Cucsa.257540 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.257540
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDNA repair protein RAD51 homolog 3
Locationscaffold02229 : 4798892 .. 4801048 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGATATCTTATATAGTACAGGTGCGGAGACTGCTTGGGATATGCTTCACAAAGAGCAGTTCATTCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGCGGAGGAATTAATGTCAGTGAAGTTACGGAAATTGGTTAGTGAGCAATATCCTTTCTTCTGGTCAGTTGTATTATTATGTATATTGAATGCGTTGTTTTTTCCTCTTTATTTTGTAAAGAATAGTGCACTTTATTTTATTTATTTATAATATAATGTCAACTCATGTTCTTTTACTATGCTTCTAGCAATATGAGCATTTTAAAAAATCTCTTTCTTTATGCCAGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGTATGAATATTTGTTATATGTTTCTTTCCCAATATGAAAATGGTTCTATGCTGGTCAGAAATAAAACGTCATGGTCTTTCTGTATGGGGTAACAGGATTCAACTTGCGGTAAATGTCCAAATTCCAGGTGCATTTGGTGGGGTAGGTGGAAAAGCAGTTTATATAGGTAGGTAGGTTCCCTTCCAGATTTTGCTCCTGGTTCTTTCGACATTTTTGCTTGAAATTGCAATCTAGTTAGGGATATGGCTTTCCTTGATTTCTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAGGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCAATACCTCATCAAATTCAAATCGAACCGAAAGATATCTTGGAAAATATATTTtATTTTCGTGTCTGCAGCTACACAGAGCAAATTGCTCTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTAGGTAGATTTTTCTTTGAACTTCTAAATTTTTTGTTAGCGTGAGGTAACTGATTCAGATATGTGTAGTTCCCTCGTCTTTCAAGTTTATCTTGTATTACATTACTTAATGATGCCATGCTACTTGGAAGCTTCTTCTTTTGTCTAGAGTACGTTGTTGCTTTTCTTGAATTGGATATTTATAACCATTGTTATTAATTAAATGGTTTTCTTCTACATCTCGTTTGTCGGCCTACAGTTCAAATGTTCTGAAAATTACCGACTATTTCTTTGCAGGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTTCGCCAAAATTTTGATGATTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTCATGAAGCTGGCCAAGAAGTTCAGTTTGGCTGTAAGAATCAACCATCTCTCGTTATAATGTTTCGAACTAACTCAAATATACGATTAGGTATCAACTTAAATTGATATGAGTAGCATATGCTATATAGTTAATTGTAAAAGAATGTCATCTTCCTTGCAGTTGATGAGTTCCACTGACCTCCATTTGGTTGATTTGCAATGATAATTCACTGGCCTCGAATGTCTTAGCTTTAACATAAGGTTGAGCATGATATATGTAAATTCATCTATTTGAAGAAACGATATTTAAGTAGATAATGTTCTTCCATGCTCTTTCCATATCATGTCAATATTCTGAATATGCATCTTTTTACTTTTCAACCAATACTAAGAGAAATTCATATATGCTTGGTTATGTCACTCTACCGTTTTTATTTTACATATCATGTTCCTTCTAACATACTCCTGTTGACGTTTACGTTTATTCTAATAATGTTTTTtCCGTCTTTCTTGCATTTTTGCCCTCTTTTCTTCAACCGTGTGGCAGGTTGTTCTATTTAATCAGGTGACGACTAAGTTCGCCGAAGGCTCATTCCAATTAACTCTTGCATTGGGTATGTCCTTTTAAGTCACCCCTTACCTTCCACCGTTGAAATTCATTGTTGACATATTACGTTGTTGCACTCACTTGGATGTCTTCAAGCATTATGATTCCATCGAACTGATCAGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTGTATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTGTACATCCAGTAATAAGAGAACCAAAATGATGTAAGATTGTAAGATTCAAAACGCCTTTAAATTCTCGCAT

mRNA sequence

ATTTGATATCTTATATAGTACAGGTGCGGAGACTGCTTGGGATATGCTTCACAAAGAGCAGTTCATTCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGCGGAGGAATTAATGTCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGTATGAATATTTGTTATATGTTTCTTTCCCAATATGAAAATGGTTCTATGCTGGTCAGAAATAAAACGTCATGGTCTTTCTGTATGGGGTAACAGGATTCAACTTGCGGTAAATGTCCAAATTCCAGGTGCATTTGGTGGGGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAGGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCAATACCTCATCAAATTCAAATCGAACCGAAAGATATCTTGGAAAATATATTTTATTTTCGTGTCTGCAGCTACACAGAGCAAATTGCTCTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTTCGCCAAAATTTTGATGATTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTCATGAAGCTGGCCAAGAAGTTCAGTTTGGCTGTTGTTCTATTTAATCAGGTGACGACTAAGTTCGCCGAAGGCTCATTCCAATTAACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTGTATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTGTACATCCAGTAATAAGAGAACCAAAATGATGTAAGATTGTAAGATTCAAAACGCCTTTAAATTCTCGCAT

Coding sequence (CDS)

ATGAAAATGGTTCTATGCTGGTCAGAAATAAAACGTCATGGTCTTTCTGTATGGGGTAACAGGATTCAACTTGCGGTAAATGTCCAAATTCCAGGTGCATTTGGTGGGGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAGGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCAATACCTCATCAAATTCAAATCGAACCGAAAGATATCTTGGAAAATATATTTtATTTTCGTGTCTGCAGCTACACAGAGCAAATTGCTCTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTTCGCCAAAATTTTGATGATTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTCATGAAGCTGGCCAAGAAGTTCAGTTTGGCTGTTGTTCTATTTAATCAGGTGACGACTAAGTTCGCCGAAGGCTCATTCCAATTAACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTGTATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTGTACATCCAGTAATAAGAGAACCAAAATGATGTAA

Protein sequence

MKMVLCWSEIKRHGLSVWGNRIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM*
Homology
[Close]
BLAST of Cucsa.257540 vs. Swiss-Prot
Match: RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2)

HSP 1 Score: 360.9 bits (925), Expect = 1.1e-98
Identity = 175/223 (78.48%), Postives = 205/223 (91.93%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP   GG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+   +Q
Sbjct: 141 IQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQ 200

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++P+DILENIFYFRVCSYTEQIAL+N+L+KFI+E+KDVKVVIVDS+TFHFRQ++DDLA
Sbjct: 201 VQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLA 260

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTKF+EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 261 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILY 320

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 321 WNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

[Close]
BLAST of Cucsa.257540 vs. Swiss-Prot
Match: RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.1e-45
Identity = 98/226 (43.36%), Postives = 147/226 (65.04%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           +QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +   +   K     HQ
Sbjct: 127 MQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEE--HQ 186

Query: 82  IQIEP---KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 141
             +E    ++IL +I+YFR   YTE +A +  L  F++ H  V++VI+D +   FR + D
Sbjct: 187 KALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDLD 246

Query: 142 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 201
           DL+LRTRLL+ +A + + LA    LAV+L NQ+TTK  +    L  ALG+SW H+ T R+
Sbjct: 247 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRL 306

Query: 202 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNC--TSSNKRTK 243
           I +W   +R+A L KSPS + ++ P+ +T +G R+   T+S+ +T+
Sbjct: 307 IFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

[Close]
BLAST of Cucsa.257540 vs. Swiss-Prot
Match: RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.0e-45
Identity = 95/226 (42.04%), Postives = 149/226 (65.93%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           +QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +  + +        HQ
Sbjct: 127 MQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHL--HLIAGTHTEEEHQ 186

Query: 82  IQIEP---KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 141
             ++    ++IL +I+YFR   YTE +A +  L  F+++H  V++VI+D + F FR + +
Sbjct: 187 KALKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLE 246

Query: 142 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 201
           DL+LRTRLL+ +A + + LA    LAV+L NQ+TTK  +    L  ALG+SW H+ T R+
Sbjct: 247 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRL 306

Query: 202 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNC--TSSNKRTK 243
           I +W   +R+A L KSPS + ++ P+ +T +G R+   T+++ +T+
Sbjct: 307 IFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

[Close]
BLAST of Cucsa.257540 vs. Swiss-Prot
Match: RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-44
Identity = 95/215 (44.19%), Postives = 137/215 (63.72%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           +QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +    +  K     H+
Sbjct: 136 MQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ--LIAEKHKGEEHR 195

Query: 82  IQIEP---KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 141
             +E     +IL +I+YFR   YTE +A +  L  F++EH  V++VIVD + F FR + D
Sbjct: 196 KALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD 255

Query: 142 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 201
           DL+LRTRLL+ +A + + LA    LAV+L NQ+TTK       L  ALG+SW H+ T R+
Sbjct: 256 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRL 315

Query: 202 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRN 234
           I +W+  +R A L KSPS +  +  + +  +G R+
Sbjct: 316 IFHWDRKQRLATLYKSPSQKECTVLFQIKPQGFRD 348

[Close]
BLAST of Cucsa.257540 vs. Swiss-Prot
Match: RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.6e-41
Identity = 90/222 (40.54%), Postives = 135/222 (60.81%), Query Frame = 1 

Query: 14  GLSVWGNRIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLL 73
           G+       QL VN  IP   GGV GKA+YIDTEGS+  +R  ++A   +  +    VLL
Sbjct: 92  GIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGSYSCQRVREMATHLVNHLE--CVLL 151

Query: 74  KKNAIPHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHF 133
           K            + +L +I+Y+RV  Y E I+LI+ L  F+ ++KDVK+++VDS+T+ F
Sbjct: 152 KNPMTQTTYIPTVETVLNSIYYYRVYHYIEIISLIHQLPLFLEKNKDVKLIVVDSITYPF 211

Query: 134 RQNFDDLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLA--LGDSWS 193
           R +F D+ LRTR L  +A   M +A +++LAVV+ NQVTTK +    +  L   LG+SW+
Sbjct: 212 RCDFKDMGLRTRSLLSLAQNLMNIATRYNLAVVVMNQVTTKISPNQKESILVPYLGESWT 271

Query: 194 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRN 234
           H CT R++L+W   +R+ +L KSPS +S   P+ +   GIR+
Sbjct: 272 HICTYRMVLFWKQKQRFCHLYKSPSFKSCFTPFDIVEYGIRD 311

[Close]
BLAST of Cucsa.257540 vs. TrEMBL
Match: A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 8.3e-122
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ
Sbjct: 124 IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 183

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA
Sbjct: 184 IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 243

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
           LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY
Sbjct: 244 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 303

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM
Sbjct: 304 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of Cucsa.257540 vs. TrEMBL
Match: A0A078CD35_BRANA (BnaA05g04710D protein OS=Brassica napus GN=BnaA05g04710D PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.4e-97
Identity = 177/223 (79.37%), Postives = 204/223 (91.48%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP  FGG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+    Q
Sbjct: 182 IQLSVNVQIPREFGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFKASQ 241

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++P+DILENIFYFRVCSYTEQIAL+N+LDKFI+E+KDVKVVIVDS+TFHFRQ+FDDLA
Sbjct: 242 VQMKPRDILENIFYFRVCSYTEQIALVNHLDKFISENKDVKVVIVDSITFHFRQDFDDLA 301

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTK+ EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 302 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKYTEGSFQLALALGDSWSHSCTNRVILY 361

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 362 WNGDERYAYIDKSPSLPSASASYTVTGRGLRNSSSSSKRVKMM 404

[Close]
BLAST of Cucsa.257540 vs. TrEMBL
Match: M4CL11_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.4e-97
Identity = 177/223 (79.37%), Postives = 204/223 (91.48%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP  FGG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+    Q
Sbjct: 148 IQLSVNVQIPREFGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFKASQ 207

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++P+DILENIFYFRVCSYTEQIAL+N+LDKFI+E+KDVKVVIVDS+TFHFRQ+FDDLA
Sbjct: 208 VQMKPRDILENIFYFRVCSYTEQIALVNHLDKFISENKDVKVVIVDSITFHFRQDFDDLA 267

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTK+ EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 268 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKYTEGSFQLALALGDSWSHSCTNRVILY 327

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 328 WNGDERYAYIDKSPSLPSASASYTVTGRGLRNSSSSSKRVKMM 370

[Close]
BLAST of Cucsa.257540 vs. TrEMBL
Match: A0A078JP02_BRANA (BnaAnng26450D protein (Fragment) OS=Brassica napus GN=BnaAnng26450D PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.2e-97
Identity = 176/223 (78.92%), Postives = 204/223 (91.48%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP  FGG+GGKA+YIDTEGSFMVERALQIA+AC+EDM +Y+  + K+    Q
Sbjct: 82  IQLSVNVQIPREFGGLGGKAIYIDTEGSFMVERALQIAQACVEDMEEYTGYMHKHFKASQ 141

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++P+DILENIFYFRVCSYTEQIAL+N+LDKFI+E+KDVKVVIVDS+TFHFRQ+FDDLA
Sbjct: 142 VQMKPRDILENIFYFRVCSYTEQIALVNHLDKFISENKDVKVVIVDSITFHFRQDFDDLA 201

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTK+ EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 202 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKYTEGSFQLALALGDSWSHSCTNRVILY 261

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 262 WNGDERYAYIDKSPSLPSASASYTVTGRGLRNSSSSSKRVKMM 304

[Close]
BLAST of Cucsa.257540 vs. TrEMBL
Match: A0A078G2P2_BRANA (BnaC04g04170D protein OS=Brassica napus GN=BnaC04g04170D PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.2e-97
Identity = 176/223 (78.92%), Postives = 204/223 (91.48%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP  FGG+GGKA+YIDTEGSFMVERALQIA+AC+EDM +Y+  + K+    Q
Sbjct: 125 IQLSVNVQIPREFGGLGGKAIYIDTEGSFMVERALQIAQACVEDMEEYTGYMHKHFKASQ 184

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++P+DILENIFYFRVCSYTEQIAL+N+LDKFI+E+KDVKVVIVDS+TFHFRQ+FDDLA
Sbjct: 185 VQMKPRDILENIFYFRVCSYTEQIALVNHLDKFISENKDVKVVIVDSITFHFRQDFDDLA 244

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTK+ EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 245 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKYTEGSFQLALALGDSWSHSCTNRVILY 304

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 305 WNGDERYAYIDKSPSLPSASASYTVTGRGLRNSSSSSKRVKMM 347

[Close]
BLAST of Cucsa.257540 vs. TAIR10
Match: AT2G45280.2 (AT2G45280.2 RAS associated with diabetes protein 51C)

HSP 1 Score: 360.9 bits (925), Expect = 6.1e-100
Identity = 175/223 (78.48%), Postives = 205/223 (91.93%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP   GG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+   +Q
Sbjct: 165 IQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQ 224

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++P+DILENIFYFRVCSYTEQIAL+N+L+KFI+E+KDVKVVIVDS+TFHFRQ++DDLA
Sbjct: 225 VQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLA 284

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTKF+EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 285 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILY 344

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 345 WNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 387

[Close]
BLAST of Cucsa.257540 vs. TAIR10
Match: AT3G22880.1 (AT3G22880.1 DNA repair (Rad51) family protein)

HSP 1 Score: 84.7 bits (208), Expect = 8.5e-17
Identity = 66/215 (30.70%), Postives = 106/215 (49.30%), Query Frame = 1 

Query: 24  LAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQ 83
           L V  Q+P    G  GK  YIDTEG+F  +R + IAE                    +  
Sbjct: 146 LCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFG 205

Query: 84  IEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNF---DDL 143
           ++P  +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +L
Sbjct: 206 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGEL 265

Query: 144 ALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSF---QLTLALGDSWSHSCTNR 203
           A R + L++M  + +K+A++F++AV + NQV      G F       A G   +H+ T R
Sbjct: 266 ADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIR 325

Query: 204 IIL-YWNGDERYAYLEKSPSLQSASAPYSVTCRGI 232
           ++     GD R   +  +P+L  A A + +T  GI
Sbjct: 326 LLFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGI 339

[Close]
BLAST of Cucsa.257540 vs. TAIR10
Match: AT5G20850.1 (AT5G20850.1 RAS associated with diabetes protein 51)

HSP 1 Score: 81.3 bits (199), Expect = 9.4e-16
Identity = 66/220 (30.00%), Postives = 103/220 (46.82%), Query Frame = 1 

Query: 24  LAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQ 83
           L V  Q+P   GG  GKA+YID EG+F  +R LQIA+                    +  
Sbjct: 143 LCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFG 202

Query: 84  IEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD---DL 143
           +   D+LEN+ Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L
Sbjct: 203 LNGADVLENVAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGEL 262

Query: 144 ALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSF-----QLTLALGDSWSHSCT 203
           + R   L++      KLA +F +AVV+ NQV  +  +GS      Q     G+  +H+ T
Sbjct: 263 SARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQ-VDGSALFAGPQFKPIGGNIMAHATT 322

Query: 204 NRIIL-YWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNC 235
            R+ L     +ER   +  SP L  A A + ++  G+ +C
Sbjct: 323 TRLALRKGRAEERICKVISSPCLPEAEARFQISTEGVTDC 340

[Close]
BLAST of Cucsa.257540 vs. TAIR10
Match: AT5G57450.1 (AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3))

HSP 1 Score: 62.0 bits (149), Expect = 5.9e-10
Identity = 46/158 (29.11%), Postives = 80/158 (50.63%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           +QL++  Q+P + GG+ G ++Y+ +E  F   R  Q++    +  S+ S+    N  P  
Sbjct: 57  LQLSLCTQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQ--SNPSIYANYNDNP-- 116

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKD---VKVVIVDSVTFHFRQNFD 141
                    +++F   V S      ++  +D F+   K    +K++++DSV   FR  FD
Sbjct: 117 --------CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFD 176

Query: 142 ----DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVT 173
               DL  R+ L  +++ K  +LA KF LA+V+ NQVT
Sbjct: 177 NTPSDLKKRSSLFFKISGKLKQLASKFDLAIVITNQVT 202

[Close]
BLAST of Cucsa.257540 vs. TAIR10
Match: AT2G28560.1 (AT2G28560.1 DNA repair (Rad51) family protein)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09
Identity = 55/232 (23.71%), Postives = 101/232 (43.53%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           ++LA++   P A+GG+ G+ +YID E  F   R +++      ++               
Sbjct: 120 MKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEV-------------FH 179

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           ++   +++   I   R  S       I  L   I +++ VK++++DS+T          A
Sbjct: 180 LKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQ-VKLLVIDSMTALLSGENKPGA 239

Query: 142 LRTRLLSEMALKFMKLAKKFS-LAVVLFNQVTT----KFAEGSFQ--------------- 201
            R   L    + F+K   +FS + +V+ NQV +    + ++ SFQ               
Sbjct: 240 QRQPQLG-WHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYD 299

Query: 202 --LTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGI 232
             L  ALG +W+H+ T R++L     +R   + KSP     + P+ +T  GI
Sbjct: 300 SHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGI 336

[Close]
BLAST of Cucsa.257540 vs. NCBI nr
Match: gi|449432271|ref|XP_004133923.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 1.2e-121
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ
Sbjct: 124 IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 183

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA
Sbjct: 184 IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 243

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
           LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY
Sbjct: 244 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 303

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM
Sbjct: 304 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of Cucsa.257540 vs. NCBI nr
Match: gi|659075500|ref|XP_008438178.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 3.3e-119
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ
Sbjct: 124 IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 183

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           IQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA
Sbjct: 184 IQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 243

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
           LRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY
Sbjct: 244 LRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 303

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAYLEKSPSLQSASAPYSVTCRGIRN TSSNKRTKMM
Sbjct: 304 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 346

[Close]
BLAST of Cucsa.257540 vs. NCBI nr
Match: gi|778677460|ref|XP_011650791.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 7.3e-119
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQLAVNVQIPGAFGGVGGKAVYI  EGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ
Sbjct: 124 IQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 183

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA
Sbjct: 184 IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 243

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
           LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY
Sbjct: 244 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 303

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM
Sbjct: 304 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 344

[Close]
BLAST of Cucsa.257540 vs. NCBI nr
Match: gi|659075498|ref|XP_008438177.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo])

HSP 1 Score: 429.5 bits (1103), Expect = 4.0e-117
Identity = 220/230 (95.65%), Postives = 221/230 (96.09%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ
Sbjct: 124 IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 183

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           IQIEPK+ILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA
Sbjct: 184 IQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 243

Query: 142 LRTRLLSEMALKFMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGDSWSHSC 201
           LRTRLLSEMALK MKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALGDSWSHSC
Sbjct: 244 LRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWSHSC 303

Query: 202 TNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           TNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRN TSSNKRTKMM
Sbjct: 304 TNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 353

[Close]
BLAST of Cucsa.257540 vs. NCBI nr
Match: gi|727472400|ref|XP_010518143.1| (PREDICTED: DNA repair protein RAD51 homolog 3 [Camelina sativa])

HSP 1 Score: 365.2 bits (936), Expect = 9.2e-98
Identity = 177/223 (79.37%), Postives = 204/223 (91.48%), Query Frame = 1 

Query: 22  IQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQ 81
           IQL+VNVQIP  FGG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+   +Q
Sbjct: 124 IQLSVNVQIPREFGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFKANQ 183

Query: 82  IQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLA 141
           +Q++PKDILENIFYFRVCSYTEQIAL+N+LDKFI+E+KDVKVVIVDS+TFHFRQ+FDDL 
Sbjct: 184 VQMKPKDILENIFYFRVCSYTEQIALVNHLDKFISENKDVKVVIVDSITFHFRQDFDDLV 243

Query: 142 LRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILY 201
            RTR+LSEMALKFMKLAKKFSLAVVL NQVTTK+ EGSFQL LALGDSWSHSCTNR+ILY
Sbjct: 244 QRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKYTEGSFQLALALGDSWSHSCTNRVILY 303

Query: 202 WNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 245
           WNGDERYAY++KSPSL SASA Y+VT RG+RN +SS+KR KMM
Sbjct: 304 WNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 346

The following BLAST results are available for this feature:
BLAST of Cucsa.257540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA51C_ARATH1.1e-9878.48DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2[more]
RA51C_CRIGR4.1e-4543.36DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1[more]
RA51C_MOUSE9.0e-4542.04DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1[more]
RA51C_HUMAN7.7e-4444.19DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1[more]
RA51C_DICDI3.6e-4140.54DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV... [more]
BLAST of Cucsa.257540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3U2_CUCSA8.3e-122100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1[more]
A0A078CD35_BRANA1.4e-9779.37BnaA05g04710D protein OS=Brassica napus GN=BnaA05g04710D PE=4 SV=1[more]
M4CL11_BRARP1.4e-9779.37Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078JP02_BRANA3.2e-9778.92BnaAnng26450D protein (Fragment) OS=Brassica napus GN=BnaAnng26450D PE=4 SV=1[more]
A0A078G2P2_BRANA3.2e-9778.92BnaC04g04170D protein OS=Brassica napus GN=BnaC04g04170D PE=4 SV=1[more]
BLAST of Cucsa.257540 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45280.26.1e-10078.48 RAS associated with diabetes protein 51C[more]
AT3G22880.18.5e-1730.70 DNA repair (Rad51) family protein[more]
AT5G20850.19.4e-1630.00 RAS associated with diabetes protein 51[more]
AT5G57450.15.9e-1029.11 homolog of X-ray repair cross complementing 3 (XRCC3)[more]
AT2G28560.15.0e-0923.71 DNA repair (Rad51) family protein[more]
BLAST of Cucsa.257540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432271|ref|XP_004133923.1|1.2e-121100.00PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus][more]
gi|659075500|ref|XP_008438178.1|3.3e-11998.65PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo][more]
gi|778677460|ref|XP_011650791.1|7.3e-11999.10PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus][more]
gi|659075498|ref|XP_008438177.1|4.0e-11795.65PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo][more]
gi|727472400|ref|XP_010518143.1|9.2e-9879.37PREDICTED: DNA repair protein RAD51 homolog 3 [Camelina sativa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.257540.1Cucsa.257540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51, C-terminalPFAMPF08423Rad51coord: 23..234
score: 1.3
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 1..171
score: 3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 22..233
score: 1.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..232
score: 7.97
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 22..233
score: 6.0
NoneNo IPR availablePANTHERPTHR22942:SF14DNA REPAIR PROTEIN RAD51 HOMOLOG 3coord: 22..233
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.257540Cla021319Watermelon (97103) v1cgywmB479
Cucsa.257540Csa3G126250Cucumber (Chinese Long) v2cgycuB366
Cucsa.257540MELO3C006201Melon (DHL92) v3.5.1cgymeB439
Cucsa.257540ClCG05G002360Watermelon (Charleston Gray)cgywcgB451
Cucsa.257540CSPI03G09670Wild cucumber (PI 183967)cgycpiB383
Cucsa.257540CmaCh06G011430Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.257540CmoCh06G011690Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.257540Cp4.1LG08g02080Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.257540MELO3C006201.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.257540CsaV3_3G009800Cucumber (Chinese Long) v3cgycucB387
Cucsa.257540Cla97C05G082870Watermelon (97103) v2cgywmbB452
Cucsa.257540Bhi01G000176Wax gourdcgywgoB515
Cucsa.257540Carg06375Silver-seed gourdcarcgyB1077
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.257540Cucumber (Gy14) v1cgycgyB130
Cucsa.257540Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.257540Cucurbita maxima (Rimu)cgycmaB0715
Cucsa.257540Cucurbita maxima (Rimu)cgycmaB0730
Cucsa.257540Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.257540Cucurbita moschata (Rifu)cgycmoB0708
Cucsa.257540Cucurbita moschata (Rifu)cgycmoB0719
Cucsa.257540Wild cucumber (PI 183967)cgycpiB393
Cucsa.257540Cucumber (Chinese Long) v2cgycuB374
Cucsa.257540Melon (DHL92) v3.5.1cgymeB429
Cucsa.257540Watermelon (Charleston Gray)cgywcgB454
Cucsa.257540Watermelon (97103) v1cgywmB484
Cucsa.257540Cucurbita pepo (Zucchini)cgycpeB0670
Cucsa.257540Cucurbita pepo (Zucchini)cgycpeB0677
Cucsa.257540Cucurbita pepo (Zucchini)cgycpeB0679
Cucsa.257540Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.257540Bottle gourd (USVL1VR-Ls)cgylsiB410
Cucsa.257540Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.257540Melon (DHL92) v3.6.1cgymedB423
Cucsa.257540Silver-seed gourdcarcgyB0269
Cucsa.257540Silver-seed gourdcarcgyB0693
Cucsa.257540Silver-seed gourdcarcgyB1191
Cucsa.257540Cucumber (Chinese Long) v3cgycucB398
Cucsa.257540Watermelon (97103) v2cgywmbB455
Cucsa.257540Wax gourdcgywgoB506