Cucsa.343280 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.343280
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Plastocyanin
Location	scaffold03356 : 5519665 .. 5520528 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCACACATTGCTCATCCATTCACTCCCAATCCCAAAACCACACAAAAATATCAAATCAATCTCTTTCCCTTTTCCTTATATACCACTTTCTCCTCTCTTCTCCTCTTTGATTATTACCCACAAATATCCCCAATTTTCTTACAACCATGGCCGCTGTCACCTCCGCCGCCGTCGCTATCCCTTCCTTCACCGGCCTCAAGTCCACATCCTCCTCCAAACCCACCTCACTCATCCGCCTCCCTTCCCCTGCATCCCCAAAGCTATGCATCAAAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCTGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGGGACGACGGTTCTCTGGCATTCGTTCCGAACAATTTCACGGTGGCGTCGGGGGAGAAAATCACGTTCAAGAACAACGCGGGATTCCCACACAACGTAGTGTTCGATGAGGATGAAATTCCGAGCGGAGTTGATGTGGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAACGCTCCCGGAGAGGTTTATGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGCGCTGGAATGGTTGGAAAAGTTACGGTTAATTGATGATCCCATCCATTCCATTTTTCTATGTAATGTTCTTTCTTTTTTTATTTAATGTATAATAATTTTAAAGTTGAATGTCTTTGGTTTTCCTCTTCCACTCAGAGACTGTATGGCCGTAGAGCTCATAAATGGAGATTTAATAATTCACTAATGATGTAAATGGTATTTGTTGTCGTTGTTCTCTATGCCTTTTCCTCGTCGGCTTCCTTTCTGAC

mRNA sequence

AGCCACACATTGCTCATCCATTCACTCCCAATCCCAAAACCACACAAAAATATCAAATCAATCTCTTTCCCTTTTCCTTATATACCACTTTCTCCTCTCTTCTCCTCTTTGATTATTACCCACAAATATCCCCAATTTTCTTACAACCATGGCCGCTGTCACCTCCGCCGCCGTCGCTATCCCTTCCTTCACCGGCCTCAAGTCCACATCCTCCTCCAAACCCACCTCACTCATCCGCCTCCCTTCCCCTGCATCCCCAAAGCTATGCATCAAAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCTGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGGGACGACGGTTCTCTGGCATTCGTTCCGAACAATTTCACGGTGGCGTCGGGGGAGAAAATCACGTTCAAGAACAACGCGGGATTCCCACACAACGTAGTGTTCGATGAGGATGAAATTCCGAGCGGAGTTGATGTGGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAACGCTCCCGGAGAGGTTTATGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGCGCTGGAATGGTTGGAAAAGTTACGGTTAATTGATGATCCCATCCATTCCATTTTTCTATGTAATGTTCTTTCtttttttatttaatgtataataattttaaaGTTGAATGTCTTTGGTTTTCCTCTTCCACTCAGAGACTGTATGGCCGTAGAGCTCATAAATGGAGATTTAATAATTCACTAATGATGTAAATGGTATTTGTTGTCGTTGTTCTCTATGCCTTTTCCTCGTCGGCTTCCTTTCTGAC

Coding sequence (CDS)

ATGGCCGCTGTCACCTCCGCCGCCGTCGCTATCCCTTCCTTCACCGGCCTCAAGTCCACATCCTCCTCCAAACCCACCTCACTCATCCGCCTCCCTTCCCCTGCATCCCCAAAGCTATGCATCAAAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCTGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGGGACGACGGTTCTCTGGCATTCGTTCCGAACAATTTCACGGTGGCGTCGGGGGAGAAAATCACGTTCAAGAACAACGCGGGATTCCCACACAACGTAGTGTTCGATGAGGATGAAATTCCGAGCGGAGTTGATGTGGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAACGCTCCCGGAGAGGTTTATGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGCGCTGGAATGGTTGGAAAAGTTACGGTTAATTGA

Protein sequence

MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN*

Homology

[Close]

BLAST of Cucsa.343280 vs. Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-63
Identity = 124/168 (73.81%), Postives = 144/168 (85.71%), Query Frame = 1


Query: 1   MAAV-TSAAVAIPSFTGLKSTSSSKPTSLIRLPSP-ASPKLCIKASLKDVGVAVAATAAS 60
           MA V +SAAVA+PSFTGLK++ S KPT+   +P+  A P+L +KASLK+VG AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
            LLA NAMA+E+LLGG DGSLAF+P +F+VASGE+I FKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
             KISM EE+LLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Cucsa.343280 vs. Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.8e-63
Identity = 124/170 (72.94%), Postives = 145/170 (85.29%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKS--TSSSKPTSLIRLPSPASP--KLCIKASLKDVGVAVAATA 60
           MA VTSAAVAIPSFTGLK+  +SSS+ ++       A+P  +L +KASLKDVG  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSG 120
            SA+LASNAMA+E+LLGGDDGSLAF+P NF+V++GEKITFKNNAGFPHNVVFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDVGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           VD  KISM EE+LLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of Cucsa.343280 vs. Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 3.8e-63
Identity = 123/167 (73.65%), Postives = 139/167 (83.23%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA+VTSA VAIPSFTGLK ST  S  T  I+  + ASPKL +K+SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
            LA NAMAIE+LLGG DGSLAF+PN+F++A GEKI FKNNAG+PHNVVFDEDEIPSGVDV
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISMDE++LLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of Cucsa.343280 vs. Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 4.3e-62
Identity = 119/168 (70.83%), Postives = 141/168 (83.93%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLK--STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAAS 60
           MA VTSAAV+IPSFTGLK  S S++K ++  ++ +   P+L IKAS+KDVG AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNAMAI++LLG DDGSLAFVP+ F+++ GEKI FKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
             KISM EE+LLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Cucsa.343280 vs. Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 118/168 (70.24%), Postives = 143/168 (85.12%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSS--KPTSLIRLPSPASPKLCIKASLKDVGVAVAATAAS 60
           MAAVTSAAV+IPSFTGLK+ S+S  K ++  ++ +   P+L IKASLK+VG AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNAMA+++LLG DDGSLAFVP+ F+V +GEKI FKNNAGFPHNV+FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           V KISM EE+LLNA GE +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of Cucsa.343280 vs. TrEMBL
Match: A0A0A0LE99_CUCSA (Plastocyanin OS=Cucumis sativus GN=Csa_3G875430 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 8.6e-86
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Cucsa.343280 vs. TrEMBL
Match: A0A0B2RGW1_GLYSO (Plastocyanin OS=Glycine soja GN=glysoja_013832 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.4e-66
Identity = 131/166 (78.92%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK+ S+ K ++ +++ +P + +L IKASLKDVGVAV ATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKA-SAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASAV 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIE+LLGGDDGSLAFVPNNF+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of Cucsa.343280 vs. TrEMBL
Match: I1JSY7_SOYBN (Plastocyanin OS=Glycine max GN=GLYMA_04G020300 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.4e-66
Identity = 131/166 (78.92%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK+ S+ K ++ +++ +P + +L IKASLKDVGVAV ATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKA-SAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASAV 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIE+LLGGDDGSLAFVPNNF+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of Cucsa.343280 vs. TrEMBL
Match: C6SZV4_SOYBN (Plastocyanin OS=Glycine max PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.7e-65
Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK+ S+   ++ +++ +P + +L IKASLKDVGVAV ATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKA-SAGIVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASAV 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIE+LLGGDDGSLAFVPNNF+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of Cucsa.343280 vs. TrEMBL
Match: M5XH36_PRUPE (Plastocyanin OS=Prunus persica GN=PRUPE_ppa012521mg PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 129/167 (77.25%), Postives = 146/167 (87.43%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLC-IKASLKDVGVAVAATAASA 60
           MA VT AAVAIPSF GLKS  +SK  S   +   ASP++C IK+SLKDVGVAVAATAASA
Sbjct: 1   MATVTPAAVAIPSFAGLKSAGASKVCS-AAVKFAASPRMCAIKSSLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
           +LASNA+AIE+LLGGDDGSLAF+PN+F+V+ GEKI FKNNAGFPHN+VFDEDEIPSGVD 
Sbjct: 61  ILASNALAIEVLLGGDDGSLAFIPNSFSVSPGEKIVFKNNAGFPHNIVFDEDEIPSGVDA 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM EE+LLNAPGE Y + LTEKGSY+FYCSPHQGAGM+GKVTVN
Sbjct: 121 GKISMGEEDLLNAPGETYAITLTEKGSYAFYCSPHQGAGMIGKVTVN 166

[Close]

BLAST of Cucsa.343280 vs. TAIR10
Match: AT1G20340.1 (AT1G20340.1 Cupredoxin superfamily protein)

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-64
Identity = 123/167 (73.65%), Postives = 139/167 (83.23%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA+VTSA VAIPSFTGLK ST  S  T  I+  + ASPKL +K+SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
            LA NAMAIE+LLGG DGSLAF+PN+F++A GEKI FKNNAG+PHNVVFDEDEIPSGVDV
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISMDE++LLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of Cucsa.343280 vs. TAIR10
Match: AT1G76100.1 (AT1G76100.1 plastocyanin 1)

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-62
Identity = 121/170 (71.18%), Postives = 132/170 (77.65%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPAS-----PKLCIKASLKDVGVAVAAT 60
           MAA+TSA V IPSFTGLK   SSKP +L  +    S     PKL +K+SLKD GV   AT
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 60

Query: 61  AASALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPS 120
           AAS +LA NAMA+E+LLG DDGSLAFVP+ FTVA GEKI FKNNAGFPHNVVFDEDEIPS
Sbjct: 61  AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPS 120

Query: 121 GVDVGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 166
           GVD  KISMDE  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 GVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

[Close]

BLAST of Cucsa.343280 vs. NCBI nr
Match: gi|449437172|ref|XP_004136366.1| (PREDICTED: plastocyanin [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Cucsa.343280 vs. NCBI nr
Match: gi|659132911|ref|XP_008466451.1| (PREDICTED: plastocyanin [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 3.1e-81
Identity = 158/166 (95.18%), Postives = 161/166 (96.99%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKS+SSSKPTS IRLPSPASPKL ++ASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGE I FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of Cucsa.343280 vs. NCBI nr
Match: gi|734406057|gb|KHN33826.1| (Plastocyanin, chloroplastic [Glycine soja])

HSP 1 Score: 258.8 bits (660), Expect = 6.3e-66
Identity = 131/166 (78.92%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK+ S+ K ++ +++ +P + +L IKASLKDVGVAV ATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKA-SAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASAV 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIE+LLGGDDGSLAFVPNNF+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of Cucsa.343280 vs. NCBI nr
Match: gi|351727559|ref|NP_001236653.1| (uncharacterized protein LOC100306554 [Glycine max])

HSP 1 Score: 255.8 bits (652), Expect = 5.4e-65
Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK+ S+   ++ +++ +P + +L IKASLKDVGVAV ATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKA-SAGIVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASAV 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIE+LLGGDDGSLAFVPNNF+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of Cucsa.343280 vs. NCBI nr
Match: gi|596197493|ref|XP_007223602.1| (hypothetical protein PRUPE_ppa012521mg [Prunus persica])

HSP 1 Score: 255.0 bits (650), Expect = 9.2e-65
Identity = 129/167 (77.25%), Postives = 146/167 (87.43%), Query Frame = 1


Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLC-IKASLKDVGVAVAATAASA 60
           MA VT AAVAIPSF GLKS  +SK  S   +   ASP++C IK+SLKDVGVAVAATAASA
Sbjct: 1   MATVTPAAVAIPSFAGLKSAGASKVCS-AAVKFAASPRMCAIKSSLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
           +LASNA+AIE+LLGGDDGSLAF+PN+F+V+ GEKI FKNNAGFPHN+VFDEDEIPSGVD 
Sbjct: 61  ILASNALAIEVLLGGDDGSLAFIPNSFSVSPGEKIVFKNNAGFPHNIVFDEDEIPSGVDA 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM EE+LLNAPGE Y + LTEKGSY+FYCSPHQGAGM+GKVTVN
Sbjct: 121 GKISMGEEDLLNAPGETYAITLTEKGSYAFYCSPHQGAGMIGKVTVN 166

The following BLAST results are available for this feature:

BLAST of Cucsa.343280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLAS_SPIOL	1.0e-63	73.81	Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2	[more]
PLAS_SOLLC	3.8e-63	72.94	Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1	[more]
PLAS2_ARATH	3.8e-63	73.65	Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1...	[more]
PLAS1_POPNI	4.3e-62	70.83	Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	[more]
PLAS2_POPNI	1.6e-61	70.24	Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	[more]

BLAST of Cucsa.343280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE99_CUCSA	8.6e-86	100.00	Plastocyanin OS=Cucumis sativus GN=Csa_3G875430 PE=3 SV=1	[more]
A0A0B2RGW1_GLYSO	4.4e-66	78.92	Plastocyanin OS=Glycine soja GN=glysoja_013832 PE=3 SV=1	[more]
I1JSY7_SOYBN	4.4e-66	78.92	Plastocyanin OS=Glycine max GN=GLYMA_04G020300 PE=3 SV=1	[more]
C6SZV4_SOYBN	3.7e-65	78.31	Plastocyanin OS=Glycine max PE=2 SV=1	[more]
M5XH36_PRUPE	6.4e-65	77.25	Plastocyanin OS=Prunus persica GN=PRUPE_ppa012521mg PE=3 SV=1	[more]

BLAST of Cucsa.343280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20340.1	2.2e-64	73.65	Cupredoxin superfamily protein	[more]
AT1G76100.1	3.5e-62	71.18	plastocyanin 1	[more]

BLAST of Cucsa.343280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437172\|ref\|XP_004136366.1\|	1.2e-85	100.00	PREDICTED: plastocyanin [Cucumis sativus]	[more]
gi\|659132911\|ref\|XP_008466451.1\|	3.1e-81	95.18	PREDICTED: plastocyanin [Cucumis melo]	[more]
gi\|734406057\|gb\|KHN33826.1\|	6.3e-66	78.92	Plastocyanin, chloroplastic [Glycine soja]	[more]
gi\|351727559\|ref\|NP_001236653.1\|	5.4e-65	78.31	uncharacterized protein LOC100306554 [Glycine max]	[more]
gi\|596197493\|ref\|XP_007223602.1\|	9.2e-65	77.25	hypothetical protein PRUPE_ppa012521mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000923	BlueCu_1
IPR001235	Copper_blue_Plastocyanin
IPR002387	Plastocyanin
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0008150	biological_process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0009744	response to sucrose
biological_process	GO:0010114	response to red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009932	cell tip growth
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009637	response to blue light
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009657	plastid organization
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0055035	plastid thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.343280.1	Cucsa.343280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 69..166 score: 1.8
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 143..157 score: 1.5E-14coord: 87..100 score: 1.5E-14coord: 102..117 score: 1.5
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 145..164 score: 2.1E-34coord: 96..114 score: 2.1E-34coord: 73..92 score: 2.1
IPR002387	Plastocyanin	TIGRFAMs	TIGR02656	TIGR02656	coord: 68..166 score: 4.7
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 70..166 score: 1.3
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 65..166 score: 3.0
None	No IPR available	PANTHER	PTHR34192	FAMILY NOT NAMED	coord: 1..166 score: 4.2
None	No IPR available	PANTHER	PTHR34192:SF2	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..166 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.343280	Cla007419	Watermelon (97103) v1	cgywmB616
Cucsa.343280	Csa3G875430	Cucumber (Chinese Long) v2	cgycuB478
Cucsa.343280	MELO3C003725	Melon (DHL92) v3.5.1	cgymeB559
Cucsa.343280	ClCG05G015390	Watermelon (Charleston Gray)	cgywcgB586
Cucsa.343280	CSPI03G43700	Wild cucumber (PI 183967)	cgycpiB504
Cucsa.343280	CmaCh09G000820	Cucurbita maxima (Rimu)	cgycmaB0920
Cucsa.343280	CmoCh09G000810	Cucurbita moschata (Rifu)	cgycmoB0920
Cucsa.343280	Lsi04G017810	Bottle gourd (USVL1VR-Ls)	cgylsiB552
Cucsa.343280	Cp4.1LG06g00360	Cucurbita pepo (Zucchini)	cgycpeB0896
Cucsa.343280	MELO3C003725.2	Melon (DHL92) v3.6.1	cgymedB560
Cucsa.343280	CsaV3_3G046150	Cucumber (Chinese Long) v3	cgycucB523
Cucsa.343280	Cla97C05G096440	Watermelon (97103) v2	cgywmbB586
Cucsa.343280	Carg08654	Silver-seed gourd	carcgyB0126

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None