Carg20572 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20572
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	18s pre-ribosomal assembly gar2-related protein
Location	Cucurbita_argyrosperma_scaffold_113 : 388459 .. 391183 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTGGGTAATAACAATTTCTTTTGTCTTGTATTCTACTTGAAAGTTCTTCATTTCTATTATTGTTATTATTCCCTCTTTGCTTTTCTACCCAATGATCTTATGTTGTTTTGTAAAAGGAAAGTTTATTTACTATCGTTTTCGTGCTATTTACGCTCGTCAATCTACTGCCTTTTGTCCAACTTGCTGTTCTAAGTTACATTTGTAATTATGTATCTGCAGAAAGTGACCCTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGAAAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAACCTAGGTATCCAGGTATGCATATTTCTGGACAAGTTATTAATCATGTTGTGAGATCCCACATTGATTGGAGAGGAGAACGAAACATCGTTTATAAATGTGTGGAAACCTCTCCCAAGCAAATGCGTTTTAAAAACCTTGAGGGAAACTCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAACGGTGGGCTTGGTCTGTTACAAATGGTATCAAAGCCAGATACCGAGCGGTGTTGCTAGCGAGAATGTTGGGTCCTGAAGGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACTCTCTATAAGGGTGTGGGAACCTCTCTCTACCAGACACGTTTTAAAAACCTTGAGGGAAACCCCGTAAGGGAAAGCCCAAGGAGGACAATATCTACTAGTGGTGTGCTTGGACTTGAACTTTTACGCATGTTCCTCTTGCACTTCATGTTCTATTTCCATCCTTTTCGTTTCCAAGTGTGTACTCTCTGGAACAGGTTGAAATATATAATTAGGATAGAATATTGAAGCCCTTTTAGCTCAAGTGATTCTGAACTTTTCAGGTTTGATGTTTTTTCAGAATTGGTTGATGTAGGTTGGATTTCTTGTAATGGCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCCGTTGAATCTTGCAATGACAATTCTGCTTCGGGAACTGATGCAGAATCACCAAATGAAAACATTCCAGCACAACACCCTTCAGCTCATAATAACGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGCCAATGCTGAAGAAGAACACCATGGAAATGTCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGTAACGATTCTGCATTCGGAACCCAAGTTTCGACAGGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATGTAAGTAGCAAGCAATCTCTCTTCTCTTCTCTTCTTGATCTATCCTGTCCTAAATTGTAATCCAAGGTGAATGATATTTACAGATTACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGCTTTGCTATCAGTAGAGGTAGATTCTGTCCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATCTCTTTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTATATAAGAACACGATATGACATAGTTTCTCTGCATAGAATCATATTATCACAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAATTCTTTCATTTGATAAGAAAAGTCGTTCTCTTGAGGAAATTGTCCACCATTAATAAAGACGTTCATCGAGTATGTATTATTTAAGTGATTATTTCAAAATTTTATTCTGACTTTATCTCGTATATCTTATTTATCGAAATTGTTTAAAGAAACGTTACACTAAAACTAGCTGAACATCTAAATCATACACTACAACGAGTAGTATATCAGAAGTCAACATGTTAACA

mRNA sequence

ATGAAACTGGAAAGTGACCCTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGAAAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCCGTTGAATCTTGCAATGACAATTCTGCTTCGGGAACTGATGCAGAATCACCAAATGAAAACATTCCAGCACAACACCCTTCAGCTCATAATAACGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGCCAATGCTGAAGAAGAACACCATGGAAATGTCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGTAACGATTCTGCATTCGGAACCCAAGTTTCGACAGGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGCTTTGCTATCAGTAGAGGTAGATTCTGTCCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATCTCTTTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTATATAAGAACACGATATGACATAGTTTCTCTGCATAGAATCATATTATCACAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAATTCTTTCATTTGATAAGAAAAGTCGTTCTCTTGAGGAAATTGTCCACCATTAATAAAGACGTTCATCGAGTATGTATTATTTAAGTGATTATTTCAAAATTTTATTCTGACTTTATCTCGTATATCTTATTTATCGAAATTGTTTAAAGAAACGTTACACTAAAACTAGCTGAACATCTAAATCATACACTACAACGAGTAGTATATCAGAAGTCAACATGTTAACA

Coding sequence (CDS)

ATGAAACTGGAAAGTGACCCTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGAAAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCCGTTGAATCTTGCAATGACAATTCTGCTTCGGGAACTGATGCAGAATCACCAAATGAAAACATTCCAGCACAACACCCTTCAGCTCATAATAACGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGCCAATGCTGAAGAAGAACACCATGGAAATGTCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGTAACGATTCTGCATTCGGAACCCAAGTTTCGACAGGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGA

Protein sequence

MKLESDPPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPISSEKANSEDPASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNSISPMANAEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVSTGRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

Homology

[Close]

BLAST of Carg20572 vs. NCBI nr
Match: XP_023538554.1 (uncharacterized protein LOC111799296 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538555.1 uncharacterized protein LOC111799296 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 779.6 bits (2012), Expect = 5.2e-222
Identity = 407/438 (92.92%), Postives = 411/438 (93.84%), Query Frame = 0


Query: 1   MKLESDPPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
           MKLESDPPFYSSMTSS+CVPESIECNYNTELQHQIVSIDPIGLLC+EKINHEDAIQSPSS
Sbjct: 1   MKLESDPPFYSSMTSSDCVPESIECNYNTELQHQIVSIDPIGLLCQEKINHEDAIQSPSS 60

Query: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK 120
           TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK
Sbjct: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK 120

Query: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180
           EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD
Sbjct: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180

Query: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVP--------------------I 240
           NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVP                    I
Sbjct: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDNLGIQI 240

Query: 241 SSEKANSEDPASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNS 300
           SSEK NSEDPASAFK VESCNDNSA GT+AESPNENIP QHPSAHNNEFEKGSTTLNLNS
Sbjct: 241 SSEKGNSEDPASAFKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNS 300

Query: 301 ISPMANAEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVSTGRLISSQTAHDSGE 360
           ISPMANAEEE HGN+NSDYPGP TSSAGTQECYGSNDSAFGTQVST RLISSQTAHDSGE
Sbjct: 301 ISPMANAEEELHGNINSDYPGPKTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGE 360

Query: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 419
           SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 420

[Close]

BLAST of Carg20572 vs. NCBI nr
Match: XP_022951209.1 (uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata] >XP_022951210.1 uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata] >XP_022951211.1 uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata])

HSP 1 Score: 776.2 bits (2003), Expect = 5.8e-221
Identity = 408/439 (92.94%), Postives = 410/439 (93.39%), Query Frame = 0


Query: 1   MKLESDPPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
           MKLESD PFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS
Sbjct: 1   MKLESDLPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60

Query: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK 120
           TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMS MIVCDK
Sbjct: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDK 120

Query: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180
           EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD
Sbjct: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180

Query: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVP--------------------I 240
           NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVP                    I
Sbjct: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI 240

Query: 241 SSEKANSEDPASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNS 300
           SSEKANSEDPASAFKSVESCNDNSA GT+AESPNENIP Q PSAHNNEFEKGSTTLNLNS
Sbjct: 241 SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS 300

Query: 301 ISPMANAEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVSTGRLISSQTAHDSGE 360
           ISPM N EEEHHGN+NSDYPGPMTSSAGTQECYGSNDSAFGTQVST RLISSQTAHDSGE
Sbjct: 301 ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGE 360

Query: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAE 419
           SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAE
Sbjct: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE 420

[Close]

BLAST of Carg20572 vs. NCBI nr
Match: XP_023002043.1 (uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002044.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002045.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002046.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima])

HSP 1 Score: 767.3 bits (1980), Expect = 2.7e-218
Identity = 401/438 (91.55%), Postives = 407/438 (92.92%), Query Frame = 0


Query: 1   MKLESDPPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
           MKLESDPPFYSSMTSSNCVPESIE NYNTELQHQI+SIDPIGLLCREKINHEDAIQSPSS
Sbjct: 1   MKLESDPPFYSSMTSSNCVPESIEGNYNTELQHQIISIDPIGLLCREKINHEDAIQSPSS 60

Query: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK 120
           TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK
Sbjct: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK 120

Query: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180
           EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGS+KEQKNSSEVLESIAD
Sbjct: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSVKEQKNSSEVLESIAD 180

Query: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQV--------------------PI 240
           NKKISLEDHFA+DWSTHNDAKDLNQIEEAKLNQSEPQV                     I
Sbjct: 181 NKKISLEDHFASDWSTHNDAKDLNQIEEAKLNQSEPQVLVQKLVRESHSSESLDNLGIQI 240

Query: 241 SSEKANSEDPASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNS 300
           SSEKANSEDPASAFKSVESCNDNSA GT+AES NENIP QHPSA NNEFEKGSTTLNLNS
Sbjct: 241 SSEKANSEDPASAFKSVESCNDNSALGTEAESTNENIPTQHPSARNNEFEKGSTTLNLNS 300

Query: 301 ISPMANAEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVSTGRLISSQTAHDSGE 360
           ISPMAN EEEHHGN+  D+PGPMTSSAGTQECYGSNDSAFGTQVST RLISSQTAHD GE
Sbjct: 301 ISPMANGEEEHHGNIKLDFPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDCGE 360

Query: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 419
           SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 420

[Close]

BLAST of Carg20572 vs. NCBI nr
Match: XP_022951212.1 (uncharacterized protein LOC111454119 isoform X2 [Cucurbita moschata] >XP_022951213.1 uncharacterized protein LOC111454119 isoform X2 [Cucurbita moschata] >XP_022951214.1 uncharacterized protein LOC111454119 isoform X2 [Cucurbita moschata])

HSP 1 Score: 752.3 bits (1941), Expect = 8.9e-214
Identity = 395/426 (92.72%), Postives = 397/426 (93.19%), Query Frame = 0


Query: 14  TSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 73
           T SNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN
Sbjct: 8   TGSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 67

Query: 74  HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICID 133
           HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMS MIVCDKEINVNDVKDICID
Sbjct: 68  HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICID 127

Query: 134 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 193
           EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD
Sbjct: 128 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 187

Query: 194 WSTHNDAKDLNQIEEAKLNQSEPQVP--------------------ISSEKANSEDPASA 253
           WSTHNDAKDLNQIEEAKLNQSEPQVP                    ISSEKANSEDPASA
Sbjct: 188 WSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSEDPASA 247

Query: 254 FKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNSISPMANAEEEHHG 313
           FKSVESCNDNSA GT+AESPNENIP Q PSAHNNEFEKGSTTLNLNSISPM N EEEHHG
Sbjct: 248 FKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHG 307

Query: 314 NVNSDYPGPMTSSAGTQECYGSNDSAFGTQVSTGRLISSQTAHDSGESSFSALDPLASLV 373
           N+NSDYPGPMTSSAGTQECYGSNDSAFGTQVST RLISSQTAHDSGESSFSALDPLASLV
Sbjct: 308 NINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLV 367

Query: 374 TYSGPIAYSGSISLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAERRHYRKYRGWREG 419
           TYSGPIAYSGSISLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAERRHYRKYRGWREG
Sbjct: 368 TYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREG 427

[Close]

BLAST of Carg20572 vs. NCBI nr
Match: XP_023538556.1 (uncharacterized protein LOC111799296 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023538558.1 uncharacterized protein LOC111799296 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023538559.1 uncharacterized protein LOC111799296 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023538560.1 uncharacterized protein LOC111799296 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 751.9 bits (1940), Expect = 1.2e-213
Identity = 393/425 (92.47%), Postives = 397/425 (93.41%), Query Frame = 0


Query: 14  TSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 73
           T S+CVPESIECNYNTELQHQIVSIDPIGLLC+EKINHEDAIQSPSSTGGGNSCLTTKIN
Sbjct: 8   TGSDCVPESIECNYNTELQHQIVSIDPIGLLCQEKINHEDAIQSPSSTGGGNSCLTTKIN 67

Query: 74  HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICID 133
           HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICID
Sbjct: 68  HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICID 127

Query: 134 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 193
           EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD
Sbjct: 128 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 187

Query: 194 WSTHNDAKDLNQIEEAKLNQSEPQVP--------------------ISSEKANSEDPASA 253
           WSTHNDAKDLNQIEEAKLNQSEPQVP                    ISSEK NSEDPASA
Sbjct: 188 WSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDNLGIQISSEKGNSEDPASA 247

Query: 254 FKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNSISPMANAEEEHHG 313
           FK VESCNDNSA GT+AESPNENIP QHPSAHNNEFEKGSTTLNLNSISPMANAEEE HG
Sbjct: 248 FKPVESCNDNSALGTEAESPNENIPTQHPSAHNNEFEKGSTTLNLNSISPMANAEEELHG 307

Query: 314 NVNSDYPGPMTSSAGTQECYGSNDSAFGTQVSTGRLISSQTAHDSGESSFSALDPLASLV 373
           N+NSDYPGP TSSAGTQECYGSNDSAFGTQVST RLISSQTAHDSGESSFSALDPLASLV
Sbjct: 308 NINSDYPGPKTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLV 367

Query: 374 TYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 419
           TYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL
Sbjct: 368 TYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGL 427

[Close]

BLAST of Carg20572 vs. TAIR10
Match: AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-09
Identity = 94/373 (25.20%), Postives = 143/373 (38.34%), Query Frame = 0


Query: 82  DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVN 141
           D +   +A + S  KK    Y+DK+V  C + +++VC KE   + VKDIC+DEGVP    
Sbjct: 70  DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129

Query: 142 FIFRSTDEKSSYKT---LPLNQNEGSIKEQKNSSEVLESIADNKKIS-------LEDHFA 201
           F+F   D   S  T   +  ++   +  E K++ + +  + D++  +       +E+   
Sbjct: 130 FLFGEKDSVKSSSTEDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTDRDVEESSG 189

Query: 202 TDW------STHNDAKDLNQIEEAKL--------NQSEPQVPISSEKANSEDPASAFKSV 261
            D+      S++ + + L   EE K         ++ EP      E A S+D  S  K  
Sbjct: 190 EDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDS--KEC 249

Query: 262 ESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNSISPMANAEEEHHGNVNS 321
            +  D  +   + +S N++                                         
Sbjct: 250 LTLGDILSREDEQKSLNQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309

Query: 322 DYPGPMTSSAGTQE----CYGSNDSAFGTQVSTGRLISSQTAHDS------GESSFSALD 381
                  S+  +QE    C                L+ +    D       GE+SFSA D
Sbjct: 310 XXXXXXXSTTTSQEPNKTCNEPEKPETENHHQQNCLVENSYEDDKFSSSRFGETSFSAAD 369

Query: 382 PLASLVTYSGPIAYSGSISLRSESSTTST--RSFAFPILQSEWNSSPVKMVKAERRHYRK 419
                                          RSFAFPILQSEWNSSPV+M KA++R  R+
Sbjct: 370 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSFAFPILQSEWNSSPVRMAKADKR--RQ 429

[Close]

BLAST of Carg20572 vs. TAIR10
Match: AT1G13650.2 (BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4))

HSP 1 Score: 45.8 bits (107), Expect = 7.5e-05
Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 315 SNDSAFGTQVSTGRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTT 374
           + +S          L+     +  GE SF         +TY GP++ S ++S+RS+   T
Sbjct: 102 TEESEADNSCDDNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDG--T 161

Query: 375 STRSFAFPILQSEWNSS 392
           S  SFA PILQSEWNSS
Sbjct: 162 SASSFALPILQSEWNSS 176

[Close]

BLAST of Carg20572 vs. TrEMBL
Match: tr|A0A1S3BDI6|A0A1S3BDI6_CUCME (uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 3.6e-139
Identity = 290/449 (64.59%), Postives = 329/449 (73.27%), Query Frame = 0


Query: 1   MKLESDPPFYSSMTSSNCVPESIECNY-NTELQHQIVSIDPIGLLCREKINHEDAIQSPS 60
           MKLESD  FY+SMTS N  PES+ECNY +T LQH+++S +P  L C+EKIN E+ IQS  
Sbjct: 1   MKLESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSH 60

Query: 61  STGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCD 120
           S+  GN C+ TKIN SS D FD+NAEGI+AF +SS  K S SYVDKSVMECQMSK IVCD
Sbjct: 61  SSCDGNICMITKINRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCD 120

Query: 121 KEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPL--NQNEGSIKEQKNSSEVLES 180
           +EINVNDVKDICIDEGV SL NF F+ST EKS  K  PL  ++NEGSIKE++ S EV + 
Sbjct: 121 QEINVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKF 180

Query: 181 IADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQ-------------------- 240
           IAD+ K+SLEDHFA DW+THNDAKDL QIEE KLN SEP+                    
Sbjct: 181 IADDHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIG 240

Query: 241 VPISSEKANSEDPASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLN 300
           V IS EKAN EDP+SA KSV+SCND  A G+ AE P+ NI A HPS +N+EFE GS  L 
Sbjct: 241 VQISGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNI-AAHPSGYNDEFENGSIALT 300

Query: 301 LNSISPMANAEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------GRL 360
           LNSISP+AN  EEH                  QEC G +DS  GTQVST         RL
Sbjct: 301 LNSISPVANGGEEH------------------QECCGRSDSVIGTQVSTNLEYRTSDSRL 360

Query: 361 ISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWN 419
           +SSQ  +D GESSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQ+EWN
Sbjct: 361 LSSQNMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWN 420

[Close]

BLAST of Carg20572 vs. TrEMBL
Match: tr|A0A1S3BCP3|A0A1S3BCP3_CUCME (uncharacterized protein LOC103488449 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 4.6e-134
Identity = 281/437 (64.30%), Postives = 319/437 (73.00%), Query Frame = 0


Query: 13  MTSSNCVPESIECNY-NTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTK 72
           MTS N  PES+ECNY +T LQH+++S +P  L C+EKIN E+ IQS  S+  GN C+ TK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 73  INHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDIC 132
           IN SS D FD+NAEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+EINVNDVKDIC
Sbjct: 61  INRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDIC 120

Query: 133 IDEGVPSLVNFIFRSTDEKSSYKTLPL--NQNEGSIKEQKNSSEVLESIADNKKISLEDH 192
           IDEGV SL NF F+ST EKS  K  PL  ++NEGSIKE++ S EV + IAD+ K+SLEDH
Sbjct: 121 IDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIADDHKVSLEDH 180

Query: 193 FATDWSTHNDAKDLNQIEEAKLNQSEPQ--------------------VPISSEKANSED 252
           FA DW+THNDAKDL QIEE KLN SEP+                    V IS EKAN ED
Sbjct: 181 FAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQISGEKANLED 240

Query: 253 PASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNSISPMANAEE 312
           P+SA KSV+SCND  A G+ AE P+ NI A HPS +N+EFE GS  L LNSISP+AN  E
Sbjct: 241 PSSASKSVDSCNDTPALGSAAEPPSHNI-AAHPSGYNDEFENGSIALTLNSISPVANGGE 300

Query: 313 EHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------GRLISSQTAHDSGES 372
           EH                  QEC G +DS  GTQVST         RL+SSQ  +D GES
Sbjct: 301 EH------------------QECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDIGES 360

Query: 373 SFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERR 419
           SFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQ+EWNSSPVKMVKAERR
Sbjct: 361 SFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSPVKMVKAERR 418

[Close]

BLAST of Carg20572 vs. TrEMBL
Match: tr|A0A0A0KFP8|A0A0A0KFP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G370190 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 9.6e-132
Identity = 276/438 (63.01%), Postives = 318/438 (72.60%), Query Frame = 0


Query: 13  MTSSNCVPESIECNY-NTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTK 72
           MTS N  PES+ECNY +T LQH++++ +P GL  ++KIN E+ +QS  S+  GNSC+ TK
Sbjct: 1   MTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSCDGNSCMITK 60

Query: 73  INHSSVDCFDD-NAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDI 132
           IN SS D FDD NAEGI+AF +SS  K S SYVDKSVMECQMSK IVCD+E+NVNDVKDI
Sbjct: 61  INRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEVNVNDVKDI 120

Query: 133 CIDEGVPSLVNFIFRSTDEKSSYKTLPL--NQNEGSIKEQKNSSEVLESIADNKKISLED 192
           CID+GV SL NF F+ST EKS  K  PL  ++NEGSIKE++ SSEV + IAD++K+SLED
Sbjct: 121 CIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIADDRKVSLED 180

Query: 193 HFATDWSTHNDAKDLNQIEEAKLNQSEPQ--------------------VPISSEKANSE 252
           HFA DW+THNDAKDL QIEE KLN SEP+                    + IS EK N E
Sbjct: 181 HFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQISGEKTNLE 240

Query: 253 DPASAFKSVESCNDNSASGTDAESPNENIPAQHPSAHNNEFEKGSTTLNLNSISPMANAE 312
           DP+SA KSV+SCND  A  + AE P +NIPA HPS +N+EFE GS  L  NSISP+AN  
Sbjct: 241 DPSSASKSVDSCNDTPALDSAAEPPKDNIPA-HPSGYNDEFENGSIALTFNSISPVANGG 300

Query: 313 EEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQV--------STGRLISSQTAHDSGE 372
           EE                   QEC G +DS  GTQV        S  RL+SSQ  HD GE
Sbjct: 301 EER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSSQNMHDIGE 360

Query: 373 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 419
           SSFSA+DPLASLVTYSGP+AYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 361 SSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAER 419

[Close]

BLAST of Carg20572 vs. TrEMBL
Match: tr|A0A1S3BFZ0|A0A1S3BFZ0_CUCME (uncharacterized protein LOC103489197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489197 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.9e-35
Identity = 157/492 (31.91%), Postives = 241/492 (48.98%), Query Frame = 0


Query: 1   MKLESDPPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
           MK+E +P    S  S   VP+S EC+ N +L    + ++           + DA  + ++
Sbjct: 1   MKVEGEPIVCHSNASPKFVPKSFECD-NDDLNSGGMKLEDQKEFTSILKGNMDAHHNNTA 60

Query: 61  TGGGNSCLTTKINHSSVDCFDDNAEGINAFMS--------SSGKKSSDSYVDKSVMECQM 120
             G    +  K     +D F+D  + + AF+S           ++ S+ Y++KS++ECQ+
Sbjct: 61  ADG---WVAKKRECLDLDDFND-YDDVKAFVSPLNNSCKVDLSEEDSELYMEKSIVECQL 120

Query: 121 SKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLP-----LNQNEGSIKE 180
            ++IVC KE   N VKDICID+G P    F   S DE+      P      +++ G +K+
Sbjct: 121 PELIVCYKENICNIVKDICIDDGTPRDKLFCGSSLDEEDVCSINPPTKDWKDESVGELKQ 180

Query: 181 Q----KNSSEVLESI--------ADNKKISL--EDHFATDWSTHND-------AKDLNQI 240
           +     + SE  ES          D+K ++   E  +   + T ND        + L  +
Sbjct: 181 RDMFASDDSEHSESFGSKDSPNQCDSKDLASTPEAEYDVAYFTDNDMPMTDLVTESLKPL 240

Query: 241 EEAKLNQSEPQVPISSEKANSEDPASAFKSVESCND----NSASGTDAESPNENIPAQHP 300
            + K+        +  E   SE P  A  + ES  +     S S T AE P +N  + + 
Sbjct: 241 TDNKIKPHPQSEQVCIETTCSEVPVLAHVADESFGNTRETTSESITSAEDP-KNSDSANG 300

Query: 301 SAHNNEFEKGSTTLNLNSISPMAN--AEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSA- 360
            ++N++ +KG+ T + NS++  A+   E   +G++NS  P   ++S G +E   SN  A 
Sbjct: 301 MSYNSKVDKGNITFDFNSLAFTASDGLERCDNGDLNSSAPS-TSASVGCKETTSSNPLAS 360

Query: 361 --------FGTQVSTGRL-------------------------ISSQTAHDSGESSFSAL 419
                     T  +  R+                         +SS+     GE+SFS +
Sbjct: 361 ADKSEPQCHNTSSNPKRVEYEDLXXXXXXXXXXXXXGNFDSHTVSSEVQQGVGETSFS-V 420

[Close]

BLAST of Carg20572 vs. TrEMBL
Match: tr|A0A218XXY7|A0A218XXY7_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr024187 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.9e-35
Identity = 132/389 (33.93%), Postives = 201/389 (51.67%), Query Frame = 0


Query: 46  REKINHEDAIQSPSSTGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSG-KKSSDSYVD 105
           R ++   D     S   G +S  +   +   ++  D  A   +++      K+  D   D
Sbjct: 53  RTEVEDHDGFWQVSECDGSDSLDSNTADSKIMEVKDYEALNGHSYEDPGHIKEKMDHLSD 112

Query: 106 KSVMECQMSKMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGS 165
           K   E ++  +++C +E +  D+KDICIDE +PS    +F +  EK    TL L + + S
Sbjct: 113 KIASELEVPDLVICYRENSYLDIKDICIDENMPSCEKILFETDVEKEDLHTLLLLEKDRS 172

Query: 166 IKEQKNSSEVLESIADNKKISLEDHFATDWSTHNDAKDLNQ----IEEAKLNQSEPQVPI 225
                 ++EV   + D  K S ED    +    + ++D+ Q    ++E   +    Q   
Sbjct: 173 SNLMTKTTEVGAPMPDYSK-SCEDQDHKNSFNQDGSEDILQAYVKVQEVAEDVLIGQTLS 232

Query: 226 SSEKANSEDPASAFKSVESCNDNSASGTDAESPNE--NIPAQHPSAHNNEFEKGSTTLNL 285
             + + S        + + C+ N+   T+  S     ++PA+ P A        +   + 
Sbjct: 233 KDQMSASXXXXXXXXAGDLCHKNTQMPTEEPSMESILSVPARTP-ADEGRASFSNAEESH 292

Query: 286 NSISPMANAEEE-HHGNVNSDYPGPMTSSA--------GTQECYGSNDSAFGTQVSTGRL 345
           NSI P  N EE     +  S+   P++ S+        G QE   SN S   T+V   R 
Sbjct: 293 NSIIP--NHEEAISTSSDESNNASPVSGSSNCSDRKDYGNQENQVSNQSI--TKVPDSRA 352

Query: 346 ISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWN 405
            S +  +  GE+SFS + P++ L+TYSGPIA+SGS+SLRS+SSTTSTRSFAFP+LQSEW+
Sbjct: 353 GSFRDQYSVGEASFSMVGPVSGLITYSGPIAFSGSLSLRSDSSTTSTRSFAFPVLQSEWH 412

Query: 406 SSPVKMVKAERRHYRKYRGWREGLLCCRF 419
           SSPV+M KA+RRH+RK RGWR+GLLCCRF
Sbjct: 413 SSPVRMAKADRRHFRKQRGWRQGLLCCRF 435

The following BLAST results are available for this feature:

BLAST of Carg20572 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538554.1	5.2e-222	92.92	uncharacterized protein LOC111799296 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022951209.1	5.8e-221	92.94	uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata] >XP_0229512...	[more]
XP_023002043.1	2.7e-218	91.55	uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002044...	[more]
XP_022951212.1	8.9e-214	92.72	uncharacterized protein LOC111454119 isoform X2 [Cucurbita moschata] >XP_0229512...	[more]
XP_023538556.1	1.2e-213	92.47	uncharacterized protein LOC111799296 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of Carg20572 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03810.1	5.0e-09	25.20	18S pre-ribosomal assembly protein gar2-related	[more]
AT1G13650.2	7.5e-05	37.66	BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein g...	[more]

BLAST of Carg20572 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20572 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDI6\|A0A1S3BDI6_CUCME	3.6e-139	64.59	uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BCP3\|A0A1S3BCP3_CUCME	4.6e-134	64.30	uncharacterized protein LOC103488449 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KFP8\|A0A0A0KFP8_CUCSA	9.6e-132	63.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G370190 PE=4 SV=1	[more]
tr\|A0A1S3BFZ0\|A0A1S3BFZ0_CUCME	4.9e-35	31.91	uncharacterized protein LOC103489197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A218XXY7\|A0A218XXY7_PUNGR	4.9e-35	33.93	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr024187 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20572-RA	Carg20572-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..284
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 166..418
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 89..228
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 89..228
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 166..418

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20572	Cla022044	Watermelon (97103) v1	carwmB0649
Carg20572	MELO3C011401	Melon (DHL92) v3.5.1	carmeB0649
Carg20572	ClCG08G010610	Watermelon (Charleston Gray)	carwcgB0633
Carg20572	CSPI06G19880	Wild cucumber (PI 183967)	carcpiB0683
Carg20572	Cucsa.328050	Cucumber (Gy14) v1	carcgyB0729
Carg20572	CmaCh05G004590	Cucurbita maxima (Rimu)	carcmaB0921
Carg20572	CmaCh12G001140	Cucurbita maxima (Rimu)	carcmaB0920
Carg20572	CmoCh05G004840	Cucurbita moschata (Rifu)	carcmoB0894
Carg20572	CmoCh12G000950	Cucurbita moschata (Rifu)	carcmoB0893
Carg20572	Lsi08G009150	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20572	Cp4.1LG07g01010	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20572	Cp4.1LG11g04010	Cucurbita pepo (Zucchini)	carcpeB0924
Carg20572	CsGy6G019410	Cucumber (Gy14) v2	carcgybB0649
Carg20572	MELO3C011401.2	Melon (DHL92) v3.6.1	carmedB0659
Carg20572	CsaV3_6G033910	Cucumber (Chinese Long) v3	carcucB0685
Carg20572	Cla97C08G153500	Watermelon (97103) v2	carwmbB0679
Carg20572	Bhi04G000938	Wax gourd	carwgoB0766

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20572	Carg09252	Silver-seed gourd	carcarB164

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20572	Cucumber (Chinese Long) v2	carcuB0673
Carg20572	Wax gourd	carwgoB0764