Cp4.1LG07g01010 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g01010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	18S pre-ribosomal assembly protein gar2
Location	Cp4.1LG07 : 501865 .. 506338 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTAGTTCAAAAAGAAAAAAAAGTGCATATTAAAACATTTGGCGACGAAGAAATGGATTCTGTAGAAACTACTGCAGTTGCCGCTTACGAATTGCCGGAGTTGCAGTAATTCCCGGTGAGTTCGATTTTCCGGCGAGAGTTATTATGAAATTTACCGGCTGGTATATGATGTTGTATTGAGAATTTATATTTGATTTGTGAACACCTGAAGAATTCTCGAAGAGTTCAGTCACCGAAGTTCACAATAATAATAACTTCATTCAATTACGATACACGGAATTGAAGAATCGGAGAAGAACAGAGGACGCATTTTCGATTGTTCTGGTGCGGTGATCGGCGACGTAGCATACGGCGGAGCTTCGGCGAAGGAGGAGGAGGAGGAGGAGGAGCAGGTTATTGATTTGGTAAGTAATTTGAAGTTGAAAGAAAAGAGCGGGGTTAGGTTTATGTGTTAACTGAACGGAATATAATTGAATACTAAAACCTGCGGAGTATTAATTAGGGATCGTAGTTGGTAAGCGCATTTGTTTTTCTCTTGCTTTATTAATTGCAATGAGAGAGATAGAGAGAGAAGTTCTGTATAATCTGCCATGGCAGGAAGCCCTTTTTGAAGCTGTTAACAGAAATTACCAGTTCCGTTCGTTCTTTCTCTCTGTTCCATAAATTCAATCACCAAACTAGGGCGCTCCTTCAGTCCCTTTTTACAGTCTTCCTCTTGATGTTTCTTGTTCATTTATTCATTTTATATTATCAGGGGGTTTCTGTCTCAATTTTATCGACTCTTCCCCATCTGTGTTTCAGGTTTTCATATGGATTTTGATACTTTTGTTCTTCATAATTTCTCGTTTAACCCTATATTCTATTGTTGTTTGAATTCTTTTCACTTTTCTGTCTGCATATATTCCTTTTTCCTGTTCTCTGATGTTTTGAATTCTTTCTGTTCATTTACTTTCCTTTTCCCCCCCTTGAGACTGAAGTGGAGGTTGAGGGTTGGGGTTGATTTCATCATTAGTTGAAGATAAAGGAGAATGGGTGGGGGAATTTTGATAAAGGGTGATTTCATACACTTTTTCTTTTGTTAATCATTTTGAGTTATGATGTTTCTGTTGAAAGTTTGGTTTGCTTTTCAAAAGTTCTTCCAACTTTTTTACCACTCGTTCTTCTCTTTTATATTTTTGAGTACTGGTAACAAGCTTTGGATTCCCAGCACGTATAGCCCAGAGAATTTTCTTTAATTATGTTTTAAAGCAAGATATCCTATGATAACGACTGTAATAATGACCTTTATGTGCTCTTTACAGGATGATCAATTTGGTCTTAATATTTCTGATTGTTGTTGATTTGATTGGTTAAGCTTTCTTTGTTGAGATTTAGTTAAGTTTTCATACAAAACTCGCTGCTTTTTATAGAAAAATACGAATATCGATCTGCTGATTCTATATGGTTCTTAAATGAGTGATTCTGGAGTGGCCGGACCTCGGCACCTAGTCAATCACCTAGGAGCTGACATGTTGTTCATTGTATCCCTAACTGTTGGAATAGTTGGCTTTTGCCAGTTTGTACTCACCTTTTTCTCTTTATTATCATTCAAATAGATTTGCCTGTTCTGCTTCAGAATAATTCAGATATAACAATTTCTGAGGAGAATATTTAGGAGACGATTCATTACTTTGGAATAACTACTGTTCTTCACTTTGTTTAAGTATCAAGCTGGTTATGAAGTTGTTATGTTTGATTGCTCGTACAACGGTGGACTACAAAATTTATATTTGTCTCTTTCTCTAACCTCATCCTTTTTCTTCGTTCTCTCATTCACAGAAGTTTACAGAGTTGTAGAATTTCTGTTTTAATTCATTGATGTTTTATGGCAGGTTTGCTTAGGGATAGACCCTATCTTTCCTGAAGTTTGATTCTTTTGAAGATCATTTTGCCTCCATGGCGTGTATTAACAATGAAACTGGGTAACAACAATTTCTTTTGTGTTGTATTATTCTACTTGAAAGTTCTTCATTTTTATTACTGTTATTATTCCCTCTTTGCTTTTCTACCCAATGATCTTATGTTGTTTTGTAAAAGGAAAGATTATTTACTATCGTTTTCGTGCTATTTACGCTCGTCAATCTACTGCCTTTTGTCCAACTTGCTGTTCTAAGTTACATTTGTAATTATGTATCTGCAGAAAGTGACCCTCCATTTTACTCTTCAATGACCAGCTCAGATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCAAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCGGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCTGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGAAAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCCAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAACCTAGGTATCCAGGTATGCATATTTCTGGTCAAGTTATTAATCATGTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACCCTTTATAAATGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGAAACTCCAAAAGGGAAAGCCCAAAGAAGACAGTATTTGCTAACGGTGAGCTTGGTCTGTTACAAATGGTATCAGAGCCAGACACCGAGCGGTGTGCTAGCGAGAATGCTGGGTTTCAAAGGGGGGTGAATTGTGAGATTCCACATCGGTTGGAGAGGAGAACGAACACTATTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGCATTTTAAAAACCTCGAGGAAAAGCCCAAAGAAGACAATATCTACTAGCGGTGGGTTTGGGCTTGAACTGTTACACATGTTCCTCTTGCACTTCATGTTCTATTTCCAACGTTGAAATATATAATTAGGATAGAATATTGAAGCCCTTTTAGCTCAAGTGATTCTGAACTTTTCAGGTTTGATGTTTTTCAGAATTGGTTGATGTAGGTTGGATTTCTTGTGATGGCAGATATCTAGTGAAAAAGGCAACTCGGAAGACCCTGCTTCAGCTTTCAAACCCGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACACCCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGCCAATGCTGAAGAAGAACTCCATGGAAATATCAACTCAGACTACCCAGGACCCAAGACCAGTAGCGCTGGGACACAGGAGTGTTATGGAAGTAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATGTAAGTAGCAAGCAATCTCTCTTCTCTTCTTGATCTATCCTGTCCTAAATTGTAATCCAAGGTGAATGATATTTACAGATTACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAAAGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGCTATCAGTAGAGGTAGATTCTGTTCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATATCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTGTATAAGAACACGATATGACATAGTTTCTCTGCATAGAATGATATTATCAAAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAATTCTTTCATTTGATAAGAAAAGTCGTTCTCTTGAAGAAATTGTCCACCATTAAT

mRNA sequence

ATGAATTATTGCCGCTTACGAATTGCCGGAGTTGCAGTAATTCCCGAATCGGAGAAGAACAGAGGACGCATTTTCGATTGTTCTGGTGCGGTGATCGGCGACGTAGCATACGGCGGAGCTTCGGCGAAGGAGGAGGAGGAGGAGGAGGAGCAGGAAGCCCTTTTTGAAGCTGTTAACAGAAATTACCAGTTCCGTTCGGGGTTTCTGTCTCAATTTTATCGACTCTTCCCCATCTGTGTTTCAGAAAGTGACCCTCCATTTTACTCTTCAATGACCAGCTCAGATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCAAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCGGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCTGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGAAAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCCAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAATATCTAGTGAAAAAGGCAACTCGGAAGACCCTGCTTCAGCTTTCAAACCCGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACACCCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGCCAATGCTGAAGAAGAACTCCATGGAAATATCAACTCAGACTACCCAGGACCCAAGACCAGTAGCGCTGGGACACAGGAGTGTTATGGAAGTAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAAAGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGCTATCAGTAGAGGTAGATTCTGTTCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATATCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTGTATAAGAACACGATATGACATAGTTTCTCTGCATAGAATGATATTATCAAAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAATTCTTTCATTTGATAAGAAAAGTCGTTCTCTTGAAGAAATTGTCCACCATTAAT

Coding sequence (CDS)

ATGAATTATTGCCGCTTACGAATTGCCGGAGTTGCAGTAATTCCCGAATCGGAGAAGAACAGAGGACGCATTTTCGATTGTTCTGGTGCGGTGATCGGCGACGTAGCATACGGCGGAGCTTCGGCGAAGGAGGAGGAGGAGGAGGAGGAGCAGGAAGCCCTTTTTGAAGCTGTTAACAGAAATTACCAGTTCCGTTCGGGGTTTCTGTCTCAATTTTATCGACTCTTCCCCATCTGTGTTTCAGAAAGTGACCCTCCATTTTACTCTTCAATGACCAGCTCAGATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCAAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCGGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCTGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGAAAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCCAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAATATCTAGTGAAAAAGGCAACTCGGAAGACCCTGCTTCAGCTTTCAAACCCGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACACCCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGCCAATGCTGAAGAAGAACTCCATGGAAATATCAACTCAGACTACCCAGGACCCAAGACCAGTAGCGCTGGGACACAGGAGTGTTATGGAAGTAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAAAGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGA

Protein sequence

MNYCRLRIAGVAVIPESEKNRGRIFDCSGAVIGDVAYGGASAKEEEEEEEQEALFEAVNRNYQFRSGFLSQFYRLFPICVSESDPPFYSSMTSSDCVPESIECNYNTELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLISSEKGNSEDPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNSISPMANAEEELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

Homology

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BLAST of Cp4.1LG07g01010 vs. TrEMBL
Match: A0A0A0KFP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.0e-134
Identity = 279/438 (63.70%), Postives = 321/438 (73.29%), Query Frame = 1


Query: 91  MTSSDCVPESIECNYN-TELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTGGGNSCLTTK 150
           MTS +  PES+ECNY+ T LQH++++ +P GL  Q+KIN E+ +QS  S+  GNSC+ TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 151 INHSSVDCFDDN-AEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDI 210
           IN SS D FDDN AEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 211 CIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIADNKKISLED 270
           CID+GV SL NF F+ST EKS  K  PL +  NEGSIKE++ SSEV + IAD++K+SLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 271 HFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKL----------------ISSEKGNSE 330
           HFA DW+THNDAKDL QIEE KLN SEP++ +QKL                IS EK N E
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 331 DPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNSISPMANAE 390
           DP+SA K V+SCND  AL + AE P +NIP  HPS +N+EFE GS  L  NSISP+AN  
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPA-HPSGYNDEFENGSIALTFNSISPVANGG 300

Query: 391 EELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVST--------SRLISSQTAHDSGE 450
           EE                   QEC G +DS  GTQV T        SRL+SSQ  HD GE
Sbjct: 301 EE------------------RQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGE 360

Query: 451 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 501
           SSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 361 SSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 419

[Close]

BLAST of Cp4.1LG07g01010 vs. TrEMBL
Match: A0A022QJK2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006975mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 137/410 (33.41%), Postives = 196/410 (47.80%), Query Frame = 1


Query: 127 INHEDAIQSPSSTGGGNSCLTTK----INHSSVDC----FDDNAEGINAFMSSSGKKSSD 186
           I+H         +   N+C   K    + H ++ C      D++   N+    S    ++
Sbjct: 26  IDHLSGSDKDLDSLSSNTCDKDKERQNLGHENMPCNGNESQDSSPPCNSASGLSQTTDAN 85

Query: 187 SYVDKSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRS--TDEKSSYKTLPL 246
            + DK+V+EC M +  V  KEI+   VKDIC+DEG P   + I  S   D+       P 
Sbjct: 86  LFTDKNVLECGMPEFEVFCKEIDYQIVKDICVDEGRPDNKDKITESCKDDKSDGLFHQPT 145

Query: 247 NQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHN-DAKDLNQIEEAKLNQSEPQ 306
           N N   I   + +    +   D K  S +  F  D +  + D     Q  E   NQ E  
Sbjct: 146 NSNHSEITITEANQCGTKEENDGKSPS-DTSFDEDTAKKDCDPAKSVQTSEITDNQEEDS 205

Query: 307 V-----PVQKLIS------------SEKGNSEDPASAF---KPVESCNDNSALGTEAESP 366
           +     PVQ+L++             E G    P       KP    +  ++   EAE  
Sbjct: 206 LVGIKPPVQELVTRNSLRSFLYPLGDEGGVVTQPPDQILNEKPASRSSAATSSSAEAEGV 265

Query: 367 NENIPTQHPSAHNNEFEKGSTTLNLNS-----ISPMANAEEELHGNINSDYPGPKTSSAG 426
            E++       +N+E E G+ T N +S     + P  + +     + N D  G       
Sbjct: 266 EEDVEASSSVLYNSEVESGTITFNFDSTVTENMKPQDSVDSSSVTSNNIDCVG------S 325

Query: 427 TQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLR 486
           +++    N+        +S +IS Q  ++ GE+SF+A    ASLVTYSGPIAYSGS+SLR
Sbjct: 326 SKDREDENEKNSEQNEGSSAIISRQMKYEEGETSFAA----ASLVTYSGPIAYSGSLSLR 385

Query: 487 SESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 501
           S+ S  S RSFAFPILQSEWNSSPV+M KA+RRH+RK++GWR GLLCCRF
Sbjct: 386 SDGSAASGRSFAFPILQSEWNSSPVRMAKADRRHFRKHKGWRSGLLCCRF 424

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BLAST of Cp4.1LG07g01010 vs. TrEMBL
Match: A0A068TX06_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032430001 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32
Identity = 147/450 (32.67%), Postives = 211/450 (46.89%), Query Frame = 1


Query: 125 EKINHEDAIQSPSSTGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDS--YVD 184
           E  +HED +  PSS    +S +      S       ++E +   +SS     SDS  Y D
Sbjct: 111 ELSDHEDKL--PSSPKFESSIIVDGEKESR------DSEKLCTNVSSLFVSESDSRRYTD 170

Query: 185 KSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPL---NQN 244
           KSV E ++S   VC ++ N   VKDIC+DEG+P+    +  +  +       P    +Q+
Sbjct: 171 KSVREWELS---VCYRDSNYQIVKDICVDEGLPTQDKTLIEAEKDGHPGMLTPQPCQDQH 230

Query: 245 EGSIK------------EQKNSSEVLESIA----------------DNKKISLEDHFATD 304
            G+I+            +     ++  S++                +  K SLE+H   D
Sbjct: 231 SGTIRGCHDTEPGQDGLKASTVDDITNSVSIDCGAKVEVDISTFFMEGSKSSLEEHAGKD 290

Query: 305 -----------------WS-THNDAKDLNQIEEAKLN-----QSEPQVPVQKLISSEKGN 364
                            WS T   A D+++ E A ++     +S  Q  +Q L + +   
Sbjct: 291 ATKVRGPGNVTQMGEANWSSTERRADDVSEDESAVISGRSSQESVVQDSIQLLSNCDGNK 350

Query: 365 SEDPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNSISPMA- 424
           +         V+S  ++ A+   A++  ++  T +   +N++ E G+ T +  S  P   
Sbjct: 351 APKQLDEVPSVDSILESLAVAFTADASKKS-GTANNLHYNSKVESGTITFDFKSPKPAID 410

Query: 425 --------NAEEEL---HGNINSDYPGPKTSSAGTQECYGSNDSAFGT------QVSTSR 484
                   N+ EE+    G +N         SA   EC  S D    T      Q   + 
Sbjct: 411 SHADESGENSHEEVLKSEGVLNHKQENLTDQSAALIECGSSTDKNETTVHEPKAQQQDAV 470

Query: 485 LISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEW 501
              SQ     GESSFS+  PL+ L+TYSGPIAYSGS SLRS+SSTTSTRSFAFPILQSEW
Sbjct: 471 DHPSQVHRGGGESSFSSTGPLSGLITYSGPIAYSGSTSLRSDSSTTSTRSFAFPILQSEW 530

[Close]

BLAST of Cp4.1LG07g01010 vs. TrEMBL
Match: A0A061E9F2_THECC (18S pre-ribosomal assembly protein gar2-related, putative isoform 1 OS=Theobroma cacao GN=TCM_011444 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.3e-32
Identity = 93/222 (41.89%), Postives = 137/222 (61.71%), Query Frame = 1


Query: 281 LNQIEEAKLNQSEPQVPVQKLISS--EKGNSEDPASAFKPVESCNDNSALGTEAESPNEN 340
           ++ +EE+K +  E  V V  L+S+  E  + +  A    P +       + T  ES + +
Sbjct: 330 VSAVEESKDSNEEAIVSVPALVSATEELDSGKGEAILISPAQ-------VSTSEESTSSS 389

Query: 341 IPTQHPSAHNNEFEKGSTTLNLNSISPMANAEEELHGNINSDYPGPKTSSAGTQECYGSN 400
           +  +   +++N+ E GS T NL+S +P  ++++E H N++S+  G  ++           
Sbjct: 390 LVNE--VSYDNKLETGSITFNLDSSAP-TSSKDECHHNLDSEPLGTGSTPK--------- 449

Query: 401 DSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTST 460
                 +V+  + IS+      GESSFSA   +  L++YSGP+AYSGS+SLRS+SSTTST
Sbjct: 450 -----LEVAADQSISNNLQQGIGESSFSAAGLVTGLISYSGPVAYSGSLSLRSDSSTTST 509

Query: 461 RSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 501
           RSFAFPILQSEWN SPV+M KA+RRHYRK++GWR GLLCCRF
Sbjct: 510 RSFAFPILQSEWNCSPVRMAKADRRHYRKHKGWRHGLLCCRF 527

[Close]

BLAST of Cp4.1LG07g01010 vs. TrEMBL
Match: A0A061EGZ8_THECC (18S pre-ribosomal assembly protein gar2-related, putative isoform 2 OS=Theobroma cacao GN=TCM_011444 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.3e-32
Identity = 93/222 (41.89%), Postives = 137/222 (61.71%), Query Frame = 1


Query: 281 LNQIEEAKLNQSEPQVPVQKLISS--EKGNSEDPASAFKPVESCNDNSALGTEAESPNEN 340
           ++ +EE+K +  E  V V  L+S+  E  + +  A    P +       + T  ES + +
Sbjct: 273 VSAVEESKDSNEEAIVSVPALVSATEELDSGKGEAILISPAQ-------VSTSEESTSSS 332

Query: 341 IPTQHPSAHNNEFEKGSTTLNLNSISPMANAEEELHGNINSDYPGPKTSSAGTQECYGSN 400
           +  +   +++N+ E GS T NL+S +P  ++++E H N++S+  G  ++           
Sbjct: 333 LVNE--VSYDNKLETGSITFNLDSSAP-TSSKDECHHNLDSEPLGTGSTPK--------- 392

Query: 401 DSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTST 460
                 +V+  + IS+      GESSFSA   +  L++YSGP+AYSGS+SLRS+SSTTST
Sbjct: 393 -----LEVAADQSISNNLQQGIGESSFSAAGLVTGLISYSGPVAYSGSLSLRSDSSTTST 452

Query: 461 RSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 501
           RSFAFPILQSEWN SPV+M KA+RRHYRK++GWR GLLCCRF
Sbjct: 453 RSFAFPILQSEWNCSPVRMAKADRRHYRKHKGWRHGLLCCRF 470

[Close]

BLAST of Cp4.1LG07g01010 vs. TAIR10
Match: AT2G03810.1 (AT2G03810.1 18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 105.5 bits (262), Expect = 9.5e-23
Identity = 114/384 (29.69%), Postives = 175/384 (45.57%), Query Frame = 1


Query: 160 DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVN 219
           D +   +A + S  KK    Y+DK+V  C + +++VC KE   + VKDIC+DEGVP    
Sbjct: 70  DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129

Query: 220 FIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHND-- 279
           F+F   D   S  T  L + +   K   N SE   +     K+  +  F  D  T  D  
Sbjct: 130 FLFGEKDSVKSSSTEDLMKAD---KTNVNPSETKSAEDSISKVD-DSEFCNDHKTDRDVE 189

Query: 280 ---AKDLNQIEEAKLNQSEPQVPVQKLISSEKGNSEDPASAFKPVESCNDNSALGTEAES 339
               +D    E    N ++  + V + + +   +   P S  +P E+  D  A+  + +S
Sbjct: 190 ESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSP-SEIEPDENSKDEVAISQDNDS 249

Query: 340 PNENIPTQHPSAHNNEFEKGSTTLNLNSISPMANAEEELHGNINSDYPGPKTSSAGTQEC 399
             E +      +  +E      +LN ++IS  ++ EE+    +         ++A   E 
Sbjct: 250 -KECLTLGDILSREDE----QKSLNQDNISSDSH-EEQSPSQLQDKEKRSLETTAIETEL 309

Query: 400 YGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPL----------------------- 459
             + +   G +  +S  +S+ T+ +  ++      P                        
Sbjct: 310 EKTEEPKQGEEKLSS--VSTTTSQEPNKTCNEPEKPETENHHQQNCLVENSYEDDKFSSS 369

Query: 460 ---------ASLVTYS------GPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVK 501
                    A  V+ S      GPIAYSGS+S+RS++STTS RSFAFPILQSEWNSSPV+
Sbjct: 370 RFGETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPILQSEWNSSPVR 429

[Close]

BLAST of Cp4.1LG07g01010 vs. TAIR10
Match: AT1G13650.2 (AT1G13650.2 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4))

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-08
Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 1


Query: 397 SNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTT 456
           + +S        + L+     +  GE SF         +TY GP++ S ++S+RS+   T
Sbjct: 102 TEESEADNSCDDNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDG--T 161

Query: 457 STRSFAFPILQSEWNSSPVKMVKAERRHYR 487
           S  SFA PILQSEWNSSPV+M KAE    R
Sbjct: 162 SASSFALPILQSEWNSSPVRMGKAEETQLR 189

[Close]

BLAST of Cp4.1LG07g01010 vs. NCBI nr
Match: gi|659089264|ref|XP_008445414.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 1.3e-138
Identity = 288/446 (64.57%), Postives = 327/446 (73.32%), Query Frame = 1


Query: 82  ESDPPFYSSMTSSDCVPESIECNYN-TELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTG 141
           ESD  FY+SMTS +  PES+ECNY+ T LQH+++S +P  L CQEKIN E+ IQS  S+ 
Sbjct: 4   ESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSC 63

Query: 142 GGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEI 201
            GN C+ TKIN SS D FD+NAEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+EI
Sbjct: 64  DGNICMITKINRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEI 123

Query: 202 NVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIAD 261
           NVNDVKDICIDEGV SL NF F+ST EKS  K  PL +  NEGSIKE++ S EV + IAD
Sbjct: 124 NVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIAD 183

Query: 262 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKL----------------I 321
           + K+SLEDHFA DW+THNDAKDL QIEE KLN SEP+V +QKL                I
Sbjct: 184 DHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQI 243

Query: 322 SSEKGNSEDPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNS 381
           S EK N EDP+SA K V+SCND  ALG+ AE P+ NI   HPS +N+EFE GS  L LNS
Sbjct: 244 SGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAA-HPSGYNDEFENGSIALTLNS 303

Query: 382 ISPMANAEEELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVST--------SRLISS 441
           ISP+AN  EE                   QEC G +DS  GTQVST        SRL+SS
Sbjct: 304 ISPVANGGEE------------------HQECCGRSDSVIGTQVSTNLEYRTSDSRLLSS 363

Query: 442 QTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSP 501
           Q  +D GESSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQ+EWNSSP
Sbjct: 364 QNMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSP 423

[Close]

BLAST of Cp4.1LG07g01010 vs. NCBI nr
Match: gi|449452821|ref|XP_004144157.1| (PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 5.4e-137
Identity = 284/447 (63.53%), Postives = 327/447 (73.15%), Query Frame = 1


Query: 82  ESDPPFYSSMTSSDCVPESIECNYN-TELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTG 141
           +SD  FY SMTS +  PES+ECNY+ T LQH++++ +P GL  Q+KIN E+ +QS  S+ 
Sbjct: 4   DSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSC 63

Query: 142 GGNSCLTTKINHSSVDCFDDN-AEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKE 201
            GNSC+ TKIN SS D FDDN AEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+E
Sbjct: 64  DGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQE 123

Query: 202 INVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIA 261
           +NVNDVKDICID+GV SL NF F+ST EKS  K  PL +  NEGSIKE++ SSEV + IA
Sbjct: 124 VNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIA 183

Query: 262 DNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKL---------------- 321
           D++K+SLEDHFA DW+THNDAKDL QIEE KLN SEP++ +QKL                
Sbjct: 184 DDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQ 243

Query: 322 ISSEKGNSEDPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLN 381
           IS EK N EDP+SA K V+SCND  AL + AE P +NIP  HPS +N+EFE GS  L  N
Sbjct: 244 ISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPA-HPSGYNDEFENGSIALTFN 303

Query: 382 SISPMANAEEELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVST--------SRLIS 441
           SISP+AN  EE                   QEC G +DS  GTQV T        SRL+S
Sbjct: 304 SISPVANGGEE------------------RQECCGRSDSVIGTQVLTNLEYRTSDSRLLS 363

Query: 442 SQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSS 501
           SQ  HD GESSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQSEWNSS
Sbjct: 364 SQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSS 423

[Close]

BLAST of Cp4.1LG07g01010 vs. NCBI nr
Match: gi|659089276|ref|XP_008445421.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo])

HSP 1 Score: 490.3 bits (1261), Expect = 3.9e-135
Identity = 282/437 (64.53%), Postives = 320/437 (73.23%), Query Frame = 1


Query: 91  MTSSDCVPESIECNYN-TELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTGGGNSCLTTK 150
           MTS +  PES+ECNY+ T LQH+++S +P  L CQEKIN E+ IQS  S+  GN C+ TK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 151 INHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDIC 210
           IN SS D FD+NAEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+EINVNDVKDIC
Sbjct: 61  INRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDIC 120

Query: 211 IDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIADNKKISLEDH 270
           IDEGV SL NF F+ST EKS  K  PL +  NEGSIKE++ S EV + IAD+ K+SLEDH
Sbjct: 121 IDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIADDHKVSLEDH 180

Query: 271 FATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKL----------------ISSEKGNSED 330
           FA DW+THNDAKDL QIEE KLN SEP+V +QKL                IS EK N ED
Sbjct: 181 FAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQISGEKANLED 240

Query: 331 PASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNSISPMANAEE 390
           P+SA K V+SCND  ALG+ AE P+ NI   HPS +N+EFE GS  L LNSISP+AN  E
Sbjct: 241 PSSASKSVDSCNDTPALGSAAEPPSHNIAA-HPSGYNDEFENGSIALTLNSISPVANGGE 300

Query: 391 ELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVST--------SRLISSQTAHDSGES 450
           E                   QEC G +DS  GTQVST        SRL+SSQ  +D GES
Sbjct: 301 E------------------HQECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDIGES 360

Query: 451 SFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERR 501
           SFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQ+EWNSSPVKMVKAERR
Sbjct: 361 SFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSPVKMVKAERR 418

[Close]

BLAST of Cp4.1LG07g01010 vs. NCBI nr
Match: gi|700192470|gb|KGN47674.1| (hypothetical protein Csa_6G370190 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 4.3e-134
Identity = 279/438 (63.70%), Postives = 321/438 (73.29%), Query Frame = 1


Query: 91  MTSSDCVPESIECNYN-TELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTGGGNSCLTTK 150
           MTS +  PES+ECNY+ T LQH++++ +P GL  Q+KIN E+ +QS  S+  GNSC+ TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 151 INHSSVDCFDDN-AEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDI 210
           IN SS D FDDN AEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 211 CIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIADNKKISLED 270
           CID+GV SL NF F+ST EKS  K  PL +  NEGSIKE++ SSEV + IAD++K+SLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 271 HFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKL----------------ISSEKGNSE 330
           HFA DW+THNDAKDL QIEE KLN SEP++ +QKL                IS EK N E
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 331 DPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNSISPMANAE 390
           DP+SA K V+SCND  AL + AE P +NIP  HPS +N+EFE GS  L  NSISP+AN  
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPA-HPSGYNDEFENGSIALTFNSISPVANGG 300

Query: 391 EELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVST--------SRLISSQTAHDSGE 450
           EE                   QEC G +DS  GTQV T        SRL+SSQ  HD GE
Sbjct: 301 EE------------------RQECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGE 360

Query: 451 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 501
           SSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 361 SSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 419

[Close]

BLAST of Cp4.1LG07g01010 vs. NCBI nr
Match: gi|719967157|ref|XP_010261008.1| (PREDICTED: uncharacterized protein LOC104599949 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 161.0 bits (406), Expect = 5.4e-36
Identity = 130/348 (37.36%), Postives = 179/348 (51.44%), Query Frame = 1


Query: 174 KKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRS--TDEKSSY 233
           +K +  Y DK VMEC++  + V  KE     VKDICIDEGVPSL   +  +   D KS +
Sbjct: 131 EKVTGFYTDKVVMECELPDLTVGFKEDPYRVVKDICIDEGVPSLDKILTENDEVDYKSCF 190

Query: 234 KTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQ 293
               L+ N    KE+ +   VL S+ + K + +E +   D     +++ L+Q +E    +
Sbjct: 191 PHTGLDVNSDLTKEKDS---VLPSLNEMKSL-VESYCNKDILNQCNSEVLHQKDEYVDEE 250

Query: 294 SEP-----------QVPVQKLISSEKGNSEDPASAFKPVESCNDNSALGTEAE-----SP 353
            +             VP+ KL + +         + K  +  N +S+    AE     SP
Sbjct: 251 DKTAHNSTDEVIPGSVPLGKLDTEDSYIKPSNFGSNKDQQQSNQDSSKEAPAEKYGISSP 310

Query: 354 NENIPTQHPS---AHNNEFEKGSTTLNLNSISPMANAEEELHGNINSDYPGPKTSSAGTQ 413
            E     +P+     NN+ E GST ++ +   P    E     +  +D P P        
Sbjct: 311 TEESDDSNPANKVPFNNKVENGSTIMSFHPSKPTTREET----STKADSPQPLHILLSMS 370

Query: 414 ECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSE 473
                 D    +   +SR +  Q  H  GESSFSA  P++  +TYSGP+ YSGSISLRS+
Sbjct: 371 RL---EDGTVDSLTGSSRSLCIQHGH--GESSFSAAGPMSGSITYSGPVPYSGSISLRSD 430

Query: 474 SSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 501
           SSTTSTRSFAFPIL SEWNSSPVKM KA RR++ K+RGWR  LLCCRF
Sbjct: 431 SSTTSTRSFAFPILHSEWNSSPVKMAKANRRNFHKHRGWRMNLLCCRF 465

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g01010 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g01010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFP8_CUCSA	3.0e-134	63.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1	[more]
A0A022QJK2_ERYGU	1.2e-34	33.41	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006975mg PE=4 SV=1	[more]
A0A068TX06_COFCA	3.3e-32	32.67	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032430001 PE=4 SV=1	[more]
A0A061E9F2_THECC	7.3e-32	41.89	18S pre-ribosomal assembly protein gar2-related, putative isoform 1 OS=Theobroma...	[more]
A0A061EGZ8_THECC	7.3e-32	41.89	18S pre-ribosomal assembly protein gar2-related, putative isoform 2 OS=Theobroma...	[more]

BLAST of Cp4.1LG07g01010 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03810.1	9.5e-23	29.69	18S pre-ribosomal assembly protein gar2-related	[more]
AT1G13650.2	2.3e-08	40.00	BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assemb...	[more]

BLAST of Cp4.1LG07g01010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089264\|ref\|XP_008445414.1\|	1.3e-138	64.57	PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo]	[more]
gi\|449452821\|ref\|XP_004144157.1\|	5.4e-137	63.53	PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus]	[more]
gi\|659089276\|ref\|XP_008445421.1\|	3.9e-135	64.53	PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo]	[more]
gi\|700192470\|gb\|KGN47674.1\|	4.3e-134	63.70	hypothetical protein Csa_6G370190 [Cucumis sativus]	[more]
gi\|719967157\|ref\|XP_010261008.1\|	5.4e-36	37.36	PREDICTED: uncharacterized protein LOC104599949 isoform X1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g01010.1	Cp4.1LG07g01010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 41..61 scor
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 165..500 score: 1.5
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 165..500 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g01010	Cucsa.328050	Cucumber (Gy14) v1	cgycpeB0866
Cp4.1LG07g01010	CmaCh12G001140	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g01010	CmaCh05G004590	Cucurbita maxima (Rimu)	cmacpeB791
Cp4.1LG07g01010	CmoCh05G004840	Cucurbita moschata (Rifu)	cmocpeB744
Cp4.1LG07g01010	CmoCh12G000950	Cucurbita moschata (Rifu)	cmocpeB174
Cp4.1LG07g01010	Cla022044	Watermelon (97103) v1	cpewmB783
Cp4.1LG07g01010	MELO3C011401	Melon (DHL92) v3.5.1	cpemeB755
Cp4.1LG07g01010	ClCG08G010610	Watermelon (Charleston Gray)	cpewcgB749
Cp4.1LG07g01010	CSPI06G19880	Wild cucumber (PI 183967)	cpecpiB839
Cp4.1LG07g01010	Lsi08G009150	Bottle gourd (USVL1VR-Ls)	cpelsiB686
Cp4.1LG07g01010	MELO3C011401.2	Melon (DHL92) v3.6.1	cpemedB891
Cp4.1LG07g01010	CsaV3_6G033910	Cucumber (Chinese Long) v3	cpecucB1031
Cp4.1LG07g01010	Bhi04G000938	Wax gourd	cpewgoB1033
Cp4.1LG07g01010	CsGy6G019410	Cucumber (Gy14) v2	cgybcpeB875
Cp4.1LG07g01010	Carg20572	Silver-seed gourd	carcpeB0925
Cp4.1LG07g01010	Carg09252	Silver-seed gourd	carcpeB0207

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g01010	Cp4.1LG11g04010	Cucurbita pepo (Zucchini)	cpecpeB138

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g01010	Wax gourd	cpewgoB1049
Cp4.1LG07g01010	Cucumber (Chinese Long) v2	cpecuB837