Carg09252 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09252
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	18S pre-ribosomal assembly protein gar2-related
Location	Cucurbita_argyrosperma_scaffold_018 : 223388 .. 225129 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTGCAGAAAGTGTTCTTCATTTACCATTCAATGACTAGTCCAAATTGTGTTCCAGAATCTCTCGAATGCAATTACAGTAAGTTGCAACACCGGGTCATGAGTATCAATCCAATTGGTCTCTCATGTCAAGAGAGGATAAACCAGGAGGATTCATCTCAATCTTCATATTTCTCTAGTGATGGGAATAGTTGCATGACTACAAAGATTAATGGCTCGTCTGTGGGTTGTTCTGTGGATAATGCAGATGGCATTAGTGCATTTGCTGCACCATCCAATATGAAACCCTTATTCTCATATGTGGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTATGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATTGATGAAGGGGTGACTTCTTTGGACAATTACTTCTTTAGGAGTAAGGACGAGAAGTCGATCTGCAAAATCGTGCCTCTGGAGAAAGATCAAACCAAAGGATCTGTAAAAGAACAAGAGAATTCTTCTGAGATGTCCAAATCCACAGCAGATGATCGAAAGGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGAAACAAAATTCAATCCGAGTGAGCCAAAAGTTTCGATGCATATTTCTAGCCAAAAGCTAGTTAAGAAAGGTTACTCTTCCGAGTCTTTCGACAACATGGGTGTCCAGGTATGCATATTTCTAGCCAAGTTACTAATCATGTCCTTTTGCACTTCTTGTTTGTTGTATTTTTAGTCTGCATATGTTGAAGATGGCTTTGAATTATAACCAATGCAATAAATTGGGTACTTTGAGTACAATGGCGAAGCAATTTTAGCTCTAGTGGCTCAAAACTTCTCATGTTTGATGCTTCTTAGACTTGGTTGATGTAGATTGAATTTCTTTTGATTGCAGATATCTGGTGAAAAAGAAAAGTCGGATGATCCCGATTCGGCTTCCAAGTCTGTTGAATCTTGCAATAGCAATTCTGCTCTGCGTTCTACAGCAGAACCACCAAAAGATGTCAACCGAACACATCAGTCAGCTTATAACAATGAATCTGAGAATGGAAGTATTGCATTTAATTTCAATTCGATCTCTCCCGTGGCCAATGGTGCAGAAGAACATCATGGAAATACCAACTTAAACTATCCTGCACCCATAACCAGCAGTGCAGTGACACAGGAGTGGCGTGGAAGCGATTCGGGAACACAAGTTTCAACCAATCTGGAATGTAGAACATCAGATAGTCGACAAATTTCAAGTCAGTCCACATACGACATAGGCGAGTCTAGTTTCTCTGCTGCAGATCCATTAGCTAGTCTTATTACTTACTCGGGGCCTGGAAGCGTCTCTCTTCGATCAGAAAGTAGCACAACGAGCACACGTTCTTTTGCCTTTCCCATGTAAGTTGCAATCTAACTTCACCTCTCAAGCTTCTTCCTTCATTTTTGATTCTTTTGCGCGGGTTTAGGAGACATGGGACTTAGGGAAACTCTGACTCCGGCTTCAGGCAAGGAGAATTAATCAGGGGATTGATCTTTCATTTTCCCCTATCCCTTTCTAAATTATAATCTAAGGTAAATTATATTACCTCTCTGGTTTATAGATTGCAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGAAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTTTGA

mRNA sequence

ATGTATCTGCAGAAAGTGTTCTTCATTTACCATTCAATGACTAGTCCAAATTGTGTTCCAGAATCTCTCGAATGCAATTACAGTAAGTTGCAACACCGGGTCATGAGTATCAATCCAATTGGTCTCTCATGTCAAGAGAGGATAAACCAGGAGGATTCATCTCAATCTTCATATTTCTCTAGTGATGGGAATAGTTGCATGACTACAAAGATTAATGGCTCGTCTGTGGGTTGTTCTGTGGATAATGCAGATGGCATTAGTGCATTTGCTGCACCATCCAATATGAAACCCTTATTCTCATATGTGGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTATGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATTGATGAAGGGGTGACTTCTTTGGACAATTACTTCTTTAGGAGTAAGGACGAGAAGTCGATCTGCAAAATCGTGCCTCTGGAGAAAGATCAAACCAAAGGATCTGTAAAAGAACAAGAGAATTCTTCTGAGATGTCCAAATCCACAGCAGATGATCGAAAGGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGAAACAAAATTCAATCCGAGTGAGCCAAAAGTTTCGATGCATATTTCTAGCCAAAAGCTAGTTAAGAAAGGTTACTCTTCCGAGTCTTTCGACAACATGGGTGTCCAGATATCTGGTGAAAAAGAAAAGTCGGATGATCCCGATTCGGCTTCCAAGTCTGTTGAATCTTGCAATAGCAATTCTGCTCTGCGTTCTACAGCAGAACCACCAAAAGATGTCAACCGAACACATCAGTCAGCTTATAACAATGAATCTGAGAATGGAAGTATTGCATTTAATTTCAATTCGATCTCTCCCGTGGCCAATGGTGCAGAAGAACATCATGGAAATACCAACTTAAACTATCCTGCACCCATAACCAGCAGTGCAGTGACACAGGAGTGGCGTGGAAGCGATTCGGGAACACAAGTTTCAACCAATCTGGAATGTAGAACATCAGATAGTCGACAAATTTCAAGTCAGTCCACATACGACATAGGCGAGTCTAGTTTCTCTGCTGCAGATCCATTAGCTAGTCTTATTACTTACTCGGGGCCTGGAAGCGTCTCTCTTCGATCAGAAAGTAGCACAACGAGCACACGTTCTTTTGCCTTTCCCATATTGCAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGAAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTTTGA

Coding sequence (CDS)

ATGTATCTGCAGAAAGTGTTCTTCATTTACCATTCAATGACTAGTCCAAATTGTGTTCCAGAATCTCTCGAATGCAATTACAGTAAGTTGCAACACCGGGTCATGAGTATCAATCCAATTGGTCTCTCATGTCAAGAGAGGATAAACCAGGAGGATTCATCTCAATCTTCATATTTCTCTAGTGATGGGAATAGTTGCATGACTACAAAGATTAATGGCTCGTCTGTGGGTTGTTCTGTGGATAATGCAGATGGCATTAGTGCATTTGCTGCACCATCCAATATGAAACCCTTATTCTCATATGTGGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTATGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATTGATGAAGGGGTGACTTCTTTGGACAATTACTTCTTTAGGAGTAAGGACGAGAAGTCGATCTGCAAAATCGTGCCTCTGGAGAAAGATCAAACCAAAGGATCTGTAAAAGAACAAGAGAATTCTTCTGAGATGTCCAAATCCACAGCAGATGATCGAAAGGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGAAACAAAATTCAATCCGAGTGAGCCAAAAGTTTCGATGCATATTTCTAGCCAAAAGCTAGTTAAGAAAGGTTACTCTTCCGAGTCTTTCGACAACATGGGTGTCCAGATATCTGGTGAAAAAGAAAAGTCGGATGATCCCGATTCGGCTTCCAAGTCTGTTGAATCTTGCAATAGCAATTCTGCTCTGCGTTCTACAGCAGAACCACCAAAAGATGTCAACCGAACACATCAGTCAGCTTATAACAATGAATCTGAGAATGGAAGTATTGCATTTAATTTCAATTCGATCTCTCCCGTGGCCAATGGTGCAGAAGAACATCATGGAAATACCAACTTAAACTATCCTGCACCCATAACCAGCAGTGCAGTGACACAGGAGTGGCGTGGAAGCGATTCGGGAACACAAGTTTCAACCAATCTGGAATGTAGAACATCAGATAGTCGACAAATTTCAAGTCAGTCCACATACGACATAGGCGAGTCTAGTTTCTCTGCTGCAGATCCATTAGCTAGTCTTATTACTTACTCGGGGCCTGGAAGCGTCTCTCTTCGATCAGAAAGTAGCACAACGAGCACACGTTCTTTTGCCTTTCCCATATTGCAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGAAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTTTGA

Protein sequence

MYLQKVFFIYHSMTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKINGSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFAMDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVANGAEEHHGNTNLNYPAPITSSAVTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGESSFSAADPLASLITYSGPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

Homology

[Close]

BLAST of Carg09252 vs. NCBI nr
Match: XP_022962453.1 (uncharacterized protein LOC111462884 [Cucurbita moschata] >XP_022962454.1 uncharacterized protein LOC111462884 [Cucurbita moschata])

HSP 1 Score: 806.2 bits (2081), Expect = 5.4e-230
Identity = 416/425 (97.88%), Postives = 418/425 (98.35%), Query Frame = 0


Query: 13  MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN 72
           MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN
Sbjct: 1   MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN 60

Query: 73  GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICID 132
           GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICID
Sbjct: 61  GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICID 120

Query: 133 EGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFA 192
           EGVTSLDNYFFRSKDEKSICKIVPLEKDQT+GSVKEQENSSEMSKS ADDRKVSLEDHFA
Sbjct: 121 EGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIADDRKVSLEDHFA 180

Query: 193 MDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSA 252
           MDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSA
Sbjct: 181 MDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSA 240

Query: 253 SKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVANGAEEHHGN 312
           SKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSI  VANG EEHHGN
Sbjct: 241 SKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSICSVANGVEEHHGN 300

Query: 313 TNLNYPAPITSSAVTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGESSFSAADPL 372
           TNLNYPAPITSSA TQEWRGSDSGTQVSTNLECRTSDSR +SSQSTYDIGESSFSAADPL
Sbjct: 301 TNLNYPAPITSSAGTQEWRGSDSGTQVSTNLECRTSDSRLVSSQSTYDIGESSFSAADPL 360

Query: 373 ASLITYSGPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 432
           ASLITYSGPGSVSLRSESSTTST SFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL
Sbjct: 361 ASLITYSGPGSVSLRSESSTTSTHSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 420

Query: 433 LCCRF 438
           LCCRF
Sbjct: 421 LCCRF 425

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BLAST of Carg09252 vs. NCBI nr
Match: XP_023547106.1 (uncharacterized protein LOC111806017 [Cucurbita pepo subsp. pepo] >XP_023547107.1 uncharacterized protein LOC111806017 [Cucurbita pepo subsp. pepo] >XP_023547108.1 uncharacterized protein LOC111806017 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 771.9 bits (1992), Expect = 1.1e-219
Identity = 404/425 (95.06%), Postives = 409/425 (96.24%), Query Frame = 0


Query: 13  MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN 72
           MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN
Sbjct: 1   MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN 60

Query: 73  GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICID 132
           GSSVGCSVDNAD ISAFAAPSNMKPLFSYVDKSVMECQMSKTI YDKEINVNDVKDICID
Sbjct: 61  GSSVGCSVDNADAISAFAAPSNMKPLFSYVDKSVMECQMSKTIAYDKEINVNDVKDICID 120

Query: 133 EGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFA 192
           EGVTSLDNYFFRSKDEKSICKIVPLEKDQT+GSVKEQENSSEMSKS ADD+KVSLEDHFA
Sbjct: 121 EGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIADDQKVSLEDHFA 180

Query: 193 MDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSA 252
           MDWTTHNDAK TKFNPSEPKVSM    QKLVKKGYSSESF+N+GVQISGEKEKSDDPDS 
Sbjct: 181 MDWTTHNDAKLTKFNPSEPKVSM----QKLVKKGYSSESFNNIGVQISGEKEKSDDPDSG 240

Query: 253 SKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVANGAEEHHGN 312
           SKSVESCNSNSAL STAEPPK VNRTHQSAYNNESENGSIA+NFNSISPV NGAEEHHGN
Sbjct: 241 SKSVESCNSNSALGSTAEPPKHVNRTHQSAYNNESENGSIAYNFNSISPVGNGAEEHHGN 300

Query: 313 TNLNYPAPITSSAVTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGESSFSAADPL 372
           TNLNYPAPITSSA TQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGE SFSAADPL
Sbjct: 301 TNLNYPAPITSSAGTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGECSFSAADPL 360

Query: 373 ASLITYSGPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 432
           ASLIT  GPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL
Sbjct: 361 ASLIT--GPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 419

Query: 433 LCCRF 438
           LCCRF
Sbjct: 421 LCCRF 419

[Close]

BLAST of Carg09252 vs. NCBI nr
Match: XP_022997158.1 (uncharacterized protein LOC111492143 [Cucurbita maxima] >XP_022997160.1 uncharacterized protein LOC111492143 [Cucurbita maxima] >XP_022997161.1 uncharacterized protein LOC111492143 [Cucurbita maxima])

HSP 1 Score: 770.4 bits (1988), Expect = 3.3e-219
Identity = 404/425 (95.06%), Postives = 408/425 (96.00%), Query Frame = 0


Query: 13  MTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKIN 72
           MTSPNCVPESLECNYSKLQHRVMS  PIGLSCQE+INQEDSSQSS FSSDGNSCMTTKIN
Sbjct: 1   MTSPNCVPESLECNYSKLQHRVMSNYPIGLSCQEKINQEDSSQSSCFSSDGNSCMTTKIN 60

Query: 73  GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICID 132
           GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVN+VKDICID
Sbjct: 61  GSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNEVKDICID 120

Query: 133 EGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFA 192
           EGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKS AD +KVSLEDHFA
Sbjct: 121 EGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSIADYQKVSLEDHFA 180

Query: 193 MDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSA 252
           MDW THNDAKETK NPSEPKVSM    QKLVKKGYSSESFDN GVQISGEKEKSDDPDSA
Sbjct: 181 MDWATHNDAKETKSNPSEPKVSM----QKLVKKGYSSESFDNKGVQISGEKEKSDDPDSA 240

Query: 253 SKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVANGAEEHHGN 312
           SKSVESCNSNSAL STAEPPKDVNRTHQSAYNNESENGSIAFNFN ISPVANGAEEHHGN
Sbjct: 241 SKSVESCNSNSALGSTAEPPKDVNRTHQSAYNNESENGSIAFNFNPISPVANGAEEHHGN 300

Query: 313 TNLNYPAPITSSAVTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGESSFSAADPL 372
           TNLN PAPITSSA TQEWRGSDSGTQVSTNLECRTSDSR +SSQSTYDIGESSFSAADPL
Sbjct: 301 TNLNNPAPITSSAGTQEWRGSDSGTQVSTNLECRTSDSRLVSSQSTYDIGESSFSAADPL 360

Query: 373 ASLITYSGPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 432
           ASLITYSGPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL
Sbjct: 361 ASLITYSGPGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 420

Query: 433 LCCRF 438
           LCCRF
Sbjct: 421 LCCRF 421

[Close]

BLAST of Carg09252 vs. NCBI nr
Match: XP_004144157.1 (PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657411.1 PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657412.1 PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657413.1 PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 1.4e-148
Identity = 310/444 (69.82%), Postives = 342/444 (77.03%), Query Frame = 0


Query: 10  YHSMTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCM 69
           YHSMTSPN  PESLECNYS   LQHRVM+ NP GLS Q++INQE+  QSS+ S DGNSCM
Sbjct: 10  YHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCM 69

Query: 70  TTKINGSSVGCSVD-NADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDV 129
            TKIN SS     D NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+E+NVNDV
Sbjct: 70  ITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDV 129

Query: 130 KDICIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVS 189
           KDICID+GV SL+N+FF+S  EKSI KI PLE+D+ +GS+KE+E SSE+SK  ADDRKVS
Sbjct: 130 KDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVS 189

Query: 190 LEDHFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQIS 249
           LEDHFAMDWTTHNDAK      E K N SEP++ M    QKLVK+ YSSES D +G+QIS
Sbjct: 190 LEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLM----QKLVKRSYSSESLDKIGLQIS 249

Query: 250 GEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSIS 309
           GEK   +DP SASKSV+SCN   AL S AEPPKD    H S YN+E ENGSIA  FNSIS
Sbjct: 250 GEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSIS 309

Query: 310 PVANGAEEHHGNTNLNYPAPITSSAVTQEWRG-SDS--GTQVSTNLECRTSDSRQISSQS 369
           PVANG EE                   QE  G SDS  GTQV TNLE RTSDSR +SSQ+
Sbjct: 310 PVANGGEER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQN 369

Query: 370 TYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTRSFAFPILQSEWNSSPVK 429
            +DIGESSFSA DPLASL+TYSGP    GS+SLRSESSTTSTRSFAFPILQSEWNSSPVK
Sbjct: 370 MHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVK 429

Query: 430 MVKAERRHYRKYRGWREGLLCCRF 438
           MVKAERRHYRKYRGWREGLLCC+F
Sbjct: 430 MVKAERRHYRKYRGWREGLLCCKF 431

[Close]

BLAST of Carg09252 vs. NCBI nr
Match: KGN47674.1 (hypothetical protein Csa_6G370190 [Cucumis sativus])

HSP 1 Score: 528.9 bits (1361), Expect = 1.7e-146
Identity = 307/441 (69.61%), Postives = 339/441 (76.87%), Query Frame = 0


Query: 13  MTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTK 72
           MTSPN  PESLECNYS   LQHRVM+ NP GLS Q++INQE+  QSS+ S DGNSCM TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INGSSVGCSVD-NADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDI 132
           IN SS     D NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLED 192
           CID+GV SL+N+FF+S  EKSI KI PLE+D+ +GS+KE+E SSE+SK  ADDRKVSLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEK 252
           HFAMDWTTHNDAK      E K N SEP++ M    QKLVK+ YSSES D +G+QISGEK
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLM----QKLVKRSYSSESLDKIGLQISGEK 240

Query: 253 EKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVA 312
              +DP SASKSV+SCN   AL S AEPPKD    H S YN+E ENGSIA  FNSISPVA
Sbjct: 241 TNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVA 300

Query: 313 NGAEEHHGNTNLNYPAPITSSAVTQEWRG-SDS--GTQVSTNLECRTSDSRQISSQSTYD 372
           NG EE                   QE  G SDS  GTQV TNLE RTSDSR +SSQ+ +D
Sbjct: 301 NGGEER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHD 360

Query: 373 IGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVK 432
           IGESSFSA DPLASL+TYSGP    GS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVK
Sbjct: 361 IGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVK 419

Query: 433 AERRHYRKYRGWREGLLCCRF 438
           AERRHYRKYRGWREGLLCC+F
Sbjct: 421 AERRHYRKYRGWREGLLCCKF 419

[Close]

BLAST of Carg09252 vs. TAIR10
Match: AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 95/367 (25.89%), Postives = 136/367 (37.06%), Query Frame = 0


Query: 91  APSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFFRSKDEKS 150
           +P    P+F Y+DK+V  C + + +V  KE   + VKDIC+DEGV   + + F  KD   
Sbjct: 81  SPEKKDPVF-YMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLFGEKDSVK 140

Query: 151 ICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFAMDWTTHNDAKETK---FN 210
                 L K         +  S+E S S  DD        F  D  T  D +E+    F 
Sbjct: 141 SSSTEDLMKADKTNVNPSETKSAEDSISKVDD------SEFCNDHKTDRDVEESSGEDFA 200

Query: 211 PSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKEKSDDPDSASKSVES--CNSNSAL 270
            +E   S +     +V +   +     +        E S D  + S+  +S  C +   +
Sbjct: 201 DAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDSKECLTLGDI 260

Query: 271 RSTAEPPKDVNR----THQSAYNNESENGSIAFNFNSISPVANGAEEHHGNTNLNYPAPI 330
            S  +  K +N+                                                
Sbjct: 261 LSREDEQKSLNQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 320

Query: 331 TSSAVTQEWRGS-----DSGTQVSTNLECRTSDSRQISSQSTYDIGESSFSAADPLASLI 390
            S+  +QE   +        T+      C   +S +    S+   GE+SFSAAD      
Sbjct: 321 XSTTTSQEPNKTCNEPEKPETENHHQQNCLVENSYEDDKFSSSRFGETSFSAADXXXXXX 380

Query: 391 TYSGPGSVSLRSESSTTST------RSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWRE 438
                                    RSFAFPILQSEWNSSPV+M KA++R  R+  GWR 
Sbjct: 381 XXXXXXXXXXXXXXXXXXXXXXXXGRSFAFPILQSEWNSSPVRMAKADKR--RQKGGWRH 438

[Close]

BLAST of Carg09252 vs. TrEMBL
Match: tr|A0A0A0KFP8|A0A0A0KFP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G370190 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.1e-146
Identity = 307/441 (69.61%), Postives = 339/441 (76.87%), Query Frame = 0


Query: 13  MTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTK 72
           MTSPN  PESLECNYS   LQHRVM+ NP GLS Q++INQE+  QSS+ S DGNSCM TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INGSSVGCSVD-NADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDI 132
           IN SS     D NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLED 192
           CID+GV SL+N+FF+S  EKSI KI PLE+D+ +GS+KE+E SSE+SK  ADDRKVSLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEK 252
           HFAMDWTTHNDAK      E K N SEP++ M    QKLVK+ YSSES D +G+QISGEK
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLM----QKLVKRSYSSESLDKIGLQISGEK 240

Query: 253 EKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVA 312
              +DP SASKSV+SCN   AL S AEPPKD    H S YN+E ENGSIA  FNSISPVA
Sbjct: 241 TNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNSISPVA 300

Query: 313 NGAEEHHGNTNLNYPAPITSSAVTQEWRG-SDS--GTQVSTNLECRTSDSRQISSQSTYD 372
           NG EE                   QE  G SDS  GTQV TNLE RTSDSR +SSQ+ +D
Sbjct: 301 NGGEER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHD 360

Query: 373 IGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVK 432
           IGESSFSA DPLASL+TYSGP    GS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVK
Sbjct: 361 IGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVK 419

Query: 433 AERRHYRKYRGWREGLLCCRF 438
           AERRHYRKYRGWREGLLCC+F
Sbjct: 421 AERRHYRKYRGWREGLLCCKF 419

[Close]

BLAST of Carg09252 vs. TrEMBL
Match: tr|A0A1S3BDI6|A0A1S3BDI6_CUCME (uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.5e-146
Identity = 310/452 (68.58%), Postives = 338/452 (74.78%), Query Frame = 0


Query: 1   MYLQKVFFIYHSMTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSY 60
           M L+     Y+SMTS N  PESLECNYS   LQHRVMS NP  LSCQE+INQE+  QSS+
Sbjct: 1   MKLESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSH 60

Query: 61  FSSDGNSCMTTKINGSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYD 120
            S DGN CM TKIN SS     +NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D
Sbjct: 61  SSCDGNICMITKINRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCD 120

Query: 121 KEINVNDVKDICIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKS 180
           +EINVNDVKDICIDEGV SL+N+FF+S  EKSI KI PLE+D+ +GS+KE+E S E+SK 
Sbjct: 121 QEINVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKF 180

Query: 181 TADDRKVSLEDHFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESF 240
            ADD KVSLEDHFAMDWTTHNDAK      E K N SEP+V M    QKLVKK  SSES 
Sbjct: 181 IADDHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLM----QKLVKKSCSSESL 240

Query: 241 DNMGVQISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSI 300
           D +GVQISGEK   +DP SASKSV+SCN   AL S AEPP      H S YN+E ENGSI
Sbjct: 241 DKIGVQISGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAAHPSGYNDEFENGSI 300

Query: 301 AFNFNSISPVANGAEEHHGNTNLNYPAPITSSAVTQEWRG-SDS--GTQVSTNLECRTSD 360
           A   NSISPVANG EEH                  QE  G SDS  GTQVSTNLE RTSD
Sbjct: 301 ALTLNSISPVANGGEEH------------------QECCGRSDSVIGTQVSTNLEYRTSD 360

Query: 361 SRQISSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTRSFAFPILQS 420
           SR +SSQ+  DIGESSFSA DPLASL+TYSGP    GS+SLRSESSTTSTRSFAFPILQ+
Sbjct: 361 SRLLSSQNMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQT 420

Query: 421 EWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 438
           EWNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 EWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 430

[Close]

BLAST of Carg09252 vs. TrEMBL
Match: tr|A0A1S3BCP3|A0A1S3BCP3_CUCME (uncharacterized protein LOC103488449 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 6.1e-145
Identity = 306/440 (69.55%), Postives = 332/440 (75.45%), Query Frame = 0


Query: 13  MTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTK 72
           MTS N  PESLECNYS   LQHRVMS NP  LSCQE+INQE+  QSS+ S DGN CM TK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 73  INGSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDIC 132
           IN SS     +NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+EINVNDVKDIC
Sbjct: 61  INRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDIC 120

Query: 133 IDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDH 192
           IDEGV SL+N+FF+S  EKSI KI PLE+D+ +GS+KE+E S E+SK  ADD KVSLEDH
Sbjct: 121 IDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIADDHKVSLEDH 180

Query: 193 FAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQISGEKE 252
           FAMDWTTHNDAK      E K N SEP+V M    QKLVKK  SSES D +GVQISGEK 
Sbjct: 181 FAMDWTTHNDAKDLTQIEEEKLNLSEPEVLM----QKLVKKSCSSESLDKIGVQISGEKA 240

Query: 253 KSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVAN 312
             +DP SASKSV+SCN   AL S AEPP      H S YN+E ENGSIA   NSISPVAN
Sbjct: 241 NLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAAHPSGYNDEFENGSIALTLNSISPVAN 300

Query: 313 GAEEHHGNTNLNYPAPITSSAVTQEWRG-SDS--GTQVSTNLECRTSDSRQISSQSTYDI 372
           G EEH                  QE  G SDS  GTQVSTNLE RTSDSR +SSQ+  DI
Sbjct: 301 GGEEH------------------QECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDI 360

Query: 373 GESSFSAADPLASLITYSGP----GSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKA 432
           GESSFSA DPLASL+TYSGP    GS+SLRSESSTTSTRSFAFPILQ+EWNSSPVKMVKA
Sbjct: 361 GESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSPVKMVKA 418

Query: 433 ERRHYRKYRGWREGLLCCRF 438
           ERRHYRKYRGWREGLLCC+F
Sbjct: 421 ERRHYRKYRGWREGLLCCKF 418

[Close]

BLAST of Carg09252 vs. TrEMBL
Match: tr|A0A2I4HW60|A0A2I4HW60_9ROSI (uncharacterized protein LOC109022047 isoform X3 OS=Juglans regia OX=51240 GN=LOC109022047 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.7e-34
Identity = 152/494 (30.77%), Postives = 226/494 (45.75%), Query Frame = 0


Query: 29  KLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKI--NGSSVGCSVDNADGI 88
           K Q+ +M+ N   L C  + +++D+   S  ++DG+     K   + S V  + +N D +
Sbjct: 35  KSQNLIMTENQ-SLLCDLKGDEKDAVPFSNATNDGDGWTAIKFDCSMSMVDINNENKDEV 94

Query: 89  SAFAAPSNM---------KPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTS 148
             F A  N          K L   +DK VMEC++ +  V  K    + VKDIC+DEGV S
Sbjct: 95  KDFVALHNQSSQKTESFDKDLHFVMDKGVMECELPELTVCYKGSTYHVVKDICVDEGVHS 154

Query: 149 LDNYFFRS-KDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFAMDWT 208
            +   F S +D+K++C ++P +KDQ K   KE+E   ++  S  D    S E++   D T
Sbjct: 155 REKILFESGRDKKTVCIVLPPDKDQNKELAKEKE---DIDISGPDGLNFSAENYSDKDST 214

Query: 209 THNDAKETKFNPSEPKVSMHISSQK----------LVKKGYSSESFDNMG---------- 268
              D+K++     +   S+   + K          +V  G  +  FD +           
Sbjct: 215 NQYDSKDSMQTGEDATGSILTDASKKMFFPGNMLPMVASGVCASQFDCLSNDSNKVEQQP 274

Query: 269 VQISGEKEKSDDPDSASKSVESCNSNS--------------------------------- 328
            Q+ GE+     P   S   ES NS+                                  
Sbjct: 275 FQVYGERPILAGPALVSAVEESNNSSGNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 334

Query: 329 ----------------ALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVANGAE 388
                                          ++  YN++ E+GSI F+F+S+ P  +G  
Sbjct: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNELFYNSKVESGSITFDFDSLEPSDSGRL 394

Query: 389 EHHGNTNLNYPAPITSSAVTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGESSFS 438
           E   N +       +    TQ+    ++G   +  +  R   +   +S S    GE S S
Sbjct: 395 EGLENGD-------SECHETQKTSKVENGLSDAHTVSRRHQHALGETSFSAVGRGEESCS 454

[Close]

BLAST of Carg09252 vs. TrEMBL
Match: tr|A0A2I4HW68|A0A2I4HW68_9ROSI (uncharacterized protein LOC109022047 isoform X1 OS=Juglans regia OX=51240 GN=LOC109022047 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.7e-34
Identity = 152/494 (30.77%), Postives = 226/494 (45.75%), Query Frame = 0


Query: 29  KLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTKI--NGSSVGCSVDNADGI 88
           K Q+ +M+ N   L C  + +++D+   S  ++DG+     K   + S V  + +N D +
Sbjct: 85  KSQNLIMTENQ-SLLCDLKGDEKDAVPFSNATNDGDGWTAIKFDCSMSMVDINNENKDEV 144

Query: 89  SAFAAPSNM---------KPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTS 148
             F A  N          K L   +DK VMEC++ +  V  K    + VKDIC+DEGV S
Sbjct: 145 KDFVALHNQSSQKTESFDKDLHFVMDKGVMECELPELTVCYKGSTYHVVKDICVDEGVHS 204

Query: 149 LDNYFFRS-KDEKSICKIVPLEKDQTKGSVKEQENSSEMSKSTADDRKVSLEDHFAMDWT 208
            +   F S +D+K++C ++P +KDQ K   KE+E   ++  S  D    S E++   D T
Sbjct: 205 REKILFESGRDKKTVCIVLPPDKDQNKELAKEKE---DIDISGPDGLNFSAENYSDKDST 264

Query: 209 THNDAKETKFNPSEPKVSMHISSQK----------LVKKGYSSESFDNMG---------- 268
              D+K++     +   S+   + K          +V  G  +  FD +           
Sbjct: 265 NQYDSKDSMQTGEDATGSILTDASKKMFFPGNMLPMVASGVCASQFDCLSNDSNKVEQQP 324

Query: 269 VQISGEKEKSDDPDSASKSVESCNSNS--------------------------------- 328
            Q+ GE+     P   S   ES NS+                                  
Sbjct: 325 FQVYGERPILAGPALVSAVEESNNSSGNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 384

Query: 329 ----------------ALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSISPVANGAE 388
                                          ++  YN++ E+GSI F+F+S+ P  +G  
Sbjct: 385 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNELFYNSKVESGSITFDFDSLEPSDSGRL 444

Query: 389 EHHGNTNLNYPAPITSSAVTQEWRGSDSGTQVSTNLECRTSDSRQISSQSTYDIGESSFS 438
           E   N +       +    TQ+    ++G   +  +  R   +   +S S    GE S S
Sbjct: 445 EGLENGD-------SECHETQKTSKVENGLSDAHTVSRRHQHALGETSFSAVGRGEESCS 504

The following BLAST results are available for this feature:

BLAST of Carg09252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962453.1	5.4e-230	97.88	uncharacterized protein LOC111462884 [Cucurbita moschata] >XP_022962454.1 unchar...	[more]
XP_023547106.1	1.1e-219	95.06	uncharacterized protein LOC111806017 [Cucurbita pepo subsp. pepo] >XP_023547107....	[more]
XP_022997158.1	3.3e-219	95.06	uncharacterized protein LOC111492143 [Cucurbita maxima] >XP_022997160.1 uncharac...	[more]
XP_004144157.1	1.4e-148	69.82	PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657411....	[more]
KGN47674.1	1.7e-146	69.61	hypothetical protein Csa_6G370190 [Cucumis sativus]	[more]

BLAST of Carg09252 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03810.1	1.6e-10	25.89	18S pre-ribosomal assembly protein gar2-related	[more]

BLAST of Carg09252 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09252 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KFP8\|A0A0A0KFP8_CUCSA	1.1e-146	69.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G370190 PE=4 SV=1	[more]
tr\|A0A1S3BDI6\|A0A1S3BDI6_CUCME	2.5e-146	68.58	uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BCP3\|A0A1S3BCP3_CUCME	6.1e-145	69.55	uncharacterized protein LOC103488449 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4HW60\|A0A2I4HW60_9ROSI	5.7e-34	30.77	uncharacterized protein LOC109022047 isoform X3 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4HW68\|A0A2I4HW68_9ROSI	5.7e-34	30.77	uncharacterized protein LOC109022047 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09252-RA	Carg09252-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..280
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 100..233 coord: 167..437
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 100..233 coord: 167..437

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09252	Cla022044	Watermelon (97103) v1	carwmB0134
Carg09252	MELO3C011401	Melon (DHL92) v3.5.1	carmeB0142
Carg09252	ClCG08G010610	Watermelon (Charleston Gray)	carwcgB0138
Carg09252	CSPI06G19880	Wild cucumber (PI 183967)	carcpiB0163
Carg09252	Cucsa.328050	Cucumber (Gy14) v1	carcgyB0175
Carg09252	CmaCh05G004590	Cucurbita maxima (Rimu)	carcmaB0189
Carg09252	CmaCh12G001140	Cucurbita maxima (Rimu)	carcmaB0185
Carg09252	CmoCh05G004840	Cucurbita moschata (Rifu)	carcmoB0196
Carg09252	CmoCh12G000950	Cucurbita moschata (Rifu)	carcmoB0194
Carg09252	Lsi08G009150	Bottle gourd (USVL1VR-Ls)	carlsiB129
Carg09252	Cp4.1LG07g01010	Cucurbita pepo (Zucchini)	carcpeB0207
Carg09252	Cp4.1LG11g04010	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09252	CsGy6G019410	Cucumber (Gy14) v2	carcgybB0156
Carg09252	MELO3C011401.2	Melon (DHL92) v3.6.1	carmedB0146
Carg09252	CsaV3_6G033910	Cucumber (Chinese Long) v3	carcucB0166
Carg09252	Cla97C08G153500	Watermelon (97103) v2	carwmbB0150
Carg09252	Bhi04G000938	Wax gourd	carwgoB0177

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09252	Carg20572	Silver-seed gourd	carcarB164

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09252	Cucumber (Chinese Long) v2	carcuB0158