CmaCh11G009410 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATTGGATGCATCTCGGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTCTTTTCTCGAACTCTCTCTCTCTTTCGTTCTTCGTTCGTTTCAAGTCTCTAATGGTTATTATGAGCTTGTTTGATATCTTATCCCGTTCGAGTTTTTCGTGAATCGGGCTAATTTTTGTATGGGTTTTGTATTGAAGGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTTACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGGTGAGTTTTTTTTTTTTTAATTGAAAAAATAAATTAAAATATTTACTTTTCGGGGTGTTATCGGGAAGGTTTGTGGGTCAGTCGGGCCAAGTTTAGACATTTTTTTAGATCAACCCAATTCTTCATTTCGTAAAATTTTCAACCCAAAAAATCTTTTATTAAAAATAAATTCAAGTCGGTTCAATTCAACCCATGTTAGTTTTACGAGAATCCATGAACCAACTCAATCTATAAAATTTTCATTTATTTGAACGTGGTCAAGCCTACCACTAGCCGATATTGTTCACTTTAGCTCGTTACATATAGTTATAAGTCTCATGGTTTTAAAACGTGTCTATTAAAGAGAGGTTTCCACACCCTCACAAATGATGCTTCGTTCCCCTCTCCAACCGACGTGAAATCTTACAAATAAGTTCAAGACCCAACCCAAACTATACAAAATGAATTGGGTTGCTCGAGTTTTATGAAACATCTAATTTGTTTAAATAATATATTCAAATTATCTTGTCATTATTTCTAAATTCTAATTTATTTTTTTTTTTTGTTTTGTTTTTTGGGTAATGATATTATTTTGGGAAGTGTACAAAGAGGAGATGGAAGAAATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAATAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATGATCATCTTTCAAACTCTAATGTTCTACCTCATTCTATTTGAAAACAAAAAACATATGCTAAAAAGACTCGTGTTGATTCGATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTT ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATTGGATGCATCTCGGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTTACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAATAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATGATCATCTTTCAAACTCTAATGTTCTACCTCATTCTATTTGAAAACAAAAAACATATGCTAAAAAGACTCGTGTTGATTCGATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTT ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATTGGATGCATCTCGGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTTACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAATAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATGATCATCTTTCAAACTCTAATGTTCTACCTCATTCTATTTGA MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNLQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDDHLSNSNVLPHSI
BLAST of CmaCh11G009410 vs. Swiss-Prot
Match: RIC4_ARATH (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana GN=RIC4 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-22 Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of CmaCh11G009410 vs. Swiss-Prot
Match: RIC2_ARATH (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana GN=RIC2 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.2e-09 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TrEMBL
Match: A0A0A0LY31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658520 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 1.9e-53 Identity = 124/182 (68.13%), Postives = 134/182 (73.63%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TrEMBL
Match: B9N155_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08440g PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32 Identity = 82/151 (54.30%), Postives = 100/151 (66.23%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TrEMBL
Match: B9RM87_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1078570 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 7.2e-32 Identity = 86/161 (53.42%), Postives = 106/161 (65.84%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TrEMBL
Match: A9P8G4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08050g PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 9.4e-32 Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TrEMBL
Match: I1N3Y7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G241600 PE=4 SV=2) HSP 1 Score: 142.9 bits (359), Expect = 3.6e-31 Identity = 82/162 (50.62%), Postives = 109/162 (67.28%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TAIR10
Match: AT5G16490.1 (AT5G16490.1 ROP-interactive CRIB motif-containing protein 4) HSP 1 Score: 107.5 bits (267), Expect = 8.4e-24 Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TAIR10
Match: AT1G27380.2 (AT1G27380.2 ROP-interactive CRIB motif-containing protein 2) HSP 1 Score: 62.0 bits (149), Expect = 4.0e-10 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein) HSP 1 Score: 49.3 bits (116), Expect = 2.7e-06 Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1
BLAST of CmaCh11G009410 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10) HSP 1 Score: 47.8 bits (112), Expect = 7.9e-06 Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1
BLAST of CmaCh11G009410 vs. NCBI nr
Match: gi|659085987|ref|XP_008443709.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis melo]) HSP 1 Score: 219.2 bits (557), Expect = 5.6e-54 Identity = 124/182 (68.13%), Postives = 133/182 (73.08%), Query Frame = 1
BLAST of CmaCh11G009410 vs. NCBI nr
Match: gi|449442675|ref|XP_004139106.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X2 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 2.8e-53 Identity = 124/182 (68.13%), Postives = 134/182 (73.63%), Query Frame = 1
BLAST of CmaCh11G009410 vs. NCBI nr
Match: gi|659085975|ref|XP_008443702.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo]) HSP 1 Score: 213.0 bits (541), Expect = 4.0e-52 Identity = 123/183 (67.21%), Postives = 132/183 (72.13%), Query Frame = 1
BLAST of CmaCh11G009410 vs. NCBI nr
Match: gi|778664127|ref|XP_011660226.1| (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51 Identity = 123/183 (67.21%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of CmaCh11G009410 vs. NCBI nr
Match: gi|743941278|ref|XP_011015124.1| (PREDICTED: CRIB domain-containing protein RIC4-like [Populus euphratica]) HSP 1 Score: 150.2 bits (378), Expect = 3.2e-33 Identity = 83/151 (54.97%), Postives = 101/151 (66.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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