Cla97C01G006770 (gene) Watermelon (97103) v2

Overview
NameCla97C01G006770
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionRNA-dependent RNA polymerase
LocationCla97Chr01 : 6830896 .. 6837155 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAATGGAAGACGTGAAGGGGCACTTGGGAAGCCTAATTTCGAAGGAAACAATGAGGGTAATTTGGGAAGGACAAAATTGGAGTGTGGAATTTGGAATTGGAGTTAGGAAATTATGTTTTTATTTGAGTTATGAACTTCATGACTACAAAATGGAGCTTTGTTTTCAGAATATTTTGGGAGTTGAGTTTCGTTGCCCTCTCCATCAAACTTCCAAGTTTTTTCTCATTCAGGTTTCTTCTTTCTTCTTACTATATGGATAGAATTCCATTTAATTTTAATTAAATAATTTACCTTATACTTTCAACAAATTATAATTATTTAATTATATGGTCGTAGAAAGTTAAAAATCATTCCAATTACGTAATTTATCAATTTTCTAATTCTTTTTTAGGAATAAAATTGACAAAATTTTTAATATTCAAAATCCTCGTGTCCTTGCTTATTTTTATGCATGTCATTTAAATTTTTGGTTTTAATGTACTTAACACATTTATCTTCAAAAGCTAACTGATAAAATTTAGTAACTTTTTAAAAAATCCATAATTAAGTATAATTATAGGTAAAGTTATAAGTCTTAGAATTAATTTTTAGAAGTGAATTGACAAAAACACTCGATGTTCAAGTCGTTTGTACTTTAGATTTTCATTTTTTTCAATTTTATAAGTAAATTAAAAATTATTATTTTCAATGTAACTTTTTTCTCTAATTTTTAAAACTGATTGAACTATAAGGAGATTAAATCATAACTTTTTTCTCTTATCTCTCGAATATGTATAGGTTATGTATGGATGTGAGAATGTGAAAAGAAAATAAATAATTAATGTAAATTTTAATTTTGATTAAATAATAATCAATATTGAAACAATACTCAAATAAAGTATGCAACACAATGTGCGTGTTTTTTTCTTCCAAGTACAGTTCTTTTATTATTATTTTATAACAAATTAATAAGGATAATTTAGGTTTTCTTTAAAATAAAGTACAATGTTGTAAATTTTAAATTTGTTCAGTGGGAAAGTAGTCCAAAAATATTCTCCCCATAAGCCACTTTCTAAAATAATAAGATAAGATAATTATAATTAAATACAAATTGTTATAATTTCCTGACAATGAGATTAGAAATCTCTTTACATCCCAACTCTTTAGATTTCTTAAAATAAATGATGATTAATTTTTAGGTAGTTTTTGAAAATTAAAATTGCTCTAAATATTTTTAAATATAACAAAATATTACTCATTCTATAAGTGCTATCATTAATAGACATTAATAAATGAGATAGTGATAAATGATAACAGTCTGTCAGTGTCTGTCACTAATAGACAATAATATTTTGCTATATTTATAAATAAGTTGACTTAATTTCCTATTTTTGAAAACAACTTTAATTTTTATCTATACTTGGTAATTAATTAATTGAAATCTTTATGAGTCATGAAATTACACATGTTTTGTTTTAATTTCCTCACCAAAAGAAACATTAGCTTGTAAGTGATGAGTAATCTTTTATTTTTCAACAAATATTTTACATAAAAGAATATACTAATTATAAATGACCCAGAAAAAAAGAAATCCTAGATGTACAACCCAATTTCTTAAAATAGATATACTAAACTTATAAACATTCATATACAAACTTAACTATATTCAACTTCATTAAAAGTAGAGTTGTAACGTCATAAGCTTTAAACCTAAGGTATAGATTCAAATGTGCATCTCCTCGCAACTTTAACATACCACCAAAACACATGCATACCCTTACAATTTTTAACGTACCACCAACATCTTGAAATGTTGTGAAAATTGAATTGGCTTTAAGAGCAAAAGAGAAGATAGAGAACAAAAATAAAGAAAGATTGCAAGGAACTTCAAGTGTTGGTGAAGAAAATGGTGAATAAGATGTTCATTATATAGATATTAAAATGTGAATTACAAAATCTTTCGAATTTTATAACGTTCATAAAGTCAATAACTGAAGATTGTTGTAGGAAAAACATTATACATTCTAACATTTTGTTTTATCATATTTATTTATTATTGGTAATCAATTATTAGTTAATTATTTAGTTAACTATCTTCAATCAATTGATAATGGGTTGATAAAAAAAATATGTGTGGTTACATTTTTCTAAGAATACCATTATGGATATTTAATTTAAACCACTTCACCATCTATAAATTAAACAACACCATTAATGAAATTAAGTCACTACCATCCTGAGTTCTAATTAATTTGAAATAATTGGTGTATAAGAGAGAGTTTGGAATGTGGTTGGATGTGTTCATCATTTTGTAATTAATTTGAAATTTGAGGGGCATAAAAGTTAAAAAAAAAAGGTTTTCAAAAATCGTCGCTTTTTAATATAATTATAGATAACTTAAACTACAATAACGAAGATTAACATATATATTAAAATTACAAAAACTAAATAACTAAATTTAAAAGTACAAATCCAAAATTACAAACGATCAAAATAATTTAAACCTAATATTTAAAATATACACATTAAATTAAATTATAAGTATAATAACGGTTAATGTTTATGTTTATTTGGTCGTCTTTTTTTATTATTATTAATTATTTGGTTATCTCGAAGAAAAGAGTTTAATAAATCTATTAACTCTTAATTTTAAAATGTAATTTTTCACAAATTTTTCACTGGTAATTGGTTCAAACAATATGAAATGAATAATCAAAGCAAATTTAGATATTTAAATGAATGTCTTTATCTTTTATATAGTTATATAAAAAGAAAATGAATAATAAATTACATAGCTGGATTACTTGTTTAGTGAGTAAAATTAAAATATCAATATTAGTTTGAAAAAGTAATTATAATTAACTACTGAACTAAAATTAGTGAAATAATTAATATATTAGTTTTAGATGAGTCACATTCAAAGAATATTTAATTTATAAATTATACTTATTTAACTAAAAATATATATATGATCTTCGATTTAATCGGATTGATATTAGCTCTGTTATATTATATTGAATTTCTTCAAATTGGGCAGTTGCAGGGTGCTCCACGGATTTTCAAGAAAACTCCATCATCTTCTTCCTCTCAATTCTATTCCAAGGAATTCACTGGTTTCCGTTGGATTAGGGATGTTGATTTCACTCCATCTTCTTGCATTGGACAATCATTTGCTCTATGTTTGGAACTTTCTCCACGACATCACCTTCCTTCTTTCTTCCAAACATTGGTCGGCTACAAAGAAACCTATGGTCCATTCATTCTCCAGAAAGGTTCTTCTTTCTCTTCCATTTCAAATCTGGTTCCTATCATTACTCCACCCCAACCCTTTGATATCTCTTATAAAATTTTGTTCAAAATCAATGTCTTAGTTCAACATGGTTATCTTCCTGGACCAACAATAGATGATAAATTCTTTCGACTAGTCGATTCAAGTGAAATTCATTCAGACTATGTCGAACATGCCCTAGAAAAATTGTTTCATTTGAAGGAATGTTGTTATGAACCACAAAAGTGGCTAAAGCACCAATATCTGTCATATTATAGCTCTAATCAGCTTCCATGGAAACCTAATATTTCATTGGATGATAGCATGGTCTATGTGCATAGAGTTCAAATTACACCATCTAAAGTGTACTTTTGTGGTCCGGAGGCCAATCTTTCTAATAGAGTAGTTCGTCGTTTTATTGATGATATAGATAACTTTCTTCGTGTGTCTTTTGTTGATGAGGAATTGGATAAACTTCATTCTGTTGATCTGTCTCCACGTACATCATCTACTGAAAATAGTGAAAGAACTAGAGTTTATGATAGAATACTGTCTGTGTTAAAAAATGGTATAATCATTGGTGATAAAAAGTTTGAGTTTTTGGCTTTCTCGACTAGTCAACTAAGGGAAAATTCTTTTTGGATGTTTGCTTCAAGAGAGGGGCTCAATGCAACAAATATTAGAGAGTGGATGGGTGACTTTCGTCAGATAAGGAATGTGGCAAAATATGCTGCTCGACTTGGTCAATCCTTTGGTTCATCTAGAAAAACTTTGTGTGTTGAAGAACATGCAATTGAGGTTATTCCTGATGTAGAAGTTAAAAGGAAGAAAATTATATATTGTTTCTCTGATGGGATTGGAAAAATATCTAAAACATTGGCTAAGAAGGTTGCTGAAAAATGTGGCTTGATCAATCATACACCATCTGCCTTCCAGATTCGATATGCTGGATACAAAGGCGTTGTTGCTATCGACCCTACGTTGAAAAAGAAATTGTCATTACGAAAGAGTATGTTGAAGTATATATCGCTCGATACGCAACTTGATGTTTTGGTATGGAGCAAGTATCAACCTTGTTTTCTTAATCGTCAAGTGATTAATCTTCTGTCAACTCTTGGAATTAAGGATCATGTTTTTGTTAAAAAGCAAAAGAAGGCCATATATCAACTAGATTCTATTTTAAAAGATCCATCAAAGGCACTAGAAATGTTGGAGTTGATGTCCCCGGGAGAAGTGACTGGTATTCTGAAGCAATTGCTTTTGTTTTATAAGCCAAATAAAGAACCTTTTCTAAATATGATGCTACAAACATTTCGAGCGGACAAATTGTTAGATTTGAGGACCAAAGCAAAGATCTTTGTTCCTAAGGGAAGGACAATGATGGGTTGCCTGGATGAAACCCGAACATTAGAATATGGGCAGATATTTGTTCATTGCTCTGTCCCTAGAAGATCAAGTGAAAGTAATTTTGTAGTTACCGGTAAAGTGATTGTTGCTAAAAATCCATGTTTACATCCGGGAGATGTGCGTGTGCTCAATGCTGTTGATGTGAAAGTTCTGCATCATATGGTGGATTGTGTTGTCTTTCCACAAAATGGTAAAAGGTAAGCAAGCTATCACATTTCCATATTTGTTGCAAATTCATGCACTTTCCAGATATATGTTTGCATGTACCTCGTTTCTTTATGATTTCTAATATGATTACTCACATATTTTCATTAGTCTATTTTTAATAGCAATCTTTTTTATATTAATTTTTGTTGTCCTTAACTAATTTTTCAATATATTATGTCAGACCTCACCCAAATGAATGTTCTGGGAGTGATTTGGATGGTGACTTGTACTTTGTTTGTTGGGATCCGGAGCTGACTTGTATTAAACCAGTTAAACCAATGAGCTACGAGCCTGCACCAACTATCCAGCTGGATCATGATGTCAAAATCGAGGTGTGGTTTTACGAAGTATATTGCTATTTCAAATGTGTACATCTTTTTTATTCATTTTATATAAATAAGATGCATTGTACATCATATTTAAAAGTTTACAACAAATTCTACAATTAAGTTTGAATTATATATGATCATTTTGATATAGGAGGTGCAGGAATATTTGGCGAATTACATGGTAAATGATAGTCTTGGAGCCATTGCAAATGCTCACACTATATTTGCAGATAAGGAGCCTAAGAAGGCAATGAGTGCTGAGTGTATTAAACTTGCAAAATTGTTTTTCATAGCTGTTGACTTTCCAAAGACTGGTGTGCCAGCAAACTTACCGCGCAATCTTCGCGTCCATGAGTATCCAGATTTCATGGACAAGCCCAATAAACCAACTTATGTATCAAGTGGTGTTCTCGGGAAGCTTTTTCGAGGAGTGAAAGATGTTTCTTCTGATGTCAACACCCTTGAAATCTTCAATAGGGAAGTTGCTACCAAGTGCTACGATCCAGACATGGAAGTAGATGGTTTTGAAAAGTATTTGAGAGATGCTTTTGATTACAAAACCAGGTACGACTTCAAATTAGGGAACCTTATGGATTATTATGGTATCAAAACAGAACCTGAATTAGTAAGTGGAAATATCTTGAGAATGGGAAAGTCTTTTGATAAAAGGAATGACTTAGAACAAATTAATTGTGCCATGAAATCACTAAGAAAAGAGGTCAGGGCTTGGTTCAATGAGAAGGGAAGTAAGTCTACATACAACAACAACAAAGACGAAGATGAAGAATATGCAAAAGCATCTGCGTGGTACCATGTCACGTATCACCCAGATTATTGGGGTCGTTACAATGAAGGTATGCAAAGAGATCACTTTTTGAGTTTTCCATGGTGTGTTGCTGACAAGCTTATTCAAATCAAAAGAGAGAAGACATCATTGATGAACTTTTCACCAATGTCATCACTGATACACAAATTTGGCGGGTTGAAGTTTATACTAACTTTTGGAGGCCAAGTTATGTTTTTCATTCTAATATTCTCTATATTTTTAGCACGTGAAATATAA

mRNA sequence

ATGGAGAGAATGGAAGACGTGAAGGGGCACTTGGGAAGCCTAATTTCGAAGGAAACAATGAGGGTAATTTGGGAAGGACAAAATTGGAGTGTGGAATTTGGAATTGGAGTTAGGAAATTATGTTTTTATTTGAGTTATGAACTTCATGACTACAAAATGGAGCTTTGTTTTCAGAATATTTTGGGAGTTGAGTTTCGTTGCCCTCTCCATCAAACTTCCAAGTTTTTTCTCATTCAGTTGCAGGGTGCTCCACGGATTTTCAAGAAAACTCCATCATCTTCTTCCTCTCAATTCTATTCCAAGGAATTCACTGGTTTCCGTTGGATTAGGGATGTTGATTTCACTCCATCTTCTTGCATTGGACAATCATTTGCTCTATGTTTGGAACTTTCTCCACGACATCACCTTCCTTCTTTCTTCCAAACATTGGTCGGCTACAAAGAAACCTATGGTCCATTCATTCTCCAGAAAGGTTCTTCTTTCTCTTCCATTTCAAATCTGGTTCCTATCATTACTCCACCCCAACCCTTTGATATCTCTTATAAAATTTTGTTCAAAATCAATGTCTTAGTTCAACATGGTTATCTTCCTGGACCAACAATAGATGATAAATTCTTTCGACTAGTCGATTCAAGTGAAATTCATTCAGACTATGTCGAACATGCCCTAGAAAAATTGTTTCATTTGAAGGAATGTTGTTATGAACCACAAAAGTGGCTAAAGCACCAATATCTGTCATATTATAGCTCTAATCAGCTTCCATGGAAACCTAATATTTCATTGGATGATAGCATGGTCTATGTGCATAGAGTTCAAATTACACCATCTAAAGTGTACTTTTGTGGTCCGGAGGCCAATCTTTCTAATAGAGTAGTTCGTCGTTTTATTGATGATATAGATAACTTTCTTCGTGTGTCTTTTGTTGATGAGGAATTGGATAAACTTCATTCTGTTGATCTGTCTCCACGTACATCATCTACTGAAAATAGTGAAAGAACTAGAGTTTATGATAGAATACTGTCTGTGTTAAAAAATGGTATAATCATTGGTGATAAAAAGTTTGAGTTTTTGGCTTTCTCGACTAGTCAACTAAGGGAAAATTCTTTTTGGATGTTTGCTTCAAGAGAGGGGCTCAATGCAACAAATATTAGAGAGTGGATGGGTGACTTTCGTCAGATAAGGAATGTGGCAAAATATGCTGCTCGACTTGGTCAATCCTTTGGTTCATCTAGAAAAACTTTGTGTGTTGAAGAACATGCAATTGAGGTTATTCCTGATGTAGAAGTTAAAAGGAAGAAAATTATATATTGTTTCTCTGATGGGATTGGAAAAATATCTAAAACATTGGCTAAGAAGGTTGCTGAAAAATGTGGCTTGATCAATCATACACCATCTGCCTTCCAGATTCGATATGCTGGATACAAAGGCGTTGTTGCTATCGACCCTACGTTGAAAAAGAAATTGTCATTACGAAAGAGTATGTTGAAGTATATATCGCTCGATACGCAACTTGATGTTTTGGTATGGAGCAAGTATCAACCTTGTTTTCTTAATCGTCAAGTGATTAATCTTCTGTCAACTCTTGGAATTAAGGATCATGTTTTTGTTAAAAAGCAAAAGAAGGCCATATATCAACTAGATTCTATTTTAAAAGATCCATCAAAGGCACTAGAAATGTTGGAGTTGATGTCCCCGGGAGAAGTGACTGGTATTCTGAAGCAATTGCTTTTGTTTTATAAGCCAAATAAAGAACCTTTTCTAAATATGATGCTACAAACATTTCGAGCGGACAAATTGTTAGATTTGAGGACCAAAGCAAAGATCTTTGTTCCTAAGGGAAGGACAATGATGGGTTGCCTGGATGAAACCCGAACATTAGAATATGGGCAGATATTTGTTCATTGCTCTGTCCCTAGAAGATCAAGTGAAAGTAATTTTGTAGTTACCGGTAAAGTGATTGTTGCTAAAAATCCATGTTTACATCCGGGAGATGTGCGTGTGCTCAATGCTGTTGATGTGAAAGTTCTGCATCATATGGTGGATTGTGTTGTCTTTCCACAAAATGGTAAAAGACCTCACCCAAATGAATGTTCTGGGAGTGATTTGGATGGTGACTTGTACTTTGTTTGTTGGGATCCGGAGCTGACTTGTATTAAACCAGTTAAACCAATGAGCTACGAGCCTGCACCAACTATCCAGCTGGATCATGATGTCAAAATCGAGGAGGTGCAGGAATATTTGGCGAATTACATGGTAAATGATAGTCTTGGAGCCATTGCAAATGCTCACACTATATTTGCAGATAAGGAGCCTAAGAAGGCAATGAGTGCTGAGTGTATTAAACTTGCAAAATTGTTTTTCATAGCTGTTGACTTTCCAAAGACTGGTGTGCCAGCAAACTTACCGCGCAATCTTCGCGTCCATGAGTATCCAGATTTCATGGACAAGCCCAATAAACCAACTTATGTATCAAGTGGTGTTCTCGGGAAGCTTTTTCGAGGAGTGAAAGATGTTTCTTCTGATGTCAACACCCTTGAAATCTTCAATAGGGAAGTTGCTACCAAGTGCTACGATCCAGACATGGAAGTAGATGGTTTTGAAAAGTATTTGAGAGATGCTTTTGATTACAAAACCAGGTACGACTTCAAATTAGGGAACCTTATGGATTATTATGGTATCAAAACAGAACCTGAATTAGTAAGTGGAAATATCTTGAGAATGGGAAAGTCTTTTGATAAAAGGAATGACTTAGAACAAATTAATTGTGCCATGAAATCACTAAGAAAAGAGGTCAGGGCTTGGTTCAATGAGAAGGGAAGTAAGTCTACATACAACAACAACAAAGACGAAGATGAAGAATATGCAAAAGCATCTGCGTGGTACCATGTCACGTATCACCCAGATTATTGGGGTCGTTACAATGAAGGTATGCAAAGAGATCACTTTTTGAGTTTTCCATGGTGTGTTGCTGACAAGCTTATTCAAATCAAAAGAGAGAAGACATCATTGATGAACTTTTCACCAATGTCATCACTGATACACAAATTTGGCGGGTTGAAGTTTATACTAACTTTTGGAGGCCAAGTTATGTTTTTCATTCTAATATTCTCTATATTTTTAGCACGTGAAATATAA

Coding sequence (CDS)

ATGGAGAGAATGGAAGACGTGAAGGGGCACTTGGGAAGCCTAATTTCGAAGGAAACAATGAGGGTAATTTGGGAAGGACAAAATTGGAGTGTGGAATTTGGAATTGGAGTTAGGAAATTATGTTTTTATTTGAGTTATGAACTTCATGACTACAAAATGGAGCTTTGTTTTCAGAATATTTTGGGAGTTGAGTTTCGTTGCCCTCTCCATCAAACTTCCAAGTTTTTTCTCATTCAGTTGCAGGGTGCTCCACGGATTTTCAAGAAAACTCCATCATCTTCTTCCTCTCAATTCTATTCCAAGGAATTCACTGGTTTCCGTTGGATTAGGGATGTTGATTTCACTCCATCTTCTTGCATTGGACAATCATTTGCTCTATGTTTGGAACTTTCTCCACGACATCACCTTCCTTCTTTCTTCCAAACATTGGTCGGCTACAAAGAAACCTATGGTCCATTCATTCTCCAGAAAGGTTCTTCTTTCTCTTCCATTTCAAATCTGGTTCCTATCATTACTCCACCCCAACCCTTTGATATCTCTTATAAAATTTTGTTCAAAATCAATGTCTTAGTTCAACATGGTTATCTTCCTGGACCAACAATAGATGATAAATTCTTTCGACTAGTCGATTCAAGTGAAATTCATTCAGACTATGTCGAACATGCCCTAGAAAAATTGTTTCATTTGAAGGAATGTTGTTATGAACCACAAAAGTGGCTAAAGCACCAATATCTGTCATATTATAGCTCTAATCAGCTTCCATGGAAACCTAATATTTCATTGGATGATAGCATGGTCTATGTGCATAGAGTTCAAATTACACCATCTAAAGTGTACTTTTGTGGTCCGGAGGCCAATCTTTCTAATAGAGTAGTTCGTCGTTTTATTGATGATATAGATAACTTTCTTCGTGTGTCTTTTGTTGATGAGGAATTGGATAAACTTCATTCTGTTGATCTGTCTCCACGTACATCATCTACTGAAAATAGTGAAAGAACTAGAGTTTATGATAGAATACTGTCTGTGTTAAAAAATGGTATAATCATTGGTGATAAAAAGTTTGAGTTTTTGGCTTTCTCGACTAGTCAACTAAGGGAAAATTCTTTTTGGATGTTTGCTTCAAGAGAGGGGCTCAATGCAACAAATATTAGAGAGTGGATGGGTGACTTTCGTCAGATAAGGAATGTGGCAAAATATGCTGCTCGACTTGGTCAATCCTTTGGTTCATCTAGAAAAACTTTGTGTGTTGAAGAACATGCAATTGAGGTTATTCCTGATGTAGAAGTTAAAAGGAAGAAAATTATATATTGTTTCTCTGATGGGATTGGAAAAATATCTAAAACATTGGCTAAGAAGGTTGCTGAAAAATGTGGCTTGATCAATCATACACCATCTGCCTTCCAGATTCGATATGCTGGATACAAAGGCGTTGTTGCTATCGACCCTACGTTGAAAAAGAAATTGTCATTACGAAAGAGTATGTTGAAGTATATATCGCTCGATACGCAACTTGATGTTTTGGTATGGAGCAAGTATCAACCTTGTTTTCTTAATCGTCAAGTGATTAATCTTCTGTCAACTCTTGGAATTAAGGATCATGTTTTTGTTAAAAAGCAAAAGAAGGCCATATATCAACTAGATTCTATTTTAAAAGATCCATCAAAGGCACTAGAAATGTTGGAGTTGATGTCCCCGGGAGAAGTGACTGGTATTCTGAAGCAATTGCTTTTGTTTTATAAGCCAAATAAAGAACCTTTTCTAAATATGATGCTACAAACATTTCGAGCGGACAAATTGTTAGATTTGAGGACCAAAGCAAAGATCTTTGTTCCTAAGGGAAGGACAATGATGGGTTGCCTGGATGAAACCCGAACATTAGAATATGGGCAGATATTTGTTCATTGCTCTGTCCCTAGAAGATCAAGTGAAAGTAATTTTGTAGTTACCGGTAAAGTGATTGTTGCTAAAAATCCATGTTTACATCCGGGAGATGTGCGTGTGCTCAATGCTGTTGATGTGAAAGTTCTGCATCATATGGTGGATTGTGTTGTCTTTCCACAAAATGGTAAAAGACCTCACCCAAATGAATGTTCTGGGAGTGATTTGGATGGTGACTTGTACTTTGTTTGTTGGGATCCGGAGCTGACTTGTATTAAACCAGTTAAACCAATGAGCTACGAGCCTGCACCAACTATCCAGCTGGATCATGATGTCAAAATCGAGGAGGTGCAGGAATATTTGGCGAATTACATGGTAAATGATAGTCTTGGAGCCATTGCAAATGCTCACACTATATTTGCAGATAAGGAGCCTAAGAAGGCAATGAGTGCTGAGTGTATTAAACTTGCAAAATTGTTTTTCATAGCTGTTGACTTTCCAAAGACTGGTGTGCCAGCAAACTTACCGCGCAATCTTCGCGTCCATGAGTATCCAGATTTCATGGACAAGCCCAATAAACCAACTTATGTATCAAGTGGTGTTCTCGGGAAGCTTTTTCGAGGAGTGAAAGATGTTTCTTCTGATGTCAACACCCTTGAAATCTTCAATAGGGAAGTTGCTACCAAGTGCTACGATCCAGACATGGAAGTAGATGGTTTTGAAAAGTATTTGAGAGATGCTTTTGATTACAAAACCAGGTACGACTTCAAATTAGGGAACCTTATGGATTATTATGGTATCAAAACAGAACCTGAATTAGTAAGTGGAAATATCTTGAGAATGGGAAAGTCTTTTGATAAAAGGAATGACTTAGAACAAATTAATTGTGCCATGAAATCACTAAGAAAAGAGGTCAGGGCTTGGTTCAATGAGAAGGGAAGTAAGTCTACATACAACAACAACAAAGACGAAGATGAAGAATATGCAAAAGCATCTGCGTGGTACCATGTCACGTATCACCCAGATTATTGGGGTCGTTACAATGAAGGTATGCAAAGAGATCACTTTTTGAGTTTTCCATGGTGTGTTGCTGACAAGCTTATTCAAATCAAAAGAGAGAAGACATCATTGATGAACTTTTCACCAATGTCATCACTGATACACAAATTTGGCGGGTTGAAGTTTATACTAACTTTTGGAGGCCAAGTTATGTTTTTCATTCTAATATTCTCTATATTTTTAGCACGTGAAATATAA

Protein sequence

MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNILGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGGLKFILTFGGQVMFFILIFSIFLAREI
Homology
[Close]
BLAST of Cla97C01G006770 vs. NCBI nr
Match: KGN51474.1 (hypothetical protein Csa_5G564290 [Cucumis sativus])

HSP 1 Score: 1796.9 bits (4653), Expect = 0.0e+00
Identity = 864/1018 (84.87%), Postives = 933/1018 (91.65%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY++HALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++SVLKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQLRENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT KKKLSLR SMLKY+SLDTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQK
Sbjct: 581  DPTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRA+KLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DL+TK++IFVP+GRTM+GCLDETRTLEYGQ+FVHCSVPRRSSE NFVV GK++VAKNPCL
Sbjct: 701  DLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVRVL+AVDVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIK 
Sbjct: 761  HPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPM+YEPAPTIQL+HDV IEE+QEY ANYMVND +GAIANAHT+FADK  KKAMS ECI
Sbjct: 821  VKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DVNT EIF REVATK YDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGN+L+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  SK TY+   D ++EYAKASAW
Sbjct: 1001 SGNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYD---DIEDEYAKASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGG 1019
            Y+VTYHPDYWG YNEGMQRDHFLSFPWCVADKLIQIKR+K +L N  P+SSL H F G
Sbjct: 1061 YYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cla97C01G006770 vs. NCBI nr
Match: XP_011655453.1 (PREDICTED: probable RNA-dependent RNA polymerase 1 [Cucumis sativus])

HSP 1 Score: 1796.9 bits (4653), Expect = 0.0e+00
Identity = 864/1018 (84.87%), Postives = 933/1018 (91.65%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY++HALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++SVLKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQLRENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT KKKLSLR SMLKY+SLDTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQK
Sbjct: 581  DPTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRA+KLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DL+TK++IFVP+GRTM+GCLDETRTLEYGQ+FVHCSVPRRSSE NFVV GK++VAKNPCL
Sbjct: 701  DLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVRVL+AVDVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIK 
Sbjct: 761  HPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPM+YEPAPTIQL+HDV IEE+QEY ANYMVND +GAIANAHT+FADK  KKAMS ECI
Sbjct: 821  VKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DVNT EIF REVATK YDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGN+L+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  SK TY+   D ++EYAKASAW
Sbjct: 1001 SGNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYD---DIEDEYAKASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGG 1019
            Y+VTYHPDYWG YNEGMQRDHFLSFPWCVADKLIQIKR+K +L N  P+SSL H F G
Sbjct: 1061 YYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cla97C01G006770 vs. NCBI nr
Match: AOW73471.1 (RNA-dependent RNA polymerase 1c2, partial [Cucumis sativus])

HSP 1 Score: 1796.9 bits (4653), Expect = 0.0e+00
Identity = 864/1018 (84.87%), Postives = 933/1018 (91.65%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY++HALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++SVLKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQL+ENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLKENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK IIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT KKKLSLR SMLKY+SLDTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQK
Sbjct: 581  DPTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRA+KLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DL+TK++IFVP+GRTM+GCLDETRTLEYGQ+FVHCSVPRRSSE NFVV GK++VAKNPCL
Sbjct: 701  DLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVRVL+AVDVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIK 
Sbjct: 761  HPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPM+YEPAPTIQL+HDV IEE+QEY ANYMVND +GAIANAHT+FADK  KKAMS ECI
Sbjct: 821  VKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DVNT EIF REVATK YDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGN+L+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  SK TY+   D ++EYAKASAW
Sbjct: 1001 SGNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYD---DIEDEYAKASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGG 1019
            Y+VTYHPDYWG YNEGMQRDHFLSFPWCVADKLIQIKR+K +L N  P+SSL H F G
Sbjct: 1061 YYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cla97C01G006770 vs. NCBI nr
Match: ALM88235.1 (RNA-dependent RNA polymerase 1c [Cucumis sativus])

HSP 1 Score: 1792.3 bits (4641), Expect = 0.0e+00
Identity = 863/1014 (85.11%), Postives = 930/1014 (91.72%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY+EHALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++S+LKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSPENSQRTRVYDRVISILKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQLRENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVAEKCGL +HTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT +KKLSLRKSMLKY+SLDTQLDVL+WSKYQPCFLNRQVINLLSTLGI+D VFVKKQK
Sbjct: 581  DPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRADKLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DLRTK++IFVPKGRTMMGCLDET+TLEYGQ+FVHCS+P RSSE NFVV GKV+VAKNPCL
Sbjct: 701  DLRTKSRIFVPKGRTMMGCLDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVR+L+A+DVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYFVCWD ELTCIK 
Sbjct: 761  HPGDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPMSY+PAPTIQLDHDV IEEVQEY ANYMVND LGAIANAHT+FADK  KKAMSAECI
Sbjct: 821  VKPMSYKPAPTIQLDHDVTIEEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNK TYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DV+  EIF REVATKCYDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVSAFEIFTREVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGNIL+M KSFDKR DLEQI  AMKSLRKEVR WFNE  SKSTY+   D  +EYA+ASAW
Sbjct: 1001 SGNILKMAKSFDKRKDLEQIAFAMKSLRKEVRFWFNENESKSTYD---DIQDEYARASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIH 1015
            Y VTYHPDYWG YNEG +RDHFLSFPWCVADKLIQIKREK S+ N SP SSL+H
Sbjct: 1061 YCVTYHPDYWGCYNEGTKRDHFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111

[Close]
BLAST of Cla97C01G006770 vs. NCBI nr
Match: ADN33705.1 (RNA-dependent RNA polymerase [Cucumis melo subsp. melo])

HSP 1 Score: 1785.8 bits (4624), Expect = 0.0e+00
Identity = 867/1040 (83.37%), Postives = 935/1040 (89.90%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKG LGS+ISK+ MRVIWEG+ W+VEFG GVRKL FYLSYE+ DYKMELCF+NI
Sbjct: 97   MERMEDVKGQLGSMISKDKMRVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENI 156

Query: 61   LGVEFRCPLHQTSKFFLIQLQG---------------------APRIFKKTPSSSSSQFY 120
            L VEFRCPL+Q SKFFLIQ+                       APRIF+KTPSSSSS  Y
Sbjct: 157  LSVEFRCPLNQPSKFFLIQVSSFFLXXXXXXXXXXXXXXLQCRAPRIFRKTPSSSSSPLY 216

Query: 121  SKEFTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGS 180
            S E   FRWIRDVDFTPSSCIGQSF LCL+ SP HHLP FFQTLVGYK TY PFIL+KGS
Sbjct: 217  SNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFFQTLVGYKVTYDPFILRKGS 276

Query: 181  SFSSISNLVPIITPPQPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYV 240
            SF S SNLVPIITPPQ FDISYKILFKIN L+Q GYL GPT+DD+FFRLVDSS  H DY+
Sbjct: 277  SFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTLDDEFFRLVDSSRFHPDYI 336

Query: 241  EHALEKLFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVY 300
            EHALEKLF+LKECCY+PQKWLK QYLSYY SNQLPWKPN+SLDD +VYVHRVQITP KVY
Sbjct: 337  EHALEKLFNLKECCYKPQKWLKDQYLSYYVSNQLPWKPNVSLDDGLVYVHRVQITPLKVY 396

Query: 301  FCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRI 360
            FCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHS+DL+PR+SS EN+ RTRVYDR+
Sbjct: 397  FCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSIDLAPRSSSPENNTRTRVYDRV 456

Query: 361  LSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKY 420
            +SVLKNGI+IGDKKFEFLAFS SQLRENSFWMFASR+GL+A +IREWMGDFRQIRNVAKY
Sbjct: 457  VSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKY 516

Query: 421  AARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGL 480
            AARLGQSFGSSRKTLCV+EH IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVA+KCGL
Sbjct: 517  AARLGQSFGSSRKTLCVKEHEIEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGL 576

Query: 481  INHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNR 540
              HTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSMLKY+SLDTQLDVL+WSKYQPCFLNR
Sbjct: 577  TGHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNR 636

Query: 541  QVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFY 600
            QVINLLSTLGI D VFVKKQK+AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY
Sbjct: 637  QVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFY 696

Query: 601  KPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPR 660
             PN+EPFLNMML TFRA+KLLDL+TK++IFVP+GRTMMGCLDETRTLEYGQ+FVHCSVP 
Sbjct: 697  MPNEEPFLNMMLWTFRANKLLDLKTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPG 756

Query: 661  RSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSG 720
            RSSE NFVV GKV+VAKNPCLHPGDVR+L+A+DVK LHHMVDCVVFPQ GKRPHPNECSG
Sbjct: 757  RSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSG 816

Query: 721  SDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAI 780
            SDLDGDLYFVCWD ELTCIK VKPMSYEPAP+IQLDHDV IEEVQ+Y ANYMVND LGAI
Sbjct: 817  SDLDGDLYFVCWDSELTCIKQVKPMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAI 876

Query: 781  ANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNK 840
            ANAHT+FADK  KKAMSAECIKLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKP+K
Sbjct: 877  ANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDK 936

Query: 841  PTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTR 900
            PTYVS+GVLGKLFRGVKDVSSDVNT EIF +EVATKCYDPDMEVDGFEKYLR+AFDYKT+
Sbjct: 937  PTYVSNGVLGKLFRGVKDVSSDVNTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTK 996

Query: 901  YDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKG 960
            YDFKLGNLMDYYGIKTEPELVSGNIL+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  
Sbjct: 997  YDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENE 1056

Query: 961  SKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKRE 1020
            SK TY +   ED+EYA+ASAWY VTYHPDYWGRYNEG QRDHFLSFPWCVADKLIQIKRE
Sbjct: 1057 SKYTYED--IEDDEYARASAWYCVTYHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKRE 1116

[Close]
BLAST of Cla97C01G006770 vs. TrEMBL
Match: tr|A0A1D8RK46|A0A1D8RK46_CUCSA (RNA-dependent RNA polymerase (Fragment) OS=Cucumis sativus OX=3659 GN=RDR1c2 PE=2 SV=1)

HSP 1 Score: 1796.9 bits (4653), Expect = 0.0e+00
Identity = 864/1018 (84.87%), Postives = 933/1018 (91.65%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY++HALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++SVLKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQL+ENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLKENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK IIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT KKKLSLR SMLKY+SLDTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQK
Sbjct: 581  DPTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRA+KLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DL+TK++IFVP+GRTM+GCLDETRTLEYGQ+FVHCSVPRRSSE NFVV GK++VAKNPCL
Sbjct: 701  DLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVRVL+AVDVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIK 
Sbjct: 761  HPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPM+YEPAPTIQL+HDV IEE+QEY ANYMVND +GAIANAHT+FADK  KKAMS ECI
Sbjct: 821  VKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DVNT EIF REVATK YDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGN+L+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  SK TY+   D ++EYAKASAW
Sbjct: 1001 SGNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYD---DIEDEYAKASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGG 1019
            Y+VTYHPDYWG YNEGMQRDHFLSFPWCVADKLIQIKR+K +L N  P+SSL H F G
Sbjct: 1061 YYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cla97C01G006770 vs. TrEMBL
Match: tr|A0A0A0KRH3|A0A0A0KRH3_CUCSA (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G564290 PE=3 SV=1)

HSP 1 Score: 1796.9 bits (4653), Expect = 0.0e+00
Identity = 864/1018 (84.87%), Postives = 933/1018 (91.65%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY++HALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++SVLKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQLRENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT KKKLSLR SMLKY+SLDTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQK
Sbjct: 581  DPTSKKKLSLRNSMLKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRA+KLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DL+TK++IFVP+GRTM+GCLDETRTLEYGQ+FVHCSVPRRSSE NFVV GK++VAKNPCL
Sbjct: 701  DLKTKSRIFVPEGRTMIGCLDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVRVL+AVDVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIK 
Sbjct: 761  HPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPM+YEPAPTIQL+HDV IEE+QEY ANYMVND +GAIANAHT+FADK  KKAMS ECI
Sbjct: 821  VKPMNYEPAPTIQLNHDVTIEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DVNT EIF REVATK YDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVNTFEIFTREVATKYYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGN+L+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  SK TY+   D ++EYAKASAW
Sbjct: 1001 SGNVLKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENESKFTYD---DIEDEYAKASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGG 1019
            Y+VTYHPDYWG YNEGMQRDHFLSFPWCVADKLIQIKR+K +L N  P+SSL H F G
Sbjct: 1061 YYVTYHPDYWGCYNEGMQRDHFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115

[Close]
BLAST of Cla97C01G006770 vs. TrEMBL
Match: tr|A0A0S1YCZ4|A0A0S1YCZ4_CUCSA (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1c PE=2 SV=1)

HSP 1 Score: 1792.3 bits (4641), Expect = 0.0e+00
Identity = 863/1014 (85.11%), Postives = 930/1014 (91.72%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKGHLGS+IS   MRVIWEG+ WSVEFG G RKL FYLSYE+ +YKMELCF+NI
Sbjct: 101  MERMEDVKGHLGSMISNGKMRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENI 160

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCI 120
            L VEFRCPL++ SKFFLIQLQGAPRIF+KTPSSSSS  YS + T FRWIRDVDFTPSSCI
Sbjct: 161  LSVEFRCPLNEPSKFFLIQLQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCI 220

Query: 121  GQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDIS 180
            GQSF +CL+LSP HHLP FFQTLVGYK TY PFIL KGSS  S SNLVPIITPPQ FDIS
Sbjct: 221  GQSFTICLQLSPSHHLPPFFQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDIS 280

Query: 181  YKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWL 240
            YKILFKIN L+QHGYL GPT+DD+FFRLVDSS  HSDY+EHALEKLF+LKECCY+PQKWL
Sbjct: 281  YKILFKINALLQHGYLSGPTLDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWL 340

Query: 241  KHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDID 300
            K QYLSYY+SNQLPWK NISLDD +VYVHRVQITP KVYFCGPEANLSNRVVRRFI DID
Sbjct: 341  KDQYLSYYTSNQLPWKSNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDID 400

Query: 301  NFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFS 360
            NFLRVSFVDEELDKLHS+DL+PR+SS ENS+RTRVYDR++S+LKNGI+IG+KKFEFLAFS
Sbjct: 401  NFLRVSFVDEELDKLHSIDLAPRSSSPENSQRTRVYDRVISILKNGIVIGNKKFEFLAFS 460

Query: 361  TSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHA 420
             SQLRENSFWMFASREGL+A +IREWMGDF  IRNVAKYAARLGQSFGSSRKTLCVEEH 
Sbjct: 461  ASQLRENSFWMFASREGLSAADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHE 520

Query: 421  IEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAI 480
            IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVAEKCGL +HTPSAFQIRYAGYKGVVAI
Sbjct: 521  IEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAI 580

Query: 481  DPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQK 540
            DPT +KKLSLRKSMLKY+SLDTQLDVL+WSKYQPCFLNRQVINLLSTLGI+D VFVKKQK
Sbjct: 581  DPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQK 640

Query: 541  KAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLL 600
            +AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY PN+EPFLNMML+TFRADKLL
Sbjct: 641  EAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLL 700

Query: 601  DLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCL 660
            DLRTK++IFVPKGRTMMGCLDET+TLEYGQ+FVHCS+P RSSE NFVV GKV+VAKNPCL
Sbjct: 701  DLRTKSRIFVPKGRTMMGCLDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCL 760

Query: 661  HPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKP 720
            HPGDVR+L+A+DVK LHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYFVCWD ELTCIK 
Sbjct: 761  HPGDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQ 820

Query: 721  VKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECI 780
            VKPMSY+PAPTIQLDHDV IEEVQEY ANYMVND LGAIANAHT+FADK  KKAMSAECI
Sbjct: 821  VKPMSYKPAPTIQLDHDVTIEEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECI 880

Query: 781  KLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSS 840
            KLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKPNK TYVS+GVLGKLFRGVKDVSS
Sbjct: 881  KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSS 940

Query: 841  DVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELV 900
            DV+  EIF REVATKCYDPDMEVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELV
Sbjct: 941  DVSAFEIFTREVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELV 1000

Query: 901  SGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAW 960
            SGNIL+M KSFDKR DLEQI  AMKSLRKEVR WFNE  SKSTY+   D  +EYA+ASAW
Sbjct: 1001 SGNILKMAKSFDKRKDLEQIAFAMKSLRKEVRFWFNENESKSTYD---DIQDEYARASAW 1060

Query: 961  YHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSSLIH 1015
            Y VTYHPDYWG YNEG +RDHFLSFPWCVADKLIQIKREK S+ N SP SSL+H
Sbjct: 1061 YCVTYHPDYWGCYNEGTKRDHFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111

[Close]
BLAST of Cla97C01G006770 vs. TrEMBL
Match: tr|E5GB63|E5GB63_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 1785.8 bits (4624), Expect = 0.0e+00
Identity = 867/1040 (83.37%), Postives = 935/1040 (89.90%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            MERMEDVKG LGS+ISK+ MRVIWEG+ W+VEFG GVRKL FYLSYE+ DYKMELCF+NI
Sbjct: 97   MERMEDVKGQLGSMISKDKMRVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENI 156

Query: 61   LGVEFRCPLHQTSKFFLIQLQG---------------------APRIFKKTPSSSSSQFY 120
            L VEFRCPL+Q SKFFLIQ+                       APRIF+KTPSSSSS  Y
Sbjct: 157  LSVEFRCPLNQPSKFFLIQVSSFFLXXXXXXXXXXXXXXLQCRAPRIFRKTPSSSSSPLY 216

Query: 121  SKEFTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGS 180
            S E   FRWIRDVDFTPSSCIGQSF LCL+ SP HHLP FFQTLVGYK TY PFIL+KGS
Sbjct: 217  SNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFFQTLVGYKVTYDPFILRKGS 276

Query: 181  SFSSISNLVPIITPPQPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYV 240
            SF S SNLVPIITPPQ FDISYKILFKIN L+Q GYL GPT+DD+FFRLVDSS  H DY+
Sbjct: 277  SFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTLDDEFFRLVDSSRFHPDYI 336

Query: 241  EHALEKLFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVY 300
            EHALEKLF+LKECCY+PQKWLK QYLSYY SNQLPWKPN+SLDD +VYVHRVQITP KVY
Sbjct: 337  EHALEKLFNLKECCYKPQKWLKDQYLSYYVSNQLPWKPNVSLDDGLVYVHRVQITPLKVY 396

Query: 301  FCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRI 360
            FCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHS+DL+PR+SS EN+ RTRVYDR+
Sbjct: 397  FCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSIDLAPRSSSPENNTRTRVYDRV 456

Query: 361  LSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKY 420
            +SVLKNGI+IGDKKFEFLAFS SQLRENSFWMFASR+GL+A +IREWMGDFRQIRNVAKY
Sbjct: 457  VSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKY 516

Query: 421  AARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGL 480
            AARLGQSFGSSRKTLCV+EH IEVIPDVEV+RK I+YCFSDGIGKISKTLAKKVA+KCGL
Sbjct: 517  AARLGQSFGSSRKTLCVKEHEIEVIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGL 576

Query: 481  INHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNR 540
              HTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSMLKY+SLDTQLDVL+WSKYQPCFLNR
Sbjct: 577  TGHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNR 636

Query: 541  QVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLFY 600
            QVINLLSTLGI D VFVKKQK+AI QLDSIL+DPS+ALE+LELMSPGE+T ILK+LL FY
Sbjct: 637  QVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFY 696

Query: 601  KPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPR 660
             PN+EPFLNMML TFRA+KLLDL+TK++IFVP+GRTMMGCLDETRTLEYGQ+FVHCSVP 
Sbjct: 697  MPNEEPFLNMMLWTFRANKLLDLKTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPG 756

Query: 661  RSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSG 720
            RSSE NFVV GKV+VAKNPCLHPGDVR+L+A+DVK LHHMVDCVVFPQ GKRPHPNECSG
Sbjct: 757  RSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSG 816

Query: 721  SDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAI 780
            SDLDGDLYFVCWD ELTCIK VKPMSYEPAP+IQLDHDV IEEVQ+Y ANYMVND LGAI
Sbjct: 817  SDLDGDLYFVCWDSELTCIKQVKPMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAI 876

Query: 781  ANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNK 840
            ANAHT+FADK  KKAMSAECIKLAKLF IAVDFPKTGVPANLPRNLRVHEYPDFMDKP+K
Sbjct: 877  ANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDK 936

Query: 841  PTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTR 900
            PTYVS+GVLGKLFRGVKDVSSDVNT EIF +EVATKCYDPDMEVDGFEKYLR+AFDYKT+
Sbjct: 937  PTYVSNGVLGKLFRGVKDVSSDVNTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTK 996

Query: 901  YDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKG 960
            YDFKLGNLMDYYGIKTEPELVSGNIL+M KSFDKRNDLEQI  AMKSLRKEVR+WFNE  
Sbjct: 997  YDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENE 1056

Query: 961  SKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKRE 1020
            SK TY +   ED+EYA+ASAWY VTYHPDYWGRYNEG QRDHFLSFPWCVADKLIQIKRE
Sbjct: 1057 SKYTYED--IEDDEYARASAWYCVTYHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKRE 1116

[Close]
BLAST of Cla97C01G006770 vs. TrEMBL
Match: tr|A0A1S3AV70|A0A1S3AV70_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103483034 PE=3 SV=1)

HSP 1 Score: 1665.6 bits (4312), Expect = 0.0e+00
Identity = 804/938 (85.71%), Postives = 864/938 (92.11%), Query Frame = 0 

Query: 82   GAPRIFKKTPSSSSSQFYSKEFTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHLPSFFQ 141
            GAPRIF+KTPSSSSS  YS E   FRWIRDVDFTPSSCIGQSF LCL+ SP HHLP FFQ
Sbjct: 1    GAPRIFRKTPSSSSSPLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFFQ 60

Query: 142  TLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDISYKILFKINVLVQHGYLPGPTI 201
            TLVGYK TY PFIL+KGSSF S SNLVPIITPPQ FDISYKILFKIN L+Q GYL GPT+
Sbjct: 61   TLVGYKVTYDPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTL 120

Query: 202  DDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNISL 261
            DD+FFRLVDSS  H DY+EHALEKLF+LKECCY+PQKWLK QYLSYY SNQLPWKPN+SL
Sbjct: 121  DDEFFRLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYVSNQLPWKPNVSL 180

Query: 262  DDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLS 321
            DD +VYVHRVQITP KVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHS+DL+
Sbjct: 181  DDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSIDLA 240

Query: 322  PRTSSTENSERTRVYDRILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNAT 381
            PR+SS EN+ RTRVYDR++SVLKNGI+IGDKKFEFLAFS SQLRENSFWMFASR+GL+A 
Sbjct: 241  PRSSSPENNTRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASRKGLSAA 300

Query: 382  NIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDG 441
            +IREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCV+EH IEVIPDVEV+RK I+YCFSDG
Sbjct: 301  DIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIEVIPDVEVERKNIMYCFSDG 360

Query: 442  IGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLD 501
            IGKISKTLAKKVA+KCGL  HTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSMLKY+SLD
Sbjct: 361  IGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSLD 420

Query: 502  TQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLE 561
            TQLDVL+WSKYQPCFLNRQVINLLSTLGI D VFVKKQK+AI QLDSIL+DPS+ALE+LE
Sbjct: 421  TQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVLE 480

Query: 562  LMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLD 621
            LMSPGE+T ILK+LL FY PN+EPFLNMML TFRA+KLLDL+TK++IFVP+GRTMMGCLD
Sbjct: 481  LMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDLKTKSRIFVPRGRTMMGCLD 540

Query: 622  ETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVD 681
            ETRTLEYGQ+FVHCSVP RSSE NFVV GKV+VAKNPCLHPGDVR+L+A+DVK LHHMVD
Sbjct: 541  ETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMVD 600

Query: 682  CVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVKIE 741
            CVVFPQ GKRPHPNECSGSDLDGDLYFVCWD ELTCIK VKPMSYEPAP+IQLDHDV IE
Sbjct: 601  CVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYEPAPSIQLDHDVTIE 660

Query: 742  EVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPANL 801
            EVQ+Y ANYMVND LGAIANAHT+FADK  KKAMSAECIKLAKLF IAVDFPKTGVPANL
Sbjct: 661  EVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPANL 720

Query: 802  PRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDPDM 861
            PRNLRVHEYPDFMDKP+KPTYVS+GVLGKLFRGVKDVSSDVNT EIF +EVATKCYDPDM
Sbjct: 721  PRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTKEVATKCYDPDM 780

Query: 862  EVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRNDLEQIN 921
            EVDGFEKYLR+AFDYKT+YDFKLGNLMDYYGIKTEPELVSGNIL+M KSFDKRNDLEQI 
Sbjct: 781  EVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQIA 840

Query: 922  CAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRYNEGMQRDH 981
             AMKSLRKEVR+WFNE  SK TY +   ED+EYA+ASAWY VTYHPDYWGRYNEG QRDH
Sbjct: 841  FAMKSLRKEVRSWFNENESKYTYED--IEDDEYARASAWYCVTYHPDYWGRYNEGTQRDH 900

Query: 982  FLSFPWCVADKLIQIKREKTSLMNFSPMSSLIHKFGGL 1020
            FLSFPWCVADKLIQIKREK SL N SPMSSL + F G+
Sbjct: 901  FLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDGM 936

[Close]
BLAST of Cla97C01G006770 vs. Swiss-Prot
Match: sp|Q9LQV2|RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1173.7 bits (3035), Expect = 0.0e+00
Identity = 588/1005 (58.51%), Postives = 735/1005 (73.13%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            +  +  +K   G  +S +    +W  Q+  V FGIG+RKL F  S+   DY++EL ++NI
Sbjct: 94   LHTISGLKMFFGCQVSTKKFLTLWSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENI 153

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEF----TGFRWIRDVDFTP 120
              ++   P  ++SKF +IQ+ GAP+IF+K     +  F   +F    +  +WIR  DFT 
Sbjct: 154  WQIDLHSPQGRSSKFLVIQVIGAPKIFEKEDQPINLLFGIMDFYSDGSDEQWIRTTDFTS 213

Query: 121  SSCIGQSFALCLELSPRHHLPSFFQTLVGYKE-TYGPFILQKGSSFSSISN-LVPIITPP 180
            SSCIGQS A CLEL    ++P F +    Y E     F+++ GSS+SS +N LVP++ PP
Sbjct: 214  SSCIGQSTAFCLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPP 273

Query: 181  QPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCY 240
              F + ++ILFK+N LVQ+  L GP +D  F+RL++  +     ++H LEKLFHL ECCY
Sbjct: 274  PGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCY 333

Query: 241  EPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRR 300
            EP  WL+ +Y  + S  +LP  P ISLDD +VY++RVQ+TP++VYF GPE N+SNRV+R 
Sbjct: 334  EPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRH 393

Query: 301  FIDDIDNFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKF 360
            +   I+NFLRVSFVDE+L+K+ S+DLSPR+S+     RT++YDRI SVL++GI+IGDKKF
Sbjct: 394  YSKYINNFLRVSFVDEDLEKVRSMDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKF 453

Query: 361  EFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTL 420
            EFLAFS+SQLRENS WMFA  + + A +IR WMGDF  IRNVAKYAARLGQSF SSR+TL
Sbjct: 454  EFLAFSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETL 513

Query: 421  CVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGY 480
             V    IEVIPDVE+      Y FSDGIGKIS   A+KVA KCGL   +PSAFQIRY GY
Sbjct: 514  NVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGY 573

Query: 481  KGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHV 540
            KGVVA+DP   KKLSLRKSM K+ S +T+LDVL WSKYQPC++NRQ+I LLSTLG+ D V
Sbjct: 574  KGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSV 633

Query: 541  FVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLF-YKPNKEPFLNMMLQT 600
            F KKQ++ + +LD+IL  P +A E L LM+PGE T ILK L+L  YKP+ EPFL+MMLQ 
Sbjct: 634  FEKKQREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQN 693

Query: 601  FRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVI 660
            FRA KLL+LRTK +IF+  GR+MMGCLDETRTLEYGQ+ V  S P R     F++TG V+
Sbjct: 694  FRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVV 753

Query: 661  VAKNPCLHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDP 720
            VAKNPCLHPGDVRVL AV+V  L+HMVDCVVFPQ G RPHPNECSGSDLDGD+YFVCWD 
Sbjct: 754  VAKNPCLHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQ 813

Query: 721  ELTCIKPVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKK 780
            EL   +  +PM Y P PT  LDHDV IEEV+EY ANY+VNDSLG IANAHT FADKEP K
Sbjct: 814  ELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 873

Query: 781  AMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFR 840
            A S  CI+LAK F  AVDFPKTGV A +P++L V EYPDFM+KP+KPTY S  V+GKLFR
Sbjct: 874  AFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFR 933

Query: 841  GVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGI 900
             VK+ +  + +++ F  +VA+K YD DMEVDGFE+Y+ +AF  K  YDFKLGNLMDYYGI
Sbjct: 934  EVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGI 993

Query: 901  KTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEE 960
            KTE E++SG I+RM KSF KR D E I  A+++LRKE         + S +N +++E+ E
Sbjct: 994  KTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKE---------TLSLFNASEEEENE 1053

Query: 961  YAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKR 999
             AKASAWYHVTYH  YWG YNEG+ RDHFLSF WCV DKL++IK+
Sbjct: 1054 SAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKK 1085

[Close]
BLAST of Cla97C01G006770 vs. Swiss-Prot
Match: sp|Q0DXS3|RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 903.7 bits (2334), Expect = 2.0e-261
Identity = 446/740 (60.27%), Postives = 564/740 (76.22%), Query Frame = 0 

Query: 276  SKVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRV 335
            S VYF GPE N+SNRVVR F  DI+NFLR+SFVDE+ +KL + DLSPR++S  ++ RT +
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTAL 66

Query: 336  YDRILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRN 395
            Y R+LSVL +GI IG K FEFLAFS+SQLR+NS WMFASR+GL A++IR WMGDFR IRN
Sbjct: 67   YKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRN 126

Query: 396  VAKYAARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAE 455
            VAKYAARLGQSF SS +TL V+++ +E I D++   + +   FSDGIGKIS   A +VA 
Sbjct: 127  VAKYAARLGQSFSSSTETLKVQKYEVEEISDIKNGTQHV---FSDGIGKISSAFANEVAM 186

Query: 456  KCGLINHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPC 515
            KC L    PSAFQIRY GYKGVVA+DPT + KLSLRKSMLK+ S +  +DVL +SKYQP 
Sbjct: 187  KCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPG 246

Query: 516  FLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQL 575
            FLNRQ+I LLSTLG++D VF +KQ++A+ QL+ ++ DP  A+E +ELM  GE+T  +K+L
Sbjct: 247  FLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKEL 306

Query: 576  LLF-YKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVH 635
            LL  Y+P+ EP+L+M+LQTFRA KLL+L+TK++I +PKGR MMGCLDETRTL+YGQ+F+ 
Sbjct: 307  LLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIR 366

Query: 636  CSVPRRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHP 695
             +     ++  F VTGKV++AKNPCLHPGD+R+L+AVDV VLHHM +CVVFPQ G RPHP
Sbjct: 367  ATSGVNDND-RFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHP 426

Query: 696  NECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVND 755
            NECSGSDLDGD+YFV WDP L   + V PM Y PAPT  LDHDV IEEV+EY  NY+VN+
Sbjct: 427  NECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNE 486

Query: 756  SLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFM 815
            SLG IANAH +FADKE  KA S+ CI+LAKLF IAVDFPKTGVPA +P  L V EYPDFM
Sbjct: 487  SLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFM 546

Query: 816  DKPNKPTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAF 875
            +K +K TY S GV+GKL+R +K  +  +   + F REVA + YD DM VDG+E Y+ +A 
Sbjct: 547  EKLDKVTYESKGVIGKLYREIKKHTPHI---KHFTREVARRSYDTDMIVDGYEDYITEAM 606

Query: 876  DYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAW 935
              K  YDFKLGNLMD+YGIK+E E++SG IL+M K+F K++D + I  A++SLRKE R+ 
Sbjct: 607  ALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSR 666

Query: 936  FNEKGSKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLI 995
            F+E    S  +N    D   AKASAWYHVTYHP++WG YNEG +R HF+SFPWC+ +KL+
Sbjct: 667  FSE---MSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLL 726

Query: 996  QIKREKTSLMNFSPMSSLIH 1015
            +IK+ +  +    P    +H
Sbjct: 727  RIKQRRKFVRKMQPELFSLH 736

[Close]
BLAST of Cla97C01G006770 vs. Swiss-Prot
Match: sp|Q7XM31|RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 1.5e-205
Identity = 417/1007 (41.41%), Postives = 591/1007 (58.69%), Query Frame = 0 

Query: 24   WEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNILGVEFRCPLHQTSKFFLIQLQGA 83
            W+G     E   G R++  YL ++   YK+E+ F+++      C L       L+QL  A
Sbjct: 130  WDGVR--AEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDC-LGCTLDGMGA-ILLQLNYA 189

Query: 84   PRIFK--KTPSSSS----SQFYS-KEFTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHL 143
            PRI      P+ +S     +F++ KE   F W+R +DFTP+   G+   L L+L     +
Sbjct: 190  PRIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALV 249

Query: 144  PSFFQTLVGYKETYGPFILQKGSSFSSISNLVPIITPPQPFDISYKILFKINVLVQHGYL 203
                ++L  +    G   +       + SN+VP++  P+ + + Y++LF++N L+  G +
Sbjct: 250  SDILKSL-PFSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKI 309

Query: 204  PGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCYEPQKWLKHQYLSYYSSNQ--LP 263
                ++   F+ +   E+  D      EK+  L+  CY P ++++ +  S   S+   L 
Sbjct: 310  VAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLS 369

Query: 264  WKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDK 323
             +     +  ++  +RV ITPSK++  GPE  ++N VV+       +F+RV+FVDE+  K
Sbjct: 370  NEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSK 429

Query: 324  LHSVDLSPRTSSTENSE--RTRVYDRILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMF 383
            L S  +S R      S+  +T +Y RILS+LK G  IG K FEFLAFS SQLR NS WMF
Sbjct: 430  LSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMF 489

Query: 384  ASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRK 443
            AS   LNA  IR WMG F  IR+V+K AAR+GQ F SSR+T  V    +EVIPD+E+   
Sbjct: 490  ASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTD 549

Query: 444  KIIYCFSDGIGKISKTLAKKVAEKCGL-INHTPSAFQIRYAGYKGVVAIDPTLKKKLSLR 503
               Y FSDGIGKIS   AK+VA   GL   + PSAFQIRY GYKGV+AIDP     LSLR
Sbjct: 550  GSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLR 609

Query: 504  KSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILK 563
             SM K+ S    L++  WSK QPC++NR++I+LLSTLGI+D +FV  Q+  + + + +L 
Sbjct: 610  PSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLT 669

Query: 564  DPSKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVP 623
            +   AL +L  +   E    +K LL  Y+P+ EP+L+M+L+  + ++L D+RT+ KI VP
Sbjct: 670  NKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVP 729

Query: 624  KGRTMMGCLDETRTLEYGQIFV----HCSVPRRSSESNF--------VVTGKVIVAKNPC 683
            KGR ++GCLDET  LEYGQ+++    +    + S++S F         V GKV + KNPC
Sbjct: 730  KGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPC 789

Query: 684  LHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIK 743
            LHPGD+RVL A+    L  MVDC+VFPQ G+RPHPNECSG DLDGDLYF+ WD +L   K
Sbjct: 790  LHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEK 849

Query: 744  PVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAEC 803
               PM Y       +DH V +EE+Q++  +YM+NDSLGAI+ AH I AD+ P KA S EC
Sbjct: 850  VDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPEC 909

Query: 804  IKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFR---GVK 863
            ++LA L  +AVDF KTG PA +PR LR  EYPDFM++  KP Y+S+GVLGKL+R   G  
Sbjct: 910  LQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHM 969

Query: 864  DVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTE 923
            + S D   L   + +  +  YDPD+EV G +++L+ A +Y   Y+ KL  LM+YY  + E
Sbjct: 970  EKSGDSGALSSSSAQ-PSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELE 1029

Query: 924  PELVSGNILRMGKSFDKRND------LEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDE 983
             E+++GNI R    + KR++       ++I  A+ +L +E R W          ++ K+E
Sbjct: 1030 DEILTGNI-RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWL--------LSSRKEE 1089

Query: 984  DEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIK 998
            D     ASAWY VTYHPD         +   F SFPW   D L+ IK
Sbjct: 1090 DAS-RMASAWYRVTYHPD-------RRRGKRFWSFPWIACDNLLAIK 1111

[Close]
BLAST of Cla97C01G006770 vs. Swiss-Prot
Match: sp|O82504|RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 1.9e-200
Identity = 393/998 (39.38%), Postives = 587/998 (58.82%), Query Frame = 0 

Query: 51   YKMELCFQNILGVEFRCPLHQTSKF--FLIQLQGAPRIFKKTPSSSSSQF------YSKE 110
            YK+E+ F++I+     C     S+   FL++L+  P++FK+     +++F      + KE
Sbjct: 154  YKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKE 213

Query: 111  FTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFS 170
               F WIR  DF+ S  IG S   CLE+     +   F  L  Y+E         G +F+
Sbjct: 214  DFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFA 273

Query: 171  SISNLVPIITPP-QPFDISYKILFKINVLVQHGYLP-GPTIDDKFFRLVDSSEIHSDYVE 230
            S + +VP++       +  Y+ILF++N LV    +      D +  +++    + +  V 
Sbjct: 274  SAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKISLFAASDMELIKILRGMSLETALV- 333

Query: 231  HALEKLFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNIS----LDDSMVYVHRVQITPS 290
              L+KL      CY+P  ++K Q  S     ++   P  +     + +++   R  +TPS
Sbjct: 334  -ILKKLHQQSSICYDPVFFVKTQMQSVV--KKMKHSPASAYKRLTEQNIMSCQRAYVTPS 393

Query: 291  KVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKL--HSVDLSPRTSSTENSERTR 350
            K+Y  GPE   +N VV+ F + + +F+RV+FV+E+  KL  +++ ++ +        RT 
Sbjct: 394  KIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTN 453

Query: 351  VYDRILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIR 410
            +Y+R+LS+L  GI +G K+FEFLAFS SQLR NS WMFAS E + A +IREWMG FR+IR
Sbjct: 454  IYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIR 513

Query: 411  NVAKYAARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVA 470
            +++K AAR+GQ F +SR+TL V    +E IPD+EV      YCFSDGIGKIS   AK+VA
Sbjct: 514  SISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVA 573

Query: 471  EKCGLINHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQP 530
            +KCGL +H PSAFQIRY GYKGV+A+D +  +KLSLR SMLK+ S +  L+V  W++  P
Sbjct: 574  QKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMP 633

Query: 531  CFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGIL-K 590
            CFLNR++I LLSTLGI+D +F   Q   +  L ++L+D   AL +L+ +S      +L K
Sbjct: 634  CFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVK 693

Query: 591  QLLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFV 650
             LL  Y P+ EP+L+MML+     +L +L+++ +I VPKGR ++GC+DE   LEYGQ++V
Sbjct: 694  MLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYV 753

Query: 651  HCSVP------------RRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHH--M 710
              ++             R+  E   VV GKV+V KNPCLHPGD+RVL+A+          
Sbjct: 754  RVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGY 813

Query: 711  VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVK 770
            +DC++FPQ G+RPHPNECSG DLDGD +FV WD ++   +   PM Y  +    +DHDV 
Sbjct: 814  LDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVT 873

Query: 771  IEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPA 830
            +EE+ ++  +YM++D+LG I+ AH + AD++P+KA S +C++LA L   AVDF KTG PA
Sbjct: 874  LEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPA 933

Query: 831  NLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDP 890
             +P  L+  E+PDF+++  KPTY+S  V GKL+R VK   S +   +       T  YD 
Sbjct: 934  EMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVK---SSLAQRKPEAESEDTVAYDV 993

Query: 891  DMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRND--- 950
             +E  GFE ++  A  ++  Y  KL +LM YYG   E E+++G IL+  + +  R++   
Sbjct: 994  TLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTG-ILKTKEMYLARDNRRY 1053

Query: 951  ---LEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRY 1010
                ++I  ++K L KE   WF +        + +DE ++   ASAWY+VTY+P      
Sbjct: 1054 GDMKDRITLSVKDLHKEAMGWFEK--------SCEDEQQKKKLASAWYYVTYNP------ 1113

Query: 1011 NEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSS 1012
            N   ++  FLSFPW V D L+ IK E     +    +S
Sbjct: 1114 NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVEEKTS 1128

[Close]
BLAST of Cla97C01G006770 vs. Swiss-Prot
Match: sp|Q9SG02|RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 7.9e-162
Identity = 383/1067 (35.90%), Postives = 568/1067 (53.23%), Query Frame = 0 

Query: 11   LGSLISKETMRVIW--EGQNWSVEFGIGVRKLCF-------YLSYELH-----DYKMELC 70
            +G+L+S++   V W  EG ++ V+      K CF       +    +H     DYK+EL 
Sbjct: 139  IGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELL 198

Query: 71   FQNILGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEF--TGFRWIRDVDF 130
             ++I  V     LH      ++QL  +PR++ +T           +       WIR  DF
Sbjct: 199  VRDIQTVRQYKTLH--GFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTDF 258

Query: 131  TPSSCIGQSFALCLELSPRHHLPSFFQTLVGY---------KETYGPFILQKGSSFSSIS 190
            T    IG+  +  + +SPR+   +  +T + Y         +  + P I  +      +S
Sbjct: 259  TQVGAIGRCHSYRVLISPRYE--NKLRTALDYFRMRRVQEERVRWPPRIRNEPCFGEPVS 318

Query: 191  NLVPIITPPQPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEK 250
            +    I   +   IS++I+F +N ++  G      + ++FF L+ +     D    +L+ 
Sbjct: 319  DHFFCIHHKE--GISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQP--KDVNIASLKH 378

Query: 251  LFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEA 310
            L   K   ++  K LK        + +L      S D S   + R+ ITP++ Y   PE 
Sbjct: 379  LCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDIS--EIRRLVITPTRAYCLPPEV 438

Query: 311  NLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLS-------PRTSSTENSERTRVYDR 370
             LSNRV+RR+    + FLRV+F+DE +  ++S  LS          +S+  S++T V+ R
Sbjct: 439  ELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKR 498

Query: 371  ILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAK 430
            + S+L +G  +  +K+ FLAFS +QLR+ S W FA       ++I+ WMG F+  +NVAK
Sbjct: 499  VKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAK 558

Query: 431  YAARLGQSFGSSRKTLCVEEHAIEV-IPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKC 490
             AAR+G  F S+  T+ V  H ++  +PD+E    +  Y FSDGIG I+  LA +V EK 
Sbjct: 559  CAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKL 618

Query: 491  GL-INHTPSAFQIRYAGYKGVVAIDPTLKK--KLSLRKSMLKYISLDTQLDVLVWSKYQP 550
             L ++++P A+QIRYAG+KGVVA  P+     +L+LR SM K+ S  T L++  W+++QP
Sbjct: 619  KLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQP 678

Query: 551  CFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQ 610
             FLNRQ+I LLS LG+ D +F   Q+  +Y+L+ IL D   A E+L      +       
Sbjct: 679  GFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIM 738

Query: 611  LLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVH 670
            L   +KP  EP L  ML + R  +L  LR K++IFV  GR +MGCLDE   LE+GQ F+ 
Sbjct: 739  LSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQ 798

Query: 671  CSVP-------------RRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVD 730
             S P             + +     VV G V +AKNPCLHPGDVR+L AVDV  LHHM D
Sbjct: 799  VSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYD 858

Query: 731  CVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPEL--TCIKPVKPMSYEPAPTIQLDHDVK 790
            C++FPQ G RPH NE SGSDLDGDLYFV WD +L     K    M Y+ A    L   V 
Sbjct: 859  CLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVN 918

Query: 791  IEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPA 850
             +++ ++ A  + N+ LG I NAH + AD+    AM  EC+ LA+L   AVDFPKTG   
Sbjct: 919  HQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIV 978

Query: 851  NLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDV-SSDVNTLEIFNREVATKCYD 910
            ++P +L+   YPDFM K +  TY S+ +LG+L+R VK+V   D       + + +   YD
Sbjct: 979  SMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYD 1038

Query: 911  PDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRND-- 970
              +E+ GFE  + +A+ +K  YD +L  L+  Y ++ E E+V+G+I  M K   K+    
Sbjct: 1039 AVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGEL 1098

Query: 971  LEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEY---AKASAWYHVTYHPDYWGRY 1013
             E++  +  SL+KE R  F E  +   + N  +E++      KASAWYHVTYHP++  + 
Sbjct: 1099 KERLKHSYNSLKKEFRKVFEE--TIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKS 1158

[Close]
BLAST of Cla97C01G006770 vs. TAIR10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1)

HSP 1 Score: 1173.7 bits (3035), Expect = 0.0e+00
Identity = 588/1005 (58.51%), Postives = 735/1005 (73.13%), Query Frame = 0 

Query: 1    MERMEDVKGHLGSLISKETMRVIWEGQNWSVEFGIGVRKLCFYLSYELHDYKMELCFQNI 60
            +  +  +K   G  +S +    +W  Q+  V FGIG+RKL F  S+   DY++EL ++NI
Sbjct: 94   LHTISGLKMFFGCQVSTKKFLTLWSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENI 153

Query: 61   LGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEF----TGFRWIRDVDFTP 120
              ++   P  ++SKF +IQ+ GAP+IF+K     +  F   +F    +  +WIR  DFT 
Sbjct: 154  WQIDLHSPQGRSSKFLVIQVIGAPKIFEKEDQPINLLFGIMDFYSDGSDEQWIRTTDFTS 213

Query: 121  SSCIGQSFALCLELSPRHHLPSFFQTLVGYKE-TYGPFILQKGSSFSSISN-LVPIITPP 180
            SSCIGQS A CLEL    ++P F +    Y E     F+++ GSS+SS +N LVP++ PP
Sbjct: 214  SSCIGQSTAFCLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPP 273

Query: 181  QPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEKLFHLKECCY 240
              F + ++ILFK+N LVQ+  L GP +D  F+RL++  +     ++H LEKLFHL ECCY
Sbjct: 274  PGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCY 333

Query: 241  EPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEANLSNRVVRR 300
            EP  WL+ +Y  + S  +LP  P ISLDD +VY++RVQ+TP++VYF GPE N+SNRV+R 
Sbjct: 334  EPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRH 393

Query: 301  FIDDIDNFLRVSFVDEELDKLHSVDLSPRTSSTENSERTRVYDRILSVLKNGIIIGDKKF 360
            +   I+NFLRVSFVDE+L+K+ S+DLSPR+S+     RT++YDRI SVL++GI+IGDKKF
Sbjct: 394  YSKYINNFLRVSFVDEDLEKVRSMDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKF 453

Query: 361  EFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAKYAARLGQSFGSSRKTL 420
            EFLAFS+SQLRENS WMFA  + + A +IR WMGDF  IRNVAKYAARLGQSF SSR+TL
Sbjct: 454  EFLAFSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETL 513

Query: 421  CVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGY 480
             V    IEVIPDVE+      Y FSDGIGKIS   A+KVA KCGL   +PSAFQIRY GY
Sbjct: 514  NVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGY 573

Query: 481  KGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQPCFLNRQVINLLSTLGIKDHV 540
            KGVVA+DP   KKLSLRKSM K+ S +T+LDVL WSKYQPC++NRQ+I LLSTLG+ D V
Sbjct: 574  KGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSV 633

Query: 541  FVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQLLLF-YKPNKEPFLNMMLQT 600
            F KKQ++ + +LD+IL  P +A E L LM+PGE T ILK L+L  YKP+ EPFL+MMLQ 
Sbjct: 634  FEKKQREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQN 693

Query: 601  FRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVI 660
            FRA KLL+LRTK +IF+  GR+MMGCLDETRTLEYGQ+ V  S P R     F++TG V+
Sbjct: 694  FRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVV 753

Query: 661  VAKNPCLHPGDVRVLNAVDVKVLHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDP 720
            VAKNPCLHPGDVRVL AV+V  L+HMVDCVVFPQ G RPHPNECSGSDLDGD+YFVCWD 
Sbjct: 754  VAKNPCLHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQ 813

Query: 721  ELTCIKPVKPMSYEPAPTIQLDHDVKIEEVQEYLANYMVNDSLGAIANAHTIFADKEPKK 780
            EL   +  +PM Y P PT  LDHDV IEEV+EY ANY+VNDSLG IANAHT FADKEP K
Sbjct: 814  ELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 873

Query: 781  AMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFR 840
            A S  CI+LAK F  AVDFPKTGV A +P++L V EYPDFM+KP+KPTY S  V+GKLFR
Sbjct: 874  AFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFR 933

Query: 841  GVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGI 900
             VK+ +  + +++ F  +VA+K YD DMEVDGFE+Y+ +AF  K  YDFKLGNLMDYYGI
Sbjct: 934  EVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGI 993

Query: 901  KTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEE 960
            KTE E++SG I+RM KSF KR D E I  A+++LRKE         + S +N +++E+ E
Sbjct: 994  KTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKE---------TLSLFNASEEEENE 1053

Query: 961  YAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKR 999
             AKASAWYHVTYH  YWG YNEG+ RDHFLSF WCV DKL++IK+
Sbjct: 1054 SAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKK 1085

[Close]
BLAST of Cla97C01G006770 vs. TAIR10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2)

HSP 1 Score: 701.0 bits (1808), Expect = 1.1e-201
Identity = 393/998 (39.38%), Postives = 587/998 (58.82%), Query Frame = 0 

Query: 51   YKMELCFQNILGVEFRCPLHQTSKF--FLIQLQGAPRIFKKTPSSSSSQF------YSKE 110
            YK+E+ F++I+     C     S+   FL++L+  P++FK+     +++F      + KE
Sbjct: 154  YKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKE 213

Query: 111  FTGFRWIRDVDFTPSSCIGQSFALCLELSPRHHLPSFFQTLVGYKETYGPFILQKGSSFS 170
               F WIR  DF+ S  IG S   CLE+     +   F  L  Y+E         G +F+
Sbjct: 214  DFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFA 273

Query: 171  SISNLVPIITPP-QPFDISYKILFKINVLVQHGYLP-GPTIDDKFFRLVDSSEIHSDYVE 230
            S + +VP++       +  Y+ILF++N LV    +      D +  +++    + +  V 
Sbjct: 274  SAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKISLFAASDMELIKILRGMSLETALV- 333

Query: 231  HALEKLFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNIS----LDDSMVYVHRVQITPS 290
              L+KL      CY+P  ++K Q  S     ++   P  +     + +++   R  +TPS
Sbjct: 334  -ILKKLHQQSSICYDPVFFVKTQMQSVV--KKMKHSPASAYKRLTEQNIMSCQRAYVTPS 393

Query: 291  KVYFCGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKL--HSVDLSPRTSSTENSERTR 350
            K+Y  GPE   +N VV+ F + + +F+RV+FV+E+  KL  +++ ++ +        RT 
Sbjct: 394  KIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTN 453

Query: 351  VYDRILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIR 410
            +Y+R+LS+L  GI +G K+FEFLAFS SQLR NS WMFAS E + A +IREWMG FR+IR
Sbjct: 454  IYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIR 513

Query: 411  NVAKYAARLGQSFGSSRKTLCVEEHAIEVIPDVEVKRKKIIYCFSDGIGKISKTLAKKVA 470
            +++K AAR+GQ F +SR+TL V    +E IPD+EV      YCFSDGIGKIS   AK+VA
Sbjct: 514  SISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVA 573

Query: 471  EKCGLINHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYISLDTQLDVLVWSKYQP 530
            +KCGL +H PSAFQIRY GYKGV+A+D +  +KLSLR SMLK+ S +  L+V  W++  P
Sbjct: 574  QKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMP 633

Query: 531  CFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGIL-K 590
            CFLNR++I LLSTLGI+D +F   Q   +  L ++L+D   AL +L+ +S      +L K
Sbjct: 634  CFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVK 693

Query: 591  QLLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFV 650
             LL  Y P+ EP+L+MML+     +L +L+++ +I VPKGR ++GC+DE   LEYGQ++V
Sbjct: 694  MLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYV 753

Query: 651  HCSVP------------RRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHH--M 710
              ++             R+  E   VV GKV+V KNPCLHPGD+RVL+A+          
Sbjct: 754  RVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGY 813

Query: 711  VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTIQLDHDVK 770
            +DC++FPQ G+RPHPNECSG DLDGD +FV WD ++   +   PM Y  +    +DHDV 
Sbjct: 814  LDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVT 873

Query: 771  IEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPA 830
            +EE+ ++  +YM++D+LG I+ AH + AD++P+KA S +C++LA L   AVDF KTG PA
Sbjct: 874  LEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPA 933

Query: 831  NLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDVSSDVNTLEIFNREVATKCYDP 890
             +P  L+  E+PDF+++  KPTY+S  V GKL+R VK   S +   +       T  YD 
Sbjct: 934  EMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVK---SSLAQRKPEAESEDTVAYDV 993

Query: 891  DMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRND--- 950
             +E  GFE ++  A  ++  Y  KL +LM YYG   E E+++G IL+  + +  R++   
Sbjct: 994  TLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTG-ILKTKEMYLARDNRRY 1053

Query: 951  ---LEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEYAKASAWYHVTYHPDYWGRY 1010
                ++I  ++K L KE   WF +        + +DE ++   ASAWY+VTY+P      
Sbjct: 1054 GDMKDRITLSVKDLHKEAMGWFEK--------SCEDEQQKKKLASAWYYVTYNP------ 1113

Query: 1011 NEGMQRDHFLSFPWCVADKLIQIKREKTSLMNFSPMSS 1012
            N   ++  FLSFPW V D L+ IK E     +    +S
Sbjct: 1114 NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVEEKTS 1128

[Close]
BLAST of Cla97C01G006770 vs. TAIR10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6)

HSP 1 Score: 572.8 bits (1475), Expect = 4.4e-163
Identity = 383/1067 (35.90%), Postives = 568/1067 (53.23%), Query Frame = 0 

Query: 11   LGSLISKETMRVIW--EGQNWSVEFGIGVRKLCF-------YLSYELH-----DYKMELC 70
            +G+L+S++   V W  EG ++ V+      K CF       +    +H     DYK+EL 
Sbjct: 139  IGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELL 198

Query: 71   FQNILGVEFRCPLHQTSKFFLIQLQGAPRIFKKTPSSSSSQFYSKEF--TGFRWIRDVDF 130
             ++I  V     LH      ++QL  +PR++ +T           +       WIR  DF
Sbjct: 199  VRDIQTVRQYKTLH--GFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTDF 258

Query: 131  TPSSCIGQSFALCLELSPRHHLPSFFQTLVGY---------KETYGPFILQKGSSFSSIS 190
            T    IG+  +  + +SPR+   +  +T + Y         +  + P I  +      +S
Sbjct: 259  TQVGAIGRCHSYRVLISPRYE--NKLRTALDYFRMRRVQEERVRWPPRIRNEPCFGEPVS 318

Query: 191  NLVPIITPPQPFDISYKILFKINVLVQHGYLPGPTIDDKFFRLVDSSEIHSDYVEHALEK 250
            +    I   +   IS++I+F +N ++  G      + ++FF L+ +     D    +L+ 
Sbjct: 319  DHFFCIHHKE--GISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQP--KDVNIASLKH 378

Query: 251  LFHLKECCYEPQKWLKHQYLSYYSSNQLPWKPNISLDDSMVYVHRVQITPSKVYFCGPEA 310
            L   K   ++  K LK        + +L      S D S   + R+ ITP++ Y   PE 
Sbjct: 379  LCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDIS--EIRRLVITPTRAYCLPPEV 438

Query: 311  NLSNRVVRRFIDDIDNFLRVSFVDEELDKLHSVDLS-------PRTSSTENSERTRVYDR 370
             LSNRV+RR+    + FLRV+F+DE +  ++S  LS          +S+  S++T V+ R
Sbjct: 439  ELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKR 498

Query: 371  ILSVLKNGIIIGDKKFEFLAFSTSQLRENSFWMFASREGLNATNIREWMGDFRQIRNVAK 430
            + S+L +G  +  +K+ FLAFS +QLR+ S W FA       ++I+ WMG F+  +NVAK
Sbjct: 499  VKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAK 558

Query: 431  YAARLGQSFGSSRKTLCVEEHAIEV-IPDVEVKRKKIIYCFSDGIGKISKTLAKKVAEKC 490
             AAR+G  F S+  T+ V  H ++  +PD+E    +  Y FSDGIG I+  LA +V EK 
Sbjct: 559  CAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVMEKL 618

Query: 491  GL-INHTPSAFQIRYAGYKGVVAIDPTLKK--KLSLRKSMLKYISLDTQLDVLVWSKYQP 550
             L ++++P A+QIRYAG+KGVVA  P+     +L+LR SM K+ S  T L++  W+++QP
Sbjct: 619  KLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQP 678

Query: 551  CFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTGILKQ 610
             FLNRQ+I LLS LG+ D +F   Q+  +Y+L+ IL D   A E+L      +       
Sbjct: 679  GFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIM 738

Query: 611  LLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVH 670
            L   +KP  EP L  ML + R  +L  LR K++IFV  GR +MGCLDE   LE+GQ F+ 
Sbjct: 739  LSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQ 798

Query: 671  CSVP-------------RRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVD 730
             S P             + +     VV G V +AKNPCLHPGDVR+L AVDV  LHHM D
Sbjct: 799  VSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYD 858

Query: 731  CVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPEL--TCIKPVKPMSYEPAPTIQLDHDVK 790
            C++FPQ G RPH NE SGSDLDGDLYFV WD +L     K    M Y+ A    L   V 
Sbjct: 859  CLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVN 918

Query: 791  IEEVQEYLANYMVNDSLGAIANAHTIFADKEPKKAMSAECIKLAKLFFIAVDFPKTGVPA 850
             +++ ++ A  + N+ LG I NAH + AD+    AM  EC+ LA+L   AVDFPKTG   
Sbjct: 919  HQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIV 978

Query: 851  NLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVKDV-SSDVNTLEIFNREVATKCYD 910
            ++P +L+   YPDFM K +  TY S+ +LG+L+R VK+V   D       + + +   YD
Sbjct: 979  SMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYD 1038

Query: 911  PDMEVDGFEKYLRDAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMGKSFDKRND-- 970
              +E+ GFE  + +A+ +K  YD +L  L+  Y ++ E E+V+G+I  M K   K+    
Sbjct: 1039 AVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGEL 1098

Query: 971  LEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKDEDEEY---AKASAWYHVTYHPDYWGRY 1013
             E++  +  SL+KE R  F E  +   + N  +E++      KASAWYHVTYHP++  + 
Sbjct: 1099 KERLKHSYNSLKKEFRKVFEE--TIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKS 1158

[Close]
BLAST of Cla97C01G006770 vs. TAIR10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein)

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-26
Identity = 131/486 (26.95%), Postives = 215/486 (44.24%), Query Frame = 0 

Query: 426 DVEVKRKKIIYCFSDGIGKISKTLAK---------------KVAEKCGLINHTPSAFQIR 485
           DV  K KK     SDG G IS+ LA+                + E C         F++ 
Sbjct: 387 DVLDKNKKPC-IHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMF 446

Query: 486 YAGY--KGVVAIDPTL-KKKLSLRKSMLKYISLDTQLD----------VLVWSKYQPCFL 545
           Y GY  KG   ++  L  + + +R SM+K +S D  L           V   +  +   L
Sbjct: 447 YDGYAVKGTFLLNKKLCPRTVQVRPSMIK-VSKDPSLSNFSTFNALEVVTTSNPPKRTKL 506

Query: 546 NRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDPSKALEMLELMSPGEVTG-ILKQLL 605
           ++ ++ LLS  GI +  F+      + +  SI  +   AL     ++ GE+      Q++
Sbjct: 507 SKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALN--AALNYGEMDDQNAAQMI 566

Query: 606 LFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKGRTMMGCLDETRTLEYGQIFVHCS 665
           L   P  EP L   L      +  DL+   K+ V +   +MG +D T  L+  ++   C 
Sbjct: 567 LVGIPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEV---CV 626

Query: 666 VPRRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDVKVLHHMVD----CVVFPQNGKRP 725
           +          ++G+V+V +NP LH GD+ +L A  VK L   V      V FPQ G R 
Sbjct: 627 ILESGQ-----ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRS 686

Query: 726 HPNECSGSDLDGDLYFVCWDPE-LTCIKPVKP-MSYEP--------APTIQLDHDVKIEE 785
             +E +G D DGD+YF+  +PE L   KP +P +S  P        AP+     +++ E 
Sbjct: 687 LGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEEL 746

Query: 786 VQEYL-ANYMVNDSLGAIANAHTIFADK---------EPKKAMSAECIKLAKLFFIAVDF 845
            + +L A +  ++ +G  A++     D+         E K  M  + ++L  +++ A+D 
Sbjct: 747 FEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDA 806

Query: 846 PKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLGKLFRGVK-------DVSSDVNTL 852
           PK G    LP  L+   +P +M++  K  + S+ +LG +F  VK         SS+++ L
Sbjct: 807 PKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVKSQTTEEPSPSSEISKL 857

[Close]
BLAST of Cla97C01G006770 vs. TAIR10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-23
Identity = 147/610 (24.10%), Postives = 249/610 (40.82%), Query Frame = 0 

Query: 446  SKTLAKKVAEKCGLINHTPSAFQIRYAGY--KGVVAIDPTL-KKKLSLRKSMLKY----- 505
            SK L  +    CG        F+I Y GY  KG    +  L  + + +R SM+K      
Sbjct: 434  SKNLNFEGQGPCGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRT 493

Query: 506  ---ISLDTQLDVLVWSK-YQPCFLNRQVINLLSTLGIKDHVFVKKQKKAIYQLDSILKDP 565
               +S    L+V+  S   +   L+R ++ LLS  G+ +  F+   +  + +  +I    
Sbjct: 494  LSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSE 553

Query: 566  SKALEMLELMSPGEVTGILKQLLLFYKPNKEPFLNMMLQTFRADKLLDLRTKAKIFVPKG 625
              A +        + T     ++L   P  EP+L   L      +   L+   +  + + 
Sbjct: 554  RAAFKAAINYGDDQYTA---DMILVGIPLDEPYLKDRLSYLLKTERNALKA-GRFPIDES 613

Query: 626  RTMMGCLDETRTLEYGQIFVHCSVPRRSSESNFVVTGKVIVAKNPCLHPGDVRVLNAVDV 685
              +MG +D T  L+  +I   C +          ++G V+V +NP LH GD+ VL A  V
Sbjct: 614  YYIMGTVDPTGELKENEI---CVILHSGQ-----ISGDVLVYRNPGLHFGDIHVLKATYV 673

Query: 686  KVLHHMVD----CVVFPQNGKRPHPNECSGSDLDGDLYFVCWDPE-LTCIKPVKPMSYEP 745
            K L   V      V FPQ G R   +E +G D DGD+YF+  +P+ L   KP +P     
Sbjct: 674  KALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSS 733

Query: 746  APTI----QLDHDVKIEEVQEYL------ANYMVNDSLGAIANAHTIFAD---------K 805
             P+     +   ++  EE++E L      A +   D +G  A+      D          
Sbjct: 734  KPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESA 793

Query: 806  EPKKAMSAECIKLAKLFFIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYVSSGVLG 865
            + K       +KL  +++ A+D PK G   +LP +L +  +P +M++  K  + S+ +LG
Sbjct: 794  KEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILG 853

Query: 866  KLFRGVKDVSSDVNTLEIFNREVATKCYDPDMEVDGFEKYLRDAFDYKTRYDFKLGNLMD 925
             +F    D     N  E    E++   Y  D  V   + ++     +   Y  ++   M 
Sbjct: 854  LIF----DTVDSHNAEEPPPSEISKLWYFEDEPVP--KSHMDKFTSWYENYRSEMSQAM- 913

Query: 926  YYGIKTEPELVSGNILRMGKSFDKRNDLEQINCAMKSLRKEVRAWFNEKGSKSTYNNNKD 985
                             M     KRN L   N  ++  +++        G+    ++NK 
Sbjct: 914  -----------------METDKVKRNQL--TNEVIQRYKQDF------YGAAGFEDSNKS 973

Query: 986  EDEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADK-LIQIKREKTSLMNFSP 1019
             +E Y +A A Y+V Y  DY     EG+ +    +F W VA   L +   +KT   +   
Sbjct: 974  LEELYPQALALYNVVY--DY--AIQEGVAK---CTFAWNVAGPVLCKFYLKKTKDKSVVA 992

The following BLAST results are available for this feature:
BLAST of Cla97C01G006770 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51474.10.0e+0084.87hypothetical protein Csa_5G564290 [Cucumis sativus][more]
XP_011655453.10.0e+0084.87PREDICTED: probable RNA-dependent RNA polymerase 1 [Cucumis sativus][more]
AOW73471.10.0e+0084.87RNA-dependent RNA polymerase 1c2, partial [Cucumis sativus][more]
ALM88235.10.0e+0085.11RNA-dependent RNA polymerase 1c [Cucumis sativus][more]
ADN33705.10.0e+0083.37RNA-dependent RNA polymerase [Cucumis melo subsp. melo][more]
BLAST of Cla97C01G006770 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1D8RK46|A0A1D8RK46_CUCSA0.0e+0084.87RNA-dependent RNA polymerase (Fragment) OS=Cucumis sativus OX=3659 GN=RDR1c2 PE=... [more]
tr|A0A0A0KRH3|A0A0A0KRH3_CUCSA0.0e+0084.87RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G564290 PE=3 SV=... [more]
tr|A0A0S1YCZ4|A0A0S1YCZ4_CUCSA0.0e+0085.11RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1c PE=2 SV=1[more]
tr|E5GB63|E5GB63_CUCME0.0e+0083.37RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|A0A1S3AV70|A0A1S3AV70_CUCME0.0e+0085.71RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103483034 PE=3 SV=1[more]
BLAST of Cla97C01G006770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LQV2|RDR1_ARATH0.0e+0058.51RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1[more]
sp|Q0DXS3|RDR1_ORYSJ2.0e-26160.27Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q7XM31|RDR2_ORYSJ1.5e-20541.41Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|O82504|RDR2_ARATH1.9e-20039.38RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1[more]
sp|Q9SG02|RDR6_ARATH7.9e-16235.90RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1[more]
BLAST of Cla97C01G006770 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14790.10.0e+0058.51RNA-dependent RNA polymerase 1[more]
AT4G11130.11.1e-20139.38RNA-dependent RNA polymerase 2[more]
AT3G49500.14.4e-16335.90RNA-dependent RNA polymerase 6[more]
AT2G19930.11.7e-2626.95RNA-dependent RNA polymerase family protein[more]
AT2G19910.11.0e-2324.10RNA-dependent RNA polymerase family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed RNA polymerase activity
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006952 defense response
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0000165 MAPK cascade
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0060148 positive regulation of posttranscriptional gene silencing
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0051707 response to other organism
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009617 response to bacterium
biological_process GO:0009615 response to virus
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0010025 wax biosynthetic process
biological_process GO:0001172 transcription, RNA-templated
biological_process GO:0007165 signal transduction
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0071310 cellular response to organic substance
biological_process GO:0010468 regulation of gene expression
biological_process GO:0045087 innate immune response
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0031347 regulation of defense response
cellular_component GO:0031379 RNA-directed RNA polymerase complex
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003968 RNA-directed RNA polymerase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G006770.1Cla97C01G006770.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 917..937
NoneNo IPR availablePANTHERPTHR23079:SF1RNA-DEPENDENT RNA POLYMERASE FAMILYcoord: 4..1002
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 273..835
e-value: 3.0E-182
score: 607.3
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 4..1002

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G006770Cla003946Watermelon (97103) v1wmwmbB236
Cla97C01G006770Csa5G564290Cucumber (Chinese Long) v2cuwmbB344
Cla97C01G006770Csa5G544050Cucumber (Chinese Long) v2cuwmbB340
Cla97C01G006770MELO3C005284Melon (DHL92) v3.5.1mewmbB009
Cla97C01G006770ClCG01G006450Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G006770CSPI05G18660Wild cucumber (PI 183967)cpiwmbB356
Cla97C01G006770CSPI05G19310Wild cucumber (PI 183967)cpiwmbB358
Cla97C01G006770Cucsa.012120Cucumber (Gy14) v1cgywmbB343
Cla97C01G006770Cucsa.280130Cucumber (Gy14) v1cgywmbB485
Cla97C01G006770Lsi09G006800Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G006770CsGy5G018850Cucumber (Gy14) v2cgybwmbB327
Cla97C01G006770CsGy5G018660Cucumber (Gy14) v2cgybwmbB323
Cla97C01G006770MELO3C005284.2Melon (DHL92) v3.6.1medwmbB007
Cla97C01G006770MELO3C005257.2Melon (DHL92) v3.6.1medwmbB008
Cla97C01G006770Carg25244Silver-seed gourdcarwmbB0919
Cla97C01G006770CsaV3_5G028230Cucumber (Chinese Long) v3cucwmbB359
Cla97C01G006770CsaV3_5G027970Cucumber (Chinese Long) v3cucwmbB355
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G006770Silver-seed gourdcarwmbB0451
Cla97C01G006770Silver-seed gourdcarwmbB1002
Cla97C01G006770Cucurbita maxima (Rimu)cmawmbB286
Cla97C01G006770Cucurbita maxima (Rimu)cmawmbB705
Cla97C01G006770Cucurbita maxima (Rimu)cmawmbB709
Cla97C01G006770Cucurbita maxima (Rimu)cmawmbB710
Cla97C01G006770Cucurbita moschata (Rifu)cmowmbB268
Cla97C01G006770Cucurbita moschata (Rifu)cmowmbB676
Cla97C01G006770Cucurbita moschata (Rifu)cmowmbB679
Cla97C01G006770Cucurbita moschata (Rifu)cmowmbB681
Cla97C01G006770Wax gourdwgowmbB054