CmoCh05G004840 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G004840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description18S pre-ribosomal assembly protein gar2
LocationCmo_Chr05 : 2274474 .. 2276436 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCTGCAGAAAGTGTTCTTCATTTACCATTCAATGACTAGCCCAAATTGTGTTCCAGAATCTCTCGAATGCAATTACAGTAAGTTGCAACACCGGGTCATGAGTATCAATCCAATTGGTCTCTCATGTCAAGAGAGGATAAACCAGGAGGATTCATCTCAATCTTCATATTTCTCTAGTGATGGGAATAGTTGCATGACTACAAAGATTAATGGCTCGTCTGTGGGTTGTTCTGTGGATAATGCTGATGGCATTAGTGCATTTGCTGCACCATCCAATATGAAACCCTTATTCTCATATGTGGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTATGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATTGATGAAGGGGTGACTTCTTTGGACAATTACTTCTTTAGGAGTAAGGACGAGAAGTCGATCTGCAAAATCGTGCCTCTGGAGAAAGATCAAACCGAAGGATCTGTAAAAGAACAAGAGAATTCTTCTGAGATGTCCAAATCCATAGCAGATGATCGAAAGGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGAAACAAAATTCAATCCGAGTGAGCCAAAAGTTTCGATGCATATTTCTAGCCAAAAGCTAGTTAAGAAAGGTTACTCTTCCGAGTCTTTCGACAACATGGGTGTCCAGGTATGCATATTTCTAGCCAAGTTACTAATCATGTCCTTTTGCACTTCTTGTTTGTTGTATTTTTAGTCTGCATATGTTGAAGATTGCTTTGAATTATAACTAATGCGATAAATAGTGGAATTCAAATGGGTACTTTCAGTACAATGGCGAAACAATTTTAGCTCTAGTGGCTCAAAACTTCTCATGTTTGATGCTTCTTAGACTTGGTTGATGTAGATTGAATTTCATTTGATTGCAGATATCTGGTGAAAAAGAAAAGTCGGATGATCCCGATTCGGCTTCCAAGTCTGTTGAATCTTGCAATAGCAATTCTGCTCTGCGTTCTACAGCAGAACCACCAAAAGATGTCAACCGAACACATCAGTCAGCTTATAACAATGAATCTGAGAATGGAAGTATTGCATTTAATTTCAATTCGATCTGTTCTGTGGCCAATGGTGTAGAAGAACATCATGGAAATACCAACTTAAACTATCCTGCACCCATAACCAGCAGTGCAGGGACACAGGAGTGGCGTGGAAGCGATTCGGGAACACAAGTTTCAACCAATCTGGAATGTAGAACATCAGATAGTCGACTAGTTTCAAGTCAGTCCACATACGACATAGGCGAGTCTAGTTTCTCTGCTGCAGATCCATTAGCTAGTCTTATTACTTACTCGGGGCCTGGAAGCGTCTCTCTTCGATCGGAAAGTAGCACAACAAGCACACATTCTTTTGCCTTTCCCATGTTAGTCCCAATCTAACTTCACCTCTCAAGCTTCTTCCTTCCCTATCCCTTTCTAAATTGTAATCTAAGGTAAATTATATGTCTTCTCTGGTTTTATAGATTACAGTCTGAATGGAATAGTAGCCCAGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTTTGATTGGTTCGTTGCTATCTCTCGAGTAAGATTCTGTTTGTGCATCATCCAAATTTATTTCCACACACATGTAAGTAGATGTATTGTTTACTGGAGGCTGTGCACTTCATTCATAGTTATTCTTTACAGTTTGGCCTATTATGTGAAATTTAAGGTATTAGTATACCTTATCTCTCTCTCTCTGAAAAATTCACCAGTCGGCCATGTTTCTCCTATGCTTGTAAACCATGGTTCTTTCTTGTTACCAATCACTTATTTGTAGGGCTCTTTGATTTATACAAGGATGGTATGACATGGTTGGCCATGAAAATTGAT

mRNA sequence

ATGTATCTGCAGAAAGTGTTCTTCATTTACCATTCAATGACTAGCCCAAATTGTGTTCCAGAATCTCTCGAATGCAATTACAGTAAGTTGCAACACCGGGTCATGAGTATCAATCCAATTGGTCTCTCATGTCAAGAGAGGATAAACCAGGAGGATTCATCTCAATCTTCATATTTCTCTAGTGATGGGAATAGTTGCATGACTACAAAGATTAATGGCTCGTCTGTGGGTTGTTCTGTGGATAATGCTGATGGCATTAGTGCATTTGCTGCACCATCCAATATGAAACCCTTATTCTCATATGTGGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTATGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATTGATGAAGGGGTGACTTCTTTGGACAATTACTTCTTTAGGAGTAAGGACGAGAAGTCGATCTGCAAAATCGTGCCTCTGGAGAAAGATCAAACCGAAGGATCTGTAAAAGAACAAGAGAATTCTTCTGAGATGTCCAAATCCATAGCAGATGATCGAAAGGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGAAACAAAATTCAATCCGAGTGAGCCAAAAGTTTCGATGCATATTTCTAGCCAAAAGCTAGTTAAGAAAGGTTACTCTTCCGAGTCTTTCGACAACATGGGTGTCCAGTGGAATTCAAATGGGTACTTTCAGTACAATGGCGAAACAATTTTAGCTCTAATATCTGGTGAAAAAGAAAAGTCGGATGATCCCGATTCGGCTTCCAAGTCTGTTGAATCTTGCAATAGCAATTCTGCTCTGCGTTCTACAGCAGAACCACCAAAAGATGTCAACCGAACACATCAGTCAGCTTATAACAATGAATCTGAGAATGGAAGTATTGCATTTAATTTCAATTCGATCTGTTCTGTGGCCAATGGTGTAGAAGAACATCATGGAAATACCAACTTAAACTATCCTGCACCCATAACCAGCAGTGCAGGGACACAGGAGTGGCGTGGAAGCGATTCGGGAACACAAGTTTCAACCAATCTGGAATGTAGAACATCAGATAGTCGACTAGTTTCAAGTCAGTCCACATACGACATAGGCGAGTCTAGTTTCTCTGCTGCAGATCCATTAGCTAGTCTTATTACTTACTCGGGGCCTGGAAGCGTCTCTCTTCGATCGGAAAGTAGCACAACAAGCACACATTCTTTTGCCTTTCCCATATTACAGTCTGAATGGAATAGTAGCCCAGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTTTGATTGGTTCGTTGCTATCTCTCGAGTAAGATTCTGTTTGTGCATCATCCAAATTTATTTCCACACACATGTAAGTAGATGTATTGTTTACTGGAGGCTGTGCACTTCATTCATAGTTATTCTTTACAGTTTGGCCTATTATGTGAAATTTAAGGTATTAGTATACCTTATCTCTCTCTCTCTGAAAAATTCACCAGTCGGCCATGTTTCTCCTATGCTTGTAAACCATGGTTCTTTCTTGTTACCAATCACTTATTTGTAGGGCTCTTTGATTTATACAAGGATGGTATGACATGGTTGGCCATGAAAATTGAT

Coding sequence (CDS)

ATGTATCTGCAGAAAGTGTTCTTCATTTACCATTCAATGACTAGCCCAAATTGTGTTCCAGAATCTCTCGAATGCAATTACAGTAAGTTGCAACACCGGGTCATGAGTATCAATCCAATTGGTCTCTCATGTCAAGAGAGGATAAACCAGGAGGATTCATCTCAATCTTCATATTTCTCTAGTGATGGGAATAGTTGCATGACTACAAAGATTAATGGCTCGTCTGTGGGTTGTTCTGTGGATAATGCTGATGGCATTAGTGCATTTGCTGCACCATCCAATATGAAACCCTTATTCTCATATGTGGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTATGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATTGATGAAGGGGTGACTTCTTTGGACAATTACTTCTTTAGGAGTAAGGACGAGAAGTCGATCTGCAAAATCGTGCCTCTGGAGAAAGATCAAACCGAAGGATCTGTAAAAGAACAAGAGAATTCTTCTGAGATGTCCAAATCCATAGCAGATGATCGAAAGGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTACTCATAATGATGCGAAGGAAACAAAATTCAATCCGAGTGAGCCAAAAGTTTCGATGCATATTTCTAGCCAAAAGCTAGTTAAGAAAGGTTACTCTTCCGAGTCTTTCGACAACATGGGTGTCCAGTGGAATTCAAATGGGTACTTTCAGTACAATGGCGAAACAATTTTAGCTCTAATATCTGGTGAAAAAGAAAAGTCGGATGATCCCGATTCGGCTTCCAAGTCTGTTGAATCTTGCAATAGCAATTCTGCTCTGCGTTCTACAGCAGAACCACCAAAAGATGTCAACCGAACACATCAGTCAGCTTATAACAATGAATCTGAGAATGGAAGTATTGCATTTAATTTCAATTCGATCTGTTCTGTGGCCAATGGTGTAGAAGAACATCATGGAAATACCAACTTAAACTATCCTGCACCCATAACCAGCAGTGCAGGGACACAGGAGTGGCGTGGAAGCGATTCGGGAACACAAGTTTCAACCAATCTGGAATGTAGAACATCAGATAGTCGACTAGTTTCAAGTCAGTCCACATACGACATAGGCGAGTCTAGTTTCTCTGCTGCAGATCCATTAGCTAGTCTTATTACTTACTCGGGGCCTGGAAGCGTCTCTCTTCGATCGGAAAGTAGCACAACAAGCACACATTCTTTTGCCTTTCCCATATTACAGTCTGAATGGAATAGTAGCCCAGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTTTGA
Homology
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BLAST of CmoCh05G004840 vs. TrEMBL
Match: A0A0A0KFP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 4.9e-144
Identity = 307/458 (67.03%), Postives = 338/458 (73.80%), Query Frame = 1 

Query: 13  MTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTK 72
           MTSPN  PESLECNYS   LQHRVM+ NP GLS Q++INQE+  QSS+ S DGNSCM TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INGSSVGCSVDN-ADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDI 132
           IN SS     DN A+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIADDRKVSLED 192
           CID+GV SL+N+FF+S  EKSI KI PLE+D+ EGS+KE+E SSE+SK IADDRKVSLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNG 252
           HFAMDWTTHNDAK      E K N SEP++ M    QKLVK+ YSSES D +G+Q     
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLM----QKLVKRSYSSESLDKIGLQ----- 240

Query: 253 YFQYNGETILALISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNE 312
                       ISGEK   +DP SASKSV+SCN   AL S AEPPKD    H S YN+E
Sbjct: 241 ------------ISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDE 300

Query: 313 SENGSIAFNFNSICSVANGVEEHHGNTNLNYPAPITSSAGTQEWRG-SDS--GTQVSTNL 372
            ENGSIA  FNSI  VANG EE                   QE  G SDS  GTQV TNL
Sbjct: 301 FENGSIALTFNSISPVANGGEER------------------QECCGRSDSVIGTQVLTNL 360

Query: 373 ECRTSDSRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTHSFA 432
           E RTSDSRL+SSQ+ +DIGESSFSA DPLASL+TYSGP    GS+SLRSESSTTST SFA
Sbjct: 361 EYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFA 419

Query: 433 FPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 455
           FPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 FPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 419

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BLAST of CmoCh05G004840 vs. TrEMBL
Match: B9RLG9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466920 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 142/397 (35.77%), Postives = 203/397 (51.13%), Query Frame = 1 

Query: 101 YVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFF-RSKDEKSICKIVPLEK 160
           Y+DK+VME ++ + ++  KE   + VKDIC+DEGV S +N+ F  S D++ +C  +  EK
Sbjct: 113 YIDKNVMEPELPELVLCYKENTYHVVKDICVDEGVPSQENFLFDTSVDQEKLCPYLIPEK 172

Query: 161 DQTEGSVKEQ-------ENSSEMSKSIADDRKVSLE----DHFAMDWTTHNDAKETKFNP 220
           D      KE+       +  S+   S   D K S+     +  AM+   +  +KET F+ 
Sbjct: 173 DIKSEIQKERVDLDMSTQYLSKNDNSFKCDSKESMAIAEIEDDAMEEIANYTSKET-FSL 232

Query: 221 SE----PKVSMHISSQKLVKKGYSSESFDNMGVQWNSNGYF----------QYNGETILA 280
            E    P+V   +S  K +    S++  + + +Q  S              +Y  E  L 
Sbjct: 233 GELLLMPEVVAELSHSKSLLN--STDEAEQLSIQRPSENIVLATASACEESKYATEQFLL 292

Query: 281 LISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTH--QSAYNNESENGSIAFN 340
           +        ++       + +  S+S+ +++     +V       S    E ENG+ A  
Sbjct: 293 VTPAVDPLVEESGHEEAKLGTLTSDSSPKASDHGHDEVILASLAPSYATEEPENGAKAAK 352

Query: 341 FNS--ICSVANGVEEHHGNTNLNYPAPITSSAGTQEWRGSDSGTQV--STNLECR----- 400
             S  + SV++          LN  AP  S        G + G+QV  S +LE R     
Sbjct: 353 SPSHTLDSVSD----------LNSSAPTAS--------GGEEGSQVGGSEHLESRNSSRH 412

Query: 401 --TSDSRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTHSFAF 455
             TS +   S Q  Y  GESSFSAA PL+ LI+YSGP    GS+SLRS+SSTTST SFAF
Sbjct: 413 EDTSITEPFSGQLQYSHGESSFSAAGPLSGLISYSGPIAYSGSLSLRSDSSTTSTRSFAF 472

[Close]
BLAST of CmoCh05G004840 vs. TrEMBL
Match: A0A0D2PTD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.3e-31
Identity = 148/467 (31.69%), Postives = 213/467 (45.61%), Query Frame = 1 

Query: 49  NQEDSSQSSYFSSDGNSCMTTKINGSSVGCSVDNADGISA--FAAPSN--MKPLFS---- 108
           N  D+    Y    G+    +K++ S       N +   A  F  P++  +K + S    
Sbjct: 63  NDGDTDPMLYLEKTGDGWPASKLDCSMSVNDFSNGNEKEARDFVPPNSHSLKNMGSFQDS 122

Query: 109 --YVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFFRS-KDEKSICKIVPL 168
             Y+DKSVME  + + +V  KE   + VKDICIDEGV + D + F S  D+KS C  +P 
Sbjct: 123 VFYLDKSVMEYALPELVVCYKESAYHVVKDICIDEGVPTQDKFLFDSVVDKKSDCNFLPS 182

Query: 169 EKDQTEGSVKEQENS-------------SEMSKSIADDR---KVSLEDHFAMDWTTHNDA 228
           E+DQ    +KE+  S             ++M K I ++R   K ++ D    D +   + 
Sbjct: 183 EEDQDSKLLKEKSESDISMQAGSMYPEENQMDKDIDNERDSNKKTISDKCTQDISLSLEE 242

Query: 229 KETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNGYFQYNGETILALISGEKE 288
            E K      ++     ++ L+     ++    M     S   F       +  +S  K 
Sbjct: 243 NEPK-----NRIPSQCDTEDLILSRKMTDDTMKMARDDVSKELFTLGELLSMPELSTVKP 302

Query: 289 KSDDPDSASKSV-ESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSICSVA 348
           K+   +  S  + + C  NS  +     P  V+       + ES+N S     ++   V+
Sbjct: 303 KAMSSNCKSDGIKQQCFQNSKEKEVMVMPPLVSA------DKESDNSSKETILSASAPVS 362

Query: 349 NGVEEHHGNTNLNYPAPITSSAGTQEWR------------GSDSGTQVSTNLE-CRTSDS 408
              E           +P+TSS+   E              G DS    S+  E C   D 
Sbjct: 363 VAEEMDSRKEEATMFSPVTSSSLVNEVSDDSKLAARSIAFGFDSSALTSSKNEGCHNLDR 422

Query: 409 RLVSSQSTYDI----------------GESSFSAADPLASLITYSGP----GSVSLRSES 455
             + +  T  +                GESSFSAA  +  LI+YSGP    GS+S RS+S
Sbjct: 423 EALETGHTPKLEDIADQPSSNNLQCGNGESSFSAAGLVTGLISYSGPIAYSGSLSHRSDS 482

[Close]
BLAST of CmoCh05G004840 vs. TrEMBL
Match: A0A0D2ND06_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.3e-31
Identity = 148/467 (31.69%), Postives = 213/467 (45.61%), Query Frame = 1 

Query: 49  NQEDSSQSSYFSSDGNSCMTTKINGSSVGCSVDNADGISA--FAAPSN--MKPLFS---- 108
           N  D+    Y    G+    +K++ S       N +   A  F  P++  +K + S    
Sbjct: 11  NDGDTDPMLYLEKTGDGWPASKLDCSMSVNDFSNGNEKEARDFVPPNSHSLKNMGSFQDS 70

Query: 109 --YVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFFRS-KDEKSICKIVPL 168
             Y+DKSVME  + + +V  KE   + VKDICIDEGV + D + F S  D+KS C  +P 
Sbjct: 71  VFYLDKSVMEYALPELVVCYKESAYHVVKDICIDEGVPTQDKFLFDSVVDKKSDCNFLPS 130

Query: 169 EKDQTEGSVKEQENS-------------SEMSKSIADDR---KVSLEDHFAMDWTTHNDA 228
           E+DQ    +KE+  S             ++M K I ++R   K ++ D    D +   + 
Sbjct: 131 EEDQDSKLLKEKSESDISMQAGSMYPEENQMDKDIDNERDSNKKTISDKCTQDISLSLEE 190

Query: 229 KETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNGYFQYNGETILALISGEKE 288
            E K      ++     ++ L+     ++    M     S   F       +  +S  K 
Sbjct: 191 NEPK-----NRIPSQCDTEDLILSRKMTDDTMKMARDDVSKELFTLGELLSMPELSTVKP 250

Query: 289 KSDDPDSASKSV-ESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSICSVA 348
           K+   +  S  + + C  NS  +     P  V+       + ES+N S     ++   V+
Sbjct: 251 KAMSSNCKSDGIKQQCFQNSKEKEVMVMPPLVSA------DKESDNSSKETILSASAPVS 310

Query: 349 NGVEEHHGNTNLNYPAPITSSAGTQEWR------------GSDSGTQVSTNLE-CRTSDS 408
              E           +P+TSS+   E              G DS    S+  E C   D 
Sbjct: 311 VAEEMDSRKEEATMFSPVTSSSLVNEVSDDSKLAARSIAFGFDSSALTSSKNEGCHNLDR 370

Query: 409 RLVSSQSTYDI----------------GESSFSAADPLASLITYSGP----GSVSLRSES 455
             + +  T  +                GESSFSAA  +  LI+YSGP    GS+S RS+S
Sbjct: 371 EALETGHTPKLEDIADQPSSNNLQCGNGESSFSAAGLVTGLISYSGPIAYSGSLSHRSDS 430

[Close]
BLAST of CmoCh05G004840 vs. TrEMBL
Match: A0A0B0P7Y4_GOSAR (Formate--tetrahydrofolate ligase OS=Gossypium arboreum GN=F383_07128 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.3e-31
Identity = 133/397 (33.50%), Postives = 193/397 (48.61%), Query Frame = 1 

Query: 101 YVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFFRSK-DEKSICKIVPLEK 160
           Y+DKSVM+C++ + +V  KE   + VKDICIDEGV + D + F S  DEKS C     +K
Sbjct: 126 YLDKSVMDCELPELVVCYKESTYHVVKDICIDEGVPTQDMFLFESSVDEKSECNFSYPKK 185

Query: 161 DQTEGSVKE---------------QENSS--EMSKSIADDRKVSLEDHFAMDWTTHNDAK 220
           DQ    +KE               +EN S  ++      ++K++ + +      +  + K
Sbjct: 186 DQDNELMKEMSETDIPMQNISFSPEENQSGKDIDNDCGSNKKLNADTYMQDIALSLEENK 245

Query: 221 ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNGYFQYNGETILALISGEKEK 280
             K  P+E      + ++ +  K  ++E   N G    S   F          ++  K +
Sbjct: 246 SNKGIPNEWDPRDLLVTRDM--KDDATEMMSNEG----SKELFILGDILSFPELTTLKSE 305

Query: 281 SDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSIAFNFNSICSVANG 340
           +  PD  S   E  +  ++ +       +V            ++ ++  +  ++ S A G
Sbjct: 306 AMSPDFKSDRNEQQSFENSSKKEVIVASEVE-----------DSNNLILSAPALASTAEG 365

Query: 341 VEEHHGNTNLNYPAPITSS-----AGTQEWRGS----------DSGTQVSTNLEC-RTSD 400
            +   G      PAP ++S     +G     GS           SG   S  LE  RTS 
Sbjct: 366 SDSGKGEATPISPAPASASLEATSSGLVNETGSITFDSRSSAPTSGKGSSEPLETGRTSK 425

Query: 401 -----SRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTHSFAF 455
                 +  SS      GESSFSAA PL  LI+YSGP    G++SLRS+SSTTST SFAF
Sbjct: 426 LEETADQPFSSNLQSGNGESSFSAAGPLTGLISYSGPITYSGNLSLRSDSSTTSTRSFAF 485

[Close]
BLAST of CmoCh05G004840 vs. TAIR10
Match: AT2G03810.1 (AT2G03810.1 18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-24
Identity = 115/382 (30.10%), Postives = 173/382 (45.29%), Query Frame = 1 

Query: 91  APSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDICIDEGVTSLDNYFFRSKDEKS 150
           +P    P+F Y+DK+V  C + + +V  KE   + VKDIC+DEGV   + + F  KD   
Sbjct: 81  SPEKKDPVF-YMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLFGEKDSVK 140

Query: 151 ICKIVPLEKDQTEGSVKEQENSSEMSKSIADDRKVSLEDHFAMDWTTHNDAKETK---FN 210
                 L K         +  S+E S S  DD +      F  D  T  D +E+    F 
Sbjct: 141 SSSTEDLMKADKTNVNPSETKSAEDSISKVDDSE------FCNDHKTDRDVEESSGEDFA 200

Query: 211 PSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNGYFQYNGETILALISGEKEKSDDPD 270
            +E   S +     +V +   +                  +G +   +   E  K +   
Sbjct: 201 DAEGTSSNYNQEHLIVTEEVKASPT---------------HGLSPSEIEPDENSKDEVAI 260

Query: 271 SASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNESENGSI-------AFNFNSICSVA 330
           S     + C +   + S  +  K +N+ + S+ ++E ++ S        +    +I +  
Sbjct: 261 SQDNDSKECLTLGDILSREDEQKSLNQDNISSDSHEEQSPSQLQDKEKRSLETTAIETEL 320

Query: 331 NGVEE-HHGNTNLNYPAPITSSAGTQEWRGSDSG-TQVSTNLECRTSDSRLVSSQSTYDI 390
              EE   G   L+  +  TS    +     +   T+      C   +S      S+   
Sbjct: 321 EKTEEPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENHHQQNCLVENSYEDDKFSSSRF 380

Query: 391 GESSFSAADP--LASLITYSGP----GSVSLRSESSTTSTHSFAFPILQSEWNSSPVKMV 450
           GE+SFSAAD   ++  ITYSGP    GS+S+RS++STTS  SFAFPILQSEWNSSPV+M 
Sbjct: 381 GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPILQSEWNSSPVRMA 438

Query: 451 KAERRHYRKYRGWREGLLCCRF 455
           KA++R  R+  GWR  LLCCRF
Sbjct: 441 KADKR--RQKGGWRHTLLCCRF 438

[Close]
BLAST of CmoCh05G004840 vs. TAIR10
Match: AT1G13650.2 (AT1G13650.2 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4))

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08
Identity = 38/77 (49.35%), Postives = 42/77 (54.55%), Query Frame = 1 

Query: 366 DSRLVSSQSTYDIGESSFSAADPLASLITYSGP--GSVSLRSESSTTSTHSFAFPILQSE 425
           D+ L+        GE SF  A      ITY GP  GS +L   S  TS  SFA PILQSE
Sbjct: 113 DNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDGTSASSFALPILQSE 172

Query: 426 WNSSPVKMVKAERRHYR 441
           WNSSPV+M KAE    R
Sbjct: 173 WNSSPVRMGKAEETQLR 189

[Close]
BLAST of CmoCh05G004840 vs. NCBI nr
Match: gi|449452821|ref|XP_004144157.1| (PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 4.4e-146
Identity = 310/461 (67.25%), Postives = 341/461 (73.97%), Query Frame = 1 

Query: 10  YHSMTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCM 69
           YHSMTSPN  PESLECNYS   LQHRVM+ NP GLS Q++INQE+  QSS+ S DGNSCM
Sbjct: 10  YHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCM 69

Query: 70  TTKINGSSVGCSVDN-ADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDV 129
            TKIN SS     DN A+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+E+NVNDV
Sbjct: 70  ITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDV 129

Query: 130 KDICIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIADDRKVS 189
           KDICID+GV SL+N+FF+S  EKSI KI PLE+D+ EGS+KE+E SSE+SK IADDRKVS
Sbjct: 130 KDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVS 189

Query: 190 LEDHFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWN 249
           LEDHFAMDWTTHNDAK      E K N SEP++ M    QKLVK+ YSSES D +G+Q  
Sbjct: 190 LEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLM----QKLVKRSYSSESLDKIGLQ-- 249

Query: 250 SNGYFQYNGETILALISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAY 309
                          ISGEK   +DP SASKSV+SCN   AL S AEPPKD    H S Y
Sbjct: 250 ---------------ISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGY 309

Query: 310 NNESENGSIAFNFNSICSVANGVEEHHGNTNLNYPAPITSSAGTQEWRG-SDS--GTQVS 369
           N+E ENGSIA  FNSI  VANG EE                   QE  G SDS  GTQV 
Sbjct: 310 NDEFENGSIALTFNSISPVANGGEER------------------QECCGRSDSVIGTQVL 369

Query: 370 TNLECRTSDSRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTH 429
           TNLE RTSDSRL+SSQ+ +DIGESSFSA DPLASL+TYSGP    GS+SLRSESSTTST 
Sbjct: 370 TNLEYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTR 429

Query: 430 SFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 455
           SFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 430 SFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 431

[Close]
BLAST of CmoCh05G004840 vs. NCBI nr
Match: gi|700192470|gb|KGN47674.1| (hypothetical protein Csa_6G370190 [Cucumis sativus])

HSP 1 Score: 519.2 bits (1336), Expect = 7.1e-144
Identity = 307/458 (67.03%), Postives = 338/458 (73.80%), Query Frame = 1 

Query: 13  MTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTK 72
           MTSPN  PESLECNYS   LQHRVM+ NP GLS Q++INQE+  QSS+ S DGNSCM TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INGSSVGCSVDN-ADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDI 132
           IN SS     DN A+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIADDRKVSLED 192
           CID+GV SL+N+FF+S  EKSI KI PLE+D+ EGS+KE+E SSE+SK IADDRKVSLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNG 252
           HFAMDWTTHNDAK      E K N SEP++ M    QKLVK+ YSSES D +G+Q     
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLM----QKLVKRSYSSESLDKIGLQ----- 240

Query: 253 YFQYNGETILALISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNE 312
                       ISGEK   +DP SASKSV+SCN   AL S AEPPKD    H S YN+E
Sbjct: 241 ------------ISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDE 300

Query: 313 SENGSIAFNFNSICSVANGVEEHHGNTNLNYPAPITSSAGTQEWRG-SDS--GTQVSTNL 372
            ENGSIA  FNSI  VANG EE                   QE  G SDS  GTQV TNL
Sbjct: 301 FENGSIALTFNSISPVANGGEER------------------QECCGRSDSVIGTQVLTNL 360

Query: 373 ECRTSDSRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTHSFA 432
           E RTSDSRL+SSQ+ +DIGESSFSA DPLASL+TYSGP    GS+SLRSESSTTST SFA
Sbjct: 361 EYRTSDSRLLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFA 419

Query: 433 FPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 455
           FPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 FPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 419

[Close]
BLAST of CmoCh05G004840 vs. NCBI nr
Match: gi|659089264|ref|XP_008445414.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 1.6e-143
Identity = 310/469 (66.10%), Postives = 337/469 (71.86%), Query Frame = 1 

Query: 1   MYLQKVFFIYHSMTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSY 60
           M L+     Y+SMTS N  PESLECNYS   LQHRVMS NP  LSCQE+INQE+  QSS+
Sbjct: 1   MKLESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSH 60

Query: 61  FSSDGNSCMTTKINGSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYD 120
            S DGN CM TKIN SS     +NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D
Sbjct: 61  SSCDGNICMITKINRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCD 120

Query: 121 KEINVNDVKDICIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKS 180
           +EINVNDVKDICIDEGV SL+N+FF+S  EKSI KI PLE+D+ EGS+KE+E S E+SK 
Sbjct: 121 QEINVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKF 180

Query: 181 IADDRKVSLEDHFAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESF 240
           IADD KVSLEDHFAMDWTTHNDAK      E K N SEP+V M    QKLVKK  SSES 
Sbjct: 181 IADDHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLM----QKLVKKSCSSESL 240

Query: 241 DNMGVQWNSNGYFQYNGETILALISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDV 300
           D +GVQ                 ISGEK   +DP SASKSV+SCN   AL S AEPP   
Sbjct: 241 DKIGVQ-----------------ISGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHN 300

Query: 301 NRTHQSAYNNESENGSIAFNFNSICSVANGVEEHHGNTNLNYPAPITSSAGTQEWRG-SD 360
              H S YN+E ENGSIA   NSI  VANG EEH                  QE  G SD
Sbjct: 301 IAAHPSGYNDEFENGSIALTLNSISPVANGGEEH------------------QECCGRSD 360

Query: 361 S--GTQVSTNLECRTSDSRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRS 420
           S  GTQVSTNLE RTSDSRL+SSQ+  DIGESSFSA DPLASL+TYSGP    GS+SLRS
Sbjct: 361 SVIGTQVSTNLEYRTSDSRLLSSQNMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRS 420

Query: 421 ESSTTSTHSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 455
           ESSTTST SFAFPILQ+EWNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 ESSTTSTRSFAFPILQTEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 430

[Close]
BLAST of CmoCh05G004840 vs. NCBI nr
Match: gi|659089276|ref|XP_008445421.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo])

HSP 1 Score: 513.5 bits (1321), Expect = 3.9e-142
Identity = 306/457 (66.96%), Postives = 331/457 (72.43%), Query Frame = 1 

Query: 13  MTSPNCVPESLECNYSK--LQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMTTK 72
           MTS N  PESLECNYS   LQHRVMS NP  LSCQE+INQE+  QSS+ S DGN CM TK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 73  INGSSVGCSVDNADGISAFAAPSNMKPLFSYVDKSVMECQMSKTIVYDKEINVNDVKDIC 132
           IN SS     +NA+GISAF A SNMKP FSYVDKSVMECQMSKTIV D+EINVNDVKDIC
Sbjct: 61  INRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDIC 120

Query: 133 IDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIADDRKVSLEDH 192
           IDEGV SL+N+FF+S  EKSI KI PLE+D+ EGS+KE+E S E+SK IADD KVSLEDH
Sbjct: 121 IDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIADDHKVSLEDH 180

Query: 193 FAMDWTTHNDAK------ETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWNSNGY 252
           FAMDWTTHNDAK      E K N SEP+V M    QKLVKK  SSES D +GVQ      
Sbjct: 181 FAMDWTTHNDAKDLTQIEEEKLNLSEPEVLM----QKLVKKSCSSESLDKIGVQ------ 240

Query: 253 FQYNGETILALISGEKEKSDDPDSASKSVESCNSNSALRSTAEPPKDVNRTHQSAYNNES 312
                      ISGEK   +DP SASKSV+SCN   AL S AEPP      H S YN+E 
Sbjct: 241 -----------ISGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAAHPSGYNDEF 300

Query: 313 ENGSIAFNFNSICSVANGVEEHHGNTNLNYPAPITSSAGTQEWRG-SDS--GTQVSTNLE 372
           ENGSIA   NSI  VANG EEH                  QE  G SDS  GTQVSTNLE
Sbjct: 301 ENGSIALTLNSISPVANGGEEH------------------QECCGRSDSVIGTQVSTNLE 360

Query: 373 CRTSDSRLVSSQSTYDIGESSFSAADPLASLITYSGP----GSVSLRSESSTTSTHSFAF 432
            RTSDSRL+SSQ+  DIGESSFSA DPLASL+TYSGP    GS+SLRSESSTTST SFAF
Sbjct: 361 YRTSDSRLLSSQNMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAF 418

Query: 433 PILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 455
           PILQ+EWNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 PILQTEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF 418

[Close]
BLAST of CmoCh05G004840 vs. NCBI nr
Match: gi|778705661|ref|XP_011655720.1| (PREDICTED: uncharacterized protein LOC101218906 isoform X1 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 160/492 (32.52%), Postives = 238/492 (48.37%), Query Frame = 1 

Query: 9   IYHSMTSPNCVPESLECNYSKLQHRVMSINPIGLSCQERINQEDSSQSSYFSSDGNSCMT 68
           + HS  SP  VP+S EC+   L    M +       +   N + +  + + ++D +  + 
Sbjct: 9   VCHSNASPKFVPKSFECDNDALNSGGMKLED---QKEFTNNLKGNVDADHNNTDADGWVA 68

Query: 69  TKINGSSVGCSVDNADGISAFAAPSN--MKPLFS------YVDKSVMECQMSKTIVYDKE 128
            K     +    ++ D + AF +P N   K   S      Y++KSV+ECQ+ + IV  KE
Sbjct: 69  KKRECLDLD-DFNDYDDVKAFVSPLNNSCKADLSEEDSELYMEKSVVECQLPELIVCYKE 128

Query: 129 INVNDVKDICIDEGVTSLDNYFFRSKDEKSICKIVPLEKDQTEGSVKEQENSSEMSKSIA 188
              N VKDICID+G      +   S DEK +C I+P  KD  + SV E +     +   +
Sbjct: 129 NICNIVKDICIDDGTPRDKLFCGSSLDEKDVCSILPPTKDWKDESVGELKQRDMFA---S 188

Query: 189 DDRKVSLEDHFAMDWTTHNDAKETKFNPSEPKVSMHISSQKLVKKGYSSESFDNMGVQWN 248
           DD + S E   + D     D+K+    P       + +   +      +ES   +     
Sbjct: 189 DDSEHS-ESFGSKDSPNEYDSKDLAITPEAEYDVAYFTDNDMPMTDLVTESLKPL----- 248

Query: 249 SNGYFQYNGETILALISGEKEKSDDPDSASKSVESCNSNSALRS----TAEPPKDVNRTH 308
           +N   + + ++    I  E   S+ P     + ES ++     S    +AE PK  +  +
Sbjct: 249 TNNEIKPHPQSEQVFI--ETTCSEVPVLVRVAEESFSNTREATSESITSAEDPKHGDSAN 308

Query: 309 QSAYNNESENGSIAFNFNSICSVANGVEEHHGNTNLNYPAPITS-SAGTQEWRGSDS-GT 368
             +YN++ + G+I F+FNS+ S A+   E   N +LN  AP TS S G +E   S+   +
Sbjct: 309 GMSYNSKVDKGNITFDFNSLASTASDGLERSDNGDLNSSAPSTSASVGCKETTSSNPLAS 368

Query: 369 QVSTNLECRTS----------------------------DSRLVSSQSTYDIGESSFSAA 428
                 EC T+                            DS  VSS+ +  +GE+SFS A
Sbjct: 369 ADKCEAECHTTSSNPKHVEYEDLRRVEYEDIPKTEVGNFDSHTVSSEVSQGVGETSFSVA 428

Query: 429 DPLASLITYSG----PGSVSLRSESSTTSTHSFAFPILQSEWNSSPVKMVKAERRHYRKY 455
            PL SLI+ SG     GS+S RS+SSTTST SFAFPILQSEW SSPV+MVK +R+H +K+
Sbjct: 429 -PLGSLISNSGRIGYSGSISHRSDSSTTSTRSFAFPILQSEWTSSPVRMVKPDRKHLQKH 484

The following BLAST results are available for this feature:
BLAST of CmoCh05G004840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh05G004840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFP8_CUCSA4.9e-14467.03Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1[more]
B9RLG9_RICCO2.7e-3335.77Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466920 PE=4 SV=1[more]
A0A0D2PTD2_GOSRA3.3e-3131.69Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1[more]
A0A0D2ND06_GOSRA3.3e-3131.69Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1[more]
A0A0B0P7Y4_GOSAR4.3e-3133.50Formate--tetrahydrofolate ligase OS=Gossypium arboreum GN=F383_07128 PE=4 SV=1[more]
BLAST of CmoCh05G004840 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03810.12.7e-2430.10 18S pre-ribosomal assembly protein gar2-related[more]
AT1G13650.21.2e-0849.35 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assemb... [more]
BLAST of CmoCh05G004840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452821|ref|XP_004144157.1|4.4e-14667.25PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus][more]
gi|700192470|gb|KGN47674.1|7.1e-14467.03hypothetical protein Csa_6G370190 [Cucumis sativus][more]
gi|659089264|ref|XP_008445414.1|1.6e-14366.10PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo][more]
gi|659089276|ref|XP_008445421.1|3.9e-14266.96PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo][more]
gi|778705661|ref|XP_011655720.1|1.1e-3832.52PREDICTED: uncharacterized protein LOC101218906 isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G004840.1CmoCh05G004840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33914FAMILY NOT NAMEDcoord: 101..333
score: 4.6E-56coord: 351..454
score: 4.6
NoneNo IPR availablePANTHERPTHR33914:SF218S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEINcoord: 101..333
score: 4.6E-56coord: 351..454
score: 4.6