CmaCh06G011430 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G011430
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDNA repair and recombination protein RadA
LocationCma_Chr06 : 7703844 .. 7708386 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAACAGTTTTTGAAAGGGGTCTTTTTCCAAATTCAAAACATTTAGAGGCTATTTTTCTAAAATTACCCCTGCGCGCGCCGTAGAAACCTTACTCCTTTCATTTCGTCGGCGATTGCCAATAGTGTTACTCGGAGATACAGAGAGCAACCCAAAATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGGTATCATCACTTTCCTTTTCTTTTGATTGAACTTCCTGTTCAACATCTGTTTTCGCTTTAAATTCTTAGGTTTACCGTTTTCCTTGGATTTTTGTTCATATGTCATCTTTCTGTATGTATTCTTGTTTTTTTTACCATTGGTGTAATATATTCCGACGTACGAGTTTGTTTAAAGGAGGTTGAAATTAGTCATTTCGGATCATTCGACCACTAGGATGAATTTCATTGCTGGAAAGTTTAACGTTTCAAGGAAATTTTGTGAGAGAAAAAACATTCAGAAATCTTTAAGAGAACGAGAAATAGGAAACGACTCTTCGAGCCTTGAATTGTGGTAATAAATGAATATATTGTGATAATCAATCGGTAATCTCCCGATTCGATCTTAGAGCCTTAGATTTGTGTTGAATTTTGGACCTCAAGGAATTTTATGACTCCGTATGTTCCTGTTGGAATTTATTAAACAGTTTTAATGACCAGAACTAGCTGCAGCATTGGTTCATTCTTCCTTTTGCTATATTTCAAGGCTAGATATTTGAAATGTTTTCATGCTTGCATGCATACATCTTGTTATTATTGGTCCTTCAATTTGAATCACCTTCTCTGGCAGTGATTTAGTATTGAGTATGAGATTTTAATCAATCAATCTTTTCTGTCTCGAAAGGTTCTATTTCAGCTTCAATCTTCTCAACGTCCCTTGTTTAAACAAGCAAACAATGTAAATTCCTTAGATCTTAAATAATTATGGGACGGAAGCATGGATTTTTCTTCATTATCAGTAACCCAAAAATCCACTCACTTCAGCTTATTTGCGGTAATAATTTTTCTTAAGAAGGAGCTTGTGTCAGGGTTTTTTCTCTTGTTATCACGAAATGATAAATATTATGTGTATTTCTCTTAATTTCATCTATTTACTTATTTTCACCCTTTTCTGTTCAATTTCATCAGTCGTGTTACTTTAGTTTTCACTTTCATTGTCCGTGAATGTTGAGTATCGTTAACAAGCCGTCTCATGTGATTCAGAACTGGAAATCTCAAACAATGAAGCTTTTGAAATTCTTAAATTTGCATCACATGGTAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAATGGTATAGTTTCCTCTTTGCTTAGTTTATTTTTTGAAAGCAACAGTAAGAAGAAAACTGTGAACTGTGTGACTTATGAAATAAAAAATAAGGTGCACATGATCGGTTTTTAATGTCATCCCTTTGTTGGATCTGGAAGTTTTTTCATTAATACTTCATAGTTTGCTCAAAATAGATGTAGTTATCTAAATGAATAGACAAAATTGGCTCTTTTCTTTCTTTCTTTCTTCATTTTTAATGACAATTTTTTCAAATGTATGTTCCTTTTTATGAAGTTTCAACTATGTTTTAGATAAAAATAAAATAAAACTGCTACTGTTAACTTATTCACAGAGTGGTTTACTTCCATTAATTGGTTATGATGTATTTGTGTGTATCATGTTTCTTCTGCCAAGCAATTTCTTCCTTATTGAATCATCTCATTAGTTGCAATCTTCTCATAGATCAAAAATACTTTATCAAAAGTGCAGATATCTTATGATATAACTTGATGTGTTCATTTACTATCGCATACTTTAATAGATTAATGTACTATCAGTCAATTGATTGGTGGTTATCCTTTTTTTTTTTTTTTTTGGTCTGTTTAAAATACTTCCACATCTAATTACTTCATTATTTTCTAATTATTATTAATATATCGTGGAACCAGCTCTGATCAATCCATGTAATTTCAAATATCTATTTTGGAATTTTTATCTAGGACAGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAATTAATAGCAGTGAGGTTACGGAAATTGGTTAGTGATTGTTATTCTTTCTCTGGTCAGTTGCATTATTACGTGTAATGAATACATTATATTCTCCCCTTTATTTTCTGAAGAAACATGCACGTTAGAATGGAATGTCAACTCATGTTCTCGATTGAAATATCTCAATCTCGCCCTTTTTTGTTTGAATGTCAACTCATGTTTTATTATTATGCTTTTAGTAGAGACATGAACATTTAATTTATTTATTTTTGCCAGGTGGAGTACCGGGTATTGGTAAAACACAGCTTGGGTATGGATTTTTGTTGTATGTTTCTTTGCCAGTGTGAAAATTATTCTTTGTTATACAGAAATAAAATGACATAATGTTTATTTTGCATCGAGTAACAGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGATGGAAAAGCAGTTTATATAGGTAGGTTCCCATTCCAGATTTTGCTTCCAATGCTTTTGAAATTTTTTCTAGCAATCTATATTTGCAATCTAGTTAGGAACATGGCTTTCCTTGATGTTTAGATACAGAAGGGAGCTTTATGGTGGAGCGCGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTAGGTAGAATTTTCTTTAACTCTTTACACTACTATCAAGTGTCTAGGAAAATAATTCAGATATTTGTATGCTGCTTGGAAGCTTTCTTCTTTTGTCTTGAGTAAATTGTTGTTTTTCTTGATTTGGATACTTCTAACCAAAAAGTTCTCTGAATTACAACATTTTTTTTTCCTAGATCTTCTTTGTTGGCCTTCAGTTCAAGTATTTTGATAATTACTGATTATTTCTTTGCAGGTTAAGGTTATCATAGTTGATAGTGTGACGTTCCATTTCCGCCAAAATTTTGATGACTTGGCGCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTAAGAATCAGTTATCTCATTATAATGTTTCAAACTAACATATATGGTAGAGTGTCAACTTAAATTGACACAAGTAGTGATTTATATAGTTGAATGTGTCTCAACTTTATTAGCAAGCATGGACACTTTAAACTAGCACATTGAATAAGTTATATATATATACACACACACGGACAATTTGACTCGTGGGGATAACAAAAATCAGCGTATTTGACTAATAAACTTCGAATTTCTCAATATCATGTCACATTTAGAACATGTAGAAATATTTTGAATTCTCGATACATTTTTTCTAATACAAGATTCAGCATGATATAAGTAAATCATTTAAATGGATGAGCCCATATCTTTGAATAAGATATTTTTCTTCCTAAGCCCCTTCCATATCATGCCAATGTCCTGAATTTGCATCTATACTCAACCAATGCTGAGAGAAACACACATATGCTTGGTTATGTCACTTTACCGTTTTTATTTTACGTATCATTTTCCTCCTAATTTCTTGTTCCATTCATGCTAGTAGTGACTAATTTGTTCTATTGCTTTTTACTCCTCATTTCTCCGACTCTTTGGCAGGTTGTTCTATTGAATCAGGTCACCACTAAGTTCACCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTATGTCATTTTTAAGTCTCCTCCTACCTTTCACTGTTAAAAATCATTGTTGATCTGTCAGTTGTTGCACCCCCTTGGATGTCGTTAAGCATTCTGATTCCATTGAGTTGATTAGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCAATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAAAGATTTGAAACACCTTTAAAGCTCACATGAATTCATGTTGTTCTCACGCTTCATCTAATTTAAGTATGGAATTATCTGAATGGTTCTTGGTTCTTTCTATGATATGGGAAATTGAAAGTTGCCCCTTTTTGTTGAAGAGATGCGTATATTTATCTTCTTGCTGCAGTTGGAATCTTTTTCATGAATTTTCTCTCTTTAGCCGGTAAATCATAAATGGCTCAAAGGGATTCTTATCTTTTTTTAGGTAAAGTAATATAATTTCTTTTTAG

mRNA sequence

AAAAAAAACAGTTTTTGAAAGGGGTCTTTTTCCAAATTCAAAACATTTAGAGGCTATTTTTCTAAAATTACCCCTGCGCGCGCCGTAGAAACCTTACTCCTTTCATTTCGTCGGCGATTGCCAATAGTGTTACTCGGAGATACAGAGAGCAACCCAAAATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCAAACAATGAAGCTTTTGAAATTCTTAAATTTGCATCACATGGTAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAATGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAATTAATAGCAGTGAGGTTACGGAAATTGGTGGAGTACCGGGTATTGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGATGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGCGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACGTTCCATTTCCGCCAAAATTTTGATGACTTGGCGCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCACCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCAATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAAAGATTTGAAACACCTTTAAAGCTCACATGAATTCATGTTGTTCTCACGCTTCATCTAATTTAAGTATGGAATTATCTGAATGGTTCTTGGTTCTTTCTATGATATGGGAAATTGAAAGTTGCCCCTTTTTGTTGAAGAGATGCGTATATTTATCTTCTTGCTGCAGTTGGAATCTTTTTCATGAATTTTCTCTCTTTAGCCGGTAAATCATAAATGGCTCAAAGGGATTCTTATCTTTTTTTAGGTAAAGTAATATAATTTCTTTTTAG

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCAAACAATGAAGCTTTTGAAATTCTTAAATTTGCATCACATGGTAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAATGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAATTAATAGCAGTGAGGTTACGGAAATTGGTGGAGTACCGGGTATTGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGATGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGCGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACGTTCCATTTCCGCCAAAATTTTGATGACTTGGCGCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCACCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCAATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAA

Protein sequence

MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI
Homology
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BLAST of CmaCh06G011430 vs. Swiss-Prot
Match: RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2)

HSP 1 Score: 506.5 bits (1303), Expect = 2.3e-142
Identity = 254/346 (73.41%), Postives = 304/346 (87.86%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I+  EAFEILK A+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSCC-- 81

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  --NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           Q+GIQL+VNVQIP   GGL GKA+YIDTEGSFMVERA+QIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
            +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KFI+E+KDVKV+IVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS+SS+KR KM+
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

[Close]
BLAST of CmaCh06G011430 vs. Swiss-Prot
Match: RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.6e-71
Identity = 149/349 (42.69%), Postives = 225/349 (64.47%), Query Frame = 1 

Query: 2   EVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLDR 61
           E+   P+S T+R KL++AG+ T   +  V PS+L++E+ IS  EA E L+     S  D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  PDGSGAIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 121
           P  +GA V G + TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 181
           QL +QLAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +  + +       
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHL--HLIAGTHKDE 183

Query: 182 PHQVQIQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQ 241
            HQ  ++    ++IL +I+YFR   YTE +A V  L  F++ H  V+++I+D +   FR 
Sbjct: 184 EHQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCT 301
           + DDL+LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAAT 303

Query: 302 NRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNS--TSSNKRTK 345
            R+I +W   +R+A L KSPS + ++ P+ +T +G R++  T+S+ +T+
Sbjct: 304 IRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

[Close]
BLAST of CmaCh06G011430 vs. Swiss-Prot
Match: RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.0e-69
Identity = 146/346 (42.20%), Postives = 222/346 (64.16%), Query Frame = 1 

Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLDRPDGSG 66
           P+S  +RGKL++AG+ T   +  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  -AIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
            ++ N   TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +     L+    T  + Q
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLH----LIAGTHTEEEHQ 188

Query: 187 IQPKD-----ILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 246
              KD     IL +I+YFR   YTE +A V  L  F+++H  V+++I+D + F FR + +
Sbjct: 189 KALKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLE 248

Query: 247 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 306
           DL+LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T R+
Sbjct: 249 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRL 308

Query: 307 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNS--TSSNKRTK 345
           I +W   +R+A L KSPS + ++ P+ +T +G R++  T+++ +T+
Sbjct: 309 IFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

[Close]
BLAST of CmaCh06G011430 vs. Swiss-Prot
Match: RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.7e-66
Identity = 140/334 (41.92%), Postives = 208/334 (62.28%), Query Frame = 1 

Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLDRPDGSG 66
           P+S  +R KL+SAG+ T   L  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAG 77

Query: 67  AIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
              +  + TA ++L +E     I T C+ LD++LGGG+   + TEI G PG+GKTQL +Q
Sbjct: 78  TSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQ 137

Query: 127 LAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +    +  K     H+  
Sbjct: 138 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ--LIAEKHKGEEHRKA 197

Query: 187 IQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 246
           ++     +IL +I+YFR   YTE +A V  L  F++EH  V+++IVD + F FR + DDL
Sbjct: 198 LEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDL 257

Query: 247 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA     AV+L NQ+TTK       L  ALG+SW H+ T R+I 
Sbjct: 258 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIF 317

Query: 307 YWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNS 337
           +W+  +R A L KSPS +  +  + +  +G R++
Sbjct: 318 HWDRKQRLATLYKSPSQKECTVLFQIKPQGFRDT 349

[Close]
BLAST of CmaCh06G011430 vs. Swiss-Prot
Match: RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.3e-52
Identity = 107/250 (42.80%), Postives = 160/250 (64.00%), Query Frame = 1 

Query: 88  ITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLDGKAVYID 147
           I T C+++D +L GG    ++TEI GVPGIGKT +  QL VN  IP   GG+ GKA+YID
Sbjct: 64  IITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYID 123

Query: 148 TEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQI 207
           TEGS+  +R  ++A   +  +    VL+K   T        + +L +I+Y+RV  Y E I
Sbjct: 124 TEGSYSCQRVREMATHLVNHLE--CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEII 183

Query: 208 ALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAV 267
           +L++ L  F+ ++KDVK+I+VDS+T+ FR +F D+ LRTR L  +A  LM +A ++N AV
Sbjct: 184 SLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYNLAV 243

Query: 268 VLLNQVTTKFTEGSFQLTLA--LGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAP 327
           V++NQVTTK +    +  L   LG+SW+H CT R++L+W   +R+ +L KSPS +S   P
Sbjct: 244 VVMNQVTTKISPNQKESILVPYLGESWTHICTYRMVLFWKQKQRFCHLYKSPSFKSCFTP 303

Query: 328 YSVTCRGIRN 336
           + +   GIR+
Sbjct: 304 FDIVEYGIRD 311

[Close]
BLAST of CmaCh06G011430 vs. TrEMBL
Match: A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 2.3e-178
Identity = 319/346 (92.20%), Postives = 333/346 (96.24%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF++LK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+ GKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of CmaCh06G011430 vs. TrEMBL
Match: D7U7X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 3.6e-147
Identity = 267/346 (77.17%), Postives = 309/346 (89.31%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           ME+ RLPISA+ RGKLISAGYT+LSSL+S+SPS LA++L+IS+NEA EIL+  S GSRLD
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           +PDGS AIVNGA+TAWDMLH+E+ L  ITTSC DLD++LGGGI   EVTEIGGVPGIGKT
Sbjct: 61  KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP  +GGL GKA+YIDTEGSFM+ER++QIAEACIEDM+  S  ++K+  
Sbjct: 121 QLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQ 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV+ QPKD L+NIFYFRVCSYTEQIA++NYLDKFI+EHKDV V+I+DSVTFHFRQ+FD
Sbjct: 181 SCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLMKLAKKF+ AVVLLNQVTTK TEGSFQLTLALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL+SASAPYSVT +GIR +TS  KR K++
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346

[Close]
BLAST of CmaCh06G011430 vs. TrEMBL
Match: W9RJ62_9ROSA (DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 5.8e-145
Identity = 261/346 (75.43%), Postives = 306/346 (88.44%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISA+ RGKLI AGYTTLSSL+S+SPSDLAREL ++N+EA EILK AS  SRLD
Sbjct: 1   MEVGRLPISASQRGKLIRAGYTTLSSLSSLSPSDLARELNVTNSEALEILKVASLNSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DG  AI NGA+TAWDMLH+EQLL RITTSCADLDN+LGGGIN  EVTEIGGVPGIGKT
Sbjct: 61  RTDGGHAIFNGAQTAWDMLHEEQLLRRITTSCADLDNILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP   GGL GKAVYIDTEGSFMVERA+QIAEA + DM +Y+ L++K   
Sbjct: 121 QLGIQLAVNVQIPVDLGGLGGKAVYIDTEGSFMVERALQIAEASVLDMVEYNDLLRKEHR 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV ++P D+LE+I+YFR+CSYTEQ+A+++YLDKFI+ HKDVK++IVDSVTFHFRQ+F+
Sbjct: 181 KCQVNLKPNDLLESIYYFRICSYTEQMAVISYLDKFISAHKDVKIVIVDSVTFHFRQDFE 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLM LAK +N AVV+ NQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMNLAKTYNLAVVIFNQVTTKYMEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGD+RYA+++KSPSL+SASAP+SVT +GIRNS S++KR K++
Sbjct: 301 ILYWNGDDRYAFIDKSPSLRSASAPFSVTGKGIRNSASNHKRIKLM 346

[Close]
BLAST of CmaCh06G011430 vs. TrEMBL
Match: A0A061E1X4_THECC (RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 4.6e-142
Identity = 259/348 (74.43%), Postives = 305/348 (87.64%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSR-- 60
           ME+ RLPISA+ RGKLISAGYTTLSSL+S+S SDLARE ++S +EA +ILKFASH     
Sbjct: 1   MEIWRLPISASQRGKLISAGYTTLSSLSSISSSDLARESKVSESEALDILKFASHSHSGG 60

Query: 61  LDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIG 120
            +   G+ +I  GA+ AWDMLH+E+ L  ITTS ADLDN+LGGGI+  EVTEIGGVPGIG
Sbjct: 61  WEMSSGNCSIFEGAQNAWDMLHEEESLVHITTSSADLDNILGGGIHCKEVTEIGGVPGIG 120

Query: 121 KTQLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKN 180
           KTQLGIQ+AVNVQIP  FGGL GKA+YIDTEGSFMVERA+QIAEACIEDM++Y+  ++K+
Sbjct: 121 KTQLGIQIAVNVQIPHGFGGLGGKAIYIDTEGSFMVERALQIAEACIEDMSEYNRFIRKD 180

Query: 181 ATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQN 240
               ++++QPKDIL NIFYFR+CSYTEQIAL+NYLDKFI+EHKDVKV++VDSVTFHFRQ+
Sbjct: 181 FQACEIRMQPKDILGNIFYFRICSYTEQIALINYLDKFISEHKDVKVVVVDSVTFHFRQD 240

Query: 241 FDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTN 300
           FDD+ALRTR+LS MALKLMKLAKKF+ AVVLLNQVTTK TEGSFQL LALGDSWSH+CTN
Sbjct: 241 FDDMALRTRVLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLALALGDSWSHTCTN 300

Query: 301 RIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           RI+LYWNG+ERYAY++KSPSL+SASA YSVT RGIRNS+SS KR KM+
Sbjct: 301 RIVLYWNGNERYAYIDKSPSLRSASAAYSVTRRGIRNSSSSCKRIKMM 348

[Close]
BLAST of CmaCh06G011430 vs. TrEMBL
Match: M5X6P1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007713mg PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 1.0e-141
Identity = 262/358 (73.18%), Postives = 303/358 (84.64%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISA+ RGKLISAGYTTL+SL+S+S SDLAR+L+I  +EAFEILK ASH  RLD
Sbjct: 1   MEVGRLPISASQRGKLISAGYTTLASLSSLSSSDLARDLKIPESEAFEILKVASHDCRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           +PD S  I  GA+TAW+MLH+EQL PRITTSCADLDN+LGGGIN  EVTEIGGVPGIGKT
Sbjct: 61  QPDKSNGIFTGAQTAWEMLHEEQLFPRITTSCADLDNILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP  FGGL GKAVYIDTEGSFMVERA+QIAEA + DM+ Y+ L+ K   
Sbjct: 121 QLGIQLAVNVQIPVDFGGLGGKAVYIDTEGSFMVERALQIAEASVVDMSHYNELLWKELR 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV+IQP DIL+NIFYFR+CSYTEQIAL+N+LDKFI EHKDVK++I+DSVTFHFRQ+F+
Sbjct: 181 TCQVEIQPTDILKNIFYFRICSYTEQIALINHLDKFILEHKDVKIVIIDSVTFHFRQDFE 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA------------VVLLNQVTTKFTEGSFQLTLAL 300
           DLALRTRLL  MALKLM LA K+N A            VV+ NQVTTK  EGSFQL+LAL
Sbjct: 241 DLALRTRLLGGMALKLMNLANKYNLAVSNMIASYSLWQVVIFNQVTTKHKEGSFQLSLAL 300

Query: 301 GDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           GDSWSH CTNR+ILYWNGDER A+++KSPSL+SASAP+SVT +GIRNS S++KR K++
Sbjct: 301 GDSWSHCCTNRVILYWNGDERNAHIDKSPSLKSASAPFSVTRKGIRNSASNHKRIKLM 358

[Close]
BLAST of CmaCh06G011430 vs. TAIR10
Match: AT2G45280.2 (AT2G45280.2 RAS associated with diabetes protein 51C)

HSP 1 Score: 492.3 bits (1266), Expect = 2.5e-139
Identity = 254/370 (68.65%), Postives = 303/370 (81.89%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISNNEAFEILKFASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLD 120
               I+  EAFEILK A+        +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQSCC----NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVER 180
           N+LGGGI+  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GGL GKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 AVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKF 240
           A+QIAEAC+EDM +Y+  + K+   +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTK 300
           I+E+KDVKV+IVDS+TFHFRQ++DDLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

Query: 301 FTEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNS 347
           F+EGSFQL LALGDSWSHSCTNR+ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS
Sbjct: 322 FSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNS 381

[Close]
BLAST of CmaCh06G011430 vs. TAIR10
Match: AT3G22880.1 (AT3G22880.1 DNA repair (Rad51) family protein)

HSP 1 Score: 125.6 bits (314), Expect = 6.1e-29
Identity = 98/277 (35.38%), Postives = 143/277 (51.62%), Query Frame = 1 

Query: 68  IVN-GAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQL 127
           IVN G  T  D L K + + +ITT C  LD+LLGGGI +S +TE  G    GKTQL   L
Sbjct: 87  IVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTL 146

Query: 128 AVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQI 187
            V  Q+P    G +GK  YIDTEG+F  +R V IAE                    +  +
Sbjct: 147 CVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGM 206

Query: 188 QPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNF---DDLA 247
            P  +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA
Sbjct: 207 DPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELA 266

Query: 248 LRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSF---QLTLALGDSWSHSCTNRI 307
            R + L++M  +L+K+A++FN AV + NQV      G F       A G   +H+ T R+
Sbjct: 267 DRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRL 326

Query: 308 IL-YWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNS 337
           +     GD R   +  +P+L  A A + +T  GI ++
Sbjct: 327 LFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIADA 342

[Close]
BLAST of CmaCh06G011430 vs. TAIR10
Match: AT5G20850.1 (AT5G20850.1 RAS associated with diabetes protein 51)

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-23
Identity = 95/327 (29.05%), Postives = 152/327 (46.48%), Query Frame = 1 

Query: 15  KLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLDRPDGSGAIVNGAET 74
           KL  AG  T+  +A     DL +   IS+ +  +I++ AS             +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASK-----------LVPLGFTS 102

Query: 75  AWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  +  + Q + +IT+   +LD +L GGI +  +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILEN 194
             GG +GKA+YID EG+F  +R +QIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 282

Query: 255 MALKLMKLAKKFNSAVVLLNQVTTKFTEGSF----QLTLALGDSWSHSCTNRIIL-YWNG 314
               L KLA +F  AVV+ NQV  +    +     Q     G+  +H+ T R+ L     
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLALRKGRA 337

Query: 315 DERYAYLEKSPSLQSASAPYSVTCRGI 334
           +ER   +  SP L  A A + ++  G+
Sbjct: 343 EERICKVISSPCLPEAEARFQISTEGV 337

[Close]
BLAST of CmaCh06G011430 vs. TAIR10
Match: AT5G57450.1 (AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3))

HSP 1 Score: 95.5 bits (236), Expect = 6.8e-20
Identity = 68/212 (32.08%), Postives = 109/212 (51.42%), Query Frame = 1 

Query: 70  NGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVN 129
           NG     ++L +     ++TT C  LD  L GGI+   +TEI    G GKTQL +QL++ 
Sbjct: 3   NGKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLC 62

Query: 130 VQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPK 189
            Q+P + GGL+G ++Y+ +E  F   R  Q++       ++ S+    N  P        
Sbjct: 63  TQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP-------- 122

Query: 190 DILENIFYFRVCSYTEQIALVNYLDKFITEHK---DVKVIIVDSVTFHFRQNFD----DL 249
              +++F   V S      ++  +D F+   K    +K+I++DSV   FR  FD    DL
Sbjct: 123 --CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDL 182

Query: 250 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVT 275
             R+ L  +++ KL +LA KF+ A+V+ NQVT
Sbjct: 183 KKRSSLFFKISGKLKQLASKFDLAIVITNQVT 202

[Close]
BLAST of CmaCh06G011430 vs. TAIR10
Match: AT2G28560.1 (AT2G28560.1 DNA repair (Rad51) family protein)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-17
Identity = 82/352 (23.30%), Postives = 143/352 (40.62%), Query Frame = 1 

Query: 3   VGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLDRP 62
           +G + +   +     +    T     S++  +L   L++   E    + F S  +     
Sbjct: 6   IGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEATSPPCQ 65

Query: 63  DGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQL 122
                +    E        E L   + T    LD+ L GGI    +TE+ G PGIGK+Q 
Sbjct: 66  SARSLLEKKVEN-------EHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQF 125

Query: 123 GIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPH 182
            ++LA++   P A+GGLDG+ +YID E  F   R +++      ++              
Sbjct: 126 CMKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEV-------------F 185

Query: 183 QVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 242
            ++   +++   I   R  S       +  L   I +++ VK++++DS+T          
Sbjct: 186 HLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQ-VKLLVIDSMTALLSGENKPG 245

Query: 243 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTT----KFTEGSFQ--------------- 302
           A R   L      L  LA+     +V+ NQV +    + ++ SFQ               
Sbjct: 246 AQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYD 305

Query: 303 --LTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGI 334
             L  ALG +W+H+ T R++L     +R   + KSP     + P+ +T  GI
Sbjct: 306 SHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGI 336

[Close]
BLAST of CmaCh06G011430 vs. NCBI nr
Match: gi|449432271|ref|XP_004133923.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 632.9 bits (1631), Expect = 3.3e-178
Identity = 319/346 (92.20%), Postives = 333/346 (96.24%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF++LK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+ GKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of CmaCh06G011430 vs. NCBI nr
Match: gi|659075500|ref|XP_008438178.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 632.1 bits (1629), Expect = 5.7e-178
Identity = 319/346 (92.20%), Postives = 335/346 (96.82%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFE+LK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+ GKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKF+ AVVL NQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 346

[Close]
BLAST of CmaCh06G011430 vs. NCBI nr
Match: gi|659075498|ref|XP_008438177.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo])

HSP 1 Score: 625.2 bits (1611), Expect = 7.0e-176
Identity = 319/353 (90.37%), Postives = 335/353 (94.90%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFE+LK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+ GKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA-------VVLLNQVTTKFTEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKF+ A       VVL NQVTTKF EGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 353

[Close]
BLAST of CmaCh06G011430 vs. NCBI nr
Match: gi|778677460|ref|XP_011650791.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 623.2 bits (1606), Expect = 2.7e-175
Identity = 317/346 (91.62%), Postives = 331/346 (95.66%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF++LK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+ GKAVYI  EGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 344

[Close]
BLAST of CmaCh06G011430 vs. NCBI nr
Match: gi|1009142354|ref|XP_015888679.1| (PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 534.6 bits (1376), Expect = 1.2e-148
Identity = 265/346 (76.59%), Postives = 309/346 (89.31%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60
           MEVGRLPISA+ RGKLISAGYT+LSSL+S+SPSDLA++L I  +EA EILK AS  SRLD
Sbjct: 1   MEVGRLPISASQRGKLISAGYTSLSSLSSLSPSDLAKDLNIPESEALEILKVASLTSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           + DG+ A VNGA+TAWDMLH+EQL PRITTSCAD+D +LGGGIN  EVTEIGGVPGIGKT
Sbjct: 61  KQDGNHAFVNGAQTAWDMLHEEQLFPRITTSCADMDEILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP  +GGL GKA+YIDTEGSFMVERA QIAEAC+ DM++Y+ L++K   
Sbjct: 121 QLGIQLAVNVQIPVEYGGLGGKAIYIDTEGSFMVERAQQIAEACVVDMSEYNDLLRKGNR 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV+IQP DILENIFYFR+CSYTEQIAL+NYLD+FI+EHKDVK++IVDSVTFHFRQ+FD
Sbjct: 181 ACQVRIQPNDILENIFYFRICSYTEQIALINYLDRFISEHKDVKIVIVDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLL  MALKLM LA+ ++ AVV+ NQVTTK+TEGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLGGMALKLMNLARNYSLAVVIFNQVTTKYTEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL+SASAP+SVT +GIRNS S++KR +M+
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPFSVTSKGIRNSASNHKRIRMM 346

The following BLAST results are available for this feature:
BLAST of CmaCh06G011430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA51C_ARATH2.3e-14273.41DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2[more]
RA51C_CRIGR3.6e-7142.69DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1[more]
RA51C_MOUSE2.0e-6942.20DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1[more]
RA51C_HUMAN7.7e-6641.92DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1[more]
RA51C_DICDI8.3e-5242.80DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV... [more]
BLAST of CmaCh06G011430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3U2_CUCSA2.3e-17892.20Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1[more]
D7U7X0_VITVI3.6e-14777.17Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=... [more]
W9RJ62_9ROSA5.8e-14575.43DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 S... [more]
A0A061E1X4_THECC4.6e-14274.43RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 S... [more]
M5X6P1_PRUPE1.0e-14173.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007713mg PE=4 SV=1[more]
BLAST of CmaCh06G011430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45280.22.5e-13968.65 RAS associated with diabetes protein 51C[more]
AT3G22880.16.1e-2935.38 DNA repair (Rad51) family protein[more]
AT5G20850.11.3e-2329.05 RAS associated with diabetes protein 51[more]
AT5G57450.16.8e-2032.08 homolog of X-ray repair cross complementing 3 (XRCC3)[more]
AT2G28560.11.4e-1723.30 DNA repair (Rad51) family protein[more]
BLAST of CmaCh06G011430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432271|ref|XP_004133923.1|3.3e-17892.20PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus][more]
gi|659075500|ref|XP_008438178.1|5.7e-17892.20PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo][more]
gi|659075498|ref|XP_008438177.1|7.0e-17690.37PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo][more]
gi|778677460|ref|XP_011650791.1|2.7e-17591.62PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus][more]
gi|1009142354|ref|XP_015888679.1|1.2e-14876.59PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010995DNA_repair_Rad51/TF_NusA_a-hlx
IPR013632DNA_recomb/repair_Rad51_C
IPR016467DNA_recomb/repair_RecA-like
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045003 double-strand break repair via synthesis-dependent strand annealing
biological_process GO:0006281 DNA repair
biological_process GO:0007143 female meiotic division
biological_process GO:0007141 male meiosis I
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0016444 somatic cell DNA recombination
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G011430.1CmaCh06G011430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helicalunknownSSF47794Rad51 N-terminal domain-likecoord: 6..54
score: 2.
IPR013632DNA recombination and repair protein Rad51, C-terminalPFAMPF08423Rad51coord: 71..335
score: 3.4
IPR016467DNA recombination and repair protein, RecA-likePIRPIRSF005856Rad51coord: 1..339
score: 7.5
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 84..273
score: 55
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 86..335
score: 4.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 86..334
score: 1.06
NoneNo IPR availableGENE3DG3DSA:1.10.150.20coord: 8..53
score: 8.
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 1..342
score: 5.9E
NoneNo IPR availablePANTHERPTHR22942:SF14DNA REPAIR PROTEIN RAD51 HOMOLOG 3coord: 1..342
score: 5.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G011430Cucsa.257540Cucumber (Gy14) v1cgycmaB0727
CmaCh06G011430Cla021319Watermelon (97103) v1cmawmB798
CmaCh06G011430Csa3G126250Cucumber (Chinese Long) v2cmacuB814
CmaCh06G011430MELO3C006201Melon (DHL92) v3.5.1cmameB763
CmaCh06G011430ClCG05G002360Watermelon (Charleston Gray)cmawcgB737
CmaCh06G011430CSPI03G09670Wild cucumber (PI 183967)cmacpiB826
CmaCh06G011430CmoCh06G011690Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G011430Lsi05G019490Bottle gourd (USVL1VR-Ls)cmalsiB764
CmaCh06G011430Cp4.1LG08g02080Cucurbita pepo (Zucchini)cmacpeB854
CmaCh06G011430MELO3C006201.2Melon (DHL92) v3.6.1cmamedB863
CmaCh06G011430CsaV3_3G009800Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G011430Cla97C05G082870Watermelon (97103) v2cmawmbB856
CmaCh06G011430Bhi01G000176Wax gourdcmawgoB1016
CmaCh06G011430CsGy3G009760Cucumber (Gy14) v2cgybcmaB427
CmaCh06G011430Carg06375Silver-seed gourdcarcmaB1325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G011430Melon (DHL92) v3.6.1cmamedB848
CmaCh06G011430Silver-seed gourdcarcmaB0317
CmaCh06G011430Silver-seed gourdcarcmaB0877
CmaCh06G011430Cucumber (Chinese Long) v3cmacucB0996
CmaCh06G011430Watermelon (97103) v2cmawmbB864
CmaCh06G011430Wax gourdcmawgoB1004
CmaCh06G011430Cucurbita maxima (Rimu)cmacmaB285
CmaCh06G011430Cucurbita maxima (Rimu)cmacmaB370
CmaCh06G011430Cucumber (Gy14) v1cgycmaB1007
CmaCh06G011430Cucurbita moschata (Rifu)cmacmoB811
CmaCh06G011430Cucurbita moschata (Rifu)cmacmoB797
CmaCh06G011430Wild cucumber (PI 183967)cmacpiB856
CmaCh06G011430Cucumber (Chinese Long) v2cmacuB841
CmaCh06G011430Melon (DHL92) v3.5.1cmameB748
CmaCh06G011430Watermelon (Charleston Gray)cmawcgB744
CmaCh06G011430Watermelon (97103) v1cmawmB810
CmaCh06G011430Cucurbita pepo (Zucchini)cmacpeB837
CmaCh06G011430Cucurbita pepo (Zucchini)cmacpeB811
CmaCh06G011430Cucurbita pepo (Zucchini)cmacpeB825
CmaCh06G011430Bottle gourd (USVL1VR-Ls)cmalsiB743
CmaCh06G011430Cucumber (Gy14) v2cgybcmaB853