVYK+EMEE EM+MEIGSPTDVK
Sbjct: 61  ------------DSLSKPNVSVGIHRLFKGFKNFSQLFVYKDEMEEEEMDMEIGSPTDVK 120

Query: 121 HVTHIGCD------ATTREDAANSFIAWETLLASSSWRQFDDQLSNP 162
           HVTHIG D       +    A  + ++W+ L++  SWRQF  +LS P
Sbjct: 121 HVTHIGLDGSGSGSGSAATAATTNKVSWDDLISHVSWRQF--ELSRP 148

The following BLAST results are available for this feature:

BLAST of Cucsa.356760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC4_ARATH	4.5e-22	43.64	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1	[more]
RIC2_ARATH	1.9e-09	50.00	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1	[more]

BLAST of Cucsa.356760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY31_CUCSA	7.0e-91	98.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658520 PE=4 SV=1	[more]
B9N155_POPTR	8.7e-33	54.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08440g PE=4 SV=1	[more]
A0A067K4X2_JATCU	2.1e-31	53.16	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18022 PE=4 SV=1	[more]
V7B4D3_PHAVU	2.1e-31	57.43	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G054500g PE=4 SV=1	[more]
M5W1D2_PRUPE	1.1e-30	51.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014687mg PE=4 SV=1	[more]

BLAST of Cucsa.356760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16490.1	2.5e-23	43.64	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	1.1e-10	50.00	ROP-interactive CRIB motif-containing protein 2	[more]
AT4G28556.1	9.6e-07	50.00	PAK-box/P21-Rho-binding family protein	[more]
AT4G04900.1	1.3e-06	53.33	ROP-interactive CRIB motif-containing protein 10	[more]
AT2G33460.1	6.2e-06	55.56	ROP-interactive CRIB motif-containing protein 1	[more]

BLAST of Cucsa.356760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664127\|ref\|XP_011660226.1\|	2.2e-93	100.00	PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis sativus]	[more]
gi\|449442675\|ref\|XP_004139106.1\|	1.0e-90	98.84	PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis sativus]	[more]
gi\|659085975\|ref\|XP_008443702.1\|	3.8e-90	97.69	PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo]	[more]
gi\|659085987\|ref\|XP_008443709.1\|	1.8e-87	96.53	PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis melo]	[more]
gi\|470132579\|ref\|XP_004302157.1\|	2.1e-35	50.30	PREDICTED: CRIB domain-containing protein RIC4 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.356760.2	Cucsa.356760.2	mRNA
Cucsa.356760.1	Cucsa.356760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 108..150 score: 7.1
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 111..149 score: 1.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 112..125 score: 9
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..149 score: 3.8
None	No IPR available	PANTHER	PTHR23177:SF23	CRIB DOMAIN-CONTAINING PROTEIN RIC4	coord: 1..149 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.356760	Cla009570	Watermelon (97103) v1	cgywmB638
Cucsa.356760	Csa1G658520	Cucumber (Chinese Long) v2	cgycuB500
Cucsa.356760	MELO3C010062	Melon (DHL92) v3.5.1	cgymeB574
Cucsa.356760	ClCG03G010790	Watermelon (Charleston Gray)	cgywcgB605
Cucsa.356760	CSPI01G32380	Wild cucumber (PI 183967)	cgycpiB528
Cucsa.356760	CmaCh11G009410	Cucurbita maxima (Rimu)	cgycmaB0970
Cucsa.356760	CmoCh11G009640	Cucurbita moschata (Rifu)	cgycmoB0973
Cucsa.356760	Lsi06G007050	Bottle gourd (USVL1VR-Ls)	cgylsiB573
Cucsa.356760	Cp4.1LG00g01570	Cucurbita pepo (Zucchini)	cgycpeB0927
Cucsa.356760	MELO3C010062.2	Melon (DHL92) v3.6.1	cgymedB575
Cucsa.356760	CsaV3_1G044570	Cucumber (Chinese Long) v3	cgycucB542
Cucsa.356760	Cla97C03G061380	Watermelon (97103) v2	cgywmbB608
Cucsa.356760	Bhi02G001120	Wax gourd	cgywgoB709
Cucsa.356760	Carg22730	Silver-seed gourd	carcgyB0613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.356760	Silver-seed gourd	carcgyB1085
Cucsa.356760	Cucurbita maxima (Rimu)	cgycmaB0969
Cucsa.356760	Cucurbita moschata (Rifu)	cgycmoB0972
Cucsa.356760	Cucurbita pepo (Zucchini)	cgycpeB0928