CsGy3G041220 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G041220
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPlastocyanin
LocationChr3 : 38544553 .. 38545053 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTGTCACCTCCGCCGCCGTCGCTATCCCTTCCTTCACCGGCCTCAAGTCCACATCCTCCTCCAAACCCACCTCACTCATCCGCCTCCCTTCCCCTGCATCCCCAAAGCTATGCATCAAAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCTGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGGGACGACGGTTCTCTGGCATTCGTTCCGAACAATTTCACGGTGGCGTCGGGGGAGAAAATCACGTTCAAGAACAACGCGGGATTCCCACACAACGTAGTGTTCGATGAGGATGAAATTCCGAGCGGAGTTGATGTGGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAACGCTCCCGGAGAGGTTTATGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGCGCTGGAATGGTTGGAAAAGTTACGGTTAATTGA

mRNA sequence

ATGGCCGCTGTCACCTCCGCCGCCGTCGCTATCCCTTCCTTCACCGGCCTCAAGTCCACATCCTCCTCCAAACCCACCTCACTCATCCGCCTCCCTTCCCCTGCATCCCCAAAGCTATGCATCAAAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCTGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGGGACGACGGTTCTCTGGCATTCGTTCCGAACAATTTCACGGTGGCGTCGGGGGAGAAAATCACGTTCAAGAACAACGCGGGATTCCCACACAACGTAGTGTTCGATGAGGATGAAATTCCGAGCGGAGTTGATGTGGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAACGCTCCCGGAGAGGTTTATGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGCGCTGGAATGGTTGGAAAAGTTACGGTTAATTGA

Coding sequence (CDS)

ATGGCCGCTGTCACCTCCGCCGCCGTCGCTATCCCTTCCTTCACCGGCCTCAAGTCCACATCCTCCTCCAAACCCACCTCACTCATCCGCCTCCCTTCCCCTGCATCCCCAAAGCTATGCATCAAAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCTGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGGGACGACGGTTCTCTGGCATTCGTTCCGAACAATTTCACGGTGGCGTCGGGGGAGAAAATCACGTTCAAGAACAACGCGGGATTCCCACACAACGTAGTGTTCGATGAGGATGAAATTCCGAGCGGAGTTGATGTGGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAACGCTCCCGGAGAGGTTTATGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGCGCTGGAATGGTTGGAAAAGTTACGGTTAATTGA

Protein sequence

MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Homology
[Close]
BLAST of CsGy3G041220 vs. NCBI nr
Match: XP_004136366.1 (PREDICTED: plastocyanin [Cucumis sativus] >KGN60068.1 Plastocyanin A, chloroplast [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 5.5e-82
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of CsGy3G041220 vs. NCBI nr
Match: XP_008466451.1 (PREDICTED: plastocyanin [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 1.4e-77
Identity = 158/166 (95.18%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKS+SSSKPTS IRLPSPASPKL ++ASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGE I FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of CsGy3G041220 vs. NCBI nr
Match: XP_022937324.1 (plastocyanin [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 1.5e-68
Identity = 139/167 (83.23%), Postives = 156/167 (93.41%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKS-TSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA VTSA VAIP+FTGLKS  ++SKPT+ +R+ SPA PKL ++ASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]
BLAST of CsGy3G041220 vs. NCBI nr
Match: XP_023534891.1 (plastocyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 3.4e-68
Identity = 140/167 (83.83%), Postives = 156/167 (93.41%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKST-SSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA VTSA VAIPSFTGLKS+ ++SK T+ +R+ SPA PKL ++ASLKDVGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTAAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]
BLAST of CsGy3G041220 vs. NCBI nr
Match: XP_022976282.1 (plastocyanin [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 138/167 (82.63%), Postives = 155/167 (92.81%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S ++SK T+ +R+ SP+ PKL ++ASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]
BLAST of CsGy3G041220 vs. TAIR10
Match: AT1G20340.1 (Cupredoxin superfamily protein)

HSP 1 Score: 231.1 bits (588), Expect = 5.0e-61
Identity = 123/167 (73.65%), Postives = 139/167 (83.23%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA+VTSA VAIPSFTGLK ST  S  T  I+  + ASPKL +K+SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
            LA NAMAIE+LLGG DGSLAF+PN+F++A GEKI FKNNAG+PHNVVFDEDEIPSGVDV
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISMDE++LLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]
BLAST of CsGy3G041220 vs. TAIR10
Match: AT1G76100.1 (plastocyanin 1)

HSP 1 Score: 223.8 bits (569), Expect = 7.9e-59
Identity = 121/170 (71.18%), Postives = 133/170 (78.24%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRL-----PSPASPKLCIKASLKDVGVAVAAT 60
           MAA+TSA V IPSFTGLK   SSKP +L  +      + A PKL +K+SLKD GV   AT
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 60

Query: 61  AASALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPS 120
           AAS +LA NAMA+E+LLG DDGSLAFVP+ FTVA GEKI FKNNAGFPHNVVFDEDEIPS
Sbjct: 61  AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPS 120

Query: 121 GVDVGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 166
           GVD  KISMDE  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 GVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

[Close]
BLAST of CsGy3G041220 vs. Swiss-Prot
Match: sp|P00289|PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 2.4e-60
Identity = 124/168 (73.81%), Postives = 144/168 (85.71%), Query Frame = 0 

Query: 1   MAAV-TSAAVAIPSFTGLKSTSSSKPTSLIRLP-SPASPKLCIKASLKDVGVAVAATAAS 60
           MA V +SAAVA+PSFTGLK++ S KPT+   +P + A P+L +KASLK+VG AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
            LLA NAMA+E+LLGG DGSLAF+P +F+VASGE+I FKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
             KISM EE+LLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]
BLAST of CsGy3G041220 vs. Swiss-Prot
Match: sp|P42699|PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT112 PE=1 SV=2)

HSP 1 Score: 231.1 bits (588), Expect = 9.0e-60
Identity = 123/167 (73.65%), Postives = 139/167 (83.23%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60
           MA+VTSA VAIPSFTGLK ST  S  T  I+  + ASPKL +K+SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120
            LA NAMAIE+LLGG DGSLAF+PN+F++A GEKI FKNNAG+PHNVVFDEDEIPSGVDV
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            KISMDE++LLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]
BLAST of CsGy3G041220 vs. Swiss-Prot
Match: sp|P00299|PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 3.8e-58
Identity = 119/168 (70.83%), Postives = 139/168 (82.74%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLK--STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAAS 60
           MA VTSAAV+IPSFTGLK  S S++K ++     +   P+L IKAS+KDVG AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAXXXASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNAMAI++LLG DDGSLAFVP+ F+++ GEKI FKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
             KISM EE+LLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]
BLAST of CsGy3G041220 vs. Swiss-Prot
Match: sp|P11490|PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PETE PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-57
Identity = 121/170 (71.18%), Postives = 133/170 (78.24%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRL-----PSPASPKLCIKASLKDVGVAVAAT 60
           MAA+TSA V IPSFTGLK   SSKP +L  +      + A PKL +K+SLKD GV   AT
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 60

Query: 61  AASALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPS 120
           AAS +LA NAMA+E+LLG DDGSLAFVP+ FTVA GEKI FKNNAGFPHNVVFDEDEIPS
Sbjct: 61  AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPS 120

Query: 121 GVDVGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 166
           GVD  KISMDE  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 GVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

[Close]
BLAST of CsGy3G041220 vs. Swiss-Prot
Match: sp|P16002|PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-57
Identity = 113/168 (67.26%), Postives = 141/168 (83.93%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPA--SPKLCIKASLKDVGVAVAATAAS 60
           MA VTS  VAIPSF+GLK+ +++K +++ ++P+    SP+LC++ASLKD GVA+ ATAAS
Sbjct: 1   MATVTSTTVAIPSFSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAAS 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
           A+LASNA+A+E+LLG  DG LAFVP++  V++GE I FKNNAGFPHNVVFDEDEIP+GVD
Sbjct: 61  AVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
             KISM EE+LLNAPGE Y V+L  KG+Y FYCSPHQGAGMVG+VTVN
Sbjct: 121 ASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168

[Close]
BLAST of CsGy3G041220 vs. TrEMBL
Match: tr|A0A0A0LE99|A0A0A0LE99_CUCSA (Plastocyanin OS=Cucumis sativus OX=3659 GN=Csa_3G875430 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.6e-82
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of CsGy3G041220 vs. TrEMBL
Match: tr|A0A1S3CRA6|A0A1S3CRA6_CUCME (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 9.2e-78
Identity = 158/166 (95.18%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MAAVTSAAVAIPSFTGLKS+SSSKPTS IRLPSPASPKL ++ASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIEILLGGDDGSLAFVPNNFTVASGE I FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]
BLAST of CsGy3G041220 vs. TrEMBL
Match: tr|I1JSY7|I1JSY7_SOYBN (Plastocyanin OS=Glycine max OX=3847 GN=GLYMA_04G020300 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62
Identity = 131/166 (78.92%), Postives = 148/166 (89.16%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK+ S+ K ++ +++ +P + +L IKASLKDVGVAV ATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKA-SAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASAV 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMAIE+LLGGDDGSLAFVPNNF+VASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]
BLAST of CsGy3G041220 vs. TrEMBL
Match: tr|A0A2I4HBI7|A0A2I4HBI7_9ROSI (Plastocyanin OS=Juglans regia OX=51240 GN=LOC109015464 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-62
Identity = 132/168 (78.57%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSK--PTSLIRLPSPASPKLCIKASLKDVGVAVAATAAS 60
           MA VTSAAVAIPSFTGLK+  ++K   T+ +   + A P+L IKASLKDVGVAVAATAAS
Sbjct: 1   MATVTSAAVAIPSFTGLKAAGAAKVNATAKVSXSASAVPRLSIKASLKDVGVAVAATAAS 60

Query: 61  ALLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVD 120
           ALLASNAMAIE+LLG DDG LAFVPN+F+++ GEKI FKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  ALLASNAMAIEVLLGSDDGGLAFVPNSFSISPGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 VGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
            GKISM EE+LLN PGE Y V LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 AGKISMSEEDLLNGPGETYAVTLTEKGSYSFYCSPHQGAGMVGKVTVN 168

[Close]
BLAST of CsGy3G041220 vs. TrEMBL
Match: tr|A0A2N9FLT7|A0A2N9FLT7_FAGSY (Plastocyanin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15942 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.1e-62
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 0 

Query: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60
           MA VTSAAVAIPSFTGLK++ ++K  +  ++     P+L IKASLKDVGVAVAATAASA+
Sbjct: 1   MATVTSAAVAIPSFTGLKASGATKVCATAKVSVSPVPRLSIKASLKDVGVAVAATAASAI 60

Query: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120
           LASNAMA+EILLGGDDGSLAFVPN+F+VA GEKI FKNNAGFPHNV+FDEDE+P GVD  
Sbjct: 61  LASNAMALEILLGGDDGSLAFVPNSFSVAPGEKIVFKNNAGFPHNVIFDEDEVPGGVDAT 120

Query: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           KISM +E+LLNAPGE Y V LTEKGSY+FYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMSDEDLLNAPGETYAVTLTEKGSYTFYCSPHQGAGMVGKVTVN 166

The following BLAST results are available for this feature:
BLAST of CsGy3G041220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136366.15.5e-82100.00PREDICTED: plastocyanin [Cucumis sativus] >KGN60068.1 Plastocyanin A, chloroplas... [more]
XP_008466451.11.4e-7795.18PREDICTED: plastocyanin [Cucumis melo][more]
XP_022937324.11.5e-6883.23plastocyanin [Cucurbita moschata][more]
XP_023534891.13.4e-6883.83plastocyanin [Cucurbita pepo subsp. pepo][more]
XP_022976282.12.2e-6782.63plastocyanin [Cucurbita maxima][more]
BLAST of CsGy3G041220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20340.15.0e-6173.65Cupredoxin superfamily protein[more]
AT1G76100.17.9e-5971.18plastocyanin 1[more]
BLAST of CsGy3G041220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P00289|PLAS_SPIOL2.4e-6073.81Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2[more]
sp|P42699|PLAS2_ARATH9.0e-6073.65Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT... [more]
sp|P00299|PLAS1_POPNI3.8e-5870.83Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2[more]
sp|P11490|PLAS1_ARATH1.4e-5771.18Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PET... [more]
sp|P16002|PLAS_PEA1.4e-5767.26Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1[more]
BLAST of CsGy3G041220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LE99|A0A0A0LE99_CUCSA3.6e-82100.00Plastocyanin OS=Cucumis sativus OX=3659 GN=Csa_3G875430 PE=3 SV=1[more]
tr|A0A1S3CRA6|A0A1S3CRA6_CUCME9.2e-7895.18Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1[more]
tr|I1JSY7|I1JSY7_SOYBN1.4e-6278.92Plastocyanin OS=Glycine max OX=3847 GN=GLYMA_04G020300 PE=3 SV=1[more]
tr|A0A2I4HBI7|A0A2I4HBI7_9ROSI2.4e-6278.57Plastocyanin OS=Juglans regia OX=51240 GN=LOC109015464 PE=3 SV=1[more]
tr|A0A2N9FLT7|A0A2N9FLT7_FAGSY7.1e-6277.11Plastocyanin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15942 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR028871BlueCu_1_BS
IPR008972Cupredoxin
IPR000923BlueCu_1
IPR002387Plastocyanin
IPR001235Copper_blue_Plastocyanin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005507 copper ion binding
molecular_function GO:0009055 electron carrier activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G041220.1CsGy3G041220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001235Blue (type 1) copper protein, plastocyanin-typePRINTSPR00156COPPERBLUEcoord: 143..157
score: 51.99
coord: 87..100
score: 43.38
coord: 102..117
score: 55.62
IPR002387PlastocyaninPRINTSPR00157PLASTOCYANINcoord: 145..164
score: 80.37
coord: 96..114
score: 83.95
coord: 73..92
score: 62.44
IPR002387PlastocyaninTIGRFAMTIGR02656TIGR02656coord: 68..166
e-value: 4.7E-42
score: 140.4
IPR002387PlastocyaninCDDcd04219Plastocyanincoord: 68..166
e-value: 5.43804E-48
score: 152.138
IPR000923Blue (type 1) copper domainPFAMPF00127Copper-bindcoord: 69..166
e-value: 1.9E-34
score: 118.0
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 68..166
e-value: 4.1E-28
score: 100.0
IPR008972CupredoxinSUPERFAMILYSSF49503Cupredoxinscoord: 65..166
NoneNo IPR availablePANTHERPTHR34192FAMILY NOT NAMEDcoord: 1..166
NoneNo IPR availablePANTHERPTHR34192:SF2PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATEDcoord: 1..166
IPR028871Blue (type 1) copper protein, binding sitePROSITEPS00196COPPER_BLUEcoord: 145..159

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G041220Cla007419Watermelon (97103) v1cgybwmB235
CsGy3G041220Csa3G875430Cucumber (Chinese Long) v2cgybcuB110
CsGy3G041220MELO3C003725Melon (DHL92) v3.5.1cgybmeB185
CsGy3G041220ClCG05G015390Watermelon (Charleston Gray)cgybwcgB219
CsGy3G041220CSPI03G43700Wild cucumber (PI 183967)cgybcpiB111
CsGy3G041220CmaCh09G000820Cucurbita maxima (Rimu)cgybcmaB287
CsGy3G041220CmoCh09G000810Cucurbita moschata (Rifu)cgybcmoB260
CsGy3G041220Lsi04G017810Bottle gourd (USVL1VR-Ls)cgyblsiB176
CsGy3G041220Cp4.1LG06g00360Cucurbita pepo (Zucchini)cgybcpeB438
CsGy3G041220MELO3C003725.2Melon (DHL92) v3.6.1cgybmedB186
CsGy3G041220CsaV3_3G046150Cucumber (Chinese Long) v3cgybcucB117
CsGy3G041220Cla97C05G096440Watermelon (97103) v2cgybwmbB211
CsGy3G041220Bhi09G001893Wax gourdcgybwgoB329
CsGy3G041220Carg08654Silver-seed gourdcarcgybB0111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G041220Wild cucumber (PI 183967)cgybcpiB106
CsGy3G041220Cucumber (Gy14) v2cgybcgybB050
CsGy3G041220Cucurbita maxima (Rimu)cgybcmaB302
CsGy3G041220Cucurbita maxima (Rimu)cgybcmaB358
CsGy3G041220Cucurbita maxima (Rimu)cgybcmaB421
CsGy3G041220Cucurbita moschata (Rifu)cgybcmoB275
CsGy3G041220Cucurbita moschata (Rifu)cgybcmoB330
CsGy3G041220Cucurbita moschata (Rifu)cgybcmoB399
CsGy3G041220Cucurbita pepo (Zucchini)cgybcpeB298
CsGy3G041220Cucurbita pepo (Zucchini)cgybcpeB387
CsGy3G041220Cucurbita pepo (Zucchini)cgybcpeB443
CsGy3G041220Cucumber (Chinese Long) v2cgybcuB106
CsGy3G041220Watermelon (Charleston Gray)cgybwcgB187