Carg06375 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06375
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DNA repair protein RAD51 homolog 3
Location	Cucurbita_argyrosperma_scaffold_016 : 1266692 .. 1271091 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGGTATCATCACTTTCCTTTTCTTTTGATTGAACTTCCTGTTCAACATCTGTTTTCGCTTTAAATTCTTAGGTTTTCCGTTTTCTTTGGATTTTTATTCATATGTCATCGTTCTGTGTGTATTCTTGTTTTTTTTACCACTGGTGTTATATAATCCGACGCACGAGTTTGTTTAAAGGAGGTTGAAATTAGCCATTTCGGATCATTCGACCACTAGGATGAATTTCATTGCTGGAAAGTTTAACGTTTCAAGGAAATTTTATAAGAGAAAAAACATTCGGAAATCTCGAAGAGAACGAGAAATAGGAAACGACTCTTCGAGCCTTGAATTGTTGTAATGAATGAATATATTGTGATAATCAATCCGTAATCTCCTGAGTAGATCTTTTGACTTATGACTGTTGTTAATTTGAATTTCTGTTGCATAAATATAAAAAAGACTCAATGGATTAGATTAGATTTATGTTGAATTTTGGACCTCAAGGAATTTTATGACTCCGTATGTTCCTGTTGGAATTTATTAAACAGTTTTAATGACCAGAACTAGCTGCAGCATTGGTTCATTCTTCCTTTTGCTATATTTCAAGGCTAGATAATTTGAAATGTTTTCATGCTTGCATGCATACATCTTGTTATTATTGGTCCTTCAATTTGAACCACCTTCTCTGGCAGTGATTTAGAATTGAGTATGAGATTTTAATCAATCAATCTTTTCTGTCTCGAAAGGTTCTATTTCAGCTTCAATCTTCTCAACGTCCCTTGTTTAAACAAGCAAACAATGTAAATTCCTTTGATCTTAAATAATGATGGGACGGAAGCATGAATTTTTCTTCATTATCAGTAACCCAAAAATCCACTCACTTCAGCTTATTTGCGGGAATAGTTTTTCTTGAGAAGTAGCTTGTCTCAGGGTTTTCTTTTCTTGTTATCACGAAATGATAAATCTTGTGTATTTCTCTTCATTTCATCTATTTACTTATTTTCACCCTTTTCTGTTCAATTTCATCGGTCCTGTTACTTTAGTTTTCACTTTCATTGTCTGTGAATGTTGAGGGTTGCTAACAAGCCGTCTCATGTGATTCAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATCTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTACAGTTTCCTCTTTGCGTAGCTTATTTTTTGAAAGCAACAGTAAGAAGAAAACTGTGAACTGTGTGACTTATGAAATAAAAAATAAGGTGCACGTGATTTGTTTTTAATGTCATCCCTTTGTTGGATCTGGAAGTTTCTTCATTAAAGATGAGTACTTCATAGTTTGCTCAAAATAGATGTAGTTATCTAAATGAATAGACAAAATTGGCTCTTTTCTTTCTTTTTTTCTTCATTTTTAATGACAATTTTTTCATATGTATGTTCCTTTTTATGAAGTTTCAACTGTGTTTTAGATAAAAAATAAAACTGCTACTGTTAACTTATTCACAGAGTGGTTTACTTCCATTAATTGGTTATGATGTATTTGTGTGTATCATGTTTCTTCTGCCAAGCAATTTCTTCCTTATTGAATCATCTCATTGGTTCCAATCTTCTCATAGATAAAAAATACTTTATCAAAAGTGCAGGTATCTTATGGTATACCTTGATGTGTTCATTTACTATCACATAGTTGTTTAATAGATTAATGTACTATTGGTTGGTGGTTATCCTTTTTTTTTGGTCTGTTTAAAATACTTCCACATCTAATTACTTCATTATTTTCTAATTATTATTAATATATCGTGGAACCAGCTCTGATCAATCCATGTAATTTCAAATATCTATTTTGGAATTCTTATCTAGGACAGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTTAGTGATTGTTATTCTCTCTGGTCAGTTGCATTATTACGTGTAATGAATACATTATATTCTCCCCTTTATTTTCTGAAGAAACATGCACGTTAGAATGGAATGTCAATTCATGTTCTCGATTGAAATATCTTAATCTCGCCCTTTTTTGTTTGAATGTCAACTCATGTTTTATTATTATGCTTTTAGTAGAGATATAATCATTTTATTTATTTATTTTTGCCAGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGTATGGATTTTTGTTGTATGTTTCTCTCCCAGTGTGAAAATTATTCTTTGTCATACAGAAATAAAATGACATAATGTTTATTTTGCATCGAGTAACAGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGGTAGGTTTCCATTCCAGATTTTGCTTCCAATGCTTTTGAAATTTTTTCTAGCAATCTATATTTGCAATCTAGTTAGGAACATGGCTTTCCTTGATGTTTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTAGGTAGAATTTTCTTTAACTCTTTAAACTATTATCACTGTCTAGGAAAAGAATTCAGATACTTGTAGTTCTCTTGTTGTTCGAGTTTCTTGTATTACATTGCTTAATCGTTAATGATGCTGCTTGGAAGCTTTCTTCTTTTGTCTCAAGTAAATTGTTGTTTTTCTTGATTTGGATATTTCTAACCAAAAAGTTATCTGAATTACAATTTTTTTTCCTAGATCTTCTTTGTTGGCCTTCAGTTCAAGTATTTTGATAATTACTGATTATTTCTTTGCAGGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTAAGAATCAGTTATCTCATTATAATGTTTCAAACTAACATATATGGTAGAGTGTCAACTTAAATTGACATAAGTAGTGATTTACAAAGTTGAATGTGTCTCAACTTTATTAGCAAGCATGGACACTTTAAACTAGCACATTGAATAAGTTATATATATATATATACACACACACACAGACAATTTGACTCGTGGGAATAACAAAAATCAGTGTATTTGATTAATAAACTTCGAATTGCTCGATATCATGTCACATTTAGAACGTTTTGAAATATTTTGAATTCTCAATACATTTTTTCTAATACAAGATTCAGCATGATACAAGTAAATCATTTAAATGGATGAGAAATCCATATCTTTGAAGAAGATATTTTTCTTCCTATGCCCCTTTCATATCATGTCAATATCCTGAATTTGCATCTATACTCAACCAATGCTGAGAGAAACACACATATGCTTGGTTATGTCACTTTACCGTTTTTATTTTACGTATCATTTTCCTCCTAATTTCTTGTTTCATTCATGCTAGTAGTGACTAATTTGTTCTATTGTTTTTCTCCTCTTTTCTCCAACTCTTCGGCAGGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTATGTCATTTTTAAGTCTCCTCTTACCTTCCACTGTTAAAAATCATTGTTGATCTGTCACTTGTTGCACCCCCTTGGATGTCTTTAAGCATTCTGATTCCATTGAGTTGATTAGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAAAGATTTGAAACGCCTTTAAAACTCACATGAATTCATGTTGTTCTCTCATGCTTCATCTAATTTAAGTATGGAATTATCTGAATGGTTCTTGGTTCTTTCTATGATATGGGAAATTGAAAGTTGTCCCTTTTTGTTGAAAAATGCGTATATTTATGTTCTTGCTGCCGTTGGAATCTTTTTCA

mRNA sequence

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATCTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAAAGATTTGAAACGCCTTTAAAACTCACATGAATTCATGTTGTTCTCTCATGCTTCATCTAATTTAAGTATGGAATTATCTGAATGGTTCTTGGTTCTTTCTATGATATGGGAAATTGAAAGTTGTCCCTTTTTGTTGAAAAATGCGTATATTTATGTTCTTGCTGCCGTTGGAATCTTTTTCA

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATCTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAA

Protein sequence

MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI

Homology

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BLAST of Carg06375 vs. NCBI nr
Match: XP_022944720.1 (DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita moschata])

HSP 1 Score: 669.8 bits (1727), Expect = 4.8e-189
Identity = 345/346 (99.71%), Postives = 345/346 (99.71%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLK ASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Carg06375 vs. NCBI nr
Match: XP_023540197.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 2.6e-187
Identity = 341/346 (98.55%), Postives = 343/346 (99.13%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLAS SPSDLARELEISNNEAFE+LK ASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASASPSDLARELEISNNEAFEILKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDM+DYSVLVKKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMSDYSVLVKKNAM 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Carg06375 vs. NCBI nr
Match: XP_022944702.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 663.7 bits (1711), Expect = 3.4e-187
Identity = 345/351 (98.29%), Postives = 345/351 (98.29%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLK ASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLG-----IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180
           QLG     IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV
Sbjct: 121 QLGYGFLLIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180

Query: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240
           KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF
Sbjct: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240

Query: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300
           RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS
Sbjct: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300

Query: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 351

[Close]

BLAST of Carg06375 vs. NCBI nr
Match: XP_022974137.1 (DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 663.7 bits (1711), Expect = 3.4e-187
Identity = 341/346 (98.55%), Postives = 343/346 (99.13%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFE+LK ASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGL GKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Carg06375 vs. NCBI nr
Match: XP_022944729.1 (DNA repair protein RAD51 homolog 3 isoform X4 [Cucurbita moschata])

HSP 1 Score: 660.6 bits (1703), Expect = 2.9e-186
Identity = 343/346 (99.13%), Postives = 343/346 (99.13%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLK ASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYI  EGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYI--EGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 344

[Close]

BLAST of Carg06375 vs. TAIR10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C)

HSP 1 Score: 492.3 bits (1266), Expect = 2.5e-139
Identity = 254/370 (68.65%), Postives = 304/370 (82.16%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISNNEAFEVLKSASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLD 120
               I+  EAFE+LK A+        +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVER 180
           N+LGGGI+  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 AVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKF 240
           A+QIAEAC+EDM +Y+  + K+   +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTK 300
           I+E+KDVKV+IVDS+TFHFRQ++DDLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

Query: 301 FAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 347
           F+EGSFQL LALGDSWSHSCTNR+ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS
Sbjct: 322 FSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNS 381

[Close]

BLAST of Carg06375 vs. TAIR10
Match: AT3G22880.1 (DNA repair (Rad51) family protein)

HSP 1 Score: 125.6 bits (314), Expect = 6.1e-29
Identity = 98/277 (35.38%), Postives = 142/277 (51.26%), Query Frame = 0


Query: 68  IVN-GAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQL 127
           IVN G  T  D L K + + +ITT C  LD+LLGGGI +S +TE  G    GKTQL   L
Sbjct: 87  IVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTL 146

Query: 128 AVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQI 187
            V  Q+P    G  GK  YIDTEG+F  +R V IAE                    +  +
Sbjct: 147 CVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGM 206

Query: 188 QPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNF---DDLA 247
            P  +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA
Sbjct: 207 DPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELA 266

Query: 248 LRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSF---QLTLALGDSWSHSCTNRI 307
            R + L++M  +L+K+A++FN AV + NQV      G F       A G   +H+ T R+
Sbjct: 267 DRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRL 326

Query: 308 IL-YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 337
           +     GD R   +  +P+L  A A + +T  GI ++
Sbjct: 327 LFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIADA 342

[Close]

BLAST of Carg06375 vs. TAIR10
Match: AT5G20850.1 (RAS associated with diabetes protein 51)

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-23
Identity = 96/328 (29.27%), Postives = 154/328 (46.95%), Query Frame = 0


Query: 15  KLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLDRPDGSGAIVNGAET 74
           KL  AG  T+  +A     DL +   IS+ +  +++++AS             +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASK-----------LVPLGFTS 102

Query: 75  AWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  +  + Q + +IT+   +LD +L GGI +  +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILEN 194
             GG  GKA+YID EG+F  +R +QIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 282

Query: 255 MALKLMKLAKKFNSAVVLLNQVTTKFAEGSF-----QLTLALGDSWSHSCTNRIIL-YWN 314
               L KLA +F  AVV+ NQV  +  +GS      Q     G+  +H+ T R+ L    
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQ-VDGSALFAGPQFKPIGGNIMAHATTTRLALRKGR 337

Query: 315 GDERYAYLEKSPSLRSASAPYSVTCRGI 334
            +ER   +  SP L  A A + ++  G+
Sbjct: 343 AEERICKVISSPCLPEAEARFQISTEGV 337

[Close]

BLAST of Carg06375 vs. TAIR10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3))

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19
Identity = 68/212 (32.08%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 70  NGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVN 129
           NG     ++L +     ++TT C  LD  L GGI+   +TEI    G GKTQL +QL++ 
Sbjct: 3   NGKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLC 62

Query: 130 VQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPK 189
            Q+P + GGL G ++Y+ +E  F   R  Q++       ++ S+    N  P        
Sbjct: 63  TQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP-------- 122

Query: 190 DILENIFYFRVCSYTEQIALVNYLDKFITEHK---DVKVIIVDSVTFHFRQNFD----DL 249
              +++F   V S      ++  +D F+   K    +K+I++DSV   FR  FD    DL
Sbjct: 123 --CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDL 182

Query: 250 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVT 275
             R+ L  +++ KL +LA KF+ A+V+ NQVT
Sbjct: 183 KKRSSLFFKISGKLKQLASKFDLAIVITNQVT 202

[Close]

BLAST of Carg06375 vs. TAIR10
Match: AT2G28560.1 (DNA repair (Rad51) family protein)

HSP 1 Score: 85.1 bits (209), Expect = 9.2e-17
Identity = 72/276 (26.09%), Postives = 121/276 (43.84%), Query Frame = 0


Query: 79  LHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGG 138
           +  E L   + T    LD+ L GGI    +TE+ G PGIGK+Q  ++LA++   P A+GG
Sbjct: 75  VENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGG 134

Query: 139 LGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYF 198
           L G+ +YID E  F   R +++      ++               ++   +++   I   
Sbjct: 135 LDGRVIYIDVESKFSSRRVIEMGLESFPEV-------------FHLKGMAQEMAGRILVL 194

Query: 199 RVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMK 258
           R  S       +  L   I +++ VK++++DS+T          A R   L      L  
Sbjct: 195 RPTSLANFTESIQELKNSILQNQ-VKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 254

Query: 259 LAKKFNSAVVLLNQVTT----KFAEGSFQ-----------------LTLALGDSWSHSCT 318
           LA+     +V+ NQV +    + ++ SFQ                 L  ALG +W+H+ T
Sbjct: 255 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 314

Query: 319 NRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGI 334
            R++L     +R   + KSP     + P+ +T  GI
Sbjct: 315 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGI 336

[Close]

BLAST of Carg06375 vs. Swiss-Prot
Match: sp|Q8GXF0|RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=1 SV=2)

HSP 1 Score: 506.5 bits (1303), Expect = 2.3e-142
Identity = 254/346 (73.41%), Postives = 305/346 (88.15%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I+  EAFE+LK A+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSC--- 81

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  -CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           Q+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVERA+QIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
            +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KFI+E+KDVKV+IVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS+SS+KR KM+
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

[Close]

BLAST of Carg06375 vs. Swiss-Prot
Match: sp|Q8R2J9|RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.2e-71
Identity = 149/349 (42.69%), Postives = 225/349 (64.47%), Query Frame = 0


Query: 2   EVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLDR 61
           E+   P+S T+R KL++AG+ T   +  V PS+L++E+ IS  EA E L+     S  D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  PDGSGAIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 121
           P  +GA V G + TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 181
           QL +QLAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +  + +       
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHL--HLIAGTHKDE 183

Query: 182 PHQVQIQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQ 241
            HQ  ++    ++IL +I+YFR   YTE +A V  L  F++ H  V+++I+D +   FR 
Sbjct: 184 EHQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCT 301
           + DDL+LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAAT 303

Query: 302 NRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS--TSSNKRTK 345
            R+I +W   +R+A L KSPS + ++ P+ +T +G R++  T+S+ +T+
Sbjct: 304 IRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

[Close]

BLAST of Carg06375 vs. Swiss-Prot
Match: sp|Q924H5|RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.4e-69
Identity = 143/344 (41.57%), Postives = 223/344 (64.83%), Query Frame = 0


Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLDRPDGSG 66
           P+S  +RGKL++AG+ T   +  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  -AIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
            ++ N   TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +  + +        HQ  
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHL--HLIAGTHTEEEHQKA 188

Query: 187 IQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 246
           ++    ++IL +I+YFR   YTE +A V  L  F+++H  V+++I+D + F FR + +DL
Sbjct: 189 LKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLEDL 248

Query: 247 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T R+I 
Sbjct: 249 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRLIF 308

Query: 307 YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS--TSSNKRTK 345
           +W   +R+A L KSPS + ++ P+ +T +G R++  T+++ +T+
Sbjct: 309 HWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

[Close]

BLAST of Carg06375 vs. Swiss-Prot
Match: sp|O43502|RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-65
Identity = 140/334 (41.92%), Postives = 208/334 (62.28%), Query Frame = 0


Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLDRPDGSG 66
           P+S  +R KL+SAG+ T   L  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAG 77

Query: 67  AIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
              +  + TA ++L +E     I T C+ LD++LGGG+   + TEI G PG+GKTQL +Q
Sbjct: 78  TSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQ 137

Query: 127 LAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +    +  K     H+  
Sbjct: 138 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHL--QLIAEKHKGEEHRKA 197

Query: 187 IQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 246
           ++     +IL +I+YFR   YTE +A V  L  F++EH  V+++IVD + F FR + DDL
Sbjct: 198 LEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDL 257

Query: 247 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA     AV+L NQ+TTK       L  ALG+SW H+ T R+I 
Sbjct: 258 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIF 317

Query: 307 YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 337
           +W+  +R A L KSPS +  +  + +  +G R++
Sbjct: 318 HWDRKQRLATLYKSPSQKECTVLFQIKPQGFRDT 349

[Close]

BLAST of Carg06375 vs. Swiss-Prot
Match: sp|Q54PJ7|RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51c PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-51
Identity = 107/250 (42.80%), Postives = 160/250 (64.00%), Query Frame = 0


Query: 88  ITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYID 147
           I T C+++D +L GG    ++TEI GVPGIGKT +  QL VN  IP   GG+ GKA+YID
Sbjct: 64  IITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYID 123

Query: 148 TEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQI 207
           TEGS+  +R  ++A   +  +    VL+K   T        + +L +I+Y+RV  Y E I
Sbjct: 124 TEGSYSCQRVREMATHLVNHLE--CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEII 183

Query: 208 ALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAV 267
           +L++ L  F+ ++KDVK+I+VDS+T+ FR +F D+ LRTR L  +A  LM +A ++N AV
Sbjct: 184 SLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYNLAV 243

Query: 268 VLLNQVTTKFAEGSFQLTLA--LGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAP 327
           V++NQVTTK +    +  L   LG+SW+H CT R++L+W   +R+ +L KSPS +S   P
Sbjct: 244 VVMNQVTTKISPNQKESILVPYLGESWTHICTYRMVLFWKQKQRFCHLYKSPSFKSCFTP 303

Query: 328 YSVTCRGIRN 336
           + +   GIR+
Sbjct: 304 FDIVEYGIRD 311

[Close]

BLAST of Carg06375 vs. TrEMBL
Match: tr|A0A0A0L3U2|A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 2.5e-178
Identity = 321/346 (92.77%), Postives = 335/346 (96.82%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF+VLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]

BLAST of Carg06375 vs. TrEMBL
Match: tr|A0A1S3AWE4|A0A1S3AWE4_CUCME (DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 4.3e-178
Identity = 321/346 (92.77%), Postives = 337/346 (97.40%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFEVLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKF+ AVVL NQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 346

[Close]

BLAST of Carg06375 vs. TrEMBL
Match: tr|A0A1S3AVR1|A0A1S3AVR1_CUCME (DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 5.3e-176
Identity = 321/353 (90.93%), Postives = 337/353 (95.47%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFEVLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA-------VVLLNQVTTKFAEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKF+ A       VVL NQVTTKFAEGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           HSCTNRIILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 353

[Close]

BLAST of Carg06375 vs. TrEMBL
Match: tr|A0A1S4DSI5|A0A1S4DSI5_CUCME (DNA repair protein RAD51 homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 3.2e-173
Identity = 319/353 (90.37%), Postives = 335/353 (94.90%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFEVLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYI  EGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA-------VVLLNQVTTKFAEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKF+ A       VVL NQVTTKFAEGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           HSCTNRIILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 351

[Close]

BLAST of Carg06375 vs. TrEMBL
Match: tr|A0A1S4DSG8|A0A1S4DSG8_CUCME (DNA repair protein RAD51 homolog 3 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 2.4e-160
Identity = 299/353 (84.70%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60
           MEVGRLPISATL                        RELEISNNEAFEVLK ASHG  LD
Sbjct: 1   MEVGRLPISATL------------------------RELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA-------VVLLNQVTTKFAEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKF+ A       VVL NQVTTKFAEGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           HSCTNRIILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 329

The following BLAST results are available for this feature:

BLAST of Carg06375 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944720.1	4.8e-189	99.71	DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita moschata]	[more]
XP_023540197.1	2.6e-187	98.55	DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022944702.1	3.4e-187	98.29	DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita moschata]	[more]
XP_022974137.1	3.4e-187	98.55	DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita maxima]	[more]
XP_022944729.1	2.9e-186	99.13	DNA repair protein RAD51 homolog 3 isoform X4 [Cucurbita moschata]	[more]

BLAST of Carg06375 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45280.2	2.5e-139	68.65	RAS associated with diabetes protein 51C	[more]
AT3G22880.1	6.1e-29	35.38	DNA repair (Rad51) family protein	[more]
AT5G20850.1	6.6e-23	29.27	RAS associated with diabetes protein 51	[more]
AT5G57450.1	1.5e-19	32.08	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT2G28560.1	9.2e-17	26.09	DNA repair (Rad51) family protein	[more]

BLAST of Carg06375 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GXF0\|RA51C_ARATH	2.3e-142	73.41	DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=...	[more]
sp\|Q8R2J9\|RA51C_CRIGR	6.2e-71	42.69	DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2...	[more]
sp\|Q924H5\|RA51C_MOUSE	4.4e-69	41.57	DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1	[more]
sp\|O43502\|RA51C_HUMAN	1.3e-65	41.92	DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1	[more]
sp\|Q54PJ7\|RA51C_DICDI	1.4e-51	42.80	DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51...	[more]

BLAST of Carg06375 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3U2\|A0A0A0L3U2_CUCSA	2.5e-178	92.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126250 PE=4 SV=1	[more]
tr\|A0A1S3AWE4\|A0A1S3AWE4_CUCME	4.3e-178	92.77	DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1S3AVR1\|A0A1S3AVR1_CUCME	5.3e-176	90.93	DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1S4DSI5\|A0A1S4DSI5_CUCME	3.2e-173	90.37	DNA repair protein RAD51 homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1S4DSG8\|A0A1S4DSG8_CUCME	2.4e-160	84.70	DNA repair protein RAD51 homolog 3 isoform X4 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0008094	DNA-dependent ATPase activity
GO:0005524	ATP binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR010995	DNA_repair_Rad51/TF_NusA_a-hlx
IPR033925	Rad51_DMC1_RadA
IPR020588	RecA_ATP-bd
IPR016467	DNA_recomb/repair_RecA-like
IPR013632	DNA_recomb/repair_Rad51_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008094	DNA-dependent ATPase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06375-RA	Carg06375-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 71..335 e-value: 9.1E-47 score: 159.4
None	No IPR available	GENE3D	G3DSA:1.10.150.20		coord: 11..55 e-value: 4.1E-6 score: 28.7
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 71..345 e-value: 8.2E-74 score: 250.3
None	No IPR available	PANTHER	PTHR22942:SF14	DNA REPAIR PROTEIN RAD51 HOMOLOG 3	coord: 13..340
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 13..340
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 1..339 e-value: 4.5E-93 score: 309.8
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 84..273 score: 56.179
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 88..334 e-value: 4.84127E-95 score: 284.091
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	SSF47794	Rad51 N-terminal domain-like	coord: 6..54
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 86..334

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06375	Cla021319	Watermelon (97103) v1	carwmB0961
Carg06375	Csa3G126250	Cucumber (Chinese Long) v2	carcuB0975
Carg06375	MELO3C006201	Melon (DHL92) v3.5.1	carmeB0941
Carg06375	ClCG05G002360	Watermelon (Charleston Gray)	carwcgB0935
Carg06375	CSPI03G09670	Wild cucumber (PI 183967)	carcpiB0998
Carg06375	Cucsa.257540	Cucumber (Gy14) v1	carcgyB1077
Carg06375	CmaCh06G011430	Cucurbita maxima (Rimu)	carcmaB1325
Carg06375	CmoCh06G011690	Cucurbita moschata (Rifu)	carcmoB1288
Carg06375	Lsi05G019490	Bottle gourd (USVL1VR-Ls)	carlsiB878
Carg06375	Cp4.1LG08g02080	Cucurbita pepo (Zucchini)	carcpeB1333
Carg06375	CsGy3G009760	Cucumber (Gy14) v2	carcgybB0948
Carg06375	MELO3C006201.2	Melon (DHL92) v3.6.1	carmedB0947
Carg06375	CsaV3_3G009800	Cucumber (Chinese Long) v3	carcucB1003
Carg06375	Cla97C05G082870	Watermelon (97103) v2	carwmbB1008
Carg06375	Bhi01G000176	Wax gourd	carwgoB1117

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06375	Silver-seed gourd	carcarB266
Carg06375	Silver-seed gourd	carcarB549
Carg06375	Cucumber (Gy14) v2	carcgybB0949
Carg06375	Cucumber (Gy14) v1	carcgyB1079
Carg06375	Cucurbita maxima (Rimu)	carcmaB1320
Carg06375	Cucurbita maxima (Rimu)	carcmaB1321
Carg06375	Cucurbita moschata (Rifu)	carcmoB1284
Carg06375	Cucurbita moschata (Rifu)	carcmoB1285
Carg06375	Cucurbita pepo (Zucchini)	carcpeB1328
Carg06375	Cucurbita pepo (Zucchini)	carcpeB1331
Carg06375	Wild cucumber (PI 183967)	carcpiB0999
Carg06375	Cucumber (Chinese Long) v2	carcuB0976
Carg06375	Cucumber (Chinese Long) v3	carcucB1004
Carg06375	Bottle gourd (USVL1VR-Ls)	carlsiB875
Carg06375	Melon (DHL92) v3.5.1	carmeB0938
Carg06375	Melon (DHL92) v3.6.1	carmedB0944
Carg06375	Watermelon (Charleston Gray)	carwcgB0937
Carg06375	Watermelon (97103) v1	carwmB0963
Carg06375	Watermelon (97103) v2	carwmbB1010
Carg06375	Wax gourd	carwgoB1113