CmoCh12G000950 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G000950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description18S pre-ribosomal assembly protein gar2-related protein
LocationCmo_Chr12 : 511999 .. 514440 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTGGGTAACAACAATTTCTTTTGTCTTGTATTCTACTTGAAAGTTCTTCATTTTTATTACTGTTTTTATTCCCTCTTTGCTTTTCTACCCAATGATCTTATGTTGTTTTGTAAAAGGAAAGTTTATTTACTATCGTTTTCGTGCTATTTACGCTCGTCAATCTACTGCCTTTTGTCCAACTTGCTGTTCTAAGTTACATTTGTAATTATGTATCTGCAGAAAGTGACCTTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGACAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAGCCTAGGTATCCAGGTATGCATATTTCTGGTCAAGTTATTAATCATGTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACCCTTTATAAATGTGTGGAAACCTCTCCCTAGCAGACGCATTTTAAAAACTTTGAGGGAAACTCCGAAAGGGAAAGCCCAAAGAAGGCAATATTTGCTAACGGTGGACTTGGTCTGTTACAAATGGTATTAGAGCCAAACACCGAGCGGTGTGCTAGCGAGAATGCTGGGCCCCGAAGGGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCCGATGCGTTTTAAAAACTTTGAGATAAATCCCGTAAGGGAAAACCCAAAGAGGACAATATCTACTAGCGGTGTGCTTGGGCTTGAACTGTTACAGATGTTCCTCTTGCACCTCATGTTCAAGTGATTCTGAACTTTTCAGTGCACTTCATGTTCAAGTGATTCTGAACTTTTCAGGTTTGATGTTTTTCAGAATTGGTTGATGTAGGTTGGATTTCTTGTAATGGCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCTGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACAACCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGTCAATGGTGAAGAAGAACACCATGGAAATATCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGCAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATGTAAGTAGCAAGCAATCTCTCTTCTCTTCTTGATCTATCCTGTCCTAAATTGTAATCCAAGGTGAATGATATTTACAGATTACAACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGTTTTGCTATCAGTAGAGGTAGATTCTGTCCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATCTCTTTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTGTATAAGAACACGATATGACATAGTTTCTCTGCATAGAATGATATTATCACAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAAT

mRNA sequence

ATGAAACTGGAAAGTGACCTTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGACAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAGCCTAGGTATCCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCTGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACAACCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGTCAATGGTGAAGAAGAACACCATGGAAATATCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGCAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGTTTTGCTATCAGTAGAGGTAGATTCTGTCCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATCTCTTTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTGTATAAGAACACGATATGACATAGTTTCTCTGCATAGAATGATATTATCACAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAAT

Coding sequence (CDS)

ATGAAACTGGAAAGTGACCTTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGACAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAGCCTAGGTATCCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCTGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACAACCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGTCAATGGTGAAGAAGAACACCATGGAAATATCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGCAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGA
Homology
[Close]
BLAST of CmoCh12G000950 vs. TrEMBL
Match: A0A0A0KFP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 3.8e-141
Identity = 288/439 (65.60%), Postives = 335/439 (76.31%), Query Frame = 1 

Query: 13  MTSSNCVPESIECNYN-TELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTK 72
           MTS N  PES+ECNY+ T LQH++++ +P GL  ++KIN E+ +QS  S+  GNSC+ TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INHSSVDCFDDN-AEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDI 132
           IN SS D FDDN AEGI+AF +SS  K S SYVDKSVMECQMS  IVCD+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVPSLVNFIFRSTDEKSSYKTLPL--NQNEGSIKEQKNSSEVLESIADNKKISLED 192
           CID+GV SL NF F+ST EKS  K  PL  ++NEGSIKE++ SSEV + IAD++K+SLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSE 252
           HFA DW+THNDAKDL QIEE KLN SEP++ +QKLV+ S+SSESLD +G+QIS EK N E
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 253 DPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGE 312
           DP+SA KSV+SCND  AL + AE P +NIP   PS +N+EFE GS  L  NSISP+ NG 
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPA-HPSGYNDEFENGSIALTFNSISPVANGG 300

Query: 313 EEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQV--------STSRLISSQTAHDSGE 372
           EE                   QEC G +DS  GTQV        S SRL+SSQ  HD GE
Sbjct: 301 EER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGE 360

Query: 373 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE 432
           SSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAE
Sbjct: 361 SSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAE 419

Query: 433 RRHYRKYRGWREGLLCCRF 440
           RRHYRKYRGWREGLLCC+F
Sbjct: 421 RRHYRKYRGWREGLLCCKF 419

[Close]
BLAST of CmoCh12G000950 vs. TrEMBL
Match: A0A022QJK2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006975mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.0e-33
Identity = 142/419 (33.89%), Postives = 203/419 (48.45%), Query Frame = 1 

Query: 49  INHEDAIQSPSSTGGGNSCLTTK----INHSSVDC----FDDNAEGINAFMSSSGKKSSD 108
           I+H         +   N+C   K    + H ++ C      D++   N+    S    ++
Sbjct: 26  IDHLSGSDKDLDSLSSNTCDKDKERQNLGHENMPCNGNESQDSSPPCNSASGLSQTTDAN 85

Query: 109 SYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVNFIFRST--DEKSSYKTLPL 168
            + DK+V+EC M    V  KEI+   VKDIC+DEG P   + I  S   D+       P 
Sbjct: 86  LFTDKNVLECGMPEFEVFCKEIDYQIVKDICVDEGRPDNKDKITESCKDDKSDGLFHQPT 145

Query: 169 NQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHN-DAKDLNQIEEAKLNQSEPQ 228
           N N   I   + +    +   D K  S +  F  D +  + D     Q  E   NQ E  
Sbjct: 146 NSNHSEITITEANQCGTKEENDGKSPS-DTSFDEDTAKKDCDPAKSVQTSEITDNQEEDS 205

Query: 229 V-----PVQKLVRESHSSESLDSLG-----IQISSEKANSEDPASAFKSVESCNDNSALG 288
           +     PVQ+LV  +     L  LG     +    ++  +E PAS   +  S +      
Sbjct: 206 LVGIKPPVQELVTRNSLRSFLYPLGDEGGVVTQPPDQILNEKPASRSSAATSSS------ 265

Query: 289 TEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHGNINSDYPGPMTSSA 348
            EAE   E++       +N+E E G+ T N +S    V    +   +++S      + ++
Sbjct: 266 AEAEGVEEDVEASSSVLYNSEVESGTITFNFDST---VTENMKPQDSVDSS-----SVTS 325

Query: 349 GTQECYGS-------NDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIA 408
              +C GS       N+        +S +IS Q  ++ GE+SF+A    ASLVTYSGPIA
Sbjct: 326 NNIDCVGSSKDREDENEKNSEQNEGSSAIISRQMKYEEGETSFAA----ASLVTYSGPIA 385

Query: 409 YSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 440
           YSGS+SLRS+ S  S RSFAFPILQ SEWNSSPV+M KA+RRH+RK++GWR GLLCCRF
Sbjct: 386 YSGSLSLRSDGSAASGRSFAFPILQ-SEWNSSPVRMAKADRRHFRKHKGWRSGLLCCRF 424

[Close]
BLAST of CmoCh12G000950 vs. TrEMBL
Match: A0A0B2RDJ3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014766 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33
Identity = 127/377 (33.69%), Postives = 183/377 (48.54%), Query Frame = 1 

Query: 100 DSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLN 159
           D Y+DK+V +C+   + VC KE N + VKDICIDEGV      +F + D++ ++   P +
Sbjct: 132 DGYMDKTVTQCEPH-LEVCYKESNYHVVKDICIDEGVLKKDKVMFLNPDDEKAHNFFPSD 191

Query: 160 QNEGSIKEQKNSS----------------------EVLESIADNKKISLEDHFAT----- 219
             E   K++ N+S                      E  E   DN  I++     T     
Sbjct: 192 SYENKEKQKDNTSIGVLSLIPTGEKAHNFFPSESYENKEKQKDNTSINVLSLTPTKESDK 251

Query: 220 DWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRE---------SHSSESLDSLGIQISSE 279
           D + H+  KDL   +E    +    V  +  + E         +  S S D  G QIS+E
Sbjct: 252 DPANHDQPKDLMHKDEDATEKVSSNVNKETPLPEDKVLLQDLLAQDSVSSDDKGEQISNE 311

Query: 280 KANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISP 339
                 P  +  +VE            E+P+  +   + +  N   EKGS T  L+   P
Sbjct: 312 PELHSQPEESKNTVEE--------AILETPSLALEDDESNNDNVLSEKGSFTHQLDPSVP 371

Query: 340 MVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQ-VSTSRLISSQTAHDSGESS 399
              G+E+ H              AG  +C     +    +  S  + ++    H  GE+S
Sbjct: 372 SDCGKEDCH-------------QAGVCKCDEIQQTMKPVEGKSDDQAVTGTVRHSLGEAS 431

Query: 400 FSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERR 440
           FSA+ P++  ++YSGP+ YSGSISLRS+SSTTSTRSFAFPI+ QSEWNSSPV+M KA+R 
Sbjct: 432 FSAIGPMSGRISYSGPVPYSGSISLRSDSSTTSTRSFAFPII-QSEWNSSPVRMAKADRS 485

[Close]
BLAST of CmoCh12G000950 vs. TrEMBL
Match: I1JEJ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G122700 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33
Identity = 127/377 (33.69%), Postives = 183/377 (48.54%), Query Frame = 1 

Query: 100 DSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLN 159
           D Y+DK+V +C+   + VC KE N + VKDICIDEGV      +F + D++ ++   P +
Sbjct: 132 DGYMDKTVTQCEPH-LEVCYKESNYHVVKDICIDEGVLKKDKVMFLNPDDEKAHNFFPSD 191

Query: 160 QNEGSIKEQKNSS----------------------EVLESIADNKKISLEDHFAT----- 219
             E   K++ N+S                      E  E   DN  I++     T     
Sbjct: 192 SYENKEKQKDNTSIGVLSLIPTGEKAHNFFPSESYENKEKQKDNTSINVLSLTPTKESDK 251

Query: 220 DWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRE---------SHSSESLDSLGIQISSE 279
           D + H+  KDL   +E    +    V  +  + E         +  S S D  G QIS+E
Sbjct: 252 DPANHDQPKDLMHKDEDATEKVSSNVNKETPLPEDKVLLQDLLAQDSVSSDDKGEQISNE 311

Query: 280 KANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISP 339
                 P  +  +VE            E+P+  +   + +  N   EKGS T  L+   P
Sbjct: 312 PELHSQPEESKNTVEE--------AILETPSLALEDDESNNDNVLSEKGSFTHQLDPSVP 371

Query: 340 MVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQ-VSTSRLISSQTAHDSGESS 399
              G+E+ H              AG  +C     +    +  S  + ++    H  GE+S
Sbjct: 372 SDCGKEDCH-------------QAGVCKCDEIQQTMKPVEGKSDDQAVTGTVRHSLGEAS 431

Query: 400 FSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERR 440
           FSA+ P++  ++YSGP+ YSGSISLRS+SSTTSTRSFAFPI+ QSEWNSSPV+M KA+R 
Sbjct: 432 FSAIGPMSGRISYSGPVPYSGSISLRSDSSTTSTRSFAFPII-QSEWNSSPVRMAKADRS 485

[Close]
BLAST of CmoCh12G000950 vs. TrEMBL
Match: A0A0R0L6H8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G122700 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.5e-33
Identity = 133/408 (32.60%), Postives = 195/408 (47.79%), Query Frame = 1 

Query: 69  TTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVK 128
           +++ +  S DC  +  E   A   +S     D Y+DK+V +C+   + VC KE N + VK
Sbjct: 63  SSQYHMESADCMKNEYE---AKGRNSPWNPEDGYMDKTVTQCEPH-LEVCYKESNYHVVK 122

Query: 129 DICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSS---------------- 188
           DICIDEGV      +F + D++ ++   P +  E   K++ N+S                
Sbjct: 123 DICIDEGVLKKDKVMFLNPDDEKAHNFFPSDSYENKEKQKDNTSIGVLSLIPTGEKAHNF 182

Query: 189 ------EVLESIADNKKISLEDHFAT-----DWSTHNDAKDLNQIEEAKLNQSEPQVPVQ 248
                 E  E   DN  I++     T     D + H+  KDL   +E    +    V  +
Sbjct: 183 FPSESYENKEKQKDNTSINVLSLTPTKESDKDPANHDQPKDLMHKDEDATEKVSSNVNKE 242

Query: 249 KLVRE---------SHSSESLDSLGIQISSEKANSEDPASAFKSVESCNDNSALGTEAES 308
             + E         +  S S D  G QIS+E      P  +  +VE            E+
Sbjct: 243 TPLPEDKVLLQDLLAQDSVSSDDKGEQISNEPELHSQPEESKNTVEE--------AILET 302

Query: 309 PNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHGNINSDYPGPMTSSAGTQEC 368
           P+  +   + +  N   EKGS T  L+   P   G+E+ H              AG  +C
Sbjct: 303 PSLALEDDESNNDNVLSEKGSFTHQLDPSVPSDCGKEDCH-------------QAGVCKC 362

Query: 369 YGSNDSAFGTQ-VSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSES 428
                +    +  S  + ++    H  GE+SFSA+ P++  ++YSGP+ YSGSISLRS+S
Sbjct: 363 DEIQQTMKPVEGKSDDQAVTGTVRHSLGEASFSAIGPMSGRISYSGPVPYSGSISLRSDS 422

Query: 429 STTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 440
           STTSTRSFAFPI+ QSEWNSSPV+M KA+R HYRK R W++  LCC+F
Sbjct: 423 STTSTRSFAFPII-QSEWNSSPVRMAKADRSHYRKQRWWKDSFLCCKF 444

[Close]
BLAST of CmoCh12G000950 vs. TAIR10
Match: AT2G03810.1 (AT2G03810.1 18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 125.6 bits (314), Expect = 7.8e-29
Identity = 130/389 (33.42%), Postives = 178/389 (45.76%), Query Frame = 1 

Query: 82  DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVN 141
           D +   +A + S  KK    Y+DK+V  C +  ++VC KE   + VKDIC+DEGVP    
Sbjct: 70  DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129

Query: 142 FIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHND-- 201
           F+F   D   S  T  L + +   K   N SE   +     K+  +  F  D  T  D  
Sbjct: 130 FLFGEKDSVKSSSTEDLMKAD---KTNVNPSETKSAEDSISKVD-DSEFCNDHKTDRDVE 189

Query: 202 ---AKDLNQIEEAKLNQSEPQVPVQKLVRESHS-----------SESLDSLGI---QISS 261
               +D    E    N ++  + V + V+ S +             S D + I     S 
Sbjct: 190 ESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDSK 249

Query: 262 EKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSIS 321
           E     D  S     +S N ++     ++S  E  P+Q         E  +    L    
Sbjct: 250 ECLTLGDILSREDEQKSLNQDN---ISSDSHEEQSPSQLQDKEKRSLETTAIETELEKTE 309

Query: 322 PMVNGEEE---------HHGNINSDYP-GPMTSSAGTQECYGSNDSAFGTQVSTSRLISS 381
               GEE+            N   + P  P T +   Q C   N S    + S+SR    
Sbjct: 310 EPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENHHQQNCLVEN-SYEDDKFSSSRF--- 369

Query: 382 QTAHDSGESSFSALD--PLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWN 440
                 GE+SFSA D   ++  +TYSGPIAYSGS+S+RS++STTS RSFAFPIL QSEWN
Sbjct: 370 ------GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPIL-QSEWN 429

[Close]
BLAST of CmoCh12G000950 vs. TAIR10
Match: AT1G13650.2 (AT1G13650.2 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4))

HSP 1 Score: 53.1 bits (126), Expect = 4.9e-07
Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 1 

Query: 335 SNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTT 394
           + +S        + L+     +  GE SF         +TY GP++ S ++S+RS+   T
Sbjct: 102 TEESEADNSCDDNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDG--T 161

Query: 395 STRSFAFPILQQSEWNSSPVKMVKAERRHYR 426
           S  SFA PILQ SEWNSSPV+M KAE    R
Sbjct: 162 SASSFALPILQ-SEWNSSPVRMGKAEETQLR 189

[Close]
BLAST of CmoCh12G000950 vs. NCBI nr
Match: gi|659089264|ref|XP_008445414.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 4.6e-148
Identity = 302/450 (67.11%), Postives = 345/450 (76.67%), Query Frame = 1 

Query: 1   MKLESDLPFYSSMTSSNCVPESIECNYN-TELQHQIVSIDPIGLLCREKINHEDAIQSPS 60
           MKLESD  FY+SMTS N  PES+ECNY+ T LQH+++S +P  L C+EKIN E+ IQS  
Sbjct: 1   MKLESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSH 60

Query: 61  STGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCD 120
           S+  GN C+ TKIN SS D FD+NAEGI+AF +SS  K S SYVDKSVMECQMS  IVCD
Sbjct: 61  SSCDGNICMITKINRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCD 120

Query: 121 KEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLES 180
           +EINVNDVKDICIDEGV SL NF F+ST EKS  K  PL +  NEGSIKE++ S EV + 
Sbjct: 121 QEINVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKF 180

Query: 181 IADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLG 240
           IAD+ K+SLEDHFA DW+THNDAKDL QIEE KLN SEP+V +QKLV++S SSESLD +G
Sbjct: 181 IADDHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIG 240

Query: 241 IQISSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLN 300
           +QIS EKAN EDP+SA KSV+SCND  ALG+ AE P+ NI    PS +N+EFE GS  L 
Sbjct: 241 VQISGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAAH-PSGYNDEFENGSIALT 300

Query: 301 LNSISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------SRL 360
           LNSISP+ NG EEH                  QEC G +DS  GTQVST        SRL
Sbjct: 301 LNSISPVANGGEEH------------------QECCGRSDSVIGTQVSTNLEYRTSDSRL 360

Query: 361 ISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEW 420
           +SSQ  +D GESSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQ +EW
Sbjct: 361 LSSQNMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQ-TEW 420

Query: 421 NSSPVKMVKAERRHYRKYRGWREGLLCCRF 440
           NSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 NSSPVKMVKAERRHYRKYRGWREGLLCCKF 430

[Close]
BLAST of CmoCh12G000950 vs. NCBI nr
Match: gi|449452821|ref|XP_004144157.1| (PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 1.6e-145
Identity = 296/451 (65.63%), Postives = 343/451 (76.05%), Query Frame = 1 

Query: 1   MKLESDLPFYSSMTSSNCVPESIECNYN-TELQHQIVSIDPIGLLCREKINHEDAIQSPS 60
           MKL+SD  FY SMTS N  PES+ECNY+ T LQH++++ +P GL  ++KIN E+ +QS  
Sbjct: 1   MKLDSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSH 60

Query: 61  STGGGNSCLTTKINHSSVDCFDDN-AEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVC 120
           S+  GNSC+ TKIN SS D FDDN AEGI+AF +SS  K S SYVDKSVMECQMS  IVC
Sbjct: 61  SSCDGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVC 120

Query: 121 DKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLE 180
           D+E+NVNDVKDICID+GV SL NF F+ST EKS  K  PL +  NEGSIKE++ SSEV +
Sbjct: 121 DQEVNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSK 180

Query: 181 SIADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSL 240
            IAD++K+SLEDHFA DW+THNDAKDL QIEE KLN SEP++ +QKLV+ S+SSESLD +
Sbjct: 181 FIADDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKI 240

Query: 241 GIQISSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTL 300
           G+QIS EK N EDP+SA KSV+SCND  AL + AE P +NIP   PS +N+EFE GS  L
Sbjct: 241 GLQISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAH-PSGYNDEFENGSIAL 300

Query: 301 NLNSISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------SR 360
             NSISP+ NG EE                   QEC G +DS  GTQV T        SR
Sbjct: 301 TFNSISPVANGGEER------------------QECCGRSDSVIGTQVLTNLEYRTSDSR 360

Query: 361 LISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSE 420
           L+SSQ  HD GESSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQ SE
Sbjct: 361 LLSSQNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQ-SE 420

Query: 421 WNSSPVKMVKAERRHYRKYRGWREGLLCCRF 440
           WNSSPVKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 421 WNSSPVKMVKAERRHYRKYRGWREGLLCCKF 431

[Close]
BLAST of CmoCh12G000950 vs. NCBI nr
Match: gi|659089276|ref|XP_008445421.1| (PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo])

HSP 1 Score: 516.2 bits (1328), Expect = 5.8e-143
Identity = 293/438 (66.89%), Postives = 336/438 (76.71%), Query Frame = 1 

Query: 13  MTSSNCVPESIECNYN-TELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTK 72
           MTS N  PES+ECNY+ T LQH+++S +P  L C+EKIN E+ IQS  S+  GN C+ TK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 73  INHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDIC 132
           IN SS D FD+NAEGI+AF +SS  K S SYVDKSVMECQMS  IVCD+EINVNDVKDIC
Sbjct: 61  INRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDIC 120

Query: 133 IDEGVPSLVNFIFRSTDEKSSYKTLPL--NQNEGSIKEQKNSSEVLESIADNKKISLEDH 192
           IDEGV SL NF F+ST EKS  K  PL  ++NEGSIKE++ S EV + IAD+ K+SLEDH
Sbjct: 121 IDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIADDHKVSLEDH 180

Query: 193 FATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSED 252
           FA DW+THNDAKDL QIEE KLN SEP+V +QKLV++S SSESLD +G+QIS EKAN ED
Sbjct: 181 FAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQISGEKANLED 240

Query: 253 PASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEE 312
           P+SA KSV+SCND  ALG+ AE P+ NI    PS +N+EFE GS  L LNSISP+ NG E
Sbjct: 241 PSSASKSVDSCNDTPALGSAAEPPSHNI-AAHPSGYNDEFENGSIALTLNSISPVANGGE 300

Query: 313 EHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------SRLISSQTAHDSGES 372
           EH                  QEC G +DS  GTQVST        SRL+SSQ  +D GES
Sbjct: 301 EH------------------QECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDIGES 360

Query: 373 SFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAER 432
           SFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPIL Q+EWNSSPVKMVKAER
Sbjct: 361 SFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPIL-QTEWNSSPVKMVKAER 418

Query: 433 RHYRKYRGWREGLLCCRF 440
           RHYRKYRGWREGLLCC+F
Sbjct: 421 RHYRKYRGWREGLLCCKF 418

[Close]
BLAST of CmoCh12G000950 vs. NCBI nr
Match: gi|700192470|gb|KGN47674.1| (hypothetical protein Csa_6G370190 [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 5.4e-141
Identity = 288/439 (65.60%), Postives = 335/439 (76.31%), Query Frame = 1 

Query: 13  MTSSNCVPESIECNYN-TELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTK 72
           MTS N  PES+ECNY+ T LQH++++ +P GL  ++KIN E+ +QS  S+  GNSC+ TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INHSSVDCFDDN-AEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDI 132
           IN SS D FDDN AEGI+AF +SS  K S SYVDKSVMECQMS  IVCD+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVPSLVNFIFRSTDEKSSYKTLPL--NQNEGSIKEQKNSSEVLESIADNKKISLED 192
           CID+GV SL NF F+ST EKS  K  PL  ++NEGSIKE++ SSEV + IAD++K+SLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSE 252
           HFA DW+THNDAKDL QIEE KLN SEP++ +QKLV+ S+SSESLD +G+QIS EK N E
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 253 DPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGE 312
           DP+SA KSV+SCND  AL + AE P +NIP   PS +N+EFE GS  L  NSISP+ NG 
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPA-HPSGYNDEFENGSIALTFNSISPVANGG 300

Query: 313 EEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQV--------STSRLISSQTAHDSGE 372
           EE                   QEC G +DS  GTQV        S SRL+SSQ  HD GE
Sbjct: 301 EER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGE 360

Query: 373 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE 432
           SSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAE
Sbjct: 361 SSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAE 419

Query: 433 RRHYRKYRGWREGLLCCRF 440
           RRHYRKYRGWREGLLCC+F
Sbjct: 421 RRHYRKYRGWREGLLCCKF 419

[Close]
BLAST of CmoCh12G000950 vs. NCBI nr
Match: gi|719967157|ref|XP_010261008.1| (PREDICTED: uncharacterized protein LOC104599949 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 155.2 bits (391), Expect = 2.6e-34
Identity = 134/360 (37.22%), Postives = 184/360 (51.11%), Query Frame = 1 

Query: 96  KKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVNFIFRS--TDEKSSY 155
           +K +  Y DK VMEC++  + V  KE     VKDICIDEGVPSL   +  +   D KS +
Sbjct: 131 EKVTGFYTDKVVMECELPDLTVGFKEDPYRVVKDICIDEGVPSLDKILTENDEVDYKSCF 190

Query: 156 KTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQ 215
               L+ N    KE+ +   VL S+ + K + +E +   D         LNQ     L+Q
Sbjct: 191 PHTGLDVNSDLTKEKDS---VLPSLNEMKSL-VESYCNKDI--------LNQCNSEVLHQ 250

Query: 216 SEPQVPVQKLVRESHSSESLDSLGIQISSEKANSED----PAS--AFKSVESCNDNSALG 275
            +  V  +     + + E +      +   K ++ED    P++  + K  +  N +S+  
Sbjct: 251 KDEYVDEEDKTAHNSTDEVIPG---SVPLGKLDTEDSYIKPSNFGSNKDQQQSNQDSSKE 310

Query: 276 TEAE-----SPNENIPTQQPS---AHNNEFEKGSTTLNLNSISPMVNGEEEHHGNINSDY 335
             AE     SP E      P+     NN+ E GST ++ +   P    E     +  +D 
Sbjct: 311 APAEKYGISSPTEESDDSNPANKVPFNNKVENGSTIMSFHPSKPTTREET----STKADS 370

Query: 336 PGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPI 395
           P P+             D    +   +SR +  Q  H  GESSFSA  P++  +TYSGP+
Sbjct: 371 PQPLHILLSMSRL---EDGTVDSLTGSSRSLCIQHGH--GESSFSAAGPMSGSITYSGPV 430

Query: 396 AYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 440
            YSGSISLRS+SSTTSTRSFAFPIL  SEWNSSPVKM KA RR++ K+RGWR  LLCCRF
Sbjct: 431 PYSGSISLRSDSSTTSTRSFAFPIL-HSEWNSSPVKMAKANRRNFHKHRGWRMNLLCCRF 465

The following BLAST results are available for this feature:
BLAST of CmoCh12G000950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh12G000950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFP8_CUCSA3.8e-14165.60Uncharacterized protein OS=Cucumis sativus GN=Csa_6G370190 PE=4 SV=1[more]
A0A022QJK2_ERYGU2.0e-3333.89Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006975mg PE=4 SV=1[more]
A0A0B2RDJ3_GLYSO3.4e-3333.69Uncharacterized protein OS=Glycine soja GN=glysoja_014766 PE=4 SV=1[more]
I1JEJ9_SOYBN3.4e-3333.69Uncharacterized protein OS=Glycine max GN=GLYMA_02G122700 PE=4 SV=1[more]
A0A0R0L6H8_SOYBN4.5e-3332.60Uncharacterized protein OS=Glycine max GN=GLYMA_02G122700 PE=4 SV=1[more]
BLAST of CmoCh12G000950 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03810.17.8e-2933.42 18S pre-ribosomal assembly protein gar2-related[more]
AT1G13650.24.9e-0739.56 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assemb... [more]
BLAST of CmoCh12G000950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089264|ref|XP_008445414.1|4.6e-14867.11PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo][more]
gi|449452821|ref|XP_004144157.1|1.6e-14565.63PREDICTED: uncharacterized protein LOC101217989 [Cucumis sativus][more]
gi|659089276|ref|XP_008445421.1|5.8e-14366.89PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo][more]
gi|700192470|gb|KGN47674.1|5.4e-14165.60hypothetical protein Csa_6G370190 [Cucumis sativus][more]
gi|719967157|ref|XP_010261008.1|2.6e-3437.22PREDICTED: uncharacterized protein LOC104599949 isoform X1 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G000950.1CmoCh12G000950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33914FAMILY NOT NAMEDcoord: 87..439
score: 5.6
NoneNo IPR availablePANTHERPTHR33914:SF218S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEINcoord: 87..439
score: 5.6