Cucsa.356760.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356760.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	ROP-interactive CRIB motif protein
Location	scaffold03577 : 1622902 .. 1624941 (-)
Sequence length	575

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTGAAAAAGAAGAAGAATGAGGCGTAAAATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGTATCTCTGAAACAAGTGTTGCTGTGGGAATTCAACACAATTCAACAACTTCAAAACCCCATCCTATCTCTTCTCCCACATCAAGTCTTTCTTCTATCTATTTCTCCTTAATTTCTTTTCTTTCTTTGCTATCCATGCATGTCGTCTCCATCACAGTCAGAGTTAAGGATATTTTTCTTAGAAGAAGTAAAAAGTTTTTAGAGTTGTTCAGTTTAATTTCGGTTTCATATTGAAATAGAAAAGTAGAAATTTACTCCTATCTCATGAGGTTCTAGCTAGATTTATAGTTTGATTCTAAAAGACTTGGGGGCAAAATTGAAAGAAAAATGATAAGATTTTTTAGGTATTATTGTATATATGTGTATGTATTTTTTGGAATTAATTACGATGAATGAAGGATGGCTTTTTGTTTGAACTTACATGGATTTTTGTTTTTGTTTTTTTATTGGAAGAAGGTGAGAAAGATGAAGATGGGAAAGAAGAAATTGGTTGTGAAAGTTTATTAGAGGAAAGCTTGAAGAATTCTCAAAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGGTGAGTTTTATTTTTCTTTCCCTAAATAACAATTTTTTTTCTTTGGAGCATGTATTTAAATTTTGGTGATTTCTTGTTTTTGAAAACTAAGTTTATAATCACTTGCCACCTAATTAGTTTATATATATATATATTTTAATTTACCTAGCTTCCATCAATGTTTTAAAAAAAACCCACCCAAACTTTGATATTTTCTTTTATATAAAACTTGTGCTTTGTTTTTTAATTTTGATTAAAAATTCAACTTTTTACTTTAAAAAATAAAAGATAAAAATTATGAAAATATAGTTAAGGGGAAAAAATAGATAACATTTTGGTTTGAGTTCTTCCGTTTTTTTTAAAAAAAGAAAATAAAAATTCCTATTTACAGCATTTTCTTCCCTTCCTTATTCAAATATAATTTCAAAACATATTATGAAATCTTAATTAAATTTTAAAATTAAAGGGGTAGTTTTCAAGATTTTGTATTTCCTTCTAAATTTGGATTAAAATTCCAAGTGTCTTGAAAAAAATAAAATAAAGGAAAGCAATGAGGAAGAAACTATATTATTTTTAAATATGATAGGCTTATTTTGGAAGCATTTTCAAAAATATATAAATTAAAATATTTACAAGCTATAGAAATTTTTTGAATTCTATCGATTAGATTTCTATCACTGTCAATGATAGAAACATATCGGCGTTTGTTGAAGTTTATTATTGATAGAATTTGAAAATTTGTTGTATGTTGTAAATGTTTTATCAAATTTGATATTTTTACGTTTTCACTTTATTTAGAGTTAATTACTTTCAAATATACTAAAATGAGAATTTATTTATAATAGCAAAATGTTATTGTCAATCCGATCAACATTCATGAACACCGAGATAGAGAATGATAATTTACTTTATAATACCTTTTATAACCATTGCATTTTAAAAGTTAGAGAAAAGTCAAATAGAAAAAACTTCAATCAACAAAACCAAAAGATAACAAAGTAAATACAAAGTTTTTACCAAAATAATTAAAAAGCTCCCAATGAACATTATGAATCAAAATCCCTAACTGTTTTTCTTTTTCTTTTTGTGGGTAATGATATTATTTTTGAAAAAAGTGTACAAAGAAGAGATGGAAGAAATGGAGATGGAAATGGAAATAGGATCTCCAACAGATGTGAAGCATGTGACACACATAGGATGTGATGCCACAACAAGAGAAGATGCTGCCAATTCTTTCATTGCTTGGGAAACTCTTCTAGCTTCTTCTTCTTGGAGGCAATTTGATGATCAACTTTCAAACCCTAAGCATTTACCTAATATTCTTGGTCACTCCATTTGAAATAATACTAATACTAATAATATAACAATAATCTCTCCA

mRNA sequence

TTTTGTGAAAAAGAAGAAGAATGAGGCGTAAAATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGTATCTCTGAAACAAGTGTTGCTGTGGGAATTCAACACAATTCAACAACTTCAAAACCCCATCCTATCTCTTCTCCCACATCAAGTGAGAAAGATGAAGATGGGAAAGAAGAAATTGGTTGTGAAAGTTTATTAGAGGAAAGCTTGAAGAATTCTCAAAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGTGTACAAAGAAGAGATGGAAGAAATGGAGATGGAAATGGAAATAGGATCTCCAACAGATGTGAAGCATGTGACACACATAGGATGTGATGCCACAACAAGAGAAGATGCTGCCAATTCTTTCATTGCTTGGGAAACTCTTCTAGCTTCTTCTTCTTGGAGGCAATTTGATGATCAACTTTCAAACCCTAAGCATTTACCTAATATTCTTGGTCACTCCATTTGAAATAATACTAATACTAATAATATAACAATAATCTCTCCA

Coding sequence (CDS)

ATGAGGCGTAAAATGGAGAGATTGGTTCTTCTTCCTTTCTCTGTGGGATGTATCTCTGAAACAAGTGTTGCTGTGGGAATTCAACACAATTCAACAACTTCAAAACCCCATCCTATCTCTTCTCCCACATCAAGTGAGAAAGATGAAGATGGGAAAGAAGAAATTGGTTGTGAAAGTTTATTAGAGGAAAGCTTGAAGAATTCTCAAAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGTGTACAAAGAAGAGATGGAAGAAATGGAGATGGAAATGGAAATAGGATCTCCAACAGATGTGAAGCATGTGACACACATAGGATGTGATGCCACAACAAGAGAAGATGCTGCCAATTCTTTCATTGCTTGGGAAACTCTTCTAGCTTCTTCTTCTTGGAGGCAATTTGATGATCAACTTTCAAACCCTAAGCATTTACCTAATATTCTTGGTCACTCCATTTGA

Protein sequence

MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI*

Homology

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BLAST of Cucsa.356760.2 vs. Swiss-Prot
Match: RIC4_ARATH (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-22
Identity = 71/164 (43.29%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MR +MERLV+LPFS+GCIS +SVAV     S  SKPH   S     + E+          
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV----LSPLSKPHHHHSRQVIREQEE---------- 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK-EEMEEMEME-MEIGSPTDV 120
            E+++KN  +F A++KP I +G +R++K FK ISQLF  K EE EE+E   MEIG PT+V
Sbjct: 61  -EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTNV 120

Query: 121 KHVTHIGCD-----ATTREDAANSFIAWETLLASSSWRQFDDQL 158
           KHV+HIG +     AT         I  E L A++S ++ +  L
Sbjct: 121 KHVSHIGWESGLTAATGPGKGWEDLIPPELLAAAASKKEINPHL 149

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BLAST of Cucsa.356760.2 vs. Swiss-Prot
Match: RIC2_ARATH (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1


Query: 78  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMEMEIGSPTDVKHVTHIGCDA--TTREDA 137
           NI  G +R+ + FK+ S  F+ Y+EE +E E EMEIG PTDVKH++HIG D   TT ++ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 138 ANSF 139
           ++SF
Sbjct: 96  SSSF 99

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BLAST of Cucsa.356760.2 vs. TrEMBL
Match: A0A0A0LY31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658520 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 9.7e-93
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120
           LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 VTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172
           VTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 VTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

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BLAST of Cucsa.356760.2 vs. TrEMBL
Match: B9N155_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08440g PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.6e-33
Identity = 77/146 (52.74%), Postives = 95/146 (65.07%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MR +MERLVLLPFS GC+SE+SVA+G+           +S+  + E+DE+          
Sbjct: 1   MRDRMERLVLLPFSFGCVSESSVAIGVHQPRRAKTDTNLSATRTKEEDEESSSSA----- 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120
             ES+K S +F AL+KPNI  G HRL KGFKN SQLF YKEE+EE EMEMEIG PTDVKH
Sbjct: 61  --ESMKTSLKFLALSKPNISTGLHRLIKGFKNFSQLFAYKEEIEEFEMEMEIGLPTDVKH 120

Query: 121 VTHIGCDATTREDAANSFIAWETLLA 147
           VTHIG DA+      N    W+ L++
Sbjct: 121 VTHIGWDASA--PTTNPVHGWDNLIS 137

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BLAST of Cucsa.356760.2 vs. TrEMBL
Match: A0A067K4X2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18022 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.6e-32
Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 1


Query: 5   MERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESLLEES 64
           MERLVLLPFS+GC+SE+SVA+GI H   T KP   ++P+S+   E+ +E +   S  +ES
Sbjct: 1   MERLVLLPFSIGCVSESSVAIGIHHPRRT-KPSHDTNPSSTRPKEEDEESL---SSSDES 60

Query: 65  LKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHI 124
           +KN+ +F AL+KPNI   FHR+ KGFK  SQLFVY+EE+E  EMEMEIG PTDVKHVTHI
Sbjct: 61  MKNALKFLALSKPNISDRFHRIVKGFKTFSQLFVYEEEIE--EMEMEIGLPTDVKHVTHI 120

Query: 125 GCDATTREDAANSFIAWETLLA-------SSSWRQFD 155
           G D +  E   N    W+ L++         S RQF+
Sbjct: 121 GWDGSGNE---NPIQGWDNLISPDQLLPLQPSLRQFE 148

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BLAST of Cucsa.356760.2 vs. TrEMBL
Match: V7B4D3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G054500g PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.2e-31
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MR+KMERLV+LPFS GCISE +VAVG+ H S  SKPH  SSP +  K   G E+   ESL
Sbjct: 1   MRQKMERLVILPFSAGCISEATVAVGLPH-SRRSKPHTSSSPPTI-KGAKGVED--SESL 60

Query: 61  LEESLKNSQRFT-ALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
             ES+KNS R   A+ K N+  GF+RL+KGFKN SQ FV K+E EE+EM+MEIG PTDV+
Sbjct: 61  SGESMKNSLRLLDAVPKANLSNGFNRLFKGFKNFSQFFVEKDEYEEVEMDMEIGCPTDVQ 120

Query: 121 HVTHIGCDATTREDAANSFIAWETLL 146
           HVTHIG D      +A+    W+ L+
Sbjct: 121 HVTHIGWDGIA--TSADPIRGWDPLI 140

[Close]

BLAST of Cucsa.356760.2 vs. TrEMBL
Match: M5W1D2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014687mg PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30
Identity = 87/166 (52.41%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MR +MERLVLLPF+ GC+SE+SVAVG+Q     SK   I SP  ++  E G EE   +SL
Sbjct: 1   MRERMERLVLLPFTFGCVSESSVAVGVQ-PPRRSKSDTIPSPIRTK--EVGDEEEEEDSL 60

Query: 61  LEESLKNSQRFTALAKPNIGV-GFHRLYKGFKNISQLFVYK-EEMEE-MEMEMEIGSPTD 120
             ES KNS R  +L KPNI   G HRL+KGFKN SQ+FVYK ++MEE MEM+MEIG PTD
Sbjct: 61  SGESTKNSFRSLSLPKPNISTSGIHRLFKGFKNFSQIFVYKDDDMEEIMEMDMEIGGPTD 120

Query: 121 VKHVTHIGCDATTREDAANS--FIAWETLLASS-------SWRQFD 155
           VKHVTHIG D +    +A +     W+ L++         SW QF+
Sbjct: 121 VKHVTHIGWDGSASAASATTDPIRGWDNLISPDLLSVSPVSWSQFE 163

[Close]

BLAST of Cucsa.356760.2 vs. TAIR10
Match: AT5G16490.1 (AT5G16490.1 ROP-interactive CRIB motif-containing protein 4)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 71/164 (43.29%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MR +MERLV+LPFS+GCIS +SVAV     S  SKPH   S     + E+          
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV----LSPLSKPHHHHSRQVIREQEE---------- 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK-EEMEEMEME-MEIGSPTDV 120
            E+++KN  +F A++KP I +G +R++K FK ISQLF  K EE EE+E   MEIG PT+V
Sbjct: 61  -EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTNV 120

Query: 121 KHVTHIGCD-----ATTREDAANSFIAWETLLASSSWRQFDDQL 158
           KHV+HIG +     AT         I  E L A++S ++ +  L
Sbjct: 121 KHVSHIGWESGLTAATGPGKGWEDLIPPELLAAAASKKEINPHL 149

[Close]

BLAST of Cucsa.356760.2 vs. TAIR10
Match: AT1G27380.2 (AT1G27380.2 ROP-interactive CRIB motif-containing protein 2)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1


Query: 78  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMEMEIGSPTDVKHVTHIGCDA--TTREDA 137
           NI  G +R+ + FK+ S  F+ Y+EE +E E EMEIG PTDVKH++HIG D   TT ++ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 138 ANSF 139
           ++SF
Sbjct: 96  SSSF 99

[Close]

BLAST of Cucsa.356760.2 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 50.8 bits (120), Expect = 9.5e-07
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 1


Query: 86  LYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATTREDAANSFI 140
           L KG + ISQ+F  + E EE   EM+IG+PTDVKHV HIG D  +    A S++
Sbjct: 13  LLKGLRYISQVFAIEGEKEE---EMQIGNPTDVKHVAHIGWDGPSDNATAPSWM 63

[Close]

BLAST of Cucsa.356760.2 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1


Query: 86  LYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATT 131
           +YKGFK ISQ+F  ++E +E+E    IG PTDVKHV HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDEIE----IGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Cucsa.356760.2 vs. TAIR10
Match: AT2G33460.1 (AT2G33460.1 ROP-interactive CRIB motif-containing protein 1)

HSP 1 Score: 48.1 bits (113), Expect = 6.2e-06
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 1


Query: 86  LYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATT 131
           L KG + I+Q+F      EE E EM+IG PTDVKHV HIG D  T
Sbjct: 8   LLKGLRYITQIFD-----EEKEQEMQIGFPTDVKHVAHIGSDGPT 47

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BLAST of Cucsa.356760.2 vs. NCBI nr
Match: gi|449442675|ref|XP_004139106.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 1.4e-92
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120
           LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 VTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172
           VTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 VTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Cucsa.356760.2 vs. NCBI nr
Match: gi|778664127|ref|XP_011660226.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.0e-90
Identity = 170/172 (98.84%), Postives = 170/172 (98.84%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS-EKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS  EKDEDGKEEIGCES
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172
           HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Cucsa.356760.2 vs. NCBI nr
Match: gi|659085987|ref|XP_008443709.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 2.5e-89
Identity = 168/172 (97.67%), Postives = 168/172 (97.67%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCE  
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCERS 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120
           LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 VTHIGCDATTR-EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172
           VTHIGCDAT R EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 VTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Cucsa.356760.2 vs. NCBI nr
Match: gi|659085975|ref|XP_008443702.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-87
Identity = 167/173 (96.53%), Postives = 167/173 (96.53%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS-EKDEDGKEEIGCES 60
           MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS  EKDEDGKEEIGCE 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCER 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTR-EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172
           HVTHIGCDAT R EDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173

[Close]

BLAST of Cucsa.356760.2 vs. NCBI nr
Match: gi|470132579|ref|XP_004302157.1| (PREDICTED: CRIB domain-containing protein RIC4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35
Identity = 83/166 (50.00%), Postives = 110/166 (66.27%), Query Frame = 1


Query: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60
           MR +MERLVLLPF++GC+SE+S+AVG Q +   SK     SPT ++++E+ +EE      
Sbjct: 1   MRERMERLVLLPFTIGCVSESSIAVGAQQHPRRSKSDTNPSPTRTKEEEEDEEE------ 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120
                       +L+KPN+ VG HRL+KGFKN SQLFVYK+EMEE EM+MEIGSPTDVKH
Sbjct: 61  ----------GDSLSKPNVSVGIHRLFKGFKNFSQLFVYKDEMEEEEMDMEIGSPTDVKH 120

Query: 121 VTHIGCD------ATTREDAANSFIAWETLLASSSWRQFDDQLSNP 161
           VTHIG D       +    A  + ++W+ L++  SWRQF  +LS P
Sbjct: 121 VTHIGLDGSGSGSGSAATAATTNKVSWDDLISHVSWRQF--ELSRP 148

The following BLAST results are available for this feature:

BLAST of Cucsa.356760.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC4_ARATH	5.8e-22	43.29	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1	[more]
RIC2_ARATH	1.9e-09	50.00	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1	[more]

BLAST of Cucsa.356760.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY31_CUCSA	9.7e-93	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658520 PE=4 SV=1	[more]
B9N155_POPTR	6.6e-33	52.74	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08440g PE=4 SV=1	[more]
A0A067K4X2_JATCU	9.6e-32	52.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18022 PE=4 SV=1	[more]
V7B4D3_PHAVU	6.2e-31	56.16	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G054500g PE=4 SV=1	[more]
M5W1D2_PRUPE	1.4e-30	52.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014687mg PE=4 SV=1	[more]

BLAST of Cucsa.356760.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16490.1	3.3e-23	43.29	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	1.1e-10	50.00	ROP-interactive CRIB motif-containing protein 2	[more]
AT4G28556.1	9.5e-07	50.00	PAK-box/P21-Rho-binding family protein	[more]
AT4G04900.1	1.2e-06	53.33	ROP-interactive CRIB motif-containing protein 10	[more]
AT2G33460.1	6.2e-06	55.56	ROP-interactive CRIB motif-containing protein 1	[more]

BLAST of Cucsa.356760.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442675\|ref\|XP_004139106.1\|	1.4e-92	100.00	PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis sativus]	[more]
gi\|778664127\|ref\|XP_011660226.1\|	1.0e-90	98.84	PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis sativus]	[more]
gi\|659085987\|ref\|XP_008443709.1\|	2.5e-89	97.67	PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis melo]	[more]
gi\|659085975\|ref\|XP_008443702.1\|	1.8e-87	96.53	PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo]	[more]
gi\|470132579\|ref\|XP_004302157.1\|	1.2e-35	50.00	PREDICTED: CRIB domain-containing protein RIC4 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.356760	Cucsa.356760	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.356760.2	Cucsa.356760.2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.356760.2.CDS.3	Cucsa.356760.2.CDS.3	CDS
Cucsa.356760.2.CDS.2	Cucsa.356760.2.CDS.2	CDS
Cucsa.356760.2.CDS.1	Cucsa.356760.2.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.356760.2.three_prime_UTR.1	Cucsa.356760.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.356760.2.five_prime_UTR.1	Cucsa.356760.2.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 108..150 score: 7.1
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 111..149 score: 1.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 112..125 score: 9
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..149 score: 3.8
None	No IPR available	PANTHER	PTHR23177:SF23	CRIB DOMAIN-CONTAINING PROTEIN RIC4	coord: 1..149 score: 3.8