Cla97C05G096440 (gene) Watermelon (97103) v2

Overview
NameCla97C05G096440
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPlastocyanin
LocationCla97Chr05 : 25258785 .. 25259288 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGTCACCTCCGCCGCCGTTGCCATCCCCTCCTTCACCGGCCTCAAGTCCGCCGGCGCCACATCAAAACCCACCGCGGCCGTCCGCGTCTCCTCCCCTGCAACCCCAAAGCTGAGCATGAGAGCATCTCTGAAGGACGTGGGCGTGGCCGTGGCAGCCACCGCCGCCACCGCCCTGCTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGCGGCAACGACGGATCTCTGGCGTTCGTTCCGAACGATTTCTCGGTGGCGTCGGGTGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGGTGTTCGATGAGGACGAAATCCCGAGCGGAGTGGACGCGGGAAAGATCTCGATGAGTGAGGAAGATCTTCTGAATGCTCCCGGCCAGGTGTACGAAGTCCAGCTAACTGAAAAAGGAAGCTACTCTTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGAAAGGTCACCGTTAACTGA

mRNA sequence

ATGGCCGCCGTCACCTCCGCCGCCGTTGCCATCCCCTCCTTCACCGGCCTCAAGTCCGCCGGCGCCACATCAAAACCCACCGCGGCCGTCCGCGTCTCCTCCCCTGCAACCCCAAAGCTGAGCATGAGAGCATCTCTGAAGGACGTGGGCGTGGCCGTGGCAGCCACCGCCGCCACCGCCCTGCTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGCGGCAACGACGGATCTCTGGCGTTCGTTCCGAACGATTTCTCGGTGGCGTCGGGTGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGGTGTTCGATGAGGACGAAATCCCGAGCGGAGTGGACGCGGGAAAGATCTCGATGAGTGAGGAAGATCTTCTGAATGCTCCCGGCCAGGTGTACGAAGTCCAGCTAACTGAAAAAGGAAGCTACTCTTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGAAAGGTCACCGTTAACTGA

Coding sequence (CDS)

ATGGCCGCCGTCACCTCCGCCGCCGTTGCCATCCCCTCCTTCACCGGCCTCAAGTCCGCCGGCGCCACATCAAAACCCACCGCGGCCGTCCGCGTCTCCTCCCCTGCAACCCCAAAGCTGAGCATGAGAGCATCTCTGAAGGACGTGGGCGTGGCCGTGGCAGCCACCGCCGCCACCGCCCTGCTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGCGGCAACGACGGATCTCTGGCGTTCGTTCCGAACGATTTCTCGGTGGCGTCGGGTGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGGTGTTCGATGAGGACGAAATCCCGAGCGGAGTGGACGCGGGAAAGATCTCGATGAGTGAGGAAGATCTTCTGAATGCTCCCGGCCAGGTGTACGAAGTCCAGCTAACTGAAAAAGGAAGCTACTCTTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGAAAGGTCACCGTTAACTGA

Protein sequence

MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Homology
[Close]
BLAST of Cla97C05G096440 vs. NCBI nr
Match: XP_022937324.1 (plastocyanin [Cucurbita moschata])

HSP 1 Score: 283.5 bits (724), Expect = 4.7e-73
Identity = 147/167 (88.02%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA VTSA VAIP+FTGLKS    SKPTAAVRVSSPA PKL++RASLKD+GVAVAATAA+A
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGG+DGSLAF+PNDFSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EEDLLNAPG+VYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]
BLAST of Cla97C05G096440 vs. NCBI nr
Match: XP_023534891.1 (plastocyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 8.0e-73
Identity = 148/167 (88.62%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA VTSA VAIPSFTGLKS+   SK TAAVRVSSPA PKL++RASLKDVGVAVAATAA+A
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTAAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGG+DGSLAF+PNDFSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EEDLLNAPG+VYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]
BLAST of Cla97C05G096440 vs. NCBI nr
Match: XP_008466451.1 (PREDICTED: plastocyanin [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 8.8e-72
Identity = 149/167 (89.22%), Postives = 163/167 (97.60%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MAAVTSAAVAIPSFTGLKS+ ++SKPT+A+R+ SPA+PKLS+RASLKDVGVAVAATAA+A
Sbjct: 1   MAAVTSAAVAIPSFTGLKSS-SSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNAMAIEILLGG+DGSLAFVPN+F+VASGE IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM EE+LLNAPG+VYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of Cla97C05G096440 vs. NCBI nr
Match: XP_022976282.1 (plastocyanin [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 8.8e-72
Identity = 145/167 (86.83%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA VTSA VAIPSFTGLK++   SK TAAVRVSSP+ PKL++RASLKD+GVAVAATAA+A
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGG+DGSLAF+PNDFSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EEDLLNAPG+VYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]
BLAST of Cla97C05G096440 vs. NCBI nr
Match: XP_004136366.1 (PREDICTED: plastocyanin [Cucumis sativus] >KGN60068.1 Plastocyanin A, chloroplast [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 6.3e-70
Identity = 145/167 (86.83%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MAAVTSAAVAIPSFTGLKS  ++SKPT+ +R+ SPA+PKL ++ASLKDVGVAVAATAA+A
Sbjct: 1   MAAVTSAAVAIPSFTGLKST-SSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNAMAIEILLGG+DGSLAFVPN+F+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM EE+LLNAPG+VYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of Cla97C05G096440 vs. TrEMBL
Match: tr|A0A1S3CRA6|A0A1S3CRA6_CUCME (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.8e-72
Identity = 149/167 (89.22%), Postives = 163/167 (97.60%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MAAVTSAAVAIPSFTGLKS+ ++SKPT+A+R+ SPA+PKLS+RASLKDVGVAVAATAA+A
Sbjct: 1   MAAVTSAAVAIPSFTGLKSS-SSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNAMAIEILLGG+DGSLAFVPN+F+VASGE IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM EE+LLNAPG+VYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of Cla97C05G096440 vs. TrEMBL
Match: tr|A0A0A0LE99|A0A0A0LE99_CUCSA (Plastocyanin OS=Cucumis sativus OX=3659 GN=Csa_3G875430 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-70
Identity = 145/167 (86.83%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MAAVTSAAVAIPSFTGLKS  ++SKPT+ +R+ SPA+PKL ++ASLKDVGVAVAATAA+A
Sbjct: 1   MAAVTSAAVAIPSFTGLKST-SSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNAMAIEILLGG+DGSLAFVPN+F+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM EE+LLNAPG+VYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of Cla97C05G096440 vs. TrEMBL
Match: tr|A0A2I4HBI7|A0A2I4HBI7_9ROSI (Plastocyanin OS=Juglans regia OX=51240 GN=LOC109015464 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-65
Identity = 138/168 (82.14%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATS-KPTAAVRVSSPATPKLSMRASLKDVGVAVAATAAT 60
           MA VTSAAVAIPSFTGLK+AGA     TA V  S+ A P+LS++ASLKDVGVAVAATAA+
Sbjct: 1   MATVTSAAVAIPSFTGLKAAGAAKVNATAKVSXSASAVPRLSIKASLKDVGVAVAATAAS 60

Query: 61  ALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           ALLASNAMAIE+LLG +DG LAFVPN FS++ GEKIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  ALLASNAMAIEVLLGSDDGGLAFVPNSFSISPGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           AGKISMSEEDLLN PG+ Y V LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 AGKISMSEEDLLNGPGETYAVTLTEKGSYSFYCSPHQGAGMVGKVTVN 168

[Close]
BLAST of Cla97C05G096440 vs. TrEMBL
Match: tr|A0A2P6PZB6|A0A2P6PZB6_ROSCH (Plastocyanin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0303721 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.3e-65
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA VT AAVAIPSFTGLKSAGAT     +V+VS+ A P++S+++SLKDVGVAVAATAA+A
Sbjct: 1   MATVTPAAVAIPSFTGLKSAGATKLGATSVKVSA-AVPRMSIKSSLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIEILLGG+DGSLAFVPN+FS++ G+KIVFKNNAGFPHNVVFDEDEIP GVDA
Sbjct: 61  LLASNALAIEILLGGSDGSLAFVPNEFSISPGDKIVFKNNAGFPHNVVFDEDEIPGGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMSEEDLLNAPG+ Y V LTEKG+YSFYCSPHQGAGM GKVTVN
Sbjct: 121 GKISMSEEDLLNAPGETYSVTLTEKGTYSFYCSPHQGAGMAGKVTVN 166

[Close]
BLAST of Cla97C05G096440 vs. TrEMBL
Match: tr|A0A2N9FLT7|A0A2N9FLT7_FAGSY (Plastocyanin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15942 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.6e-64
Identity = 135/167 (80.84%), Postives = 150/167 (89.82%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA VTSAAVAIPSFTGLK++GAT K  A  +VS    P+LS++ASLKDVGVAVAATAA+A
Sbjct: 1   MATVTSAAVAIPSFTGLKASGAT-KVCATAKVSVSPVPRLSIKASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNAMA+EILLGG+DGSLAFVPN FSVA GEKIVFKNNAGFPHNV+FDEDE+P GVDA
Sbjct: 61  ILASNAMALEILLGGDDGSLAFVPNSFSVAPGEKIVFKNNAGFPHNVIFDEDEVPGGVDA 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISMS+EDLLNAPG+ Y V LTEKGSY+FYCSPHQGAGMVGKVTVN
Sbjct: 121 TKISMSDEDLLNAPGETYAVTLTEKGSYTFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of Cla97C05G096440 vs. Swiss-Prot
Match: sp|P00289|PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 5.1e-63
Identity = 127/168 (75.60%), Postives = 146/168 (86.90%), Query Frame = 0 

Query: 1   MAAV-TSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAAT 60
           MA V +SAAVA+PSFTGLK++G+    TA +  ++ A P+LS++ASLK+VG AV ATAA 
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
            LLA NAMA+E+LLGG DGSLAF+P DFSVASGE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISMSEEDLLNAPG+ Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]
BLAST of Cla97C05G096440 vs. Swiss-Prot
Match: sp|P42699|PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT112 PE=1 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 5.3e-60
Identity = 118/167 (70.66%), Postives = 140/167 (83.83%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA+VTSA VAIPSFTGLK++   S  T  ++ ++ A+PKL++++SLK+ GVA  A AA+ 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NAMAIE+LLGG DGSLAF+PNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM E+DLLN  G+ YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]
BLAST of Cla97C05G096440 vs. Swiss-Prot
Match: sp|P00299|PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 231.1 bits (588), Expect = 9.0e-60
Identity = 120/168 (71.43%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGAT-SKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAAT 60
           MA VTSAAV+IPSFTGLK+  A+ +K +A+    +   P+LS++AS+KDVG AV ATAA+
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAXXXASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNAMAI++LLG +DGSLAFVP++FS++ GEKIVFKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 AGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISMSEEDLLNA G+ +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]
BLAST of Cla97C05G096440 vs. Swiss-Prot
Match: sp|P07030|PLAS_SILLB (Plastocyanin, chloroplastic OS=Silene latifolia subsp. alba OX=52853 GN=PETE PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 6.5e-58
Identity = 121/168 (72.02%), Postives = 137/168 (81.55%), Query Frame = 0 

Query: 1   MAAVT-SAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAAT 60
           MA VT SAAVAIPSF GLK++  T   T  V V   ATP++S++ASLKDVGV VAATAA 
Sbjct: 1   MATVTSSAAVAIPSFAGLKASSTTRAATVKVAV---ATPRMSIKASLKDVGVVVAATAAA 60

Query: 61  ALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
            +LA NAMA E+LLG +DG LAFVP+D S+ASGEKI FKNNAGFPHNVVFDEDE+P+GVD
Sbjct: 61  GILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVD 120

Query: 121 AGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
             KISM EEDLLNAPG+ Y V LTEKG+Y FYC+PH GAGMVGKVTVN
Sbjct: 121 VTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165

[Close]
BLAST of Cla97C05G096440 vs. Swiss-Prot
Match: sp|P11970|PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-57
Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGAT-SKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAAT 60
           MAAVTSAAV+IPSFTGLK+A A+ +K            P+LS++ASLK+VG AV ATAA+
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVXXXXXXXXXPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNAMA+++LLG +DGSLAFVP++FSV +GEKIVFKNNAGFPHNV+FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 AGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
             KISMSEEDLLNA G+ +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]
BLAST of Cla97C05G096440 vs. TAIR10
Match: AT1G20340.1 (Cupredoxin superfamily protein)

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-61
Identity = 118/167 (70.66%), Postives = 140/167 (83.83%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVSSPATPKLSMRASLKDVGVAVAATAATA 60
           MA+VTSA VAIPSFTGLK++   S  T  ++ ++ A+PKL++++SLK+ GVA  A AA+ 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NAMAIE+LLGG DGSLAF+PNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM E+DLLN  G+ YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]
BLAST of Cla97C05G096440 vs. TAIR10
Match: AT1G76100.1 (plastocyanin 1)

HSP 1 Score: 214.5 bits (545), Expect = 4.8e-56
Identity = 117/171 (68.42%), Postives = 136/171 (79.53%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSAGATSKPTAAVRVS-----SPATPKLSMRASLKDVGVAVAA 60
           MAA+TSA V IPSFTGLK A  +SKP     +S     + A PKL++++SLKD GV   A
Sbjct: 1   MAAITSATVTIPSFTGLKLA-VSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVA 60

Query: 61  TAATALLASNAMAIEILLGGNDGSLAFVPNDFSVASGEKIVFKNNAGFPHNVVFDEDEIP 120
           TAA+ +LA NAMA+E+LLG +DGSLAFVP++F+VA GEKIVFKNNAGFPHNVVFDEDEIP
Sbjct: 61  TAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIP 120

Query: 121 SGVDAGKISMSEEDLLNAPGQVYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 167
           SGVDA KISM E  LLN  G+ YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 SGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:
BLAST of Cla97C05G096440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937324.14.7e-7388.02plastocyanin [Cucurbita moschata][more]
XP_023534891.18.0e-7388.62plastocyanin [Cucurbita pepo subsp. pepo][more]
XP_008466451.18.8e-7289.22PREDICTED: plastocyanin [Cucumis melo][more]
XP_022976282.18.8e-7286.83plastocyanin [Cucurbita maxima][more]
XP_004136366.16.3e-7086.83PREDICTED: plastocyanin [Cucumis sativus] >KGN60068.1 Plastocyanin A, chloroplas... [more]
BLAST of Cla97C05G096440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CRA6|A0A1S3CRA6_CUCME5.8e-7289.22Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1[more]
tr|A0A0A0LE99|A0A0A0LE99_CUCSA4.2e-7086.83Plastocyanin OS=Cucumis sativus OX=3659 GN=Csa_3G875430 PE=3 SV=1[more]
tr|A0A2I4HBI7|A0A2I4HBI7_9ROSI3.1e-6582.14Plastocyanin OS=Juglans regia OX=51240 GN=LOC109015464 PE=3 SV=1[more]
tr|A0A2P6PZB6|A0A2P6PZB6_ROSCH5.3e-6580.84Plastocyanin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0303721 PE=3 SV=1[more]
tr|A0A2N9FLT7|A0A2N9FLT7_FAGSY2.6e-6480.84Plastocyanin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15942 PE=3 SV=1[more]
BLAST of Cla97C05G096440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P00289|PLAS_SPIOL5.1e-6375.60Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2[more]
sp|P42699|PLAS2_ARATH5.3e-6070.66Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT... [more]
sp|P00299|PLAS1_POPNI9.0e-6071.43Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2[more]
sp|P07030|PLAS_SILLB6.5e-5872.02Plastocyanin, chloroplastic OS=Silene latifolia subsp. alba OX=52853 GN=PETE PE=... [more]
sp|P11970|PLAS2_POPNI2.5e-5769.64Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2[more]
BLAST of Cla97C05G096440 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20340.12.9e-6170.66Cupredoxin superfamily protein[more]
AT1G76100.14.8e-5668.42plastocyanin 1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR028871BlueCu_1_BS
IPR008972Cupredoxin
IPR000923BlueCu_1
IPR002387Plastocyanin
IPR001235Copper_blue_Plastocyanin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0017148 negative regulation of translation
biological_process GO:0008150 biological_process
biological_process GO:0048767 root hair elongation
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010218 response to far red light
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009657 plastid organization
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0055070 copper ion homeostasis
biological_process GO:0071555 cell wall organization
biological_process GO:0009932 cell tip growth
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0009965 leaf morphogenesis
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0055035 plastid thylakoid membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009579 thylakoid
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005507 copper ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G096440.1Cla97C05G096440.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001235Blue (type 1) copper protein, plastocyanin-typePRINTSPR00156COPPERBLUEcoord: 144..158
score: 51.99
coord: 88..101
score: 40.18
coord: 103..118
score: 55.62
IPR002387PlastocyaninPRINTSPR00157PLASTOCYANINcoord: 74..93
score: 59.63
coord: 97..115
score: 83.95
coord: 146..165
score: 80.37
IPR002387PlastocyaninTIGRFAMTIGR02656TIGR02656coord: 69..167
e-value: 1.8E-41
score: 138.5
IPR002387PlastocyaninCDDcd04219Plastocyanincoord: 69..167
e-value: 1.25587E-46
score: 148.671
IPR000923Blue (type 1) copper domainPFAMPF00127Copper-bindcoord: 70..167
e-value: 6.5E-34
score: 116.2
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 69..167
e-value: 4.1E-27
score: 96.8
IPR008972CupredoxinSUPERFAMILYSSF49503Cupredoxinscoord: 66..167
NoneNo IPR availablePANTHERPTHR34192:SF2PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATEDcoord: 1..167
NoneNo IPR availablePANTHERPTHR34192FAMILY NOT NAMEDcoord: 1..167
IPR028871Blue (type 1) copper protein, binding sitePROSITEPS00196COPPER_BLUEcoord: 146..160

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G096440Cla007419Watermelon (97103) v1wmwmbB207
Cla97C05G096440Csa3G875430Cucumber (Chinese Long) v2cuwmbB221
Cla97C05G096440MELO3C003725Melon (DHL92) v3.5.1mewmbB333
Cla97C05G096440ClCG05G015390Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G096440CSPI03G43700Wild cucumber (PI 183967)cpiwmbB227
Cla97C05G096440Cucsa.343280Cucumber (Gy14) v1cgywmbB586
Cla97C05G096440CmaCh09G000820Cucurbita maxima (Rimu)cmawmbB029
Cla97C05G096440CmoCh09G000810Cucurbita moschata (Rifu)cmowmbB017
Cla97C05G096440Lsi04G017810Bottle gourd (USVL1VR-Ls)lsiwmbB291
Cla97C05G096440CsGy3G041220Cucumber (Gy14) v2cgybwmbB211
Cla97C05G096440MELO3C003725.2Melon (DHL92) v3.6.1medwmbB320
Cla97C05G096440Carg08654Silver-seed gourdcarwmbB0108
Cla97C05G096440CsaV3_3G046150Cucumber (Chinese Long) v3cucwmbB222
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G096440Cucurbita maxima (Rimu)cmawmbB483
Cla97C05G096440Cucurbita moschata (Rifu)cmowmbB464