BLAST of MELO3C005284.2 vs. NCBI nr
Match:
ADN33705.1 (RNA-dependent RNA polymerase [Cucumis melo subsp. melo])
HSP 1 Score: 2149.4 bits (5568), Expect = 0.0e+00
Identity = 1060/1137 (93.23%), Postives = 1091/1137 (95.95%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
M +TIEIYGF P+VTVDEVKEFLENHTGDGTVSTVRISKPKD+K RFTSVTVRFKSKLAA
Sbjct: 1 MEKTIEIYGFGPKVTVDEVKEFLENHTGDGTVSTVRISKPKDDKTRFTSVTVRFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPEMERMEDVKGQLGSMISKDKMRVIW 148
EYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPEMERMEDVKGQLGSMISKDKMRVIW
Sbjct: 61 EYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPEMERMEDVKGQLGSMISKDKMRVIW 120
Query: 149 EGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQMQG-- 208
EGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQ+
Sbjct: 121 EGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQVSSFF 180
Query: 209 -------------------APRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQS 268
APRIFRKTPSSSSS LYSNESNSFRWIRDVDFTPSSCIGQS
Sbjct: 181 LXXXXXXXXXXXXXXLQCRAPRIFRKTPSSSSSPLYSNESNSFRWIRDVDFTPSSCIGQS 240
Query: 269 FTLCLQFSPSHHLPPFFQTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKI 328
FTLCLQFSPSHHLPPFFQTLVGYKVTY PFILRKGSSFVSNSNLVPIITPPQAFDISYKI
Sbjct: 241 FTLCLQFSPSHHLPPFFQTLVGYKVTYDPFILRKGSSFVSNSNLVPIITPPQAFDISYKI 300
Query: 329 LFKINALLQRGYLSGPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQ 388
LFKINALLQRGYLSGPTLDDEFF+LVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQ
Sbjct: 301 LFKINALLQRGYLSGPTLDDEFFRLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQ 360
Query: 389 YLSFYVSNQLPWKPNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFL 448
YLS+YVSNQLPWKPN+SLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFI DIDNFL
Sbjct: 361 YLSYYVSNQLPWKPNVSLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIDDIDNFL 420
Query: 449 RVSFVDEELDKLHSIDLAPRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS 508
RVSFVDEELDKLHSIDLAPRSSSPEN+T RTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS
Sbjct: 421 RVSFVDEELDKLHSIDLAPRSSSPENNT-RTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS 480
Query: 509 QLRENSFWMFASREGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIE 568
QLRENSFWMFASR+GLSAADIREWMGDFRQIRNVAKYA RLGQSFGSSRKTLCV+EHEIE
Sbjct: 481 QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 540
Query: 569 VIPDVEVERKNVMYCFSDGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDP 628
VIPDVEVERKN+MYCFSDGIGKISKTLAKKVA+KCGL HTPSAFQIRYAGYKGVVAIDP
Sbjct: 541 VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 600
Query: 629 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEA 688
TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEA
Sbjct: 601 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 660
Query: 689 IDQLDSILEDQSRALEVLELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDL 748
IDQLDSILED SRALEVLELMSPGEMTSILK+LLSFYMPNEEPFLNMML TFRANKLLDL
Sbjct: 661 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 720
Query: 749 KTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 808
KTKSRIFVP+GRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP
Sbjct: 721 KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 780
Query: 809 GDVRLLDAIDVKALHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 868
GDVRLLDAIDVKALHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK
Sbjct: 781 GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 840
Query: 869 PMSYKPAPTIQLDHDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKL 928
PMSY+PAP+IQLDHDVTIEEVQK+FANYMVNDGLGAIANAHTVFADKN KKAMSAECIKL
Sbjct: 841 PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 900
Query: 929 AKLFSIAVDFSKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 988
AKLFSIAVDF KTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 901 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 960
Query: 989 NSFEIFTREVATRCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSG 1048
N+FEIFT+EVAT+CYDPDMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 961 NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1020
Query: 1049 NILKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENENKSRYDDIK-DEYARASAWYCVT 1108
NILKMAKSFDKRNDLEQI FAMKSLRKEVRSWFNENE+K Y+DI+ DEYARASAWYCVT
Sbjct: 1021 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDIEDDEYARASAWYCVT 1080
Query: 1109 YHPDYWGCYNEGKQRDHFLSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDGVNL 1144
YHPDYWG YNEG QRDHFLSFPWCVADKLI+IKREKMSLRNSSPMSSL +NFDG++L
Sbjct: 1081 YHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDGMSL 1136
BLAST of MELO3C005284.2 vs. NCBI nr
Match:
ALM88235.1 (RNA-dependent RNA polymerase 1c [Cucumis sativus])
HSP 1 Score: 2106.3 bits (5456), Expect = 0.0e+00
Identity = 1030/1112 (92.63%), Postives = 1070/1112 (96.22%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYIEHALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSSPENS +RTRVYDRV+S+LKNGIVIG+KKFEFLAFSASQLRENSFWMFASREGLS
Sbjct: 421 APRSSSPENS-QRTRVYDRVISILKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN+MYCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGL SHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVLLWSKYQPCFLNRQVI+LLST+GI D+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPN+EPFLNMMLRTFRA+KLLDL+TKSRIFVPKGRTMMGC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDET+TLEYGQVFVHCS+PGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM
Sbjct: 721 LDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYFVCWD+ELTCIKQVKPMSYKPAPTIQLDHDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAPTIQLDHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEEVQ++FANYMVNDGLGAIANAHTVFADKN KKAMSAECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+K TYVSNGVLGKLFRGVKDVSSDV++FEIFTREVAT+CYDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDVSAFEIFTREVATKCYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKR DLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRKDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
I FAMKSLRKEVR WFNENE+KS YDDI+DEYARASAWYCVTYHPDYWGCYNEG +RDHF
Sbjct: 1021 IAFAMKSLRKEVRFWFNENESKSTYDDIQDEYARASAWYCVTYHPDYWGCYNEGTKRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLH 1137
LSFPWCVADKLI+IKREKMS+RNSSP SSLLH
Sbjct: 1081 LSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111
BLAST of MELO3C005284.2 vs. NCBI nr
Match:
KGN51474.1 (hypothetical protein Csa_5G564290 [Cucumis sativus])
HSP 1 Score: 2094.7 bits (5426), Expect = 0.0e+00
Identity = 1022/1116 (91.58%), Postives = 1070/1116 (95.88%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK K T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVAKETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYI+HALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSS ENS +RTRVYDRVVSVLKNGIVIG+KKFEFLAFSASQLRENSFWMFASREGLS
Sbjct: 421 APRSSSHENS-QRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN+MYCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPTS+KKLSLR SMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVL WSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVP+GRTM+GC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHPGDVR+LDA+DVKALHHM
Sbjct: 721 LDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIKQVKPM+Y+PAPTIQL+HDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEE+Q++FANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDVN+FEIFTREVAT+ YDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGN+LKMAKSFDKRNDLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
ITFAMKSLRKEVRSWFNENE+K YDDI+DEYA+ASAWY VTYHPDYWGCYNEG QRDHF
Sbjct: 1021 ITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDG 1141
LSFPWCVADKLI+IKR+KM+L+NS P+SSL HNFDG
Sbjct: 1081 LSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115
BLAST of MELO3C005284.2 vs. NCBI nr
Match:
XP_011655453.1 (PREDICTED: probable RNA-dependent RNA polymerase 1 [Cucumis sativus])
HSP 1 Score: 2094.7 bits (5426), Expect = 0.0e+00
Identity = 1022/1116 (91.58%), Postives = 1070/1116 (95.88%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK K T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVAKETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYI+HALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSS ENS +RTRVYDRVVSVLKNGIVIG+KKFEFLAFSASQLRENSFWMFASREGLS
Sbjct: 421 APRSSSHENS-QRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN+MYCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPTS+KKLSLR SMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVL WSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVP+GRTM+GC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHPGDVR+LDA+DVKALHHM
Sbjct: 721 LDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIKQVKPM+Y+PAPTIQL+HDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEE+Q++FANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDVN+FEIFTREVAT+ YDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGN+LKMAKSFDKRNDLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
ITFAMKSLRKEVRSWFNENE+K YDDI+DEYA+ASAWY VTYHPDYWGCYNEG QRDHF
Sbjct: 1021 ITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDG 1141
LSFPWCVADKLI+IKR+KM+L+NS P+SSL HNFDG
Sbjct: 1081 LSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115
BLAST of MELO3C005284.2 vs. NCBI nr
Match:
AOW73471.1 (RNA-dependent RNA polymerase 1c2, partial [Cucumis sativus])
HSP 1 Score: 2090.1 bits (5414), Expect = 0.0e+00
Identity = 1019/1116 (91.31%), Postives = 1069/1116 (95.79%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYI+HALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSS ENS +RTRVYDRVVSVLKNGIVIG+KKFEFLAFSASQL+ENSFWMFASREGLS
Sbjct: 421 APRSSSHENS-QRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLKENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN++YCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIIYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPTS+KKLSLR SMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVL WSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVP+GRTM+GC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHPGDVR+LDA+DVKALHHM
Sbjct: 721 LDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIKQVKPM+Y+PAPTIQL+HDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEE+Q++FANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDVN+FEIFTREVAT+ YDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGN+LKMAKSFDKRNDLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
ITFAMKSLRKEVRSWFNENE+K YDDI+DEYA+ASAWY VTYHPDYWGCYNEG QRDHF
Sbjct: 1021 ITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDG 1141
LSFPWCVADKLI+IKR+KM+L+NS P+SSL HNFDG
Sbjct: 1081 LSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115
BLAST of MELO3C005284.2 vs. TAIR10
Match:
AT1G14790.1 (RNA-dependent RNA polymerase 1)
HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 621/1107 (56.10%), Postives = 792/1107 (71.54%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TI+++GF V+ +EVK+FLE TG GTV +++ +PK R ++ V+F S+
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAI-VQFTSERHT 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEKK-ATSGGPEMERMEDVKGQLGSMISKDKMRVI 148
I+ T ++L++ SYLKA EVE+ + + +K G +S K +
Sbjct: 61 RLII---TAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 120
Query: 149 WEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQMQGA 208
W + V FG G+RKL F S+ DY++EL +ENI ++ P + SKF +IQ+ GA
Sbjct: 121 WSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGA 180
Query: 209 PRIFRKTPSSSS-----SSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPP 268
P+IF K + YS+ S+ +WIR DFT SSCIGQS CL+ ++P
Sbjct: 181 PKIFEKEDQPINLLFGIMDFYSDGSDE-QWIRTTDFTSSSCIGQSTAFCLELPVHLNVPD 240
Query: 269 FFQTLVGYKVTYA-PFILRKGSSFVSNSN-LVPIITPPQAFDISYKILFKINALLQRGYL 328
F + Y A F++ GSS+ SN+N LVP++ PP F + ++ILFK+N L+Q L
Sbjct: 241 FRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACL 300
Query: 329 SGPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWK 388
SGP LD +F++L++ ++ I+H LEKLF+L ECCY+P WL+D+Y + +LP
Sbjct: 301 SGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLS 360
Query: 389 PNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLH 448
P ISLDDGLVY++RVQ+TP +VYF GPE N+SNRV+R + I+NFLRVSFVDE+L+K+
Sbjct: 361 PTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVR 420
Query: 449 SIDLAPRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASR 508
S+DL+PRSS + +RT++YDR+ SVL++GIVIGDKKFEFLAFS+SQLRENS WMFA
Sbjct: 421 SMDLSPRSS----TQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPI 480
Query: 509 EGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVM 568
+ ++AA IR WMGDF IRNVAKYA RLGQSF SSR+TL V EIEVIPDVE+
Sbjct: 481 DRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTR 540
Query: 569 YCFSDGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSML 628
Y FSDGIGKIS A+KVA KCGL +PSAFQIRY GYKGVVA+DP S KKLSLRKSM
Sbjct: 541 YVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMS 600
Query: 629 KYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSR 688
K+ S +T+LDVL WSKYQPC++NRQ+I+LLST+G+ D+VF +KQ+E +D+LD+IL
Sbjct: 601 KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLE 660
Query: 689 ALEVLELMSPGEMTSILKDL-LSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGR 748
A E L LM+PGE T+ILK L L Y P+ EPFL+MML+ FRA+KLL+L+TK+RIF+ GR
Sbjct: 661 AHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGR 720
Query: 749 TMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVK 808
+MMGCLDETRTLEYGQV V S P R F++ G VVVAKNPCLHPGDVR+L A++V
Sbjct: 721 SMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNVP 780
Query: 809 ALHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQL 868
AL+HMVDCVVFPQ G RPHPNECSGSDLDGD+YFVCWD EL + +PM Y P PT L
Sbjct: 781 ALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQIL 840
Query: 869 DHDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSK 928
DHDVTIEEV+++FANY+VND LG IANAHT FADK P KA S CI+LAK FS AVDF K
Sbjct: 841 DHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPK 900
Query: 929 TGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVAT 988
TGV A +P++L V EYPDFM+KPDKPTY S V+GKLFR VK+ + + S + FT +VA+
Sbjct: 901 TGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVAS 960
Query: 989 RCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKR 1048
+ YD DMEVDGFE+Y+ EAF+ K YDFKLGNLMDYYGIKTE E++SG I++M+KSF KR
Sbjct: 961 KSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKR 1020
Query: 1049 NDLEQITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGK 1108
D E I A+++LRKE S FN +E + ++E A+ASAWY VTYH YWG YNEG
Sbjct: 1021 RDAESIGRAVRALRKETLSLFNASEEE------ENESAKASAWYHVTYHSSYWGLYNEGL 1080
Query: 1109 QRDHFLSFPWCVADKLIEIKREKMSLR 1127
RDHFLSF WCV DKL+ IK+ + R
Sbjct: 1081 NRDHFLSFAWCVYDKLVRIKKTNLGRR 1091
BLAST of MELO3C005284.2 vs. TAIR10
Match:
AT4G11130.1 (RNA-dependent RNA polymerase 2)
HSP 1 Score: 739.6 bits (1908), Expect = 3.0e-213
Identity = 442/1138 (38.84%), Postives = 648/1138 (56.94%), Query Frame = 0
Query: 32 TIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRIS------KPKD-EKARFTSVTVRFKS 91
T++I + DE+ FLE H G+ TV + I KP+D + +FT++ V+ ++
Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70
Query: 92 KLAAEYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPE-MERMEDVKGQLGSMISKDK 151
+L + + KL F++ L+ E + +R++D+ +G S +K
Sbjct: 71 QL---------LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK 130
Query: 152 MRVI---WEGEK-WNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKF 211
W+G + W + R++ F++ D YK+E+ FE+I+ C S+
Sbjct: 131 RFCALEKWDGVRCWIL---TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEI 190
Query: 212 --FLIQMQGAPRIFRK------TPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLC 271
FL++++ P++F++ T S + E F WIR DF+ S IG S C
Sbjct: 191 DAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFC 250
Query: 272 LQFSPSHHLPPFFQTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPP-QAFDISYKILFK 331
L+ + F L Y+ G +F S + +VP++ + Y+ILF+
Sbjct: 251 LEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQ 310
Query: 332 INALLQRGYLS-GPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYL 391
+NAL+ +S D E +++ + L+KL CY P ++K Q
Sbjct: 311 LNALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQ 370
Query: 392 SFYVSNQLPWKPNIS----LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDN 451
S V ++ P + + ++ R +TP K+Y GPE +N VV+ F + +
Sbjct: 371 S--VVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSD 430
Query: 452 FLRVSFVDEELDKLHSIDLAPRSSSPE-NSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAF 511
F+RV+FV+E+ KL + L+ S RT +Y+RV+S+L GI +G K+FEFLAF
Sbjct: 431 FMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAF 490
Query: 512 SASQLRENSFWMFASREGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEH 571
SASQLR NS WMFAS E + A DIREWMG FR+IR+++K A R+GQ F +SR+TL V
Sbjct: 491 SASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQ 550
Query: 572 EIEVIPDVEVERKNVMYCFSDGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVA 631
++E IPD+EV YCFSDGIGKIS AK+VA+KCGL SH PSAFQIRY GYKGV+A
Sbjct: 551 DVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIA 610
Query: 632 IDPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQ 691
+D +S +KLSLR SMLK+ S + L+V W++ PCFLNR++I LLST+GI D +F Q
Sbjct: 611 VDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQ 670
Query: 692 KEAIDQLDSILEDQSRALEVLELMSPGEMTSIL-KDLLSFYMPNEEPFLNMMLRTFRANK 751
+ L ++LED+ AL VL+ +S ++L K LL Y P+ EP+L+MMLR ++
Sbjct: 671 AVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQ 730
Query: 752 LLDLKTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSVP------------GRSSEGNF 811
L +LK++ RI VPKGR ++GC+DE LEYGQV+V ++ + E
Sbjct: 731 LSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETS 790
Query: 812 VVKGKVVVAKNPCLHPGDVRLLDAIDVKALHH--MVDCVVFPQNGKRPHPNECSGSDLDG 871
VV GKVVV KNPCLHPGD+R+LDAI +DC++FPQ G+RPHPNECSG DLDG
Sbjct: 791 VVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDG 850
Query: 872 DLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVTIEEVQKHFANYMVNDGLGAIANAHT 931
D +FV WD ++ + PM Y + +DHDVT+EE+ K F +YM++D LG I+ AH
Sbjct: 851 DQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHL 910
Query: 932 VFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPANLPRNLRVHEYPDFMDKPDKPTYVS 991
V AD++P+KA S +C++LA L S AVDF+KTG PA +P L+ E+PDF+++ +KPTY+S
Sbjct: 911 VHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYIS 970
Query: 992 NGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDPDMEVDGFEKYLREAFHYKTKYDFKL 1051
V GKL+R VK S + + T YD +E GFE ++ A ++ Y KL
Sbjct: 971 ESVFGKLYRAVK---SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKL 1030
Query: 1052 GNLMDYYGIKTEPELVSGNILKMAKSFDKRND------LEQITFAMKSLRKEVRSWFNEN 1111
+LM YYG E E+++G ILK + + R++ ++IT ++K L KE WF ++
Sbjct: 1031 TSLMIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKS 1090
Query: 1112 ENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHFLSFPWCVADKLIEIKRE 1122
+D + + ASAWY VTY+P N ++ FLSFPW V D L++IK E
Sbjct: 1091 -----CEDEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1116
BLAST of MELO3C005284.2 vs. TAIR10
Match:
AT3G49500.1 (RNA-dependent RNA polymerase 6)
HSP 1 Score: 573.2 bits (1476), Expect = 3.7e-163
Identity = 388/1069 (36.30%), Postives = 567/1069 (53.04%), Query Frame = 0
Query: 134 QLGSMISKDKMRVIW--EGEKWNVEFGNGVRKLWFYLSYEVD------------DYKMEL 193
++G+++S+D V W EG + V+ + K F S DYK+EL
Sbjct: 138 EIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLEL 197
Query: 194 CFENILSVEFRCPLNQPSKFFLIQMQGAPRIFRKTPSSSSSSLYSNE--SNSFRWIRDVD 253
+I +V L+ ++Q+ +PR++ +T + + WIR D
Sbjct: 198 LVRDIQTVRQYKTLH--GFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTD 257
Query: 254 FTPSSCIGQSFTLCLQFSPSHHLPPFFQTLVGY---------KVTYAPFILRKGSSFVSN 313
FT IG+ + + SP + +T + Y +V + P I +
Sbjct: 258 FTQVGAIGRCHSYRVLISPRYENK--LRTALDYFRMRRVQEERVRWPPRIRNEPCFGEPV 317
Query: 314 SNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTLDDEFFQLVDSSRFHPDYIEHA-L 373
S+ I + IS++I+F +N++L RG + L + FF L+ R P + A L
Sbjct: 318 SDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL---RNQPKDVNIASL 377
Query: 374 EKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNISLDDGLVYVHRVQITPLKVYFCGP 433
+ L K + K LK + ++ + + + + R+ ITP + Y P
Sbjct: 378 KHLCTYKRPVFDAYKRLK--LVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPP 437
Query: 434 EANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL----AP--RSSSPENSTKRTRVY 493
E LSNRV+RR+ + FLRV+F+DE + ++S L AP + + + +++T V+
Sbjct: 438 EVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVF 497
Query: 494 DRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIREWMGDFRQIRNV 553
RV S+L +G + +K+ FLAFSA+QLR+ S W FA +DI+ WMG F+ +NV
Sbjct: 498 KRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNV 557
Query: 554 AKYATRLGQSFGSSRKTLCVEEHEIEV-IPDVEVERKNVMYCFSDGIGKISKTLAKKVAE 613
AK A R+G F S+ T+ V HE++ +PD+E Y FSDGIG I+ LA +V E
Sbjct: 558 AKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPDLADEVME 617
Query: 614 KCGL-ISHTPSAFQIRYAGYKGVVAIDPTSEK--KLSLRKSMLKYMSLDTQLDVLLWSKY 673
K L + ++P A+QIRYAG+KGVVA P+ +L+LR SM K+ S T L++ W+++
Sbjct: 618 KLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRF 677
Query: 674 QPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVLELMSPGEMTSIL 733
QP FLNRQ+I+LLS +G+ D +F Q+ + +L+ IL+D A EVL + +
Sbjct: 678 QPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAA 737
Query: 734 KDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCLDETRTLEYGQVF 793
L + + P EP L ML + R +L L+ KSRIFV GR +MGCLDE LE+GQ F
Sbjct: 738 IMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCF 797
Query: 794 VHCSVPGRSSEGNF---------------VVKGKVVVAKNPCLHPGDVRLLDAIDVKALH 853
+ S P S E F VVKG V +AKNPCLHPGDVR+L+A+DV LH
Sbjct: 798 IQVSKP--SIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLH 857
Query: 854 HMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSEL--TCIKQVKPMSYKPAPTIQLD 913
HM DC++FPQ G RPH NE SGSDLDGDLYFV WD +L K M Y A L
Sbjct: 858 HMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLG 917
Query: 914 HDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKT 973
V +++ FA + N+ LG I NAH V AD++ AM EC+ LA+L + AVDF KT
Sbjct: 918 RAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKT 977
Query: 974 GVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDV-SSDVNSFEIFTREVAT 1033
G ++P +L+ YPDFM K D TY SN +LG+L+R VK+V D + + + +
Sbjct: 978 GKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSA 1037
Query: 1034 RCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKR 1093
YD +E+ GFE + EA+ +K YD +L L+ Y ++ E E+V+G+I M K K+
Sbjct: 1038 IPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKK 1097
Query: 1094 ND--LEQITFAMKSLRKEVRSWFNE----NENKSRYDDIKDEYARASAWYCVTYHPDYWG 1135
E++ + SL+KE R F E +EN S + +ASAWY VTYHP++
Sbjct: 1098 QGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVK 1157
BLAST of MELO3C005284.2 vs. TAIR10
Match:
AT2G19920.1 (RNA-dependent RNA polymerase family protein)
HSP 1 Score: 113.2 bits (282), Expect = 1.0e-24
Identity = 159/668 (23.80%), Postives = 271/668 (40.57%), Query Frame = 0
Query: 386 DDGLVYVHRVQITP-----LKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLH 445
D G + ++ + P LK YF ++V +GD DN L V F D+L
Sbjct: 209 DSGKTHYYQCHVAPDGSYRLKGYFLENTGTHLHKV----LGD-DNVLTVRF-----DQL- 268
Query: 446 SIDLAPRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAF----SASQLRENS--- 505
P+ ST Y + + KNGI++G ++++F F A + + NS
Sbjct: 269 ----------PKESTYCDNPYSKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQ 328
Query: 506 FWMFASREG------------LSAADIREWMGDFRQIRNV---AKYATRLGQSFGSSRKT 565
+ R G LS I E F + + A Y R ++K
Sbjct: 329 VKCYFIRTGSTASSDMENPYILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKK- 388
Query: 566 LCVEEHEIEV--IPDVE---------VERKNVMYCFSDGIGKISKTLAK----------- 625
L V+ EI V I D+ +++ SDG G IS+ LA+
Sbjct: 389 LEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKS 448
Query: 626 ----KVAEKCGLISHTPSAFQIRY----AGYKGVVAIDPT-SEKKLSLRKSMLKY----- 685
+ C + P QIR + KG+ ++ + + +R SM+K
Sbjct: 449 MRSNNIQGTC--VQEPPLLIQIRMFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKN 508
Query: 686 ---MSLDTQLDVLLWSK-YQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQ 745
S L+V+ S + L++ +++LLS G+ ++ F+ +++ +I
Sbjct: 509 LSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKV 568
Query: 746 SRALEVLELMSPGEMTSILKDLLSFYM---PNEEPFLNMMLRTFRANKLLDLKTKSRIFV 805
A + + G M K+ L M P +EP+L L + DLK ++ +
Sbjct: 569 RAAGKA--ALHYGNMDD--KNALQMIMAGIPLDEPYLKHYLSKLLKLEKDDLKA-GKLPI 628
Query: 806 PKGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDA 865
+ +MG +D T L+ +V V+V +NP LH GD+ +L A
Sbjct: 629 DESYYLMGTVDPTGELKEDEV------------SGLAKSQDVLVYRNPGLHFGDIHILKA 688
Query: 866 IDVKALHHMVD----CVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKP--- 925
VK+L V V FPQ G R +E +G D DGD+YF+ + +L ++ KP
Sbjct: 689 TYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKL--LEHYKPSEP 748
Query: 926 -MSYKPAPTI---QLDHDVTIEEVQKHFANYMVNDGLG-------------AIANAHTVF 958
+S P I + +++ E++++ + G AI +
Sbjct: 749 WVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTL 808
BLAST of MELO3C005284.2 vs. TAIR10
Match:
AT2G19930.1 (RNA-dependent RNA polymerase family protein)
HSP 1 Score: 109.0 bits (271), Expect = 2.0e-23
Identity = 124/470 (26.38%), Postives = 208/470 (44.26%), Query Frame = 0
Query: 553 EVERKNVMYCF-SDGIGKISKTLAK---------------KVAEKCGLISHTPSAFQIRY 612
+V KN C SDG G IS+ LA+ + E C F++ Y
Sbjct: 387 DVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFY 446
Query: 613 AGY--KGVVAID-PTSEKKLSLRKSMLKY--------MSLDTQLDVLLWSK-YQPCFLNR 672
GY KG ++ + + +R SM+K S L+V+ S + L++
Sbjct: 447 DGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSK 506
Query: 673 QVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVLELMSPGEM-TSILKDLLSF 732
+++LLS GI + F+ +++ SI ++ AL ++ GEM ++
Sbjct: 507 NLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNA--ALNYGEMDDQNAAQMILV 566
Query: 733 YMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSVP 792
+P +EP L L + DLK ++ V + +MG +D T L+ +V V
Sbjct: 567 GIPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILE-- 626
Query: 793 GRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMVD----CVVFPQNGKRPHP 852
+ + G+V+V +NP LH GD+ +L A VKAL V V FPQ G R
Sbjct: 627 ------SGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLG 686
Query: 853 NECSGSDLDGDLYFVCWDSELTCIKQVKP----MSYKP--------APTIQLDHDVTIEE 912
+E +G D DGD+YF+ + EL ++ KP +S P AP+ QL + EE
Sbjct: 687 DEIAGGDFDGDMYFISRNPEL--LENFKPSEPWVSLTPPSKSNSGRAPS-QLSPEELEEE 746
Query: 913 VQKHF--ANYMVNDGLGAIANAHTVFADK---------NPKKAMSAECIKLAKLFSIAVD 967
+ + F A + ++ +G A++ D+ K M + ++L ++ A+D
Sbjct: 747 LFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALD 806
BLAST of MELO3C005284.2 vs. Swiss-Prot
Match:
sp|Q9LQV2|RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)
HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 621/1107 (56.10%), Postives = 792/1107 (71.54%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TI+++GF V+ +EVK+FLE TG GTV +++ +PK R ++ V+F S+
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAI-VQFTSERHT 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEKK-ATSGGPEMERMEDVKGQLGSMISKDKMRVI 148
I+ T ++L++ SYLKA EVE+ + + +K G +S K +
Sbjct: 61 RLII---TAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 120
Query: 149 WEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQMQGA 208
W + V FG G+RKL F S+ DY++EL +ENI ++ P + SKF +IQ+ GA
Sbjct: 121 WSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGA 180
Query: 209 PRIFRKTPSSSS-----SSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPP 268
P+IF K + YS+ S+ +WIR DFT SSCIGQS CL+ ++P
Sbjct: 181 PKIFEKEDQPINLLFGIMDFYSDGSDE-QWIRTTDFTSSSCIGQSTAFCLELPVHLNVPD 240
Query: 269 FFQTLVGYKVTYA-PFILRKGSSFVSNSN-LVPIITPPQAFDISYKILFKINALLQRGYL 328
F + Y A F++ GSS+ SN+N LVP++ PP F + ++ILFK+N L+Q L
Sbjct: 241 FRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACL 300
Query: 329 SGPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWK 388
SGP LD +F++L++ ++ I+H LEKLF+L ECCY+P WL+D+Y + +LP
Sbjct: 301 SGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLS 360
Query: 389 PNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLH 448
P ISLDDGLVY++RVQ+TP +VYF GPE N+SNRV+R + I+NFLRVSFVDE+L+K+
Sbjct: 361 PTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVR 420
Query: 449 SIDLAPRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASR 508
S+DL+PRSS + +RT++YDR+ SVL++GIVIGDKKFEFLAFS+SQLRENS WMFA
Sbjct: 421 SMDLSPRSS----TQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPI 480
Query: 509 EGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVM 568
+ ++AA IR WMGDF IRNVAKYA RLGQSF SSR+TL V EIEVIPDVE+
Sbjct: 481 DRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTR 540
Query: 569 YCFSDGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSML 628
Y FSDGIGKIS A+KVA KCGL +PSAFQIRY GYKGVVA+DP S KKLSLRKSM
Sbjct: 541 YVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMS 600
Query: 629 KYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSR 688
K+ S +T+LDVL WSKYQPC++NRQ+I+LLST+G+ D+VF +KQ+E +D+LD+IL
Sbjct: 601 KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLE 660
Query: 689 ALEVLELMSPGEMTSILKDL-LSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGR 748
A E L LM+PGE T+ILK L L Y P+ EPFL+MML+ FRA+KLL+L+TK+RIF+ GR
Sbjct: 661 AHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGR 720
Query: 749 TMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVK 808
+MMGCLDETRTLEYGQV V S P R F++ G VVVAKNPCLHPGDVR+L A++V
Sbjct: 721 SMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNVP 780
Query: 809 ALHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQL 868
AL+HMVDCVVFPQ G RPHPNECSGSDLDGD+YFVCWD EL + +PM Y P PT L
Sbjct: 781 ALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQIL 840
Query: 869 DHDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSK 928
DHDVTIEEV+++FANY+VND LG IANAHT FADK P KA S CI+LAK FS AVDF K
Sbjct: 841 DHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPK 900
Query: 929 TGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVAT 988
TGV A +P++L V EYPDFM+KPDKPTY S V+GKLFR VK+ + + S + FT +VA+
Sbjct: 901 TGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVAS 960
Query: 989 RCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKR 1048
+ YD DMEVDGFE+Y+ EAF+ K YDFKLGNLMDYYGIKTE E++SG I++M+KSF KR
Sbjct: 961 KSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKR 1020
Query: 1049 NDLEQITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGK 1108
D E I A+++LRKE S FN +E + ++E A+ASAWY VTYH YWG YNEG
Sbjct: 1021 RDAESIGRAVRALRKETLSLFNASEEE------ENESAKASAWYHVTYHSSYWGLYNEGL 1080
Query: 1109 QRDHFLSFPWCVADKLIEIKREKMSLR 1127
RDHFLSF WCV DKL+ IK+ + R
Sbjct: 1081 NRDHFLSFAWCVYDKLVRIKKTNLGRR 1091
BLAST of MELO3C005284.2 vs. Swiss-Prot
Match:
sp|Q0DXS3|RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)
HSP 1 Score: 910.2 bits (2351), Expect = 2.3e-263
Identity = 451/737 (61.19%), Postives = 560/737 (75.98%), Query Frame = 0
Query: 402 VYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDLAPRSSSPENSTKRTRVY 461
VYF GPE N+SNRVVR F DI+NFLR+SFVDE+ +KL + DL+PRS+S ++ RT +Y
Sbjct: 9 VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDA-NRTALY 68
Query: 462 DRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIREWMGDFRQIRNV 521
RV+SVL +GI IG K FEFLAFS+SQLR+NS WMFASR+GL+A+DIR WMGDFR IRNV
Sbjct: 69 KRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNV 128
Query: 522 AKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFSDGIGKISKTLAKKVAEK 581
AKYA RLGQSF SS +TL V+++E+E I D+ + + FSDGIGKIS A +VA K
Sbjct: 129 AKYAARLGQSFSSSTETLKVQKYEVEEISDI---KNGTQHVFSDGIGKISSAFANEVAMK 188
Query: 582 CGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCF 641
C L PSAFQIRY GYKGVVA+DPTS KLSLRKSMLK+ S + +DVL +SKYQP F
Sbjct: 189 CNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGF 248
Query: 642 LNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVLELMSPGEMTSILKD-L 701
LNRQ+I+LLST+G+ D+VF +KQ+EA++QL+ ++ D A+E +ELM GE+T+ +K+ L
Sbjct: 249 LNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELL 308
Query: 702 LSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHC 761
L Y P++EP+L+M+L+TFRA+KLL+LKTKSRI +PKGR MMGCLDETRTL+YGQVF+
Sbjct: 309 LCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIR- 368
Query: 762 SVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMVDCVVFPQNGKRPHPN 821
+ G + F V GKVV+AKNPCLHPGD+R+L A+DV LHHM +CVVFPQ G RPHPN
Sbjct: 369 ATSGVNDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHPN 428
Query: 822 ECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVTIEEVQKHFANYMVNDG 881
ECSGSDLDGD+YFV WD L + V PM Y PAPT LDHDVTIEEV+++F NY+VN+
Sbjct: 429 ECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNES 488
Query: 882 LGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPANLPRNLRVHEYPDFMD 941
LG IANAH VFADK KA S+ CI+LAKLFSIAVDF KTGVPA +P L V EYPDFM+
Sbjct: 489 LGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFME 548
Query: 942 KPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDPDMEVDGFEKYLREAFH 1001
K DK TY S GV+GKL+R +K + + FTREVA R YD DM VDG+E Y+ EA
Sbjct: 549 KLDKVTYESKGVIGKLYREIKKHTPHIKH---FTREVARRSYDTDMIVDGYEDYITEAMA 608
Query: 1002 YKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQITFAMKSLRKEVRSWF 1061
K +YDFKLGNLMD+YGIK+E E++SG ILKMAK+F K++D + I A++SLRKE RS F
Sbjct: 609 LKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRF 668
Query: 1062 NENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHFLSFPWCVADKLIEIKR 1121
+E A+ASAWY VTYHP++WGCYNEG +R HF+SFPWC+ +KL+ IK+
Sbjct: 669 SEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQ 728
Query: 1122 EKMSLRNSSPMSSLLHN 1138
+ +R P LHN
Sbjct: 729 RRKFVRKMQPELFSLHN 737
BLAST of MELO3C005284.2 vs. Swiss-Prot
Match:
sp|O82504|RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)
HSP 1 Score: 739.6 bits (1908), Expect = 5.3e-212
Identity = 442/1138 (38.84%), Postives = 648/1138 (56.94%), Query Frame = 0
Query: 32 TIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRIS------KPKD-EKARFTSVTVRFKS 91
T++I + DE+ FLE H G+ TV + I KP+D + +FT++ V+ ++
Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70
Query: 92 KLAAEYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPE-MERMEDVKGQLGSMISKDK 151
+L + + KL F++ L+ E + +R++D+ +G S +K
Sbjct: 71 QL---------LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK 130
Query: 152 MRVI---WEGEK-WNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKF 211
W+G + W + R++ F++ D YK+E+ FE+I+ C S+
Sbjct: 131 RFCALEKWDGVRCWIL---TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEI 190
Query: 212 --FLIQMQGAPRIFRK------TPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLC 271
FL++++ P++F++ T S + E F WIR DF+ S IG S C
Sbjct: 191 DAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFC 250
Query: 272 LQFSPSHHLPPFFQTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPP-QAFDISYKILFK 331
L+ + F L Y+ G +F S + +VP++ + Y+ILF+
Sbjct: 251 LEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQ 310
Query: 332 INALLQRGYLS-GPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYL 391
+NAL+ +S D E +++ + L+KL CY P ++K Q
Sbjct: 311 LNALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQ 370
Query: 392 SFYVSNQLPWKPNIS----LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDN 451
S V ++ P + + ++ R +TP K+Y GPE +N VV+ F + +
Sbjct: 371 S--VVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSD 430
Query: 452 FLRVSFVDEELDKLHSIDLAPRSSSPE-NSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAF 511
F+RV+FV+E+ KL + L+ S RT +Y+RV+S+L GI +G K+FEFLAF
Sbjct: 431 FMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAF 490
Query: 512 SASQLRENSFWMFASREGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEH 571
SASQLR NS WMFAS E + A DIREWMG FR+IR+++K A R+GQ F +SR+TL V
Sbjct: 491 SASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQ 550
Query: 572 EIEVIPDVEVERKNVMYCFSDGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVA 631
++E IPD+EV YCFSDGIGKIS AK+VA+KCGL SH PSAFQIRY GYKGV+A
Sbjct: 551 DVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIA 610
Query: 632 IDPTSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQ 691
+D +S +KLSLR SMLK+ S + L+V W++ PCFLNR++I LLST+GI D +F Q
Sbjct: 611 VDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQ 670
Query: 692 KEAIDQLDSILEDQSRALEVLELMSPGEMTSIL-KDLLSFYMPNEEPFLNMMLRTFRANK 751
+ L ++LED+ AL VL+ +S ++L K LL Y P+ EP+L+MMLR ++
Sbjct: 671 AVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQ 730
Query: 752 LLDLKTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSVP------------GRSSEGNF 811
L +LK++ RI VPKGR ++GC+DE LEYGQV+V ++ + E
Sbjct: 731 LSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETS 790
Query: 812 VVKGKVVVAKNPCLHPGDVRLLDAIDVKALHH--MVDCVVFPQNGKRPHPNECSGSDLDG 871
VV GKVVV KNPCLHPGD+R+LDAI +DC++FPQ G+RPHPNECSG DLDG
Sbjct: 791 VVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDG 850
Query: 872 DLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVTIEEVQKHFANYMVNDGLGAIANAHT 931
D +FV WD ++ + PM Y + +DHDVT+EE+ K F +YM++D LG I+ AH
Sbjct: 851 DQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHL 910
Query: 932 VFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPANLPRNLRVHEYPDFMDKPDKPTYVS 991
V AD++P+KA S +C++LA L S AVDF+KTG PA +P L+ E+PDF+++ +KPTY+S
Sbjct: 911 VHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYIS 970
Query: 992 NGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDPDMEVDGFEKYLREAFHYKTKYDFKL 1051
V GKL+R VK S + + T YD +E GFE ++ A ++ Y KL
Sbjct: 971 ESVFGKLYRAVK---SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKL 1030
Query: 1052 GNLMDYYGIKTEPELVSGNILKMAKSFDKRND------LEQITFAMKSLRKEVRSWFNEN 1111
+LM YYG E E+++G ILK + + R++ ++IT ++K L KE WF ++
Sbjct: 1031 TSLMIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKS 1090
Query: 1112 ENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHFLSFPWCVADKLIEIKRE 1122
+D + + ASAWY VTY+P N ++ FLSFPW V D L++IK E
Sbjct: 1091 -----CEDEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1116
BLAST of MELO3C005284.2 vs. Swiss-Prot
Match:
sp|Q7XM31|RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)
HSP 1 Score: 732.3 bits (1889), Expect = 8.5e-210
Identity = 414/1004 (41.24%), Postives = 596/1004 (59.36%), Query Frame = 0
Query: 148 WEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQMQGA 207
W+G + E G R++ YL ++ YK+E+ FE++ C L+ L+Q+ A
Sbjct: 130 WDGVR--AEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDC-LGCTLDGMGA-ILLQLNYA 189
Query: 208 PRIFRKTPSSSSSSLYSN-------ESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHL 267
PRI + +S + + E F W+R +DFTP+ G+ TL L+ S +
Sbjct: 190 PRIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALV 249
Query: 268 PPFFQTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYL 327
++L + + ++SN+VP++ P+ + + Y++LF++N+L+ G +
Sbjct: 250 SDILKSL-PFSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKI 309
Query: 328 SGPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWK 387
++ + F+ + D EK+ L+ CY P ++++ + S S+ +
Sbjct: 310 VAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNV-LL 369
Query: 388 PNISLDDG---LVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELD 447
N +G L+ +RV ITP K++ GPE ++N VV+ +F+RV+FVDE+
Sbjct: 370 SNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWS 429
Query: 448 KLHSIDLAPRSSSPENSTK-RTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWM 507
KL S ++ R S +T +Y R++S+LK G IG K FEFLAFSASQLR NS WM
Sbjct: 430 KLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWM 489
Query: 508 FASREGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVER 567
FAS L+A IR WMG F IR+V+K A R+GQ F SSR+T V ++EVIPD+E+
Sbjct: 490 FASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITT 549
Query: 568 KNVMYCFSDGIGKISKTLAKKVAEKCGL-ISHTPSAFQIRYAGYKGVVAIDPTSEKKLSL 627
Y FSDGIGKIS AK+VA GL ++ PSAFQIRY GYKGV+AIDP S LSL
Sbjct: 550 DGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSL 609
Query: 628 RKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSIL 687
R SM K+ S L++ WSK QPC++NR++ISLLST+GI D +FV Q++ + + + +L
Sbjct: 610 RPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEML 669
Query: 688 EDQSRALEVLELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFV 747
++ AL VL + E + +K LL Y P+ EP+L+M+L+ + N+L D++T+ +I V
Sbjct: 670 TNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHV 729
Query: 748 PKGRTMMGCLDETRTLEYGQVFVHCSVPGR----SSEGNF--------VVKGKVVVAKNP 807
PKGR ++GCLDET LEYGQV++ + + S++ F V GKV + KNP
Sbjct: 730 PKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNP 789
Query: 808 CLHPGDVRLLDAIDVKALHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCI 867
CLHPGD+R+L+AI L MVDC+VFPQ G+RPHPNECSG DLDGDLYF+ WD +L
Sbjct: 790 CLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPE 849
Query: 868 KQVKPMSYKPAPTIQLDHDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAE 927
K PM Y +DH VT+EE+QKHF +YM+ND LGAI+ AH + AD++P KA S E
Sbjct: 850 KVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPE 909
Query: 928 CIKLAKLFSIAVDFSKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFR---GV 987
C++LA L S+AVDF+KTG PA +PR LR EYPDFM++ +KP Y+SNGVLGKL+R G
Sbjct: 910 CLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGH 969
Query: 988 KDVSSDVNSFEIFTREVATRCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKT 1047
+ S D + + + + YDPD+EV G +++L+ A Y Y+ KL LM+YY +
Sbjct: 970 MEKSGDSGALSSSSAQ-PSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAEL 1029
Query: 1048 EPELVSGNI---LKMAKSFDKR--NDLEQITFAMKSLRKEVRSWFNENENKSRYDDIKDE 1107
E E+++GNI + K +KR ++I A+ +L +E R W + + +D
Sbjct: 1030 EDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKE------EDA 1089
Query: 1108 YARASAWYCVTYHPDYWGCYNEGKQRDHFLSFPWCVADKLIEIK 1120
ASAWY VTYHPD GK+ F SFPW D L+ IK
Sbjct: 1090 SRMASAWYRVTYHPD----RRRGKR---FWSFPWIACDNLLAIK 1111
BLAST of MELO3C005284.2 vs. Swiss-Prot
Match:
sp|Q9SG02|RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)
HSP 1 Score: 573.2 bits (1476), Expect = 6.6e-162
Identity = 388/1069 (36.30%), Postives = 567/1069 (53.04%), Query Frame = 0
Query: 134 QLGSMISKDKMRVIW--EGEKWNVEFGNGVRKLWFYLSYEVD------------DYKMEL 193
++G+++S+D V W EG + V+ + K F S DYK+EL
Sbjct: 138 EIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLEL 197
Query: 194 CFENILSVEFRCPLNQPSKFFLIQMQGAPRIFRKTPSSSSSSLYSNE--SNSFRWIRDVD 253
+I +V L+ ++Q+ +PR++ +T + + WIR D
Sbjct: 198 LVRDIQTVRQYKTLH--GFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTD 257
Query: 254 FTPSSCIGQSFTLCLQFSPSHHLPPFFQTLVGY---------KVTYAPFILRKGSSFVSN 313
FT IG+ + + SP + +T + Y +V + P I +
Sbjct: 258 FTQVGAIGRCHSYRVLISPRYENK--LRTALDYFRMRRVQEERVRWPPRIRNEPCFGEPV 317
Query: 314 SNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTLDDEFFQLVDSSRFHPDYIEHA-L 373
S+ I + IS++I+F +N++L RG + L + FF L+ R P + A L
Sbjct: 318 SDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL---RNQPKDVNIASL 377
Query: 374 EKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNISLDDGLVYVHRVQITPLKVYFCGP 433
+ L K + K LK + ++ + + + + R+ ITP + Y P
Sbjct: 378 KHLCTYKRPVFDAYKRLK--LVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPP 437
Query: 434 EANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL----AP--RSSSPENSTKRTRVY 493
E LSNRV+RR+ + FLRV+F+DE + ++S L AP + + + +++T V+
Sbjct: 438 EVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVF 497
Query: 494 DRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIREWMGDFRQIRNV 553
RV S+L +G + +K+ FLAFSA+QLR+ S W FA +DI+ WMG F+ +NV
Sbjct: 498 KRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNV 557
Query: 554 AKYATRLGQSFGSSRKTLCVEEHEIEV-IPDVEVERKNVMYCFSDGIGKISKTLAKKVAE 613
AK A R+G F S+ T+ V HE++ +PD+E Y FSDGIG I+ LA +V E
Sbjct: 558 AKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPDLADEVME 617
Query: 614 KCGL-ISHTPSAFQIRYAGYKGVVAIDPTSEK--KLSLRKSMLKYMSLDTQLDVLLWSKY 673
K L + ++P A+QIRYAG+KGVVA P+ +L+LR SM K+ S T L++ W+++
Sbjct: 618 KLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRF 677
Query: 674 QPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVLELMSPGEMTSIL 733
QP FLNRQ+I+LLS +G+ D +F Q+ + +L+ IL+D A EVL + +
Sbjct: 678 QPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAA 737
Query: 734 KDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCLDETRTLEYGQVF 793
L + + P EP L ML + R +L L+ KSRIFV GR +MGCLDE LE+GQ F
Sbjct: 738 IMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCF 797
Query: 794 VHCSVPGRSSEGNF---------------VVKGKVVVAKNPCLHPGDVRLLDAIDVKALH 853
+ S P S E F VVKG V +AKNPCLHPGDVR+L+A+DV LH
Sbjct: 798 IQVSKP--SIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLH 857
Query: 854 HMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSEL--TCIKQVKPMSYKPAPTIQLD 913
HM DC++FPQ G RPH NE SGSDLDGDLYFV WD +L K M Y A L
Sbjct: 858 HMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLG 917
Query: 914 HDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKT 973
V +++ FA + N+ LG I NAH V AD++ AM EC+ LA+L + AVDF KT
Sbjct: 918 RAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKT 977
Query: 974 GVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDV-SSDVNSFEIFTREVAT 1033
G ++P +L+ YPDFM K D TY SN +LG+L+R VK+V D + + + +
Sbjct: 978 GKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSA 1037
Query: 1034 RCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKR 1093
YD +E+ GFE + EA+ +K YD +L L+ Y ++ E E+V+G+I M K K+
Sbjct: 1038 IPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKK 1097
Query: 1094 ND--LEQITFAMKSLRKEVRSWFNE----NENKSRYDDIKDEYARASAWYCVTYHPDYWG 1135
E++ + SL+KE R F E +EN S + +ASAWY VTYHP++
Sbjct: 1098 QGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVK 1157
BLAST of MELO3C005284.2 vs. TrEMBL
Match:
tr|E5GB63|E5GB63_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)
HSP 1 Score: 2149.4 bits (5568), Expect = 0.0e+00
Identity = 1060/1137 (93.23%), Postives = 1091/1137 (95.95%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
M +TIEIYGF P+VTVDEVKEFLENHTGDGTVSTVRISKPKD+K RFTSVTVRFKSKLAA
Sbjct: 1 MEKTIEIYGFGPKVTVDEVKEFLENHTGDGTVSTVRISKPKDDKTRFTSVTVRFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPEMERMEDVKGQLGSMISKDKMRVIW 148
EYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPEMERMEDVKGQLGSMISKDKMRVIW
Sbjct: 61 EYIVAKATTEEKKLWFESSYLKAREVEKKATSGGPEMERMEDVKGQLGSMISKDKMRVIW 120
Query: 149 EGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQMQG-- 208
EGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQ+
Sbjct: 121 EGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQVSSFF 180
Query: 209 -------------------APRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQS 268
APRIFRKTPSSSSS LYSNESNSFRWIRDVDFTPSSCIGQS
Sbjct: 181 LXXXXXXXXXXXXXXLQCRAPRIFRKTPSSSSSPLYSNESNSFRWIRDVDFTPSSCIGQS 240
Query: 269 FTLCLQFSPSHHLPPFFQTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKI 328
FTLCLQFSPSHHLPPFFQTLVGYKVTY PFILRKGSSFVSNSNLVPIITPPQAFDISYKI
Sbjct: 241 FTLCLQFSPSHHLPPFFQTLVGYKVTYDPFILRKGSSFVSNSNLVPIITPPQAFDISYKI 300
Query: 329 LFKINALLQRGYLSGPTLDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQ 388
LFKINALLQRGYLSGPTLDDEFF+LVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQ
Sbjct: 301 LFKINALLQRGYLSGPTLDDEFFRLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQ 360
Query: 389 YLSFYVSNQLPWKPNISLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFL 448
YLS+YVSNQLPWKPN+SLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFI DIDNFL
Sbjct: 361 YLSYYVSNQLPWKPNVSLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIDDIDNFL 420
Query: 449 RVSFVDEELDKLHSIDLAPRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS 508
RVSFVDEELDKLHSIDLAPRSSSPEN+T RTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS
Sbjct: 421 RVSFVDEELDKLHSIDLAPRSSSPENNT-RTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS 480
Query: 509 QLRENSFWMFASREGLSAADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIE 568
QLRENSFWMFASR+GLSAADIREWMGDFRQIRNVAKYA RLGQSFGSSRKTLCV+EHEIE
Sbjct: 481 QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 540
Query: 569 VIPDVEVERKNVMYCFSDGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDP 628
VIPDVEVERKN+MYCFSDGIGKISKTLAKKVA+KCGL HTPSAFQIRYAGYKGVVAIDP
Sbjct: 541 VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 600
Query: 629 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEA 688
TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEA
Sbjct: 601 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 660
Query: 689 IDQLDSILEDQSRALEVLELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDL 748
IDQLDSILED SRALEVLELMSPGEMTSILK+LLSFYMPNEEPFLNMML TFRANKLLDL
Sbjct: 661 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 720
Query: 749 KTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 808
KTKSRIFVP+GRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP
Sbjct: 721 KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 780
Query: 809 GDVRLLDAIDVKALHHMVDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 868
GDVRLLDAIDVKALHHMVDCVVFPQ GKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK
Sbjct: 781 GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 840
Query: 869 PMSYKPAPTIQLDHDVTIEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKL 928
PMSY+PAP+IQLDHDVTIEEVQK+FANYMVNDGLGAIANAHTVFADKN KKAMSAECIKL
Sbjct: 841 PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 900
Query: 929 AKLFSIAVDFSKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 988
AKLFSIAVDF KTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV
Sbjct: 901 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 960
Query: 989 NSFEIFTREVATRCYDPDMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSG 1048
N+FEIFT+EVAT+CYDPDMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSG
Sbjct: 961 NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1020
Query: 1049 NILKMAKSFDKRNDLEQITFAMKSLRKEVRSWFNENENKSRYDDIK-DEYARASAWYCVT 1108
NILKMAKSFDKRNDLEQI FAMKSLRKEVRSWFNENE+K Y+DI+ DEYARASAWYCVT
Sbjct: 1021 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDIEDDEYARASAWYCVT 1080
Query: 1109 YHPDYWGCYNEGKQRDHFLSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDGVNL 1144
YHPDYWG YNEG QRDHFLSFPWCVADKLI+IKREKMSLRNSSPMSSL +NFDG++L
Sbjct: 1081 YHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDGMSL 1136
BLAST of MELO3C005284.2 vs. TrEMBL
Match:
tr|A0A0S1YCZ4|A0A0S1YCZ4_CUCSA (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1c PE=2 SV=1)
HSP 1 Score: 2106.3 bits (5456), Expect = 0.0e+00
Identity = 1030/1112 (92.63%), Postives = 1070/1112 (96.22%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYIEHALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSSPENS +RTRVYDRV+S+LKNGIVIG+KKFEFLAFSASQLRENSFWMFASREGLS
Sbjct: 421 APRSSSPENS-QRTRVYDRVISILKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN+MYCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGL SHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVLLWSKYQPCFLNRQVI+LLST+GI D+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPN+EPFLNMMLRTFRA+KLLDL+TKSRIFVPKGRTMMGC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDET+TLEYGQVFVHCS+PGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM
Sbjct: 721 LDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYFVCWD+ELTCIKQVKPMSYKPAPTIQLDHDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAPTIQLDHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEEVQ++FANYMVNDGLGAIANAHTVFADKN KKAMSAECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+K TYVSNGVLGKLFRGVKDVSSDV++FEIFTREVAT+CYDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDVSAFEIFTREVATKCYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKR DLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRKDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
I FAMKSLRKEVR WFNENE+KS YDDI+DEYARASAWYCVTYHPDYWGCYNEG +RDHF
Sbjct: 1021 IAFAMKSLRKEVRFWFNENESKSTYDDIQDEYARASAWYCVTYHPDYWGCYNEGTKRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLH 1137
LSFPWCVADKLI+IKREKMS+RNSSP SSLLH
Sbjct: 1081 LSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111
BLAST of MELO3C005284.2 vs. TrEMBL
Match:
tr|A0A0A0KRH3|A0A0A0KRH3_CUCSA (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G564290 PE=3 SV=1)
HSP 1 Score: 2094.7 bits (5426), Expect = 0.0e+00
Identity = 1022/1116 (91.58%), Postives = 1070/1116 (95.88%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK K T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVAKETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYI+HALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSS ENS +RTRVYDRVVSVLKNGIVIG+KKFEFLAFSASQLRENSFWMFASREGLS
Sbjct: 421 APRSSSHENS-QRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN+MYCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPTS+KKLSLR SMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVL WSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVP+GRTM+GC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHPGDVR+LDA+DVKALHHM
Sbjct: 721 LDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIKQVKPM+Y+PAPTIQL+HDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEE+Q++FANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDVN+FEIFTREVAT+ YDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGN+LKMAKSFDKRNDLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
ITFAMKSLRKEVRSWFNENE+K YDDI+DEYA+ASAWY VTYHPDYWGCYNEG QRDHF
Sbjct: 1021 ITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDG 1141
LSFPWCVADKLI+IKR+KM+L+NS P+SSL HNFDG
Sbjct: 1081 LSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115
BLAST of MELO3C005284.2 vs. TrEMBL
Match:
tr|A0A1D8RK46|A0A1D8RK46_CUCSA (RNA-dependent RNA polymerase (Fragment) OS=Cucumis sativus OX=3659 GN=RDR1c2 PE=2 SV=1)
HSP 1 Score: 2090.1 bits (5414), Expect = 0.0e+00
Identity = 1019/1116 (91.31%), Postives = 1069/1116 (95.79%), Query Frame = 0
Query: 29 MGRTIEIYGFRPEVTVDEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVRFKSKLAA 88
MG+TIEIYGFRP+VT DEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTV FKSKLAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 89 EYIVAKATTEEKKLWFESSYLKAREVEK----KATSGGPEMERMEDVKGQLGSMISKDKM 148
EYIVAK+TTEE+KLWFESSYLKARE+EK T G EMERMEDVKG LGSMIS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 149 RVIWEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQM 208
RVIWEGEKW+VEFGNG RKLWFYLSYEVD+YKMELCFENILSVEFRCPLN+PSKFFLIQ+
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 209 QGAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFF 268
QGAPRIFRKTPSSSSS LYSN+S SFRWIRDVDFTPSSCIGQSFT+CLQ SPSHHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 269 QTLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPT 328
QTLVGYKVTYAPFIL KGSS VSNSNLVPIITPPQAFDISYKILFKINALLQ GYLSGPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 329 LDDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNIS 388
LDDEFF+LVDSSRFH DYI+HALEKLFNLKECCYKPQKWLKDQYLS+Y SNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 389 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 448
LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 449 APRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLS 508
APRSSS ENS +RTRVYDRVVSVLKNGIVIG+KKFEFLAFSASQL+ENSFWMFASREGLS
Sbjct: 421 APRSSSHENS-QRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLKENSFWMFASREGLS 480
Query: 509 AADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFS 568
AADIREWMGDF IRNVAKYA RLGQSFGSSRKTLCVEEHEIEVIPDVEVERKN++YCFS
Sbjct: 481 AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIIYCFS 540
Query: 569 DGIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 628
DGIGKISKTLAKKVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPTS+KKLSLR SMLKYMS
Sbjct: 541 DGIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMS 600
Query: 629 LDTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEV 688
LDTQLDVL WSKYQPCFLNRQVI+LLST+GIGD+VFV+KQKEAIDQLDSILED SRALEV
Sbjct: 601 LDTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEV 660
Query: 689 LELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGC 748
LELMSPGEMTSILK+LLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVP+GRTM+GC
Sbjct: 661 LELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGC 720
Query: 749 LDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 808
LDETRTLEYGQVFVHCSVP RSSEGNFVVKGK+VVAKNPCLHPGDVR+LDA+DVKALHHM
Sbjct: 721 LDETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHM 780
Query: 809 VDCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVT 868
VDCVVFPQ GKRPHPNECSGSDLDGDLYF CWD ELTCIKQVKPM+Y+PAPTIQL+HDVT
Sbjct: 781 VDCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVT 840
Query: 869 IEEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPA 928
IEE+Q++FANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDF KTGVPA
Sbjct: 841 IEEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPA 900
Query: 929 NLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDP 988
NLPRNLRVHEYPDFMDKP+KPTYVSNGVLGKLFRGVKDVSSDVN+FEIFTREVAT+ YDP
Sbjct: 901 NLPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDP 960
Query: 989 DMEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQ 1048
DMEVDGFEKYLREAF YKTKYDFKLGNLMDYYGIKTEPELVSGN+LKMAKSFDKRNDLEQ
Sbjct: 961 DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQ 1020
Query: 1049 ITFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHF 1108
ITFAMKSLRKEVRSWFNENE+K YDDI+DEYA+ASAWY VTYHPDYWGCYNEG QRDHF
Sbjct: 1021 ITFAMKSLRKEVRSWFNENESKFTYDDIEDEYAKASAWYYVTYHPDYWGCYNEGMQRDHF 1080
Query: 1109 LSFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDG 1141
LSFPWCVADKLI+IKR+KM+L+NS P+SSL HNFDG
Sbjct: 1081 LSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNFDG 1115
BLAST of MELO3C005284.2 vs. TrEMBL
Match:
tr|A0A1S3AU99|A0A1S3AU99_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103483036 PE=3 SV=1)
HSP 1 Score: 1921.0 bits (4975), Expect = 0.0e+00
Identity = 938/938 (100.00%), Postives = 938/938 (100.00%), Query Frame = 0
Query: 206 GAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFFQ 265
GAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFFQ
Sbjct: 1 GAPRIFRKTPSSSSSSLYSNESNSFRWIRDVDFTPSSCIGQSFTLCLQFSPSHHLPPFFQ 60
Query: 266 TLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTL 325
TLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTL
Sbjct: 61 TLVGYKVTYAPFILRKGSSFVSNSNLVPIITPPQAFDISYKILFKINALLQRGYLSGPTL 120
Query: 326 DDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNISL 385
DDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNISL
Sbjct: 121 DDEFFQLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKDQYLSFYVSNQLPWKPNISL 180
Query: 386 DDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDLA 445
DDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDLA
Sbjct: 181 DDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDLA 240
Query: 446 PRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 505
PRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA
Sbjct: 241 PRSSSPENSTKRTRVYDRVVSVLKNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 300
Query: 506 ADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFSD 565
ADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFSD
Sbjct: 301 ADIREWMGDFRQIRNVAKYATRLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNVMYCFSD 360
Query: 566 GIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSL 625
GIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSL
Sbjct: 361 GIGKISKTLAKKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSL 420
Query: 626 DTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVL 685
DTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVL
Sbjct: 421 DTQLDVLLWSKYQPCFLNRQVISLLSTIGIGDNVFVRKQKEAIDQLDSILEDQSRALEVL 480
Query: 686 ELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCL 745
ELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCL
Sbjct: 481 ELMSPGEMTSILKDLLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPKGRTMMGCL 540
Query: 746 DETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMV 805
DETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMV
Sbjct: 541 DETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMV 600
Query: 806 DCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVTI 865
DCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVTI
Sbjct: 601 DCVVFPQNGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVKPMSYKPAPTIQLDHDVTI 660
Query: 866 EEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPAN 925
EEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPAN
Sbjct: 661 EEVQKHFANYMVNDGLGAIANAHTVFADKNPKKAMSAECIKLAKLFSIAVDFSKTGVPAN 720
Query: 926 LPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDPD 985
LPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDPD
Sbjct: 721 LPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDVNSFEIFTREVATRCYDPD 780
Query: 986 MEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQI 1045
MEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQI
Sbjct: 781 MEVDGFEKYLREAFHYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRNDLEQI 840
Query: 1046 TFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHFL 1105
TFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHFL
Sbjct: 841 TFAMKSLRKEVRSWFNENENKSRYDDIKDEYARASAWYCVTYHPDYWGCYNEGKQRDHFL 900
Query: 1106 SFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDGVNL 1144
SFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDGVNL
Sbjct: 901 SFPWCVADKLIEIKREKMSLRNSSPMSSLLHNFDGVNL 938
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| ADN33705.1 | 0.0e+00 | 93.23 | RNA-dependent RNA polymerase [Cucumis melo subsp. melo] | [more] |
| ALM88235.1 | 0.0e+00 | 92.63 | RNA-dependent RNA polymerase 1c [Cucumis sativus] | [more] |
| KGN51474.1 | 0.0e+00 | 91.58 | hypothetical protein Csa_5G564290 [Cucumis sativus] | [more] |
| XP_011655453.1 | 0.0e+00 | 91.58 | PREDICTED: probable RNA-dependent RNA polymerase 1 [Cucumis sativus] | [more] |
| AOW73471.1 | 0.0e+00 | 91.31 | RNA-dependent RNA polymerase 1c2, partial [Cucumis sativus] | [more] |
