Cucsa.328050 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.328050
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	18S pre-ribosomal assembly protein gar2
Location	scaffold03159 : 321668 .. 325452 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAACCTTACTGCACCGCCGTTAACAAATCGCTCAACTTCCTGTAGTTCCCGGCGACTTTCAATTATCCGGTGAAAGACCTTCACCAAATTTCCCTTTCCCACACAAATCCAGGCTGTACTGCAATTAGTATTTGATTTGTTAAACAACTCAACAATTCCTGAAGAAATCCAAGTGACTGATGAGAATTTGACAATTACAAAGCTTCTTTCAATTACGATACAAGTCACATAAAGGTCGGAGATCAATATTTGACGTTTTTTCGATTTGTTTCTGCTCCGGTGATCGGCGACCCGGCATAAGGCGGTGTTTCGAGGAGAGAATCCGGTGAAGAAGGAGGAGGAGCAGCAGATGTTTGTTTTGGTAAGTAATTTGAAGTTAGGTTTAGGGTAAGCGAAAGGTATATTAATTAGGGAGCGGAGTCTGGTAAGGCCATTTGTTTGTCTCTTCCTTTATTAATTGCAATGAAAGAGAGAGAGAGAGAGAAGGACGTTCTGTATAATCTGCCATGGCAGGTGACCTTTTTTTAGGCTGATAACAGAAATAGCCAAGCTCTCTCTGACTCTGTTCCACCATTTATTCAAATTTCACTCTCTTTTTCTCTCTGTTCCATAAATTCAATCACCAAACTAGGGCGCTCCTTTGCCCCATTTTTTCACTCTTCCTTTTAATACTATCAGGGGGTTTCTGCCTCAGCACATTTCTGCTTCAGGGTTTTACATGGAGGTTGATACTTTTTGTTTTTTCATAATTTCTTCTTTAACTCTGTGTATTATATTCTTGTTTGAATATTTGACTTCCCTGTCTGTTCATGTTTCTTTTTCTCATTCTCTGATGTTTTGAATTCTTTCTGTTAGTGTACTTTTTTTTtCCTCCATTAACAGCGAGGTGGAGGATGGGGGTTGATTTTGTTTCATCATTAGTTGAAGATAAAGGAGAATTGGTGGGGGAATTTTCTTTGTTTGAATAATCATTTTAAGTTATGATGTTTCTGTTGAAAGTTTTTGTTTGCTTTTGAAAAGTTCTTCCAACTTTTTTTACCACTCGTCTTTTTCTATTTTTATTATTATTTTTGAGTATTGGTAACAGGGCTTTGGATTCCCAGCACGTATAGCCCAGAGAACTTTTTTTtATTTTTATTTTGAACCAAGTTATCGTGTAACAATGACTTTGATCTGATTTTCTTGATTTACTCAAGCGTTCTGTGCTGAGATTATTGTTAATTTTCATTGAAATGTCACTGCCTTTTATGGTAAATTGCTAACATTAGTTAGCTGATTCTCTGTAGTTCTTAAATGAGTGATTCTGGAGGGTCCGGACCTTGGCACCTGCTCAATCACCTAGGAGCTGACAATGCTATTCATTGTATGTAACTGTTATAATAGTTGGGAAGGgAGGGGGGTCTTCTTTTGGCTTTTGGCTTTTGCCAGTTTGAACTCAAACTTTTCTCTTTATTATCATTAAAATAGATTTGCTTGTTCTGCTTCAGAATAATTGATATAATTACAATATCTGAGGGGAATATATAGGAATTGCTAATGGAGTAATGGGTCACAGTCACAGATTATGATCCATTTCTTGGAATGACTTTTTTCCTTCACTCTGTTATAACATCAAAGTGGCAATGAAGAAGTTGTGTTTGATTTCCAATCTTATAGTGGACTGCAAAGTTTTATATTTGTCTCTTCCTTTTAAGCTCAGTTTTTTTtCTTCTTCGTTCGTCCATTCATAGAAGTTTAGAAAGTTGTTGAATTTCTGTTTCAATAAATTCATGTTTTTTGGCAGGTTCATGCTATCTTTCATGAAGGTTTGAATCTCTTGAAGGTCCTTTTGCCTCCATGATTTGTTAGCTATGAAACTGGGTATTAACATTTTCCATTGCCTTGTATTCTACTTGATCTTTATCATTTTGGTGCTACTTACACTCATCAATCCACCGCTTTTTCAATTTGTTGTCCTAACTTGGATTTGTGATTATGTATATGCAGACAGTGACTCTTCATTTTACCATTCAATGACCAGCCCGAACGATGCTCCAGAATCTCTCGAATGCAATTACAGCAGTACTGTGTTGCAACACCGGGTCATGACTAATAATCCAACTGGCCTCTCATTTCAACAGAAGATAAACCAGGAAAATGTTGTTCAATCTTCACATTCTTCTTGTGATGGGAATAGTTGCATGATTACTAAGATTAACCGGTCGTCTACAGATGTTTTTGATGATAATAATGCTGAAGGTATTAGTGCATTTGGGGCATCATCCAATATGAAACCCTCATTCTCATATGTTGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTCTGTGACCAAGAAGTTAATGTCAATGATGTGAAGGATATTTGCATCGATGATGGGGTGGCTTCTCTGGAAAATTTCTTCTTTAAGAGTACGGCCGAGAAGTCAATCAGTAAAATCTCCCCTCTGGAGGAAGACCGGAACGAAGGATCTATAAAAGAAAAAGAGACTTCTTCTGAGGTGTCCAAGTTCATAGCAGATGATCGTAAAGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGACTTGACACAGATAGAGGAAGAAAAACTCAATCTGAGCGAGCCAGAGCTTTTGATGCAAAAGCTTGTTAAAAGAAGTTACTCTTCCGAGTCTTTAGATAAAATAGGTCTGCAGGTATGCATATTTCTGGCCAAATTATTAATCATGTTCTGTCGTACACTACATGTTTGTTCTATTTTTAATCTGAATATATTGAAGGATGCTCGTTTTGACAAAACAATTTTAGCTCCAGTGGTCATGTTTGATGTGGATTGCATTTCTTTTAACTTCAGATATCTGGTGAAAAAaCAAATTTGGAAGACCCTTCTTCAGCTTCCAAATCTGTTGATTCTTGCAACGACACTCCTGCTTTGGACTCTGCAGCAGAACCACCCAAGGATAACATCCCAGCGCATCCTTCAGGTTATAATGATGAATTTGAGAATGGAAGTATTGCACTTACTTTCAATTCGATATCTCCAGTGGCAAATGGTGGAGAAGAACGTCAGGAGTGTTGTGGAAGAAGTGATTCTGTAATTGGAACTCAAGTTTTAACCAATCTGGAATATAGAACTTCAGATAGTAGACTACTTTCAAGTCAAAACATGCACGACATTGGCGAGTCTAGTTTCTCTGCCGTAGATCCACTAGCTAGTCTTGTTACTTACTCAGGGCCAGTAGCTTATTCTGGAAGCATCTCGCTTCGATCAGAAAGTAGCACAACTAGCACACGTTCTTTTGCCTTCCCTATGTAAGTCGCAATCTAACTTCACCTCTCAAGCTTCATCTTTATATATCCCTTTCTTAATTGTAATCTAAGGTAAATTGTATTTACTCTCTGGGTTTACAGATTACAGTCCGAATGGAATAGTAGCCCGGTTAAAATGGTAAAAGCTGAACGAAGGCATTACCGAAAGTATCGAGGTTGGAGGGAGGGACTTCTATGCTGCAAATTCTAACTGGTTCTGTGCTATTTCTAGAGTTAGACTCTGTTTGTGCATCATCCAAATTTATTTTCACACACATGTAAGTAGATGTATTATTTCCTGGAGGTTATGCATTTCATTCATAGTCATTCTTTACAGTTTGGCCTATTATGTGAAATTTAATGTATTTGTAATACTTCATATCTCTCTTTTCTCTGGAAAATTTCTCCAGTGGACCATATTTCTCCATTATACAAGGATGGCAAAGCATGAAATGGTTGCTCTGTT

mRNA sequence

TGAACCTTACTGCACCGCCGTTAACAAATCGCTCAACTTCCTGTAGTTCCCGGCGACTTTCAATTATCCGGTGAAAGACCTTCACCAAATTTCCCTTTCCCACACAAATCCAGGCTGTACTGCAATTAGTATTTGATTTGTTAAACAACTCAACAATTCCTGAAGAAATCCAAGTGACTGATGAGAATTTGACAATTACAAAGCTTCTTTCAATTACGATACAAGTCACATAAAGGTCGGAGATCAATATTTGACGTTTTTTCGATTTGTTTCTGCTCCGGTGATCGGCGACCCGGCATAAGGCGGTGTTTCGAGGAGAGAATCCGGTGAAGAAGGAGGAGGAGCAGCAGATGTTTGTTTTGGTTCATGCTATCTTTCATGAAGGTTTGAATCTCTTGAAGGTCCTTTTGCCTCCATGATTTGTTAGCTATGAAACTGGACAGTGACTCTTCATTTTACCATTCAATGACCAGCCCGAACGATGCTCCAGAATCTCTCGAATGCAATTACAGCAGTACTGTGTTGCAACACCGGGTCATGACTAATAATCCAACTGGCCTCTCATTTCAACAGAAGATAAACCAGGAAAATGTTGTTCAATCTTCACATTCTTCTTGTGATGGGAATAGTTGCATGATTACTAAGATTAACCGGTCGTCTACAGATGTTTTTGATGATAATAATGCTGAAGGTATTAGTGCATTTGGGGCATCATCCAATATGAAACCCTCATTCTCATATGTTGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTCTGTGACCAAGAAGTTAATGTCAATGATGTGAAGGATATTTGCATCGATGATGGGGTGGCTTCTCTGGAAAATTTCTTCTTTAAGAGTACGGCCGAGAAGTCAATCAGTAAAATCTCCCCTCTGGAGGAAGACCGGAACGAAGGATCTATAAAAGAAAAAGAGACTTCTTCTGAGGTGTCCAAGTTCATAGCAGATGATCGTAAAGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGACTTGACACAGATAGAGGAAGAAAAACTCAATCTGAGCGAGCCAGAGCTTTTGATGCAAAAGCTTGTTAAAAGAAGTTACTCTTCCGAGTCTTTAGATAAAATAGGTCTGCAGATATCTGGTGAAAAAACAAATTTGGAAGACCCTTCTTCAGCTTCCAAATCTGTTGATTCTTGCAACGACACTCCTGCTTTGGACTCTGCAGCAGAACCACCCAAGGATAACATCCCAGCGCATCCTTCAGGTTATAATGATGAATTTGAGAATGGAAGTATTGCACTTACTTTCAATTCGATATCTCCAGTGGCAAATGGTGGAGAAGAACGTCAGGAGTGTTGTGGAAGAAGTGATTCTGTAATTGGAACTCAAGTTTTAACCAATCTGGAATATAGAACTTCAGATAGTAGACTACTTTCAAGTCAAAACATGCACGACATTGGCGAGTCTAGTTTCTCTGCCGTAGATCCACTAGCTAGTCTTGTTACTTACTCAGGGCCAGTAGCTTATTCTGGAAGCATCTCGCTTCGATCAGAAAGTAGCACAACTAGCACACGTTCTTTTGCCTTCCCTATATTACAGTCCGAATGGAATAGTAGCCCGGTTAAAATGGTAAAAGCTGAACGAAGGCATTACCGAAAGTATCGAGGTTGGAGGGAGGGACTTCTATGCTGCAAATTCTAACTGGTTCTGTGCTATTTCTAGAGTTAGACTCTGTTTGTGCATCATCCAAATTTATTTTCACACACATGTAAGTAGATGTATTATTTCCTGGAGGTTATGCATTTCATTCATAGTCATTCTTTACAGTTTGGCCTATTATGTGAAATTTAATGTATTTGTAATACTTCATATCTCTCTTTTCTCTGGAAAATTTCTCCAGTGGACCATATTTCTCCATTATACAAGGATGGCAAAGCATGAAATGGTTGCTCTGTT

Coding sequence (CDS)

ATGAAACTGGACAGTGACTCTTCATTTTACCATTCAATGACCAGCCCGAACGATGCTCCAGAATCTCTCGAATGCAATTACAGCAGTACTGTGTTGCAACACCGGGTCATGACTAATAATCCAACTGGCCTCTCATTTCAACAGAAGATAAACCAGGAAAATGTTGTTCAATCTTCACATTCTTCTTGTGATGGGAATAGTTGCATGATTACTAAGATTAACCGGTCGTCTACAGATGTTTTTGATGATAATAATGCTGAAGGTATTAGTGCATTTGGGGCATCATCCAATATGAAACCCTCATTCTCATATGTTGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTCTGTGACCAAGAAGTTAATGTCAATGATGTGAAGGATATTTGCATCGATGATGGGGTGGCTTCTCTGGAAAATTTCTTCTTTAAGAGTACGGCCGAGAAGTCAATCAGTAAAATCTCCCCTCTGGAGGAAGACCGGAACGAAGGATCTATAAAAGAAAAAGAGACTTCTTCTGAGGTGTCCAAGTTCATAGCAGATGATCGTAAAGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGACTTGACACAGATAGAGGAAGAAAAACTCAATCTGAGCGAGCCAGAGCTTTTGATGCAAAAGCTTGTTAAAAGAAGTTACTCTTCCGAGTCTTTAGATAAAATAGGTCTGCAGATATCTGGTGAAAAAaCAAATTTGGAAGACCCTTCTTCAGCTTCCAAATCTGTTGATTCTTGCAACGACACTCCTGCTTTGGACTCTGCAGCAGAACCACCCAAGGATAACATCCCAGCGCATCCTTCAGGTTATAATGATGAATTTGAGAATGGAAGTATTGCACTTACTTTCAATTCGATATCTCCAGTGGCAAATGGTGGAGAAGAACGTCAGGAGTGTTGTGGAAGAAGTGATTCTGTAATTGGAACTCAAGTTTTAACCAATCTGGAATATAGAACTTCAGATAGTAGACTACTTTCAAGTCAAAACATGCACGACATTGGCGAGTCTAGTTTCTCTGCCGTAGATCCACTAGCTAGTCTTGTTACTTACTCAGGGCCAGTAGCTTATTCTGGAAGCATCTCGCTTCGATCAGAAAGTAGCACAACTAGCACACGTTCTTTTGCCTTCCCTATATTACAGTCCGAATGGAATAGTAGCCCGGTTAAAATGGTAAAAGCTGAACGAAGGCATTACCGAAAGTATCGAGGTTGGAGGGAGGGACTTCTATGCTGCAAATTCTAA

Protein sequence

MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF*

Homology

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BLAST of Cucsa.328050 vs. TrEMBL
Match: A0A0A0KFP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 1.3e-239
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 1


Query: 13  MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 72
           MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 132
           INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 192
           CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 252
           HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 253 DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE 312
           DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE 300

Query: 313 ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV 372
           ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV
Sbjct: 301 ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV 360

Query: 373 AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF
Sbjct: 361 AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 419

[Close]

BLAST of Cucsa.328050 vs. TrEMBL
Match: A0A0A0KQY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606850 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 8.2e-48
Identity = 153/470 (32.55%), Postives = 231/470 (49.15%), Query Frame = 1


Query: 1   MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKI----NQENVV 60
           MK++ +    HS  SP   P+S EC+  +          N  G+  + +     N +  V
Sbjct: 1   MKVEGEPIVCHSNASPKFVPKSFECDNDAL---------NSGGMKLEDQKEFTNNLKGNV 60

Query: 61  QSSHSSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNM--------KPSFSYVDKS 120
            + H++ D +  +  K  R   D+ D N+ + + AF +  N         + S  Y++KS
Sbjct: 61  DADHNNTDADGWVAKK--RECLDLDDFNDYDDVKAFVSPLNNSCKADLSEEDSELYMEKS 120

Query: 121 VMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGS 180
           V+ECQ+ + IVC +E   N VKDICIDDG    + F   S  EK +  I P  +D  + S
Sbjct: 121 VVECQLPELIVCYKENICNIVKDICIDDGTPRDKLFCGSSLDEKDVCSILPPTKDWKDES 180

Query: 181 IKEKETSSEVSKFIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLS---EPELLMQ 240
           + E +   +   F +DD + S E   + D     D+KDL    E + +++   + ++ M 
Sbjct: 181 VGELK---QRDMFASDDSEHS-ESFGSKDSPNEYDSKDLAITPEAEYDVAYFTDNDMPMT 240

Query: 241 KLVKRSYSSESLDKIGLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNI---- 300
            LV  S    + ++I      E+  +E          +C++ P L   AE    N     
Sbjct: 241 DLVTESLKPLTNNEIKPHPQSEQVFIET---------TCSEVPVLVRVAEESFSNTREAT 300

Query: 301 ---------PAHPSGYNDEFENGSIALT-FNSISPVANGGEERQECCGRSDSV--IGTQV 360
                    P H    N    + S+      S +P+A+  +   EC   S +   +  + 
Sbjct: 301 SESITSAEDPKHGDSANAPSTSASVGCKETTSSNPLASADKCEAECHTTSSNPKHVEYED 360

Query: 361 LTNLEYR--------TSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLR 420
           L  +EY           DS  +SS+    +GE+SFS V PL SL++ SG + YSGSIS R
Sbjct: 361 LRRVEYEDIPKTEVGNFDSHTVSSEVSQGVGETSFS-VAPLGSLISNSGRIGYSGSISHR 420

Query: 421 SESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           S+SSTTSTRSFAFPILQSEW SSPV+MVK +R+H +K+RGWR G+LCC+F
Sbjct: 421 SDSSTTSTRSFAFPILQSEWTSSPVRMVKPDRKHLQKHRGWRHGILCCRF 445

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BLAST of Cucsa.328050 vs. TrEMBL
Match: B9RLG9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466920 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.3e-47
Identity = 164/501 (32.73%), Postives = 240/501 (47.90%), Query Frame = 1


Query: 1   MKLDSDSSFYHSMTSPNDAPESLECNY----SSTVLQHRVMTNNPTGLSFQQKINQENVV 60
           MKLDS+    H         +S   N     SS +    V+ N      F     +E   
Sbjct: 1   MKLDSEQVLCHGTGDHKSISKSFGYNKIALDSSGLRSGNVIVNEDENGPFYDLKAREGNT 60

Query: 61  QSSHSSCDG----NSCMITKINRSSTDVFD-DNNAEGISAFGASSNMKPSFSYVDKSVME 120
              H   +G    N+  +      +  + D +      ++    S  K S  Y+DK+VME
Sbjct: 61  DQLHYLVNGEDGWNASKLDSCTGVNVSIHDKEEEVRNFTSLKIESFDKDSVFYIDKNVME 120

Query: 121 CQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKE 180
            ++ + ++C +E   + VKDIC+D+GV S ENF F ++ ++   K+ P         I E
Sbjct: 121 PELPELVLCYKENTYHVVKDICVDEGVPSQENFLFDTSVDQ--EKLCPY-------LIPE 180

Query: 181 KETSSEVSKFIADDRKVSLEDHFAMDWTTHNDAKD---LTQIE----EEKLNLSEPE--- 240
           K+  SE+ K    D  +S +     D +   D+K+   + +IE    EE  N +  E   
Sbjct: 181 KDIKSEIQKERV-DLDMSTQYLSKNDNSFKCDSKESMAIAEIEDDAMEEIANYTSKETFS 240

Query: 241 ----LLMQKLVKRSYSSESL-------DKIGLQISGEKTNLEDPSSASKSVDSCND---- 300
               LLM ++V     S+SL       +++ +Q   E   L   S+  +S  +       
Sbjct: 241 LGELLLMPEVVAELSHSKSLLNSTDEAEQLSIQRPSENIVLATASACEESKYATEQFLLV 300

Query: 301 TPALDSAAEP-----------PKDNIP-AHPSGYN-------------DEFENGSIAL-- 360
           TPA+D   E              D+ P A   G++             +E ENG+ A   
Sbjct: 301 TPAVDPLVEESGHEEAKLGTLTSDSSPKASDHGHDEVILASLAPSYATEEPENGAKAAKS 360

Query: 361 ---------TFNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHD 420
                      NS +P A+GGEE  +  G S+ +      ++    TS +   S Q  + 
Sbjct: 361 PSHTLDSVSDLNSSAPTASGGEEGSQ-VGGSEHLESRN--SSRHEDTSITEPFSGQLQYS 420

Query: 421 IGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVK 432
            GESSFSA  PL+ L++YSGP+AYSGS+SLRS+SSTTSTRSFAFPILQSEWNSSPV+M K
Sbjct: 421 HGESSFSAAGPLSGLISYSGPIAYSGSLSLRSDSSTTSTRSFAFPILQSEWNSSPVRMAK 480

[Close]

BLAST of Cucsa.328050 vs. TrEMBL
Match: D7TA77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00560 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.5e-45
Identity = 153/453 (33.77%), Postives = 226/453 (49.89%), Query Frame = 1


Query: 1   MKLDSDSSFYHSMTSPNDAPESLECN-YSSTVLQ----HRVMTNNPTGLSFQQKINQENV 60
           MKLDS+  F HS        +  E N YS         + ++  N   +S   K ++ + 
Sbjct: 1   MKLDSEPVFCHSTLVHKSDSKPFEYNDYSLDTAVPKSGNEIVKENQKVISCDLKGHERDA 60

Query: 61  VQSSHSSCDGNSCMITKINRS-STDVFDDNNAEG------ISAFGASSNMKPSFSY---- 120
                   DG         R  S +V D  NA G      ++    SS    SF      
Sbjct: 61  -----DPLDGEDRFWNTSERDCSINVDDIANACGNEVRNSVATCVVSSEKLESFEKDGDM 120

Query: 121 -VDKSVMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEED 180
             DKSV + ++    VC +E   + VKDICID+G+ S E    ++  E+       L  D
Sbjct: 121 CTDKSVTKHELP---VCCEESTYHAVKDICIDEGMLSPEKILVENGKEEHEGFCPFLPPD 180

Query: 181 RNEGSIKEKETSSEVSKFIADDRKVSLEDHFAMDWTTHN---DAKD--LTQIEEEKLNLS 240
            ++     KET+ +    + D +K S E+    D        DA+D  ++   EEK+ + 
Sbjct: 181 TDKNVDPTKETADKELP-LPDGQKASAENDCGKDLMQEEENYDARDKIISDTSEEKI-VP 240

Query: 241 EPELLMQKLVKRSYSSESLDKIGLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPK 300
           E   L+ +L K +   ES +  G++I  E   +++P+      ++  + PAL S AE   
Sbjct: 241 EDIFLIPELSKANSMPESSEFNGMEI--EHQCIQNPNG-----EAVLENPALVSEAEESD 300

Query: 301 DNIPAHPSGYNDEFENGSIALTFNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTS 360
            N   +   YN + E+G+I   F S +   + G E        +  + +Q L+ LE   S
Sbjct: 301 KNSFPNELSYNSKLESGTITFDFGSSTTSMDSGREVSPQNDGCEPPLESQNLSKLE-DGS 360

Query: 361 DSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQ 420
           +S   S Q    +GESSFSA  P ++L++YSG + +SG+ISLRS+SSTTSTRSFAFP+LQ
Sbjct: 361 ESLPFSGQIQRGLGESSFSAAGPSSALISYSGQITHSGNISLRSDSSTTSTRSFAFPVLQ 420

Query: 421 SEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           +EWNSSPV+M KAERRH RK+R WR G+LCC+F
Sbjct: 421 TEWNSSPVRMAKAERRHLRKHRSWRRGILCCRF 435

[Close]

BLAST of Cucsa.328050 vs. TrEMBL
Match: A0A151TRT8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_008982 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.3e-41
Identity = 128/345 (37.10%), Postives = 187/345 (54.20%), Query Frame = 1


Query: 104 YVDKSVMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAE-KSISKISPLEE 163
           Y+DK+V EC+  +  VC +E N + VKDIC+D+G  + +   F +T + K+ +  S   E
Sbjct: 70  YMDKTVTECE-PQLEVCYKESNYHVVKDICVDEGALTKDKVMFVNTVDDKAYNFPSESYE 129

Query: 164 DRNEGSIKEKETSSEVSKF--IADDRKVSLEDHFAMDWTTHNDAKDLTQIE---EEKLNL 223
            + +    E  TS  V       +  KVS     AMD   H D +   +I     E++ L
Sbjct: 130 SKEK---HEDNTSINVLNLPPTEESDKVSTNCDQAMD-LIHKDDEATGKISANVNEEMVL 189

Query: 224 SEPELLMQKL-VKRSYSSESLDKIGLQISGE----------KTNLEDPSSASKSVDSCND 283
            E ++L+Q L  + + SS+  D+   QIS E          K ++E+P+ AS S+   +D
Sbjct: 190 PEDKVLLQDLFAEDTVSSDHKDE---QISDEPEPHSQPEESKNSVEEPTLASPSLALTDD 249

Query: 284 TPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGEERQECCGRSDSVIG 343
                   E   D++P     ++ +          N  +P   G EE Q    + D ++ 
Sbjct: 250 --------ESNTDSVPLEIESFHHQL---------NPSAPAECGKEECQVGSCKCDEIL- 309

Query: 344 TQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESST 403
            Q L       SD + ++S   H+ GESSFSA+ P++  ++YSGPV YSGSISLRS+SST
Sbjct: 310 -QTLNKPVEGKSDDQAVTSHIHHNFGESSFSAIGPVSGRISYSGPVPYSGSISLRSDSST 369

Query: 404 TSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           TSTRSFAFPILQ+EWNSSPV+M KA+RR +RK   W++  LCCKF
Sbjct: 370 TSTRSFAFPILQNEWNSSPVRMAKADRRRFRKQWCWKDSFLCCKF 387

[Close]

BLAST of Cucsa.328050 vs. TAIR10
Match: AT2G03810.1 (AT2G03810.1 18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-25
Identity = 95/341 (27.86%), Postives = 164/341 (48.09%), Query Frame = 1


Query: 98  MKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKI 157
           ++  F + +K  ++   ++ ++   + NVN  +    +D ++ +++  F +  +      
Sbjct: 126 VQEKFLFGEKDSVKSSSTEDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTD---- 185

Query: 158 SPLEEDRNEGSIKEKETSSEVSK--FIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKL 217
             +EE   E     + TSS  ++   I  +   +   H         D     ++   + 
Sbjct: 186 RDVEESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQD 245

Query: 218 NLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAE 277
           N S+  L +  ++ R    +SL++    IS +    + PS          +T A+++  E
Sbjct: 246 NDSKECLTLGDILSREDEQKSLNQDN--ISSDSHEEQSPSQLQDKEKRSLETTAIETELE 305

Query: 278 PPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGEERQECCG---RSDSVIGTQVLTN 337
                         +E + G   L+  S+S   +  +E  + C    + ++    Q    
Sbjct: 306 K------------TEEPKQGEEKLS--SVSTTTS--QEPNKTCNEPEKPETENHHQQNCL 365

Query: 338 LEYRTSDSRLLSSQNMHDIGESSFSAVDP--LASLVTYSGPVAYSGSISLRSESSTTSTR 397
           +E    D +  SS+     GE+SFSA D   ++  +TYSGP+AYSGS+S+RS++STTS R
Sbjct: 366 VENSYEDDKFSSSR----FGETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGR 425

Query: 398 SFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           SFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCC+F
Sbjct: 426 SFAFPILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

HSP 2 Score: 56.6 bits (135), Expect = 4.4e-08
Identity = 39/139 (28.06%), Postives = 60/139 (43.17%), Query Frame = 1


Query: 95  SSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSI 154
           S   K    Y+DK+V  C + + +VC +E   + VKDIC+D+GV   E F F    EK  
Sbjct: 81  SPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLF---GEKDS 140

Query: 155 SKISPLEE--DRNEGSIKEKETSSEVSKFIADDRKVSLEDHFAMDWTTHNDAKDLTQIEE 214
            K S  E+    ++ ++   ET S        D      DH        +  +D    E 
Sbjct: 141 VKSSSTEDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEG 200

Query: 215 EKLNLSEPELLMQKLVKRS 232
              N ++  L++ + VK S
Sbjct: 201 TSSNYNQEHLIVTEEVKAS 216

[Close]

BLAST of Cucsa.328050 vs. TAIR10
Match: AT1G13650.2 (AT1G13650.2 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4))

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-11
Identity = 62/218 (28.44%), Postives = 90/218 (41.28%), Query Frame = 1


Query: 210 IEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTN----------LEDPSSASK 269
           I EEKL  ++     +  +  +   E LD+  L ++ ++ N          +   +S SK
Sbjct: 5   ISEEKLFFNKKPFGSK--ISDNNEIEELDQENLVVTRQEVNDDSKVAPRDVVATSTSVSK 64

Query: 270 SVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGEERQECCG 329
              +  D  +L+ +  PP  N    P   N    N  + +T  S         E    C 
Sbjct: 65  KALTLGDILSLEDSQSPPNKNNTNGPEE-NMVHHNPHLEITEES---------EADNSC- 124

Query: 330 RSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSIS 389
                              D+ LL     +  GE SF         +TY GP++ S ++S
Sbjct: 125 ------------------DDNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLS 184

Query: 390 LRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYR 418
           +RS+   TS  SFA PILQSEWNSSPV+M KAE    R
Sbjct: 185 IRSDG--TSASSFALPILQSEWNSSPVRMGKAEETQLR 189

[Close]

BLAST of Cucsa.328050 vs. NCBI nr
Match: gi|449452821|ref|XP_004144157.1| (PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus])

HSP 1 Score: 860.9 bits (2223), Expect = 9.4e-247
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 1


Query: 1   MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSH 60
           MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSH
Sbjct: 1   MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSH 60

Query: 61  SSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC 120
           SSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC
Sbjct: 61  SSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC 120

Query: 121 DQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSK 180
           DQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSK
Sbjct: 121 DQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSK 180

Query: 181 FIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKI 240
           FIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKI
Sbjct: 181 FIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKI 240

Query: 241 GLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALT 300
           GLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALT
Sbjct: 241 GLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALT 300

Query: 301 FNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVD 360
           FNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVD
Sbjct: 301 FNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVD 360

Query: 361 PLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYR 420
           PLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYR
Sbjct: 361 PLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYR 420

Query: 421 GWREGLLCCKF 432
           GWREGLLCCKF
Sbjct: 421 GWREGLLCCKF 431

[Close]

BLAST of Cucsa.328050 vs. NCBI nr
Match: gi|700192470|gb|KGN47674.1| (hypothetical protein Csa_6G370190 [Cucumis sativus])

HSP 1 Score: 836.6 bits (2160), Expect = 1.9e-239
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 1


Query: 13  MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 72
           MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 132
           INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 192
           CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 252
           HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 253 DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE 312
           DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE 300

Query: 313 ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV 372
           ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV
Sbjct: 301 ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV 360

Query: 373 AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF
Sbjct: 361 AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 419

[Close]

BLAST of Cucsa.328050 vs. NCBI nr
Match: gi|659089264|ref|XP_008445414.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo])

HSP 1 Score: 798.1 bits (2060), Expect = 7.5e-228
Identity = 402/431 (93.27%), Postives = 414/431 (96.06%), Query Frame = 1


Query: 1   MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSH 60
           MKL+SDSSFY+SMTS NDAPESLECNYSSTVLQHRVM+NNPT LS Q+KINQENV+QSSH
Sbjct: 1   MKLESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSH 60

Query: 61  SSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC 120
           SSCDGN CMITKINRSSTDVFD NNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC
Sbjct: 61  SSCDGNICMITKINRSSTDVFD-NNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC 120

Query: 121 DQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSK 180
           DQE+NVNDVKDICID+GVASLENFFFKST EKSISKISPLEEDRNEGSIKEKETS EVSK
Sbjct: 121 DQEINVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSK 180

Query: 181 FIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKI 240
           FIADD KVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPE+LMQKLVK+S SSESLDKI
Sbjct: 181 FIADDHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKI 240

Query: 241 GLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALT 300
           G+QISGEK NLEDPSSASKSVDSCNDTPAL SAAEPP  NI AHPSGYNDEFENGSIALT
Sbjct: 241 GVQISGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAAHPSGYNDEFENGSIALT 300

Query: 301 FNSISPVANGGEERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVD 360
            NSISPVANGGEE QECCGRSDSVIGTQV TNLEYRTSDSRLLSSQNM+DIGESSFSAVD
Sbjct: 301 LNSISPVANGGEEHQECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDIGESSFSAVD 360

Query: 361 PLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYR 420
           PLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQ+EWNSSPVKMVKAERRHYRKYR
Sbjct: 361 PLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSPVKMVKAERRHYRKYR 420

Query: 421 GWREGLLCCKF 432
           GWREGLLCCKF
Sbjct: 421 GWREGLLCCKF 430

[Close]

BLAST of Cucsa.328050 vs. NCBI nr
Match: gi|659089276|ref|XP_008445421.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo])

HSP 1 Score: 778.1 bits (2008), Expect = 8.0e-222
Identity = 392/419 (93.56%), Postives = 402/419 (95.94%), Query Frame = 1


Query: 13  MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 72
           MTS NDAPESLECNYSSTVLQHRVM+NNPT LS Q+KINQENV+QSSHSSCDGN CMITK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 73  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 132
           INRSSTDVFD NNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQE+NVNDVKDI
Sbjct: 61  INRSSTDVFD-NNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDI 120

Query: 133 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 192
           CID+GVASLENFFFKST EKSISKISPLEEDRNEGSIKEKETS EVSKFIADD KVSLED
Sbjct: 121 CIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIADDHKVSLED 180

Query: 193 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 252
           HFAMDWTTHNDAKDLTQIEEEKLNLSEPE+LMQKLVK+S SSESLDKIG+QISGEK NLE
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQISGEKANLE 240

Query: 253 DPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVANGGE 312
           DPSSASKSVDSCNDTPAL SAAEPP  NI AHPSGYNDEFENGSIALT NSISPVANGGE
Sbjct: 241 DPSSASKSVDSCNDTPALGSAAEPPSHNIAAHPSGYNDEFENGSIALTLNSISPVANGGE 300

Query: 313 ERQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPV 372
           E QECCGRSDSVIGTQV TNLEYRTSDSRLLSSQNM+DIGESSFSAVDPLASLVTYSGPV
Sbjct: 301 EHQECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDIGESSFSAVDPLASLVTYSGPV 360

Query: 373 AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           AYSGSISLRSESSTTSTRSFAFPILQ+EWNSSPVKMVKAERRHYRKYRGWREGLLCCKF
Sbjct: 361 AYSGSISLRSESSTTSTRSFAFPILQTEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 418

[Close]

BLAST of Cucsa.328050 vs. NCBI nr
Match: gi|778705669|ref|XP_011655722.1| (PREDICTED: uncharacterized protein LOC101218906 isoform X3 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 153/470 (32.55%), Postives = 231/470 (49.15%), Query Frame = 1


Query: 1   MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKI----NQENVV 60
           MK++ +    HS  SP   P+S EC+  +          N  G+  + +     N +  V
Sbjct: 1   MKVEGEPIVCHSNASPKFVPKSFECDNDAL---------NSGGMKLEDQKEFTNNLKGNV 60

Query: 61  QSSHSSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNM--------KPSFSYVDKS 120
            + H++ D +  +  K  R   D+ D N+ + + AF +  N         + S  Y++KS
Sbjct: 61  DADHNNTDADGWVAKK--RECLDLDDFNDYDDVKAFVSPLNNSCKADLSEEDSELYMEKS 120

Query: 121 VMECQMSKTIVCDQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGS 180
           V+ECQ+ + IVC +E   N VKDICIDDG    + F   S  EK +  I P  +D  + S
Sbjct: 121 VVECQLPELIVCYKENICNIVKDICIDDGTPRDKLFCGSSLDEKDVCSILPPTKDWKDES 180

Query: 181 IKEKETSSEVSKFIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLS---EPELLMQ 240
           + E +   +   F +DD + S E   + D     D+KDL    E + +++   + ++ M 
Sbjct: 181 VGELK---QRDMFASDDSEHS-ESFGSKDSPNEYDSKDLAITPEAEYDVAYFTDNDMPMT 240

Query: 241 KLVKRSYSSESLDKIGLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNI---- 300
            LV  S    + ++I      E+  +E          +C++ P L   AE    N     
Sbjct: 241 DLVTESLKPLTNNEIKPHPQSEQVFIET---------TCSEVPVLVRVAEESFSNTREAT 300

Query: 301 ---------PAHPSGYNDEFENGSIALT-FNSISPVANGGEERQECCGRSDSV--IGTQV 360
                    P H    N    + S+      S +P+A+  +   EC   S +   +  + 
Sbjct: 301 SESITSAEDPKHGDSANAPSTSASVGCKETTSSNPLASADKCEAECHTTSSNPKHVEYED 360

Query: 361 LTNLEYR--------TSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLR 420
           L  +EY           DS  +SS+    +GE+SFS V PL SL++ SG + YSGSIS R
Sbjct: 361 LRRVEYEDIPKTEVGNFDSHTVSSEVSQGVGETSFS-VAPLGSLISNSGRIGYSGSISHR 420

Query: 421 SESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 432
           S+SSTTSTRSFAFPILQSEW SSPV+MVK +R+H +K+RGWR G+LCC+F
Sbjct: 421 SDSSTTSTRSFAFPILQSEWTSSPVRMVKPDRKHLQKHRGWRHGILCCRF 445

The following BLAST results are available for this feature:

BLAST of Cucsa.328050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFP8_CUCSA	1.3e-239	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1	[more]
A0A0A0KQY1_CUCSA	8.2e-48	32.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606850 PE=4 SV=1	[more]
B9RLG9_RICCO	5.3e-47	32.73	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466920 PE=4 SV=1	[more]
D7TA77_VITVI	8.5e-45	33.77	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00560 PE=4 SV=...	[more]
A0A151TRT8_CAJCA	3.3e-41	37.10	Uncharacterized protein OS=Cajanus cajan GN=KK1_008982 PE=4 SV=1	[more]

BLAST of Cucsa.328050 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03810.1	2.3e-25	27.86	18S pre-ribosomal assembly protein gar2-related	[more]
AT1G13650.2	1.9e-11	28.44	BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assemb...	[more]

BLAST of Cucsa.328050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452821\|ref\|XP_004144157.1\|	9.4e-247	100.00	PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus]	[more]
gi\|700192470\|gb\|KGN47674.1\|	1.9e-239	100.00	hypothetical protein Csa_6G370190 [Cucumis sativus]	[more]
gi\|659089264\|ref\|XP_008445414.1\|	7.5e-228	93.27	PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo]	[more]
gi\|659089276\|ref\|XP_008445421.1\|	8.0e-222	93.56	PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo]	[more]
gi\|778705669\|ref\|XP_011655722.1\|	1.2e-47	32.55	PREDICTED: uncharacterized protein LOC101218906 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.328050.2	Cucsa.328050.2	mRNA
Cucsa.328050.3	Cucsa.328050.3	mRNA
Cucsa.328050.4	Cucsa.328050.4	mRNA
Cucsa.328050.1	Cucsa.328050.1	mRNA
Cucsa.328050.5	Cucsa.328050.5	mRNA
Cucsa.328050.6	Cucsa.328050.6	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 89..431 score: 3.9
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 89..431 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.328050	Cla022044	Watermelon (97103) v1	cgywmB593
Cucsa.328050	MELO3C011401	Melon (DHL92) v3.5.1	cgymeB539
Cucsa.328050	ClCG08G010610	Watermelon (Charleston Gray)	cgywcgB565
Cucsa.328050	CSPI06G19880	Wild cucumber (PI 183967)	cgycpiB492
Cucsa.328050	CmaCh12G001140	Cucurbita maxima (Rimu)	cgycmaB0906
Cucsa.328050	CmaCh05G004590	Cucurbita maxima (Rimu)	cgycmaB0909
Cucsa.328050	CmoCh12G000950	Cucurbita moschata (Rifu)	cgycmoB0904
Cucsa.328050	CmoCh05G004840	Cucurbita moschata (Rifu)	cgycmoB0907
Cucsa.328050	Lsi08G009150	Bottle gourd (USVL1VR-Ls)	cgylsiB535
Cucsa.328050	Cp4.1LG11g04010	Cucurbita pepo (Zucchini)	cgycpeB0863
Cucsa.328050	Cp4.1LG07g01010	Cucurbita pepo (Zucchini)	cgycpeB0866
Cucsa.328050	MELO3C011401.2	Melon (DHL92) v3.6.1	cgymedB539
Cucsa.328050	CsaV3_6G033910	Cucumber (Chinese Long) v3	cgycucB508
Cucsa.328050	Cla97C08G153500	Watermelon (97103) v2	cgywmbB569
Cucsa.328050	Bhi04G000938	Wax gourd	cgywgoB662
Cucsa.328050	Carg09252	Silver-seed gourd	carcgyB0175
Cucsa.328050	Carg20572	Silver-seed gourd	carcgyB0729

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.328050	Cucumber (Chinese Long) v3	cgycucB507
Cucsa.328050	Cucumber (Gy14) v1	cgycgyB066
Cucsa.328050	Cucumber (Chinese Long) v2	cgycuB466
Cucsa.328050	Melon (DHL92) v3.5.1	cgymeB538
Cucsa.328050	Watermelon (Charleston Gray)	cgywcgB564
Cucsa.328050	Watermelon (97103) v1	cgywmB595