Cucsa.280130 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.280130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA-dependent RNA polymerase
Locationscaffold02633 : 30568 .. 32902 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAATTAAGGGAAAATTCTTTTTGGATGTTTGCTTCGAGGGAGGGGCTAAGTGCAGCAGATATCAGAGAATGGATGGGTGACTTTCATCATATAAGAAATGTGGCAAAATATGCTGCTCGACTTGGTCAATCTTTTGGCTCATCTAGAAAAACTTTGTGTGTTGAAGAACATGAAATTGAAGTTATTCCTGATGTAGAAGTTGAAAGGAAGAACATTATATATTGCTTCTCTGATGGGATTGGAAAAATATCTAAAACATTAGCTAAGAAAGTTGCTGAAAAATGTGGTTTGATCAATCATACACCATCTGCCTTTCAGATTCGATATGCTGGATACAAAGGTGTTGTAGCTATTGACCCTACGTCAAAAAAGAAATTGTCATTACGAAATAGTATGTTGAAGTATATGTCACTCGATACACAACTTGATGTTTTGTCGTGGAGTAAGTATCAACCATGTTTTCTTAATCGCCAGGTGATAAACCTTTTATCAACTCTTGGAATTGGGGACGATGTTTTTGTAAAAAAACAAAAGGAGGCTATAGATCAACTAGATTCTATTTTGGAAGATCCATCAAGGGCATTAGAAGTGTTGGAGTTGATGTCCCCTGGAGAAATGACTAGTATTTTGAAGGAACTACTTTCGTTTTACATGCCAAATGAAGAACCTTTTCTAAATATGATGTTGCGGACATTTCGAGCAAATAAATTGTTAGATTTAAAGACCAAGTCAAGGATATTTGTTCCGGAGGGAAGGACAATGATTGGTTGCCTGGATGAAACTCGAACACTAGAATATGGGCAAGTGTTTGTTCATTGCTCTGTCCCGCGAAGATCAAGCGAGGGTAATTTTGTAGTTAAGGGTAAAATAGTTGTTGCTAAAAATCCATGTTTACATCCGGGGGACGTGCGTGTGCTCGATGCTGTTGATGTGAAAGCTCTACATCACATGGTGGATTGTGTTGTTTTCCCACAGAAAGGAAAAAGGTAGGAAAGCTTACTATGTAGGAATTACTTATCTATTGGGTGTTTATCACATATCTATATTTGTTGCAAGTTCATTTATTTCATGTTTGCATGTAACTCATTTCTTAAAGATTTGTATTAAGTTACGTACATATATCCATTAGCTAGTCTATTTTTTGTAGCAATATTTTTTTTAATAGTTGTCCTTAACTAATATTTCAATATATTATATTAGGCCTCACCCAAACGAGTGTTCTGGGAGTGATTTGGATGGTGACTTGTACTTTGCTTGTTGGGATTTGGAGCTAACTTGCATCAAACAAGTCAAACCTATGAACTACGAGCCTGCACCAACTATACAATTGAATCATGATGTCACAATTGAGGTGTGTTTTTAAGTTGTACTATGACTATTTCAAATATCTTCATCGATTGTTATTTTTGTATAAATAATAACATGCATGCATTTGTTTCGGATTAAAAGTTTACAAGAATTTTTTTATTCTACAATGAGTTTTAATTAAATATGATTATTTTGATATAGGAAATTCAAGAATATTTTGCCAATTACATGGTGAATGATGGTATTGGAGCCATTGCAAATGCCCACACTGTCTTTGCAGATAAGAACTCTAAGAAGGCAATGAGTGTTGAATGTATTAAACTTGCAAAATTGTTCTCCATTGCTGTTGACTTCCCAAAGACTGGTGTGCCAGCAAACTTGCCACGCAACCTTCGTGTTCACGAGTATCCTGATTTCATGGACAAGCCCAATAAACCAACTTATGTATCAAATGGTGTTCTTGGGAAGCTTTTTAGAGGAGTGAAAGATGTTTCATCTGATGTCAACACCTTTGAAATTTTCACTAGGGAAGTTGCTACCAAGTACTACGATCCAGACATGGAAGTAGATGGTTTTGAAAAGTATCTAAGAGAAGCTTTTGATTACAAAACTAAGTACGACTTCAAATTGGGGAACCTTATGGATTATTATGGTATTAAAACAGAACCTGAATTAGTTAGTGGAAATGTCTTGAAGATGGCGAAGTCTTTTGATAAAAGGAATGACTTGGAACAAATTACCTTTGCTATGAAGTCTCTAAGAAAGGAGGTCAGGTCTTGGTTCAATGAGAATGAAAGTAAATTTACATACGACGACATTGAAGACGAATACGCAAAAGCATCCGCATGGTACTATGTCACATATCACCCAGATTATTGGGGTTGTTACAATGAAGGTATGCAAAGAGATCATTTTTTGAGTTTTCCATGGTGTGTTGCTGACAAACTTATTCAAATCAAAAGAGATAAGATGACATTGAAGAATTCTTACCCAGTGTCATCATTATTCCACAATTTTGACGGGTGA

mRNA sequence

TCAATTAAGGGAAAATTCTTTTTGGATGTTTGCTTCGAGGGAGGGGCTAAGTGCAGCAGATATCAGAGAATGGATGGGTGACTTTCATCATATAAGAAATGTGGCAAAATATGCTGCTCGACTTGGTCAATCTTTTGGCTCATCTAGAAAAACTTTGTGTGTTGAAGAACATGAAATTGAAGTTATTCCTGATGTAGAAGTTGAAAGGAAGAACATTATATATTGCTTCTCTGATGGGATTGGAAAAATATCTAAAACATTAGCTAAGAAAGTTGCTGAAAAATGTGGTTTGATCAATCATACACCATCTGCCTTTCAGATTCGATATGCTGGATACAAAGGTGTTGTAGCTATTGACCCTACGTCAAAAAAGAAATTGTCATTACGAAATAGTATGTTGAAGTATATGTCACTCGATACACAACTTGATGTTTTGTCGTGGAGTAAGTATCAACCATGTTTTCTTAATCGCCAGGTGATAAACCTTTTATCAACTCTTGGAATTGGGGACGATGTTTTTGTAAAAAAACAAAAGGAGGCTATAGATCAACTAGATTCTATTTTGGAAGATCCATCAAGGGCATTAGAAGTGTTGGAGTTGATGTCCCCTGGAGAAATGACTAGTATTTTGAAGGAACTACTTTCGTTTTACATGCCAAATGAAGAACCTTTTCTAAATATGATGTTGCGGACATTTCGAGCAAATAAATTGTTAGATTTAAAGACCAAGTCAAGGATATTTGTTCCGGAGGGAAGGACAATGATTGGTTGCCTGGATGAAACTCGAACACTAGAATATGGGCAAGTGTTTGTTCATTGCTCTGTCCCGCGAAGATCAAGCGAGGGTAATTTTGTAGTTAAGGGTAAAATAGTTGTTGCTAAAAATCCATGTTTACATCCGGGGGACGTGCGTGTGCTCGATGCTGTTGATGTGAAAGCTCTACATCACATGGTGGATTGTGTTGTTTTCCCACAGAAAGGAAAAAGGCCTCACCCAAACGAGTGTTCTGGGAGTGATTTGGATGGTGACTTGTACTTTGCTTGTTGGGATTTGGAGCTAACTTGCATCAAACAAGTCAAACCTATGAACTACGAGCCTGCACCAACTATACAATTGAATCATGATGTCACAATTGAGGAAATTCAAGAATATTTTGCCAATTACATGGTGAATGATGGTATTGGAGCCATTGCAAATGCCCACACTGTCTTTGCAGATAAGAACTCTAAGAAGGCAATGAGTGTTGAATGTATTAAACTTGCAAAATTGTTCTCCATTGCTGTTGACTTCCCAAAGACTGGTGTGCCAGCAAACTTGCCACGCAACCTTCGTGTTCACGAGTATCCTGATTTCATGGACAAGCCCAATAAACCAACTTATGTATCAAATGGTGTTCTTGGGAAGCTTTTTAGAGGAGTGAAAGATGTTTCATCTGATGTCAACACCTTTGAAATTTTCACTAGGGAAGTTGCTACCAAGTACTACGATCCAGACATGGAAGTAGATGGTTTTGAAAAGTATCTAAGAGAAGCTTTTGATTACAAAACTAAGTACGACTTCAAATTGGGGAACCTTATGGATTATTATGGTATTAAAACAGAACCTGAATTAGTTAGTGGAAATGTCTTGAAGATGGCGAAGTCTTTTGATAAAAGGAATGACTTGGAACAAATTACCTTTGCTATGAAGTCTCTAAGAAAGGAGGTCAGGTCTTGGTTCAATGAGAATGAAAGTAAATTTACATACGACGACATTGAAGACGAATACGCAAAAGCATCCGCATGGTACTATGTCACATATCACCCAGATTATTGGGGTTGTTACAATGAAGGTATGCAAAGAGATCATTTTTTGAGTTTTCCATGGTGTGTTGCTGACAAACTTATTCAAATCAAAAGAGATAAGATGACATTGAAGAATTCTTACCCAGTGTCATCATTATTCCACAATTTTGACGGGTGA

Coding sequence (CDS)

TCAATTAAGGGAAAATTCTTTTTGGATGTTTGCTTCGAGGGAGGGGCTAAGTGCAGCAGATATCAGAGAATGGATGGGTGACTTTCATCATATAAGAAATGTGGCAAAATATGCTGCTCGACTTGGTCAATCTTTTGGCTCATCTAGAAAAACTTTGTGTGTTGAAGAACATGAAATTGAAGTTATTCCTGATGTAGAAGTTGAAAGGAAGAACATTATATATTGCTTCTCTGATGGGATTGGAAAAATATCTAAAACATTAGCTAAGAAAGTTGCTGAAAAATGTGGTTTGATCAATCATACACCATCTGCCTTTCAGATTCGATATGCTGGATACAAAGGTGTTGTAGCTATTGACCCTACGTCAAAAAAGAAATTGTCATTACGAAATAGTATGTTGAAGTATATGTCACTCGATACACAACTTGATGTTTTGTCGTGGAGTAAGTATCAACCATGTTTTCTTAATCGCCAGGTGATAAACCTTTTATCAACTCTTGGAATTGGGGACGATGTTTTTGTAAAAAAACAAAAGGAGGCTATAGATCAACTAGATTCTATTTTGGAAGATCCATCAAGGGCATTAGAAGTGTTGGAGTTGATGTCCCCTGGAGAAATGACTAGTATTTTGAAGGAACTACTTTCGTTTTACATGCCAAATGAAGAACCTTTTCTAAATATGATGTTGCGGACATTTCGAGCAAATAAATTGTTAGATTTAAAGACCAAGTCAAGGATATTTGTTCCGGAGGGAAGGACAATGATTGGTTGCCTGGATGAAACTCGAACACTAGAATATGGGCAAGTGTTTGTTCATTGCTCTGTCCCGCGAAGATCAAGCGAGGGTAATTTTGTAGTTAAGGGTAAAATAGTTGTTGCTAAAAATCCATGTTTACATCCGGGGGACGTGCGTGTGCTCGATGCTGTTGATGTGAAAGCTCTACATCACATGGTGGATTGTGTTGTTTTCCCACAGAAAGGAAAAAGGCCTCACCCAAACGAGTGTTCTGGGAGTGATTTGGATGGTGACTTGTACTTTGCTTGTTGGGATTTGGAGCTAACTTGCATCAAACAAGTCAAACCTATGAACTACGAGCCTGCACCAACTATACAATTGAATCATGATGTCACAATTGAGGAAATTCAAGAATATTTTGCCAATTACATGGTGAATGATGGTATTGGAGCCATTGCAAATGCCCACACTGTCTTTGCAGATAAGAACTCTAAGAAGGCAATGAGTGTTGAATGTATTAAACTTGCAAAATTGTTCTCCATTGCTGTTGACTTCCCAAAGACTGGTGTGCCAGCAAACTTGCCACGCAACCTTCGTGTTCACGAGTATCCTGATTTCATGGACAAGCCCAATAAACCAACTTATGTATCAAATGGTGTTCTTGGGAAGCTTTTTAGAGGAGTGAAAGATGTTTCATCTGATGTCAACACCTTTGAAATTTTCACTAGGGAAGTTGCTACCAAGTACTACGATCCAGACATGGAAGTAGATGGTTTTGAAAAGTATCTAAGAGAAGCTTTTGATTACAAAACTAAGTACGACTTCAAATTGGGGAACCTTATGGATTATTATGGTATTAAAACAGAACCTGAATTAGTTAGTGGAAATGTCTTGAAGATGGCGAAGTCTTTTGATAAAAGGAATGACTTGGAACAAATTACCTTTGCTATGAAGTCTCTAAGAAAGGAGGTCAGGTCTTGGTTCAATGAGAATGAAAGTAAATTTACATACGACGACATTGAAGACGAATACGCAAAAGCATCCGCATGGTACTATGTCACATATCACCCAGATTATTGGGGTTGTTACAATGAAGGTATGCAAAGAGATCATTTTTTGAGTTTTCCATGGTGTGTTGCTGACAAACTTATTCAAATCAAAAGAGATAAGATGACATTGAAGAATTCTTACCCAGTGTCATCATTATTCCACAATTTTGACGGGTGA

Protein sequence

QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG*
Homology
[Close]
BLAST of Cucsa.280130 vs. Swiss-Prot
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)

HSP 1 Score: 831.6 bits (2147), Expect = 5.8e-240
Identity = 415/637 (65.15%), Postives = 495/637 (77.71%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENS WMFA  + ++AA IR WMGDF HIRNVAKYAARLGQSF SSR+TL V   EIE
Sbjct: 459  QLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 518

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVE+      Y FSDGIGKIS   A+KVA KCGL   +PSAFQIRY GYKGVVA+DP
Sbjct: 519  VIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 578

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
             S KKLSLR SM K+ S +T+LDVL+WSKYQPC++NRQ+I LLSTLG+ D VF KKQ+E 
Sbjct: 579  NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREV 638

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKEL-LSFYMPNEEPFLNMMLRTFRANKLLD 240
            +D+LD+IL  P  A E L LM+PGE T+ILK L L  Y P+ EPFL+MML+ FRA+KLL+
Sbjct: 639  VDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLE 698

Query: 241  LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLH 300
            L+TK+RIF+  GR+M+GCLDETRTLEYGQV V  S P R     F++ G +VVAKNPCLH
Sbjct: 699  LRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLH 758

Query: 301  PGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQV 360
            PGDVRVL AV+V AL+HMVDCVVFPQKG RPHPNECSGSDLDGD+YF CWD EL   +  
Sbjct: 759  PGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTS 818

Query: 361  KPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIK 420
            +PM+Y P PT  L+HDVTIEE++EYFANY+VND +G IANAHT FADK   KA S  CI+
Sbjct: 819  EPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIE 878

Query: 421  LAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSD 480
            LAK FS AVDFPKTGV A +P++L V EYPDFM+KP+KPTY S  V+GKLFR VK+ +  
Sbjct: 879  LAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPP 938

Query: 481  VNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVS 540
            + + + FT +VA+K YD DMEVDGFE+Y+ EAF  K  YDFKLGNLMDYYGIKTE E++S
Sbjct: 939  LISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILS 998

Query: 541  GNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVT 600
            G +++M+KSF KR D E I  A+++LRKE  S FN +E +      E+E AKASAWY+VT
Sbjct: 999  GGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEE------ENESAKASAWYHVT 1058

Query: 601  YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKM 637
            YH  YWG YNEG+ RDHFLSF WCV DKL++IK+  +
Sbjct: 1059 YHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNL 1088

[Close]
BLAST of Cucsa.280130 vs. Swiss-Prot
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)

HSP 1 Score: 794.7 bits (2051), Expect = 7.9e-229
Identity = 391/651 (60.06%), Postives = 499/651 (76.65%), Query Frame = 1 

Query: 1   QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
           QLR+NS WMFASR+GL+A+DIR WMGDF +IRNVAKYAARLGQSF SS +TL V+++E+E
Sbjct: 94  QLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVE 153

Query: 61  VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            I D++   +++   FSDGIGKIS   A +VA KC L    PSAFQIRY GYKGVVA+DP
Sbjct: 154 EISDIKNGTQHV---FSDGIGKISSAFANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDP 213

Query: 121 TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
           TS+ KLSLR SMLK+ S +  +DVL++SKYQP FLNRQ+I LLSTLG+ D VF +KQ+EA
Sbjct: 214 TSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEA 273

Query: 181 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSF-YMPNEEPFLNMMLRTFRANKLLD 240
           ++QL+ ++ DP  A+E +ELM  GE+T+ +KELL   Y P++EP+L+M+L+TFRA+KLL+
Sbjct: 274 VNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLE 333

Query: 241 LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLH 300
           LKTKSRI +P+GR M+GCLDETRTL+YGQVF+  +     ++  F V GK+V+AKNPCLH
Sbjct: 334 LKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRATSGVNDND-RFTVTGKVVIAKNPCLH 393

Query: 301 PGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQV 360
           PGD+R+L AVDV  LHHM +CVVFPQ+G RPHPNECSGSDLDGD+YF  WD  L   + V
Sbjct: 394 PGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMV 453

Query: 361 KPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIK 420
            PM+Y PAPT  L+HDVTIEE++EYF NY+VN+ +G IANAH VFADK   KA S  CI+
Sbjct: 454 TPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIE 513

Query: 421 LAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSD 480
           LAKLFSIAVDFPKTGVPA +P  L V EYPDFM+K +K TY S GV+GKL+R +K  +  
Sbjct: 514 LAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPH 573

Query: 481 VNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVS 540
           +   + FTREVA + YD DM VDG+E Y+ EA   K +YDFKLGNLMD+YGIK+E E++S
Sbjct: 574 I---KHFTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIIS 633

Query: 541 GNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVT 600
           G +LKMAK+F K++D + I  A++SLRKE RS F+E          +   AKASAWY+VT
Sbjct: 634 GCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVT 693

Query: 601 YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHN 651
           YHP++WGCYNEG +R HF+SFPWC+ +KL++IK+ +  ++   P     HN
Sbjct: 694 YHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRRKFVRKMQPELFSLHN 737

[Close]
BLAST of Cucsa.280130 vs. Swiss-Prot
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 5.4e-161
Identity = 307/653 (47.01%), Postives = 417/653 (63.86%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLR NS WMFAS   L+A  IR WMG F +IR+V+K AAR+GQ F SSR+T  V   ++E
Sbjct: 473  QLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVE 532

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLI-NHTPSAFQIRYAGYKGVVAID 120
            VIPD+E+      Y FSDGIGKIS   AK+VA   GL   + PSAFQIRY GYKGV+AID
Sbjct: 533  VIPDIEITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAID 592

Query: 121  PTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKE 180
            P S   LSLR SM K+ S    L++ SWSK QPC++NR++I+LLSTLGI D++FV  Q++
Sbjct: 593  PMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQD 652

Query: 181  AIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLD 240
             + + + +L +   AL VL  +   E  + +K LL  Y P+ EP+L+M+L+  + N+L D
Sbjct: 653  EMRETEEMLTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTD 712

Query: 241  LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHC---SVPRRSSEGNF---------VVK 300
            ++T+ +I VP+GR +IGCLDET  LEYGQV++     S  ++ S  ++          V 
Sbjct: 713  IRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV 772

Query: 301  GKIVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFA 360
            GK+ + KNPCLHPGD+RVL+A+    L  MVDC+VFPQ+G+RPHPNECSG DLDGDLYF 
Sbjct: 773  GKVAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFI 832

Query: 361  CWDLELTCIKQVKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADK 420
             WD +L   K   PM+Y       ++H VT+EEIQ++F +YM+ND +GAI+ AH + AD+
Sbjct: 833  TWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADR 892

Query: 421  NSKKAMSVECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLG 480
            +  KA S EC++LA L S+AVDF KTG PA +PR LR  EYPDFM++  KP Y+SNGVLG
Sbjct: 893  SPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLG 952

Query: 481  KLFR---GVKDVSSDVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGN 540
            KL+R   G  + S D       + +  +  YDPD+EV G +++L+ A +Y   Y+ KL  
Sbjct: 953  KLYRSAMGHMEKSGDSGALSSSSAQ-PSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTT 1012

Query: 541  LMDYYGIKTEPELVSGNV---LKMAKSFDKR--NDLEQITFAMKSLRKEVRSWFNENESK 600
            LM+YY  + E E+++GN+   +   K  +KR     ++I  A+ +L +E R W   +  +
Sbjct: 1013 LMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKE 1072

Query: 601  FTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIK 633
                  ED    ASAWY VTYHPD         +   F SFPW   D L+ IK
Sbjct: 1073 ------EDASRMASAWYRVTYHPD-------RRRGKRFWSFPWIACDNLLAIK 1111

[Close]
BLAST of Cucsa.280130 vs. Swiss-Prot
Match: RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 5.9e-160
Identity = 305/655 (46.56%), Postives = 420/655 (64.12%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLR NS WMFAS E + A DIREWMG F  IR+++K AAR+GQ F +SR+TL V   ++E
Sbjct: 478  QLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVE 537

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
             IPD+EV      YCFSDGIGKIS   AK+VA+KCGL +H PSAFQIRY GYKGV+A+D 
Sbjct: 538  QIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDR 597

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            +S +KLSLR+SMLK+ S +  L+V  W++  PCFLNR++I LLSTLGI D +F   Q   
Sbjct: 598  SSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVH 657

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSIL-KELLSFYMPNEEPFLNMMLRTFRANKLLD 240
            +  L ++LED   AL VL+ +S     ++L K LL  Y P+ EP+L+MMLR    ++L +
Sbjct: 658  LSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSE 717

Query: 241  LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVP------------RRSSEGNFVVK 300
            LK++ RI VP+GR +IGC+DE   LEYGQV+V  ++             R+  E   VV 
Sbjct: 718  LKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVI 777

Query: 301  GKIVVAKNPCLHPGDVRVLDAVDVKALHHM--VDCVVFPQKGKRPHPNECSGSDLDGDLY 360
            GK+VV KNPCLHPGD+RVLDA+          +DC++FPQKG+RPHPNECSG DLDGD +
Sbjct: 778  GKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQF 837

Query: 361  FACWDLELTCIKQVKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFA 420
            F  WD ++   +   PM+Y  +    ++HDVT+EEI ++F +YM++D +G I+ AH V A
Sbjct: 838  FVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHA 897

Query: 421  DKNSKKAMSVECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGV 480
            D++ +KA S +C++LA L S AVDF KTG PA +P  L+  E+PDF+++  KPTY+S  V
Sbjct: 898  DRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESV 957

Query: 481  LGKLFRGVKDVSSDVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNL 540
             GKL+R VK   S +   +       T  YD  +E  GFE ++  A  ++  Y  KL +L
Sbjct: 958  FGKLYRAVK---SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSL 1017

Query: 541  MDYYGIKTEPELVSGNVLKMAKSFDKRND------LEQITFAMKSLRKEVRSWFNENESK 600
            M YYG   E E+++G +LK  + +  R++       ++IT ++K L KE   WF +    
Sbjct: 1018 MIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK---- 1077

Query: 601  FTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRD 635
             + +D + +   ASAWYYVTY+P      N   ++  FLSFPW V D L+ IK +
Sbjct: 1078 -SCEDEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1116

[Close]
BLAST of Cucsa.280130 vs. Swiss-Prot
Match: RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 4.7e-133
Identity = 284/683 (41.58%), Postives = 400/683 (58.57%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLR+ S W FA       +DI+ WMG F   +NVAK AAR+G  F S+  T+ V  HE++
Sbjct: 513  QLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVD 572

Query: 61   V-IPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGL-INHTPSAFQIRYAGYKGVVAI 120
              +PD+E       Y FSDGIG I+  LA +V EK  L ++++P A+QIRYAG+KGVVA 
Sbjct: 573  TEVPDIERNG----YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVAR 632

Query: 121  DPTSKK--KLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKK 180
             P+     +L+LR+SM K+ S  T L++ SW+++QP FLNRQ+I LLS LG+ D++F   
Sbjct: 633  WPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDM 692

Query: 181  QKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANK 240
            Q+  + +L+ IL+D   A EVL      +  +    L + + P  EP L  ML + R  +
Sbjct: 693  QESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQ 752

Query: 241  LLDLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVP-------------RRSSEGN 300
            L  L+ KSRIFV  GR ++GCLDE   LE+GQ F+  S P             + +    
Sbjct: 753  LWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDL 812

Query: 301  FVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGD 360
             VVKG + +AKNPCLHPGDVR+L+AVDV  LHHM DC++FPQKG RPH NE SGSDLDGD
Sbjct: 813  EVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGD 872

Query: 361  LYFACWDLEL--TCIKQVKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAH 420
            LYF  WD +L     K    M+Y+ A    L   V  ++I ++FA  + N+ +G I NAH
Sbjct: 873  LYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAH 932

Query: 421  TVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYV 480
             V AD++   AM  EC+ LA+L + AVDFPKTG   ++P +L+   YPDFM K +  TY 
Sbjct: 933  VVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYK 992

Query: 481  SNGVLGKLFRGVKDV-SSDVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDF 540
            SN +LG+L+R VK+V   D       + + +   YD  +E+ GFE  + EA+ +K  YD 
Sbjct: 993  SNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDG 1052

Query: 541  KLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRND--LEQITFAMKSLRKEVRSWFNENES 600
            +L  L+  Y ++ E E+V+G++  M K   K+     E++  +  SL+KE R  F E   
Sbjct: 1053 QLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIP 1112

Query: 601  KFTYDDIEDE------YAKASAWYYVTYHPDYWGCYNEGMQRDH-----FLSFPWCVADK 648
               ++++ +E        KASAWY+VTYHP++     E    D       LSF W  AD 
Sbjct: 1113 --DHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADY 1172

[Close]
BLAST of Cucsa.280130 vs. TrEMBL
Match: A0A0A0KRH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G564290 PE=4 SV=1)

HSP 1 Score: 1336.2 bits (3457), Expect = 0.0e+00
Identity = 652/653 (99.85%), Postives = 653/653 (100.00%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE
Sbjct: 463  QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 522

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVEVERKNI+YCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP
Sbjct: 523  VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 582

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA
Sbjct: 583  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 642

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
            IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL
Sbjct: 643  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 702

Query: 241  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
            KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP
Sbjct: 703  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 762

Query: 301  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
            GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK
Sbjct: 763  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 822

Query: 361  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
            PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL
Sbjct: 823  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 882

Query: 421  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
            AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 883  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 942

Query: 481  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
            NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 943  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1002

Query: 541  NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 600
            NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY
Sbjct: 1003 NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 1062

Query: 601  HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 654
            HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG
Sbjct: 1063 HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cucsa.280130 vs. TrEMBL
Match: E5GB63_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 608/654 (92.97%), Postives = 634/654 (96.94%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENSFWMFASR+GLSAADIREWMGDF  IRNVAKYAARLGQSFGSSRKTLCV+EHEIE
Sbjct: 480  QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 539

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVEVERKNI+YCFSDGIGKISKTLAKKVA+KCGL  HTPSAFQIRYAGYKGVVAIDP
Sbjct: 540  VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 599

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TS+KKLSLR SMLKYMSLDTQLDVL WSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA
Sbjct: 600  TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 659

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
            IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMML TFRANKLLDL
Sbjct: 660  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 719

Query: 241  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
            KTKSRIFVP GRTM+GCLDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHP
Sbjct: 720  KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 779

Query: 301  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
            GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIKQVK
Sbjct: 780  GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 839

Query: 361  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
            PM+YEPAP+IQL+HDVTIEE+Q+YFANYMVNDG+GAIANAHTVFADKNSKKAMS ECIKL
Sbjct: 840  PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 899

Query: 421  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
            AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 900  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 959

Query: 481  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
            NTFEIFT+EVATK YDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 960  NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1019

Query: 541  NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIE-DEYAKASAWYYVT 600
            N+LKMAKSFDKRNDLEQI FAMKSLRKEVRSWFNENESK+TY+DIE DEYA+ASAWY VT
Sbjct: 1020 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDIEDDEYARASAWYCVT 1079

Query: 601  YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 654
            YHPDYWG YNEG QRDHFLSFPWCVADKLIQIKR+KM+L+NS P+SSL +NFDG
Sbjct: 1080 YHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDG 1133

[Close]
BLAST of Cucsa.280130 vs. TrEMBL
Match: A0A0S1YCZ4_CUCSA (RNA-dependent RNA polymerase 1c OS=Cucumis sativus GN=RDR1c PE=2 SV=1)

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 602/649 (92.76%), Postives = 629/649 (96.92%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE
Sbjct: 463  QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 522

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVEVERKNI+YCFSDGIGKISKTLAKKVAEKCGL +HTPSAFQIRYAGYKGVVAIDP
Sbjct: 523  VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDP 582

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TS+KKLSLR SMLKYMSLDTQLDVL WSKYQPCFLNRQVINLLSTLGI DDVFVKKQKEA
Sbjct: 583  TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEA 642

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
            IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPN+EPFLNMMLRTFRA+KLLDL
Sbjct: 643  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDL 702

Query: 241  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
            +TKSRIFVP+GRTM+GCLDET+TLEYGQVFVHCS+P RSSEGNFVVKGK+VVAKNPCLHP
Sbjct: 703  RTKSRIFVPKGRTMMGCLDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHP 762

Query: 301  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
            GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIKQVK
Sbjct: 763  GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVK 822

Query: 361  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
            PM+Y+PAPTIQL+HDVTIEE+QEYFANYMVNDG+GAIANAHTVFADKNSKKAMS ECIKL
Sbjct: 823  PMSYKPAPTIQLDHDVTIEEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 882

Query: 421  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
            AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNK TYVSNGVLGKLFRGVKDVSSDV
Sbjct: 883  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDV 942

Query: 481  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
            + FEIFTREVATK YDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 943  SAFEIFTREVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1002

Query: 541  NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 600
            N+LKMAKSFDKR DLEQI FAMKSLRKEVR WFNENESK TYDDI+DEYA+ASAWY VTY
Sbjct: 1003 NILKMAKSFDKRKDLEQIAFAMKSLRKEVRFWFNENESKSTYDDIQDEYARASAWYCVTY 1062

Query: 601  HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFH 650
            HPDYWGCYNEG +RDHFLSFPWCVADKLIQIKR+KM+++NS P SSL H
Sbjct: 1063 HPDYWGCYNEGTKRDHFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111

[Close]
BLAST of Cucsa.280130 vs. TrEMBL
Match: A0A0A0KRC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544050 PE=4 SV=1)

HSP 1 Score: 1233.4 bits (3190), Expect = 0.0e+00
Identity = 597/641 (93.14%), Postives = 623/641 (97.19%), Query Frame = 1 

Query: 9   MFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVE 68
           MFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVE
Sbjct: 1   MFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVE 60

Query: 69  RKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSL 128
           RKNI+YCFSDGIGKISKTLAKKVAEKCGL +HTPSAFQIRYAGYKGVVAIDPTS+KKLSL
Sbjct: 61  RKNIMYCFSDGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSL 120

Query: 129 RNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSIL 188
           R SMLKYMSLDTQLDVL WSKYQPCFLNRQVINLLSTLGI DDVFVKKQKEAIDQLDSIL
Sbjct: 121 RKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSIL 180

Query: 189 EDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFV 248
           EDPSRALEVLELMSPGEMTSILKELLSFYMPN+EPFLNMMLRTFRA+KLLDL+TKSRIFV
Sbjct: 181 EDPSRALEVLELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFV 240

Query: 249 PEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDA 308
           P+GRTM+GCLDET+TLEYGQVFVHCS+P RSSEGNFVVKGK+VVAKNPCLHPGDVR+LDA
Sbjct: 241 PKGRTMMGCLDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDA 300

Query: 309 VDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAP 368
           +DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIKQVKPM+Y+PAP
Sbjct: 301 IDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAP 360

Query: 369 TIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAV 428
           TIQL+HDVTIEE+QEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAV
Sbjct: 361 TIQLDHDVTIEEVQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAV 420

Query: 429 DFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTR 488
           DFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV+ FEIFTR
Sbjct: 421 DFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVSAFEIFTR 480

Query: 489 EVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKS 548
           EVATK YDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGN+LKMAKS
Sbjct: 481 EVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKS 540

Query: 549 FDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCY 608
           FDKR DLEQI FAMKSLRKEVR WFNENESK TYDDI+DEYA+ASAWY VTYHPDYWGCY
Sbjct: 541 FDKRKDLEQIAFAMKSLRKEVRFWFNENESKSTYDDIQDEYARASAWYCVTYHPDYWGCY 600

Query: 609 NEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFH 650
           NEG +RDHFLSFPWCVADKLIQIKR+KM+++NS P SSL H
Sbjct: 601 NEGTKRDHFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 641

[Close]
BLAST of Cucsa.280130 vs. TrEMBL
Match: B3SND7_GOSHI (RNA-dependent RNA polymerase OS=Gossypium hirsutum PE=4 SV=1)

HSP 1 Score: 895.6 bits (2313), Expect = 3.6e-257
Identity = 437/652 (67.02%), Postives = 527/652 (80.83%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENS WMFASR+GL+AADIR WMG+F  IRNVAKYAARLGQSF SS +TL V + EI 
Sbjct: 455  QLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEIN 514

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            +IPD+E+ +  I Y FSDGIGKIS   AKKVA KC L   TPSAFQIR  G+KGVVAIDP
Sbjct: 515  LIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TS  KLSLR SM KY S +T+LDVL+WSKYQPCFLNRQ+I LLSTLG+ D  F KKQ+E 
Sbjct: 575  TSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKKQREV 634

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKE-LLSFYMPNEEPFLNMMLRTFRANKLLD 240
            +DQL+++L DP  A E LELMSPGE T+ILKE LL  Y P+ EPFL+MML TFRA+KLL+
Sbjct: 635  VDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRASKLLE 694

Query: 241  LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLH 300
            L+TK+RIFV +GR+M+GCLDETRTL YGQVFV  S  R  SE  F+V+GK++VAKNPCLH
Sbjct: 695  LRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQFSGSR--SERRFIVQGKVIVAKNPCLH 754

Query: 301  PGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQV 360
            PGDVRVL AV+V  LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YF CWD EL   KQ+
Sbjct: 755  PGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQI 814

Query: 361  KPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIK 420
             PM+Y PA T +L+H+VTIEEI+EYF NY+VND +G I+NAHT FAD+   KAMS  C++
Sbjct: 815  DPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLE 874

Query: 421  LAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSD 480
            LAKLFSIAVDFPKTGVPA +P+ LRV EYPDFM+KP+KP+Y S+ V+GKLFR VK+++ +
Sbjct: 875  LAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPN 934

Query: 481  VNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVS 540
              + +  TRE   ++YDPDMEV+GFE Y+ +AF +K+KYD+KLGNLMDYYG+KTE E++ 
Sbjct: 935  ECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILG 994

Query: 541  GNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVT 600
            G ++KM++SF K+ D E I+ A++SLRKE RSWFNE  S+   ++I+D YAKASAWYYVT
Sbjct: 995  GGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELD-EEIDDAYAKASAWYYVT 1054

Query: 601  YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNF 652
            YHP YWG YNEGM RDHFLSFPWCV DKLIQIK++K  ++ +  +SSL H F
Sbjct: 1055 YHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRF 1103

[Close]
BLAST of Cucsa.280130 vs. TAIR10
Match: AT1G14790.1 (AT1G14790.1 RNA-dependent RNA polymerase 1)

HSP 1 Score: 831.6 bits (2147), Expect = 3.3e-241
Identity = 415/637 (65.15%), Postives = 495/637 (77.71%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENS WMFA  + ++AA IR WMGDF HIRNVAKYAARLGQSF SSR+TL V   EIE
Sbjct: 459  QLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 518

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVE+      Y FSDGIGKIS   A+KVA KCGL   +PSAFQIRY GYKGVVA+DP
Sbjct: 519  VIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 578

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
             S KKLSLR SM K+ S +T+LDVL+WSKYQPC++NRQ+I LLSTLG+ D VF KKQ+E 
Sbjct: 579  NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREV 638

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKEL-LSFYMPNEEPFLNMMLRTFRANKLLD 240
            +D+LD+IL  P  A E L LM+PGE T+ILK L L  Y P+ EPFL+MML+ FRA+KLL+
Sbjct: 639  VDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLE 698

Query: 241  LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLH 300
            L+TK+RIF+  GR+M+GCLDETRTLEYGQV V  S P R     F++ G +VVAKNPCLH
Sbjct: 699  LRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLH 758

Query: 301  PGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQV 360
            PGDVRVL AV+V AL+HMVDCVVFPQKG RPHPNECSGSDLDGD+YF CWD EL   +  
Sbjct: 759  PGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTS 818

Query: 361  KPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIK 420
            +PM+Y P PT  L+HDVTIEE++EYFANY+VND +G IANAHT FADK   KA S  CI+
Sbjct: 819  EPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIE 878

Query: 421  LAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSD 480
            LAK FS AVDFPKTGV A +P++L V EYPDFM+KP+KPTY S  V+GKLFR VK+ +  
Sbjct: 879  LAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPP 938

Query: 481  VNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVS 540
            + + + FT +VA+K YD DMEVDGFE+Y+ EAF  K  YDFKLGNLMDYYGIKTE E++S
Sbjct: 939  LISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILS 998

Query: 541  GNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVT 600
            G +++M+KSF KR D E I  A+++LRKE  S FN +E +      E+E AKASAWY+VT
Sbjct: 999  GGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEE------ENESAKASAWYHVT 1058

Query: 601  YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKM 637
            YH  YWG YNEG+ RDHFLSF WCV DKL++IK+  +
Sbjct: 1059 YHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNL 1088

[Close]
BLAST of Cucsa.280130 vs. TAIR10
Match: AT4G11130.1 (AT4G11130.1 RNA-dependent RNA polymerase 2)

HSP 1 Score: 565.8 bits (1457), Expect = 3.4e-161
Identity = 305/655 (46.56%), Postives = 420/655 (64.12%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLR NS WMFAS E + A DIREWMG F  IR+++K AAR+GQ F +SR+TL V   ++E
Sbjct: 478  QLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVE 537

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
             IPD+EV      YCFSDGIGKIS   AK+VA+KCGL +H PSAFQIRY GYKGV+A+D 
Sbjct: 538  QIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDR 597

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            +S +KLSLR+SMLK+ S +  L+V  W++  PCFLNR++I LLSTLGI D +F   Q   
Sbjct: 598  SSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVH 657

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSIL-KELLSFYMPNEEPFLNMMLRTFRANKLLD 240
            +  L ++LED   AL VL+ +S     ++L K LL  Y P+ EP+L+MMLR    ++L +
Sbjct: 658  LSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSE 717

Query: 241  LKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVP------------RRSSEGNFVVK 300
            LK++ RI VP+GR +IGC+DE   LEYGQV+V  ++             R+  E   VV 
Sbjct: 718  LKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVI 777

Query: 301  GKIVVAKNPCLHPGDVRVLDAVDVKALHHM--VDCVVFPQKGKRPHPNECSGSDLDGDLY 360
            GK+VV KNPCLHPGD+RVLDA+          +DC++FPQKG+RPHPNECSG DLDGD +
Sbjct: 778  GKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQF 837

Query: 361  FACWDLELTCIKQVKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFA 420
            F  WD ++   +   PM+Y  +    ++HDVT+EEI ++F +YM++D +G I+ AH V A
Sbjct: 838  FVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHA 897

Query: 421  DKNSKKAMSVECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGV 480
            D++ +KA S +C++LA L S AVDF KTG PA +P  L+  E+PDF+++  KPTY+S  V
Sbjct: 898  DRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESV 957

Query: 481  LGKLFRGVKDVSSDVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNL 540
             GKL+R VK   S +   +       T  YD  +E  GFE ++  A  ++  Y  KL +L
Sbjct: 958  FGKLYRAVK---SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSL 1017

Query: 541  MDYYGIKTEPELVSGNVLKMAKSFDKRND------LEQITFAMKSLRKEVRSWFNENESK 600
            M YYG   E E+++G +LK  + +  R++       ++IT ++K L KE   WF +    
Sbjct: 1018 MIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK---- 1077

Query: 601  FTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRD 635
             + +D + +   ASAWYYVTY+P      N   ++  FLSFPW V D L+ IK +
Sbjct: 1078 -SCEDEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1116

[Close]
BLAST of Cucsa.280130 vs. TAIR10
Match: AT3G49500.1 (AT3G49500.1 RNA-dependent RNA polymerase 6)

HSP 1 Score: 476.5 bits (1225), Expect = 2.7e-134
Identity = 284/683 (41.58%), Postives = 400/683 (58.57%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLR+ S W FA       +DI+ WMG F   +NVAK AAR+G  F S+  T+ V  HE++
Sbjct: 513  QLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVD 572

Query: 61   V-IPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGL-INHTPSAFQIRYAGYKGVVAI 120
              +PD+E       Y FSDGIG I+  LA +V EK  L ++++P A+QIRYAG+KGVVA 
Sbjct: 573  TEVPDIERNG----YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVAR 632

Query: 121  DPTSKK--KLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKK 180
             P+     +L+LR+SM K+ S  T L++ SW+++QP FLNRQ+I LLS LG+ D++F   
Sbjct: 633  WPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDM 692

Query: 181  QKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANK 240
            Q+  + +L+ IL+D   A EVL      +  +    L + + P  EP L  ML + R  +
Sbjct: 693  QESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQ 752

Query: 241  LLDLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVP-------------RRSSEGN 300
            L  L+ KSRIFV  GR ++GCLDE   LE+GQ F+  S P             + +    
Sbjct: 753  LWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDL 812

Query: 301  FVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGD 360
             VVKG + +AKNPCLHPGDVR+L+AVDV  LHHM DC++FPQKG RPH NE SGSDLDGD
Sbjct: 813  EVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGD 872

Query: 361  LYFACWDLEL--TCIKQVKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAH 420
            LYF  WD +L     K    M+Y+ A    L   V  ++I ++FA  + N+ +G I NAH
Sbjct: 873  LYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAH 932

Query: 421  TVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYV 480
             V AD++   AM  EC+ LA+L + AVDFPKTG   ++P +L+   YPDFM K +  TY 
Sbjct: 933  VVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYK 992

Query: 481  SNGVLGKLFRGVKDV-SSDVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDF 540
            SN +LG+L+R VK+V   D       + + +   YD  +E+ GFE  + EA+ +K  YD 
Sbjct: 993  SNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDG 1052

Query: 541  KLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRND--LEQITFAMKSLRKEVRSWFNENES 600
            +L  L+  Y ++ E E+V+G++  M K   K+     E++  +  SL+KE R  F E   
Sbjct: 1053 QLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIP 1112

Query: 601  KFTYDDIEDE------YAKASAWYYVTYHPDYWGCYNEGMQRDH-----FLSFPWCVADK 648
               ++++ +E        KASAWY+VTYHP++     E    D       LSF W  AD 
Sbjct: 1113 --DHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADY 1172

[Close]
BLAST of Cucsa.280130 vs. TAIR10
Match: AT2G19930.1 (AT2G19930.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 112.8 bits (281), Expect = 7.8e-25
Identity = 146/554 (26.35%), Postives = 238/554 (42.96%), Query Frame = 1 

Query: 15  GLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEI--EVIPDV------- 74
           G S  + R      H    +A Y AR      S  KTL V+   I  + I D+       
Sbjct: 327 GKSIYEARMHFMHVHRAPTLANYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDG 386

Query: 75  -EVERKNIIYCF-SDGIGKISKTLAK---------------KVAEKCGLINHTPSAFQIR 134
            +V  KN   C  SDG G IS+ LA+                + E C         F++ 
Sbjct: 387 KDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMF 446

Query: 135 YAGY--KGVVAIDPT-SKKKLSLRNSMLKY--------MSLDTQLDVLSWSKY-QPCFLN 194
           Y GY  KG   ++     + + +R SM+K          S    L+V++ S   +   L+
Sbjct: 447 YDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLS 506

Query: 195 RQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSI-LKELLS 254
           + ++ LLS  GI ++ F+      +++  SI  +   AL     ++ GEM      +++ 
Sbjct: 507 KNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAA--LNYGEMDDQNAAQMIL 566

Query: 255 FYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSV 314
             +P +EP L   L      +  DLK   ++ V E   ++G +D T  L+  +V V    
Sbjct: 567 VGIPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILES 626

Query: 315 PRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMVD----CVVFPQKGKRPH 374
            +        + G+++V +NP LH GD+ +L A  VKAL   V      V FPQKG R  
Sbjct: 627 GQ--------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSL 686

Query: 375 PNECSGSDLDGDLYFACWDLELTCIKQVKP------------MNYEPAPTIQLNHDVTIE 434
            +E +G D DGD+YF   + EL  ++  KP             N   AP+ QL+ +   E
Sbjct: 687 GDEIAGGDFDGDMYFISRNPEL--LENFKPSEPWVSLTPPSKSNSGRAPS-QLSPEELEE 746

Query: 435 EIQEYF--ANYMVNDGIGAIANAHTVFADK---------NSKKAMSVECIKLAKLFSIAV 494
           E+ E F  A +  ++ IG  A++     D+           K  M  + ++L  ++  A+
Sbjct: 747 ELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDAL 806

Query: 495 DFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVK-------DVSSDVN 496
           D PK G    LP  L+   +P +M++  K  + S  +LG +F  VK         SS+++
Sbjct: 807 DAPKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVKSQTTEEPSPSSEIS 863

[Close]
BLAST of Cucsa.280130 vs. TAIR10
Match: AT2G19910.1 (AT2G19910.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-22
Identity = 117/455 (25.71%), Postives = 197/455 (43.30%), Query Frame = 1 

Query: 84  SKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKK----KLSLRNSMLKY---- 143
           SK L  +    CG        F+I Y GY  V     T+KK     + +R SM+K     
Sbjct: 434 SKNLNFEGQGPCGQEPPLLIQFRIFYNGY-AVKGTFLTNKKLPPRTVQVRPSMIKVYEDR 493

Query: 144 ----MSLDTQLDVLSWSKY-QPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILED 203
               +S    L+V++ S   +   L+R ++ LLS  G+ +D F+   +  +++  +I   
Sbjct: 494 TLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYS 553

Query: 204 PSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPE 263
              A +        + T+   +++   +P +EP+L   L      +   LK   R  + E
Sbjct: 554 ERAAFKAAINYGDDQYTA---DMILVGIPLDEPYLKDRLSYLLKTERNALKA-GRFPIDE 613

Query: 264 GRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVD 323
              ++G +D T  L+  ++   C +          + G ++V +NP LH GD+ VL A  
Sbjct: 614 SYYIMGTVDPTGELKENEI---CVILHSGQ-----ISGDVLVYRNPGLHFGDIHVLKATY 673

Query: 324 VKALHHMVD----CVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELT--------CIKQ 383
           VKAL   V      V FPQKG R   +E +G D DGD+YF   + +L          +  
Sbjct: 674 VKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSS 733

Query: 384 VKPMN-YEPAPTIQLNHDVTIEEIQEYF--ANYMVNDGIGAIANA-------HTVFADKN 443
            KP   Y      +L+ +   EE+ + F  A +   D IG  A+             D++
Sbjct: 734 SKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDES 793

Query: 444 SKKAMSVE--CIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVL 502
           +K+    +   +KL  ++  A+D PK G   +LP +L +  +P +M++  K  + S  +L
Sbjct: 794 AKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSIL 853

[Close]
BLAST of Cucsa.280130 vs. NCBI nr
Match: gi|778703938|ref|XP_011655453.1| (PREDICTED: probable RNA-dependent RNA polymerase 1 [Cucumis sativus])

HSP 1 Score: 1336.2 bits (3457), Expect = 0.0e+00
Identity = 652/653 (99.85%), Postives = 653/653 (100.00%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE
Sbjct: 463  QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 522

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVEVERKNI+YCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP
Sbjct: 523  VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 582

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA
Sbjct: 583  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 642

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
            IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL
Sbjct: 643  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 702

Query: 241  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
            KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP
Sbjct: 703  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 762

Query: 301  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
            GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK
Sbjct: 763  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 822

Query: 361  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
            PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL
Sbjct: 823  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 882

Query: 421  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
            AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 883  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 942

Query: 481  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
            NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 943  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1002

Query: 541  NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 600
            NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY
Sbjct: 1003 NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 1062

Query: 601  HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 654
            HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG
Sbjct: 1063 HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cucsa.280130 vs. NCBI nr
Match: gi|700196297|gb|KGN51474.1| (hypothetical protein Csa_5G564290 [Cucumis sativus])

HSP 1 Score: 1336.2 bits (3457), Expect = 0.0e+00
Identity = 652/653 (99.85%), Postives = 653/653 (100.00%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE
Sbjct: 463  QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 522

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVEVERKNI+YCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP
Sbjct: 523  VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 582

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA
Sbjct: 583  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 642

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
            IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL
Sbjct: 643  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 702

Query: 241  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
            KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP
Sbjct: 703  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 762

Query: 301  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
            GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK
Sbjct: 763  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 822

Query: 361  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
            PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL
Sbjct: 823  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 882

Query: 421  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
            AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 883  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 942

Query: 481  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
            NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 943  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1002

Query: 541  NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 600
            NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY
Sbjct: 1003 NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 1062

Query: 601  HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 654
            HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG
Sbjct: 1063 HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cucsa.280130 vs. NCBI nr
Match: gi|778708597|ref|XP_011656241.1| (PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis sativus])

HSP 1 Score: 1251.1 bits (3236), Expect = 0.0e+00
Identity = 605/649 (93.22%), Postives = 631/649 (97.23%), Query Frame = 1 

Query: 1   QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
           QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE
Sbjct: 66  QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 125

Query: 61  VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
           VIPDVEVERKNI+YCFSDGIGKISKTLAKKVAEKCGL +HTPSAFQIRYAGYKGVVAIDP
Sbjct: 126 VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDP 185

Query: 121 TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
           TS+KKLSLR SMLKYMSLDTQLDVL WSKYQPCFLNRQVINLLSTLGI DDVFVKKQKEA
Sbjct: 186 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEA 245

Query: 181 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
           IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPN+EPFLNMMLRTFRA+KLLDL
Sbjct: 246 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDL 305

Query: 241 KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
           +TKSRIFVP+GRTM+GCLDET+TLEYGQVFVHCS+P RSSEGNFVVKGK+VVAKNPCLHP
Sbjct: 306 RTKSRIFVPKGRTMMGCLDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHP 365

Query: 301 GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
           GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIKQVK
Sbjct: 366 GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVK 425

Query: 361 PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
           PM+Y+PAPTIQL+HDVTIEE+QEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL
Sbjct: 426 PMSYKPAPTIQLDHDVTIEEVQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 485

Query: 421 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
           AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 486 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 545

Query: 481 NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
           + FEIFTREVATK YDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 546 SAFEIFTREVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 605

Query: 541 NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTY 600
           N+LKMAKSFDKR DLEQI FAMKSLRKEVR WFNENESK TYDDI+DEYA+ASAWY VTY
Sbjct: 606 NILKMAKSFDKRKDLEQIAFAMKSLRKEVRFWFNENESKSTYDDIQDEYARASAWYCVTY 665

Query: 601 HPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFH 650
           HPDYWGCYNEG +RDHFLSFPWCVADKLIQIKR+KM+++NS P SSL H
Sbjct: 666 HPDYWGCYNEGTKRDHFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 714

[Close]
BLAST of Cucsa.280130 vs. NCBI nr
Match: gi|659074597|ref|XP_008437690.1| (PREDICTED: probable RNA-dependent RNA polymerase 1, partial [Cucumis melo])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 608/654 (92.97%), Postives = 634/654 (96.94%), Query Frame = 1 

Query: 1   QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
           QLRENSFWMFASR+GLSAADIREWMGDF  IRNVAKYAARLGQSFGSSRKTLCV+EHEIE
Sbjct: 282 QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 341

Query: 61  VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
           VIPDVEVERKNI+YCFSDGIGKISKTLAKKVA+KCGL  HTPSAFQIRYAGYKGVVAIDP
Sbjct: 342 VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 401

Query: 121 TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
           TS+KKLSLR SMLKYMSLDTQLDVL WSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA
Sbjct: 402 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 461

Query: 181 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
           IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMML TFRANKLLDL
Sbjct: 462 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 521

Query: 241 KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
           KTKSRIFVP GRTM+GCLDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHP
Sbjct: 522 KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 581

Query: 301 GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
           GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIKQVK
Sbjct: 582 GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 641

Query: 361 PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
           PM+YEPAP+IQL+HDVTIEE+Q+YFANYMVNDG+GAIANAHTVFADKNSKKAMS ECIKL
Sbjct: 642 PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 701

Query: 421 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
           AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 702 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 761

Query: 481 NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
           NTFEIFT+EVATK YDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 762 NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 821

Query: 541 NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIE-DEYAKASAWYYVT 600
           N+LKMAKSFDKRNDLEQI FAMKSLRKEVRSWFNENESK+TY+DIE DEYA+ASAWY VT
Sbjct: 822 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDIEDDEYARASAWYCVT 881

Query: 601 YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 654
           YHPDYWG YNEG QRDHFLSFPWCVADKLIQIKR+KM+L+NS P+SSL +NFDG
Sbjct: 882 YHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDG 935

[Close]
BLAST of Cucsa.280130 vs. NCBI nr
Match: gi|307135834|gb|ADN33705.1| (RNA-dependent RNA polymerase [Cucumis melo subsp. melo])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 608/654 (92.97%), Postives = 634/654 (96.94%), Query Frame = 1 

Query: 1    QLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIE 60
            QLRENSFWMFASR+GLSAADIREWMGDF  IRNVAKYAARLGQSFGSSRKTLCV+EHEIE
Sbjct: 480  QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 539

Query: 61   VIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDP 120
            VIPDVEVERKNI+YCFSDGIGKISKTLAKKVA+KCGL  HTPSAFQIRYAGYKGVVAIDP
Sbjct: 540  VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 599

Query: 121  TSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 180
            TS+KKLSLR SMLKYMSLDTQLDVL WSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA
Sbjct: 600  TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 659

Query: 181  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDL 240
            IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMML TFRANKLLDL
Sbjct: 660  IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 719

Query: 241  KTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHP 300
            KTKSRIFVP GRTM+GCLDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHP
Sbjct: 720  KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 779

Query: 301  GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVK 360
            GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIKQVK
Sbjct: 780  GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 839

Query: 361  PMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKL 420
            PM+YEPAP+IQL+HDVTIEE+Q+YFANYMVNDG+GAIANAHTVFADKNSKKAMS ECIKL
Sbjct: 840  PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 899

Query: 421  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDV 480
            AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 900  AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 959

Query: 481  NTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 540
            NTFEIFT+EVATK YDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 960  NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1019

Query: 541  NVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYDDIE-DEYAKASAWYYVT 600
            N+LKMAKSFDKRNDLEQI FAMKSLRKEVRSWFNENESK+TY+DIE DEYA+ASAWY VT
Sbjct: 1020 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDIEDDEYARASAWYCVT 1079

Query: 601  YHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 654
            YHPDYWG YNEG QRDHFLSFPWCVADKLIQIKR+KM+L+NS P+SSL +NFDG
Sbjct: 1080 YHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDG 1133

The following BLAST results are available for this feature:
BLAST of Cucsa.280130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RDR1_ARATH5.8e-24065.15RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1[more]
RDR1_ORYSJ7.9e-22960.06Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 ... [more]
RDR2_ORYSJ5.4e-16147.01Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 ... [more]
RDR2_ARATH5.9e-16046.56RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1[more]
RDR6_ARATH4.7e-13341.58RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1[more]
BLAST of Cucsa.280130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRH3_CUCSA0.0e+0099.85Uncharacterized protein OS=Cucumis sativus GN=Csa_5G564290 PE=4 SV=1[more]
E5GB63_CUCME0.0e+0092.97RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0S1YCZ4_CUCSA0.0e+0092.76RNA-dependent RNA polymerase 1c OS=Cucumis sativus GN=RDR1c PE=2 SV=1[more]
A0A0A0KRC3_CUCSA0.0e+0093.14Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544050 PE=4 SV=1[more]
B3SND7_GOSHI3.6e-25767.02RNA-dependent RNA polymerase OS=Gossypium hirsutum PE=4 SV=1[more]
BLAST of Cucsa.280130 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14790.13.3e-24165.15 RNA-dependent RNA polymerase 1[more]
AT4G11130.13.4e-16146.56 RNA-dependent RNA polymerase 2[more]
AT3G49500.12.7e-13441.58 RNA-dependent RNA polymerase 6[more]
AT2G19930.17.8e-2526.35 RNA-dependent RNA polymerase family protein[more]
AT2G19910.11.6e-2225.71 RNA-dependent RNA polymerase family protein[more]
BLAST of Cucsa.280130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703938|ref|XP_011655453.1|0.0e+0099.85PREDICTED: probable RNA-dependent RNA polymerase 1 [Cucumis sativus][more]
gi|700196297|gb|KGN51474.1|0.0e+0099.85hypothetical protein Csa_5G564290 [Cucumis sativus][more]
gi|778708597|ref|XP_011656241.1|0.0e+0093.22PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis sativus][more]
gi|659074597|ref|XP_008437690.1|0.0e+0092.97PREDICTED: probable RNA-dependent RNA polymerase 1, partial [Cucumis melo][more]
gi|307135834|gb|ADN33705.1|0.0e+0092.97RNA-dependent RNA polymerase [Cucumis melo subsp. melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed RNA polymerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0000165 MAPK cascade
biological_process GO:0010025 wax biosynthetic process
biological_process GO:0001172 transcription, RNA-templated
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0009615 response to virus
biological_process GO:0009617 response to bacterium
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0060148 positive regulation of posttranscriptional gene silencing
biological_process GO:0031348 negative regulation of defense response
cellular_component GO:0031379 RNA-directed RNA polymerase complex
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003968 RNA-directed RNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.280130.1Cucsa.280130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 1..636
score:
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 1..473
score: 5.3E
NoneNo IPR availablePANTHERPTHR23079:SF9RNA-DEPENDENT RNA POLYMERASE 1coord: 1..636
score: