CmaCh09G000820 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G000820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Blue (Type 1) copper protein
Location	Cma_Chr09 : 361527 .. 362030 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

mRNA sequence

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

Coding sequence (CDS)

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

Protein sequence

MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of CmaCh09G000820 vs. Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.3e-62
Identity = 127/170 (74.71%), Postives = 147/170 (86.47%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKST---AAVRVSSPSVPKLTVRASLKDLGVAVAATA 60
           MATVTSA VAIPSFTGLK  A++S      A+ +V++  V +LTV+ASLKD+G  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120
            SA+LASNA+A+EVLLGGDDGSLAFIP +FSV+AGEKI FKNNAGFPHNVVFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           VDA KISM+EEDLLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of CmaCh09G000820 vs. Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 5.6e-62
Identity = 125/168 (74.40%), Postives = 147/168 (87.50%), Query Frame = 1


Query: 1   MATV-TSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MATV +SA VA+PSFTGLK S +   +TA +  ++ +VP+L+V+ASLK++G AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
            LLA NA+A+EVLLGG DGSLAF+P DFSVA+GE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISM+EEDLLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of CmaCh09G000820 vs. Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA+VTSATVAIPSFTGLK S   S +T  ++ ++ + PKLTV++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NA+AIEVLLGG DGSLAFIPNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM+E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-61
Identity = 122/168 (72.62%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKT-SATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MATVTSA V+IPSFTGLK  SA+ +K +A+ +VS+  +P+L+++AS+KD+G AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNA+AI+VLLG DDGSLAF+P++FS++ GEKIVFKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISM+EEDLLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of CmaCh09G000820 vs. Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 3.4e-59
Identity = 118/168 (70.24%), Postives = 147/168 (87.50%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKT-SATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MA VTSA V+IPSFTGLK  SA+ +K +A+ +VS+  +P+L+++ASLK++G AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNA+A++VLLG DDGSLAF+P++FSV AGEKIVFKNNAGFPHNV+FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
             KISM+EEDLLNA GE +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of CmaCh09G000820 vs. TrEMBL
Match: A0A0A0LE99_CUCSA (Plastocyanin OS=Cucumis sativus GN=Csa_3G875430 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-67
Identity = 138/167 (82.63%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S ++SK T+ +R+ SP+ PKL ++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820 vs. TrEMBL
Match: A0A061FDN2_THECC (Plastocyanin OS=Theobroma cacao GN=TCM_034307 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK  AT +K++A  +V++ S P L+++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKAGATPAKASATTKVATSSGPMLSIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNALAIEV LGGDDG LAF+P+DFSV+AGEKIVFKNNAGFPHNV+FDEDEIPSGVDA
Sbjct: 61  ILASNALAIEVKLGGDDGELAFVPSDFSVSAGEKIVFKNNAGFPHNVIFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM++E+LLNAPGEVY V LTEKG+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 SKISMSDEELLNAPGEVYAVTLTEKGTYSFYCTPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. TrEMBL
Match: I1JSY7_SOYBN (Plastocyanin OS=Glycine max GN=GLYMA_04G020300 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-65
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A K +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820 vs. TrEMBL
Match: A0A0B2RGW1_GLYSO (Plastocyanin OS=Glycine soja GN=glysoja_013832 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-65
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A K +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820 vs. TrEMBL
Match: C6SZV4_SOYBN (Plastocyanin OS=Glycine max PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.1e-64
Identity = 134/167 (80.24%), Postives = 151/167 (90.42%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A   +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGIVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820 vs. TAIR10
Match: AT1G20340.1 (AT1G20340.1 Cupredoxin superfamily protein)

HSP 1 Score: 236.9 bits (603), Expect = 9.1e-63
Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA+VTSATVAIPSFTGLK S   S +T  ++ ++ + PKLTV++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NA+AIEVLLGG DGSLAFIPNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM+E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. TAIR10
Match: AT1G76100.1 (AT1G76100.1 plastocyanin 1)

HSP 1 Score: 218.4 bits (555), Expect = 3.4e-57
Identity = 120/174 (68.97%), Postives = 137/174 (78.74%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLK--------TSATASKSTAAVRVSSPSVPKLTVRASLKDLGVA 60
           MA +TSATV IPSFTGLK        T +T S+ST+A R      PKL +++SLKD GV 
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAP----PKLALKSSLKDFGVI 60

Query: 61  VAATAASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDED 120
             ATAAS +LA NA+A+EVLLG DDGSLAF+P++F+VA GEKIVFKNNAGFPHNVVFDED
Sbjct: 61  AVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDED 120

Query: 121 EIPSGVDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTV 167
           EIPSGVDA KISM+E  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 EIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: gi|659132911|ref|XP_008466451.1| (PREDICTED: plastocyanin [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 8.0e-69
Identity = 142/167 (85.03%), Postives = 159/167 (95.21%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK+S++ SK T+A+R+ SP+ PKL+VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSS-SKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GE IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: gi|449437172|ref|XP_004136366.1| (PREDICTED: plastocyanin [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 3.4e-67
Identity = 138/167 (82.63%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S ++SK T+ +R+ SP+ PKL ++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: gi|590594685|ref|XP_007017921.1| (Plastocyanin 1 [Theobroma cacao])

HSP 1 Score: 255.0 bits (650), Expect = 9.2e-65
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK  AT +K++A  +V++ S P L+++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKAGATPAKASATTKVATSSGPMLSIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNALAIEV LGGDDG LAF+P+DFSV+AGEKIVFKNNAGFPHNV+FDEDEIPSGVDA
Sbjct: 61  ILASNALAIEVKLGGDDGELAFVPSDFSVSAGEKIVFKNNAGFPHNVIFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM++E+LLNAPGEVY V LTEKG+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 SKISMSDEELLNAPGEVYAVTLTEKGTYSFYCTPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: gi|734406057|gb|KHN33826.1| (Plastocyanin, chloroplastic [Glycine soja])

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A K +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: gi|1012203378|ref|XP_015973807.1| (PREDICTED: plastocyanin [Arachis duranensis])

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-64
Identity = 137/170 (80.59%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 1   MATVT-SATVAIPSFTGLKTSAT--ASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATA 60
           MAT+T SA V IPSFTGLK +AT   +K +A V+VS+   P+L V+ASLKD+GVAV ATA
Sbjct: 1   MATITNSAAVTIPSFTGLKATATNATTKVSAGVKVSAAQFPRLGVKASLKDVGVAVVATA 60

Query: 61  ASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120
           ASA+LASNA+AIEVLLGGDDGSLAFIP DFS+AAGEKIVFKNNAGFPHNVVFDEDEIPSG
Sbjct: 61  ASAVLASNAMAIEVLLGGDDGSLAFIPKDFSIAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120

Query: 121 VDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           VDA KISM+EEDLLNAPGEVY V L+EKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAPGEVYNVTLSEKGTYSFYCSPHQGAGMVGKVTVN 170

The following BLAST results are available for this feature:

BLAST of CmaCh09G000820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLAS_SOLLC	3.3e-62	74.71	Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1	[more]
PLAS_SPIOL	5.6e-62	74.40	Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2	[more]
PLAS2_ARATH	1.6e-61	74.25	Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1...	[more]
PLAS1_POPNI	2.1e-61	72.62	Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	[more]
PLAS2_POPNI	3.4e-59	70.24	Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	[more]

BLAST of CmaCh09G000820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE99_CUCSA	2.3e-67	82.63	Plastocyanin OS=Cucumis sativus GN=Csa_3G875430 PE=3 SV=1	[more]
A0A061FDN2_THECC	6.4e-65	79.04	Plastocyanin OS=Theobroma cacao GN=TCM_034307 PE=3 SV=1	[more]
I1JSY7_SOYBN	8.3e-65	80.84	Plastocyanin OS=Glycine max GN=GLYMA_04G020300 PE=3 SV=1	[more]
A0A0B2RGW1_GLYSO	8.3e-65	80.84	Plastocyanin OS=Glycine soja GN=glysoja_013832 PE=3 SV=1	[more]
C6SZV4_SOYBN	7.1e-64	80.24	Plastocyanin OS=Glycine max PE=2 SV=1	[more]

BLAST of CmaCh09G000820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20340.1	9.1e-63	74.25	Cupredoxin superfamily protein	[more]
AT1G76100.1	3.4e-57	68.97	plastocyanin 1	[more]

BLAST of CmaCh09G000820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132911\|ref\|XP_008466451.1\|	8.0e-69	85.03	PREDICTED: plastocyanin [Cucumis melo]	[more]
gi\|449437172\|ref\|XP_004136366.1\|	3.4e-67	82.63	PREDICTED: plastocyanin [Cucumis sativus]	[more]
gi\|590594685\|ref\|XP_007017921.1\|	9.2e-65	79.04	Plastocyanin 1 [Theobroma cacao]	[more]
gi\|734406057\|gb\|KHN33826.1\|	1.2e-64	80.84	Plastocyanin, chloroplastic [Glycine soja]	[more]
gi\|1012203378\|ref\|XP_015973807.1\|	5.9e-64	80.59	PREDICTED: plastocyanin [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000923	BlueCu_1
IPR001235	Copper_blue_Plastocyanin
IPR002387	Plastocyanin
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0048767	root hair elongation
biological_process	GO:0009744	response to sucrose
biological_process	GO:0010114	response to red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0009932	cell tip growth
biological_process	GO:0009637	response to blue light
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0009657	plastid organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0071555	cell wall organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0055035	plastid thylakoid membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G000820.1	CmaCh09G000820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 70..167 score: 1.8
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 88..101 score: 3.2E-14coord: 144..158 score: 3.2E-14coord: 103..118 score: 3.2
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 97..115 score: 2.6E-34coord: 146..165 score: 2.6E-34coord: 74..93 score: 2.6
IPR002387	Plastocyanin	TIGRFAMs	TIGR02656	TIGR02656	coord: 69..167 score: 2.3
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 70..167 score: 3.7
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 67..167 score: 2.78
None	No IPR available	PANTHER	PTHR34192	FAMILY NOT NAMED	coord: 1..167 score: 3.1
None	No IPR available	PANTHER	PTHR34192:SF2	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..167 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G000820	Cucsa.343280	Cucumber (Gy14) v1	cgycmaB0920
CmaCh09G000820	Cla007419	Watermelon (97103) v1	cmawmB029
CmaCh09G000820	Csa3G875430	Cucumber (Chinese Long) v2	cmacuB017
CmaCh09G000820	MELO3C003725	Melon (DHL92) v3.5.1	cmameB032
CmaCh09G000820	ClCG05G015390	Watermelon (Charleston Gray)	cmawcgB024
CmaCh09G000820	CSPI03G43700	Wild cucumber (PI 183967)	cmacpiB017
CmaCh09G000820	CmoCh09G000810	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G000820	Lsi04G017810	Bottle gourd (USVL1VR-Ls)	cmalsiB024
CmaCh09G000820	Cp4.1LG06g00360	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G000820	MELO3C003725.2	Melon (DHL92) v3.6.1	cmamedB031
CmaCh09G000820	CsaV3_3G046150	Cucumber (Chinese Long) v3	cmacucB0024
CmaCh09G000820	Cla97C05G096440	Watermelon (97103) v2	cmawmbB029
CmaCh09G000820	CsGy3G041220	Cucumber (Gy14) v2	cgybcmaB287
CmaCh09G000820	Carg08654	Silver-seed gourd	carcmaB0134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G000820	Cucurbita maxima (Rimu)	cmacmaB051
CmaCh09G000820	Cucurbita maxima (Rimu)	cmacmaB067
CmaCh09G000820	Cucurbita moschata (Rifu)	cmacmoB047
CmaCh09G000820	Cucurbita moschata (Rifu)	cmacmoB064
CmaCh09G000820	Cucurbita pepo (Zucchini)	cmacpeB036
CmaCh09G000820	Cucurbita pepo (Zucchini)	cmacpeB045